Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:53:40 (2578629): wrapper (7.7.26015): starting
01:53:40 (2578629): wrapper: running run_atlas (--nthreads 8)
[2025-11-29 01:53:40] Arguments: --nthreads 8
[2025-11-29 01:53:40] Threads: 8
[2025-11-29 01:53:40] Checking for CVMFS
[2025-11-29 01:53:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 01:53:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 01:53:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 01:53:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 01:53:41] 2.11.3.0 1215219 32549 198924 153437 1 438 43967305 45568000 14630 130560 0 194427229 99.794 126744693 22231 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-29 01:53:41] CVMFS is ok
[2025-11-29 01:53:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 01:53:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 01:53:41] Further information can be found at the LHC@home message board.
[2025-11-29 01:53:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 01:53:41] Checking for apptainer binary...
[2025-11-29 01:53:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 01:53:41] Running /usr/bin/apptainer --version
[2025-11-29 01:53:42] apptainer version 1.4.1-1.el9
[2025-11-29 01:53:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 01:53:43] wns0018.triumf.lcg
[2025-11-29 01:53:43] apptainer works
[2025-11-29 01:53:43] Set ATHENA_PROC_NUMBER=8
[2025-11-29 01:53:43] Set ATHENA_CORE_NUMBER=8
[2025-11-29 01:53:43] Starting ATLAS job with PandaID=6896764795
[2025-11-29 01:53:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 02:03:36]  *** The last 200 lines of the pilot log: ***
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | WARNING  | wrong length of table data, x=[1764410161.0, 1764410222.0, 1764410283.0, 1764410344.0, 1764410405.0], y=[1402.0, 237774.0, 593602.0, 893907.0, 675542.0] (must be s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | ..............................
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . Timing measurements:
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . get job = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . initial setup = 4 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . payload setup = 36 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . stage-in = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . payload execution = 306 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . stage-out = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . log creation = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | ..............................
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896764795/pilotlog.txt
[2025-11-29 02:03:36] 2025-11-29 10:03:01,631 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-29 02:03:36] - Log from pilotlog.txt -
[2025-11-29 02:03:36] 2025-11-29 10:03:01,582 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896764795/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 02:03:36] 2025-11-29 10:03:01,582 | INFO     | extracted standard info from prmon json
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | WARNING  | wrong length of table data, x=[1764410161.0, 1764410222.0, 1764410283.0, 1764410344.0, 1764410405.0], y=[1402.0, 237774.0, 593602.0, 893907.0, 675542.0] (must be s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | ..............................
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . Timing measurements:
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . get job = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . initial setup = 4 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . payload setup = 36 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . stage-in = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . payload execution = 306 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . stage-out = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . log creation = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | ..............................
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896764795/pilotlog.txt
[2025-11-29 02:03:36] 2025-11-29 10:03:01,631 | WARNING  | 
[2025-11-29 02:03:36] [begin log extracts]
[2025-11-29 02:03:36] - Log from pilotlog.txt -
[2025-11-29 02:03:36] 2025-11-29 10:03:01,582 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896764795/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 02:03:36] 2025-11-29 10:03:01,582 | INFO     | extracted standard info from prmon json
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 02:03:36] 2025-11-29 10:03:01,583 | WARNING  | wrong length of table data, x=[1764410161.0, 1764410222.0, 1764410283.0, 1764410344.0, 1764410405.0], y=[1402.0, 237774.0, 593602.0, 893907.0, 675542.0] (must be s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | ..............................
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . Timing measurements:
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . get job = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . initial setup = 4 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,584 | INFO     | . payload setup = 36 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . stage-in = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . payload execution = 306 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . stage-out = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | . log creation = 0 s
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | ..............................
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 02:03:36] 2025-11-29 10:03:01,585 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896764795/pilotlog.txt
[2025-11-29 02:03:36] [end log extracts]
[2025-11-29 02:03:36] 2025-11-29 10:03:01,632 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-29 02:03:36] 2025-11-29 10:03:01,632 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-29 02:03:36] 2025-11-29 10:03:02,160 | INFO     | 
[2025-11-29 02:03:36] 2025-11-29 10:03:02,160 | INFO     | job summary report
[2025-11-29 02:03:36] 2025-11-29 10:03:02,160 | INFO     | --------------------------------------------------
[2025-11-29 02:03:36] 2025-11-29 10:03:02,160 | INFO     | PanDA job id: 6896764795
[2025-11-29 02:03:36] 2025-11-29 10:03:02,160 | INFO     | task id: 47530783
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-29 02:00:41,766 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | pilot state: failed 
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | transexitcode: 65
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | exeerrorcode: 65
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | exitcode: 65
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | cpuconsumptiontime: 74 s
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | nevents: 0
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | neventsw: 0
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | pid: 2590403
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | pgrp: 2590403
[2025-11-29 02:03:36] 2025-11-29 10:03:02,161 | INFO     | corecount: 8
[2025-11-29 02:03:36] 2025-11-29 10:03:02,162 | INFO     | event service: False
[2025-11-29 02:03:36] 2025-11-29 10:03:02,162 | INFO     | sizes: {0: 2284272, 1: 2284471, 11: 2284471, 14: 2284761, 22: 2284789, 347: 2306303, 349: 2310593, 350: 2310649, 482: 2310843}
[2025-11-29 02:03:36] 2025-11-29 10:03:02,162 | INFO     | --------------------------------------------------
[2025-11-29 02:03:36] 2025-11-29 10:03:02,162 | INFO     | 
[2025-11-29 02:03:36] 2025-11-29 10:03:02,167 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-29 02:03:36] 2025-11-29 10:03:02,280 | INFO     | time since job start (519s) is within the limit (172800.0s)
[2025-11-29 02:03:36] 2025-11-29 10:03:02,290 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,290 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,290 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,290 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,291 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 02:03:36] 2025-11-29 10:03:02,292 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,292 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 02:03:36] 2025-11-29 10:03:02,292 | INFO     | job 6896764795 has completed (purged errors)
[2025-11-29 02:03:36] 2025-11-29 10:03:02,292 | INFO     | overall cleanup function is called
[2025-11-29 02:03:36] 2025-11-29 10:03:03,304 | INFO     | --- collectZombieJob: --- 10, [2590403]
[2025-11-29 02:03:36] 2025-11-29 10:03:03,304 | INFO     | zombie collector waiting for pid 2590403
[2025-11-29 02:03:36] 2025-11-29 10:03:03,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 02:03:36] 2025-11-29 10:03:03,304 | INFO     | collected zombie processes
[2025-11-29 02:03:36] 2025-11-29 10:03:03,304 | INFO     | will attempt to kill all subprocesses of pid=2590403
[2025-11-29 02:03:36] 2025-11-29 10:03:03,584 | INFO     | process IDs to be killed: [2590403] (in reverse order)
[2025-11-29 02:03:36] 2025-11-29 10:03:03,778 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 02:03:36] 2025-11-29 10:03:03,779 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 02:03:36] 2025-11-29 10:03:03,867 | INFO     | did not find any defunct processes belonging to 2590403
[2025-11-29 02:03:36] 2025-11-29 10:03:03,887 | INFO     | did not find any defunct processes belonging to 2590403
[2025-11-29 02:03:36] 2025-11-29 10:03:03,888 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 02:03:36] 2025-11-29 10:03:03,888 | INFO     | ready for new job
[2025-11-29 02:03:36] 2025-11-29 10:03:03,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 02:03:36] 2025-11-29 10:03:03,913 | INFO     | ***************************************
[2025-11-29 02:03:36] 2025-11-29 10:03:03,913 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 02:03:36] 2025-11-29 10:03:03,913 | INFO     | ***************************************
[2025-11-29 02:03:36] 2025-11-29 10:03:03,913 | INFO     | 
[2025-11-29 02:03:36] 2025-11-29 10:03:03,915 | INFO     | architecture information:
[2025-11-29 02:03:36] 2025-11-29 10:03:03,915 | INFO     | executing command: cat /etc/os-release
[2025-11-29 02:03:36] 2025-11-29 10:03:03,926 | INFO     | cat /etc/os-release:
[2025-11-29 02:03:36] NAME="CentOS Linux"
[2025-11-29 02:03:36] VERSION="7 (Core)"
[2025-11-29 02:03:36] ID="centos"
[2025-11-29 02:03:36] ID_LIKE="rhel fedora"
[2025-11-29 02:03:36] VERSION_ID="7"
[2025-11-29 02:03:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 02:03:36] ANSI_COLOR="0;31"
[2025-11-29 02:03:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 02:03:36] HOME_URL="https://www.centos.org/"
[2025-11-29 02:03:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 02:03:36] 
[2025-11-29 02:03:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 02:03:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 02:03:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 02:03:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 02:03:36] 
[2025-11-29 02:03:36] 2025-11-29 10:03:03,927 | INFO     | ***************************************
[2025-11-29 02:03:36] 2025-11-29 10:03:04,437 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-29 02:03:36] 2025-11-29 10:03:04,512 | INFO     | sufficient remaining disk space (1240515739648 B)
[2025-11-29 02:03:36] 2025-11-29 10:03:04,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 02:03:36] 2025-11-29 10:03:04,513 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 02:03:36] 2025-11-29 10:03:04,513 | INFO     | update_server=False
[2025-11-29 02:03:36] 2025-11-29 10:03:04,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 02:03:36] 2025-11-29 10:03:04,718 | INFO     | all payload control threads have been joined
[2025-11-29 02:03:36] 2025-11-29 10:03:05,287 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 02:03:36] 2025-11-29 10:03:05,287 | INFO     | aborting loop
[2025-11-29 02:03:36] 2025-11-29 10:03:05,487 | INFO     | all data control threads have been joined
[2025-11-29 02:03:36] 2025-11-29 10:03:05,518 | INFO     | [job] retrieve thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:05,643 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:05,693 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 02:03:36] 2025-11-29 10:03:05,723 | INFO     | [payload] control thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:06,130 | INFO     | all job control threads have been joined
[2025-11-29 02:03:36] 2025-11-29 10:03:06,290 | INFO     | [payload] validate_post thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:06,293 | INFO     | [job] job monitor thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:06,436 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:06,436 | INFO     | [data] copytool_in thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:06,482 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:06,493 | INFO     | [data] control thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:06,513 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:06,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 02:03:36] 2025-11-29 10:03:06,872 | INFO     | [job] validate thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:06,926 | INFO     | [payload] failed_post thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:07,136 | INFO     | [job] control thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:07,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 02:03:36] 2025-11-29 10:03:07,702 | INFO     | [data] copytool_out thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:08,181 | INFO     | [job] queue monitor thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:10,773 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 02:03:36] 2025-11-29 10:03:23,313 | INFO     | [monitor] cgroup control has ended
[2025-11-29 02:03:36] 2025-11-29 10:03:23,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247507724096)>', '<ExcThread(monitor, started 140246964487936)>']
[2025-11-29 02:03:36] 2025-11-29 10:03:28,500 | INFO     | all workflow threads have been joined
[2025-11-29 02:03:36] 2025-11-29 10:03:28,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 02:03:36] 2025-11-29 10:03:28,500 | INFO     | traces error code: 0
[2025-11-29 02:03:36] 2025-11-29 10:03:28,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 02:03:36] 2025-11-29 10:03:36,025 | INFO     | PID=2582911 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 02:03:36] 2025-11-29 10:03:36,025 | INFO     | .. there are 26 such processes running
[2025-11-29 02:03:36] 2025-11-29 10:03:36,026 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 02:03:36] 2025-11-29 10:03:36,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 02:03:36] 2025-11-29 10:03:36,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 02:03:36] 2025-11-29 10:03:36,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 02:03:36] 2025-11-29 10:03:36,026 | INFO     | [monitor] control thread has ended
[2025-11-29 02:03:36] 2025-11-29 10:03:36,207 [wrapper] ==== pilot stdout END ====
[2025-11-29 02:03:36] 2025-11-29 10:03:36,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 02:03:36] 2025-11-29 10:03:36,212 [wrapper] pilotpid: 2582911
[2025-11-29 02:03:36] 2025-11-29 10:03:36,214 [wrapper] Pilot exit status: 0
[2025-11-29 02:03:36] 2025-11-29 10:03:36,228 [wrapper] pandaids: 6896764795
[2025-11-29 02:03:36] 2025-11-29 10:03:36,265 [wrapper] cleanup supervisor_pilot 2582917 2582912
[2025-11-29 02:03:36] 2025-11-29 10:03:36,267 [wrapper] Test setup, not cleaning
[2025-11-29 02:03:36] 2025-11-29 10:03:36,269 [wrapper] apfmon messages muted
[2025-11-29 02:03:36] 2025-11-29 10:03:36,270 [wrapper] ==== wrapper stdout END ====
[2025-11-29 02:03:36] 2025-11-29 10:03:36,272 [wrapper] ==== wrapper stderr END ====
[2025-11-29 02:03:36]  *** Error codes and diagnostics ***
[2025-11-29 02:03:36]     "exeErrorCode": 65,
[2025-11-29 02:03:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-29 02:03:36]     "pilotErrorCode": 1305,
[2025-11-29 02:03:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-29 02:03:36]  *** Listing of results directory ***
[2025-11-29 02:03:36] total 372564
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc    576529 Nov 28 02:28 pilot3.tar.gz
[2025-11-29 02:03:36] -rwx------. 1 boinc boinc     36292 Nov 28 02:31 runpilot2-wrapper.sh
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc      5112 Nov 28 02:33 queuedata.json
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc       100 Nov 29 01:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 02:03:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 01:53 run_atlas
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc       105 Nov 29 01:53 job.xml
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc      6446 Nov 29 01:53 init_data.xml
[2025-11-29 02:03:36] -rw-r--r--. 2 boinc boinc 377228930 Nov 29 01:53 EVNT.47530775._000002.pool.root.1
[2025-11-29 02:03:36] -rw-r--r--. 2 boinc boinc     15847 Nov 29 01:53 start_atlas.sh
[2025-11-29 02:03:36] drwxrwx--x. 2 boinc boinc      4096 Nov 29 01:53 shared
[2025-11-29 02:03:36] -rw-r--r--. 2 boinc boinc    590122 Nov 29 01:53 input.tar.gz
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc         0 Nov 29 01:53 boinc_lockfile
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc      2877 Nov 29 01:53 pandaJob.out
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc    991834 Nov 29 01:54 agis_schedconf.cvmfs.json
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc   1516240 Nov 29 01:54 agis_ddmendpoints.agis.ALL.json
[2025-11-29 02:03:36] drwx------. 5 boinc boinc      4096 Nov 29 01:54 pilot3
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc       525 Nov 29 02:00 boinc_task_state.xml
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc      1001 Nov 29 02:00 memory_monitor_summary.json
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc     53415 Nov 29 02:00 log.47530783._000017.job.log.tgz.1
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc      9253 Nov 29 02:03 heartbeat.json
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc      8192 Nov 29 02:03 boinc_mmap_file
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc        23 Nov 29 02:03 wrapper_checkpoint.txt
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc        95 Nov 29 02:03 pilot_heartbeat.json
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc       823 Nov 29 02:03 pilotlog.txt
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc    129926 Nov 29 02:03 log.47530783._000017.job.log.1
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc       186 Nov 29 02:03 output.list
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc       620 Nov 29 02:03 runtime_log
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc    204800 Nov 29 02:03 result.tar.gz
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc      8634 Nov 29 02:03 runtime_log.err
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc       647 Nov 29 02:03 6mLMDmAwAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfMLKDmkJUcKo.diag
[2025-11-29 02:03:36] -rw-r--r--. 1 boinc boinc     21959 Nov 29 02:03 stderr.txt
[2025-11-29 02:03:36] No HITS result produced
[2025-11-29 02:03:36]  *** Contents of shared directory: ***
[2025-11-29 02:03:36] total 369188
[2025-11-29 02:03:36] -rw-r--r--. 2 boinc boinc 377228930 Nov 29 01:53 ATLAS.root_0
[2025-11-29 02:03:36] -rw-r--r--. 2 boinc boinc     15847 Nov 29 01:53 start_atlas.sh
[2025-11-29 02:03:36] -rw-r--r--. 2 boinc boinc    590122 Nov 29 01:53 input.tar.gz
[2025-11-29 02:03:36] -rw-------. 1 boinc boinc    204800 Nov 29 02:03 result.tar.gz
02:03:38 (2578629): run_atlas exited; CPU time 81.031393
02:03:38 (2578629): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN