Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:25:54 (3999750): wrapper (7.7.26015): starting
01:25:54 (3999750): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 01:25:54] Arguments: --nthreads 12
[2025-11-29 01:25:54] Threads: 12
[2025-11-29 01:25:54] Checking for CVMFS
[2025-11-29 01:25:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 01:25:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 01:25:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 01:25:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 01:25:56] 2.11.5.0 285088 32238 219236 153437 0 112 24651369 45568000 19635 130560 0 283110420 99.757 202204295 30683 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-29 01:25:56] CVMFS is ok
[2025-11-29 01:25:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 01:25:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 01:25:56] Further information can be found at the LHC@home message board.
[2025-11-29 01:25:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 01:25:56] Checking for apptainer binary...
[2025-11-29 01:25:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 01:25:56] Running /usr/bin/apptainer --version
[2025-11-29 01:25:57] apptainer version 1.4.1-1.el9
[2025-11-29 01:25:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 01:25:57] wns0079.triumf.lcg
[2025-11-29 01:25:57] apptainer works
[2025-11-29 01:25:57] Set ATHENA_PROC_NUMBER=12
[2025-11-29 01:25:57] Set ATHENA_CORE_NUMBER=12
[2025-11-29 01:25:58] Starting ATLAS job with PandaID=6897488238
[2025-11-29 01:25:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 01:38:13]  *** The last 200 lines of the pilot log: ***
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | WARNING  | wrong length of table data, x=[1764408621.0, 1764408682.0, 1764408743.0, 1764408804.0, 1764408865.0], y=[2003.0, 242130.0, 795223.0, 525582.0, 224600.0] (must be s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | could have reported an average CPU frequency of 2687 MHz (4 samples)
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | ..............................
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | . Timing measurements:
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | . get job = 0 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . initial setup = 3 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . payload setup = 75 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . stage-in = 0 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . payload execution = 296 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . stage-out = 1 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . log creation = 0 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | ..............................
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897488238/pilotlog.txt
[2025-11-29 01:38:13] 2025-11-29 09:37:17,644 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-29 01:38:13] - Log from pilotlog.txt -
[2025-11-29 01:38:13] 2025-11-29 09:37:17,618 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897488238/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | INFO     | extracted standard info from prmon json
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | WARNING  | wrong length of table data, x=[1764408621.0, 1764408682.0, 1764408743.0, 1764408804.0, 1764408865.0], y=[2003.0, 242130.0, 795223.0, 525582.0, 224600.0] (must be s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | could have reported an average CPU frequency of 2687 MHz (4 samples)
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | ..............................
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | . Timing measurements:
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | . get job = 0 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . initial setup = 3 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . payload setup = 75 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . stage-in = 0 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . payload execution = 296 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . stage-out = 1 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . log creation = 0 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | ..............................
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897488238/pilotlog.txt
[2025-11-29 01:38:13] 2025-11-29 09:37:17,644 | WARNING  | 
[2025-11-29 01:38:13] [begin log extracts]
[2025-11-29 01:38:13] - Log from pilotlog.txt -
[2025-11-29 01:38:13] 2025-11-29 09:37:17,618 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897488238/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | INFO     | extracted standard info from prmon json
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 01:38:13] 2025-11-29 09:37:17,619 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | WARNING  | wrong length of table data, x=[1764408621.0, 1764408682.0, 1764408743.0, 1764408804.0, 1764408865.0], y=[2003.0, 242130.0, 795223.0, 525582.0, 224600.0] (must be s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | could have reported an average CPU frequency of 2687 MHz (4 samples)
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | ..............................
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | . Timing measurements:
[2025-11-29 01:38:13] 2025-11-29 09:37:17,620 | INFO     | . get job = 0 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . initial setup = 3 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . payload setup = 75 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . stage-in = 0 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . payload execution = 296 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . stage-out = 1 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | . log creation = 0 s
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | ..............................
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 01:38:13] 2025-11-29 09:37:17,621 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897488238/pilotlog.txt
[2025-11-29 01:38:13] [end log extracts]
[2025-11-29 01:38:13] 2025-11-29 09:37:17,644 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-29 01:38:13] 2025-11-29 09:37:17,645 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | 
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | job summary report
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | --------------------------------------------------
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | PanDA job id: 6897488238
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | task id: 47538113
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-29 01:34:24,227 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | pilot state: failed 
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | transexitcode: 65
[2025-11-29 01:38:13] 2025-11-29 09:37:18,264 | INFO     | exeerrorcode: 65
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | exitcode: 65
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | cpuconsumptiontime: 64 s
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | nevents: 0
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | neventsw: 0
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | pid: 4011946
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | pgrp: 4011946
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | corecount: 12
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | event service: False
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | sizes: {0: 2283626, 1: 2284308, 2: 2284507, 13: 2284507, 24: 2284563, 35: 2284591, 43: 2285009, 46: 2285037, 376: 2308699, 377: 2308703, 379: 2313049, 380: 2313385
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | --------------------------------------------------
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | 
[2025-11-29 01:38:13] 2025-11-29 09:37:18,265 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-29 01:38:13] 2025-11-29 09:37:18,426 | INFO     | time since job start (613s) is within the limit (172800.0s)
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,475 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 01:38:13] 2025-11-29 09:37:18,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 01:38:13] 2025-11-29 09:37:18,475 | INFO     | job 6897488238 has completed (purged errors)
[2025-11-29 01:38:13] 2025-11-29 09:37:18,475 | INFO     | overall cleanup function is called
[2025-11-29 01:38:13] 2025-11-29 09:37:19,492 | INFO     | --- collectZombieJob: --- 10, [4011946]
[2025-11-29 01:38:13] 2025-11-29 09:37:19,492 | INFO     | zombie collector waiting for pid 4011946
[2025-11-29 01:38:13] 2025-11-29 09:37:19,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 01:38:13] 2025-11-29 09:37:19,492 | INFO     | collected zombie processes
[2025-11-29 01:38:13] 2025-11-29 09:37:19,492 | INFO     | will attempt to kill all subprocesses of pid=4011946
[2025-11-29 01:38:13] 2025-11-29 09:37:19,982 | INFO     | process IDs to be killed: [4011946] (in reverse order)
[2025-11-29 01:38:13] 2025-11-29 09:37:20,242 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 01:38:13] 2025-11-29 09:37:20,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 01:38:13] 2025-11-29 09:37:20,274 | INFO     | did not find any defunct processes belonging to 4011946
[2025-11-29 01:38:13] 2025-11-29 09:37:20,294 | INFO     | did not find any defunct processes belonging to 4011946
[2025-11-29 01:38:13] 2025-11-29 09:37:20,294 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 01:38:13] 2025-11-29 09:37:20,295 | INFO     | ready for new job
[2025-11-29 01:38:13] 2025-11-29 09:37:20,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 01:38:13] 2025-11-29 09:37:20,296 | INFO     | ***************************************
[2025-11-29 01:38:13] 2025-11-29 09:37:20,305 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 01:38:13] 2025-11-29 09:37:20,305 | INFO     | ***************************************
[2025-11-29 01:38:13] 2025-11-29 09:37:20,305 | INFO     | 
[2025-11-29 01:38:13] 2025-11-29 09:37:20,307 | INFO     | architecture information:
[2025-11-29 01:38:13] 2025-11-29 09:37:20,307 | INFO     | executing command: cat /etc/os-release
[2025-11-29 01:38:13] 2025-11-29 09:37:20,352 | INFO     | cat /etc/os-release:
[2025-11-29 01:38:13] NAME="CentOS Linux"
[2025-11-29 01:38:13] VERSION="7 (Core)"
[2025-11-29 01:38:13] ID="centos"
[2025-11-29 01:38:13] ID_LIKE="rhel fedora"
[2025-11-29 01:38:13] VERSION_ID="7"
[2025-11-29 01:38:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 01:38:13] ANSI_COLOR="0;31"
[2025-11-29 01:38:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 01:38:13] HOME_URL="https://www.centos.org/"
[2025-11-29 01:38:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 01:38:13] 
[2025-11-29 01:38:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 01:38:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 01:38:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 01:38:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 01:38:13] 
[2025-11-29 01:38:13] 2025-11-29 09:37:20,352 | INFO     | ***************************************
[2025-11-29 01:38:13] 2025-11-29 09:37:20,856 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-29 01:38:13] 2025-11-29 09:37:20,879 | INFO     | sufficient remaining disk space (2099262783488 B)
[2025-11-29 01:38:13] 2025-11-29 09:37:20,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 01:38:13] 2025-11-29 09:37:20,880 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 01:38:13] 2025-11-29 09:37:20,880 | INFO     | update_server=False
[2025-11-29 01:38:13] 2025-11-29 09:37:20,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 01:38:13] 2025-11-29 09:37:20,880 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 01:38:13] 2025-11-29 09:37:20,880 | INFO     | aborting loop
[2025-11-29 01:38:13] 2025-11-29 09:37:20,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 01:38:13] 2025-11-29 09:37:21,271 | INFO     | all data control threads have been joined
[2025-11-29 01:38:13] 2025-11-29 09:37:21,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 01:38:13] 2025-11-29 09:37:21,711 | INFO     | all payload control threads have been joined
[2025-11-29 01:38:13] 2025-11-29 09:37:21,886 | INFO     | [job] retrieve thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:21,886 | INFO     | [job] job monitor thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:22,030 | INFO     | [data] copytool_in thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:22,246 | INFO     | [payload] failed_post thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:22,277 | INFO     | [data] control thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:22,337 | INFO     | all job control threads have been joined
[2025-11-29 01:38:13] 2025-11-29 09:37:22,717 | INFO     | [payload] control thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:22,983 | INFO     | [data] copytool_out thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:22,989 | INFO     | [payload] validate_post thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:23,028 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 01:38:13] 2025-11-29 09:37:23,251 | INFO     | [job] validate thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:23,343 | INFO     | [job] control thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:23,367 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:23,367 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:23,367 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:23,368 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:24,034 | INFO     | [job] queue monitor thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:25,715 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 01:38:13] 2025-11-29 09:37:52,649 | INFO     | PID=4003739 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 01:38:13] 2025-11-29 09:37:52,650 | INFO     | .. there are 42 such processes running
[2025-11-29 01:38:13] 2025-11-29 09:37:52,651 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 01:38:13] 2025-11-29 09:37:52,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 01:38:13] 2025-11-29 09:37:52,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 01:38:13] 2025-11-29 09:38:06,450 | INFO     | [monitor] cgroup control has ended
[2025-11-29 01:38:13] 2025-11-29 09:38:06,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825075676992)>', '<ExcThread(monitor, started 139824755349248)>']
[2025-11-29 01:38:13] 2025-11-29 09:38:07,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 01:38:13] 2025-11-29 09:38:07,743 | INFO     | [monitor] control thread has ended
[2025-11-29 01:38:13] 2025-11-29 09:38:11,967 | INFO     | all workflow threads have been joined
[2025-11-29 01:38:13] 2025-11-29 09:38:11,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 01:38:13] 2025-11-29 09:38:11,967 | INFO     | traces error code: 0
[2025-11-29 01:38:13] 2025-11-29 09:38:11,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 01:38:13] 2025-11-29 09:38:12,404 [wrapper] ==== pilot stdout END ====
[2025-11-29 01:38:13] 2025-11-29 09:38:12,461 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 01:38:13] 2025-11-29 09:38:12,501 [wrapper] pilotpid: 4003739
[2025-11-29 01:38:13] 2025-11-29 09:38:12,552 [wrapper] Pilot exit status: 0
[2025-11-29 01:38:13] 2025-11-29 09:38:12,681 [wrapper] pandaids: 6897488238
[2025-11-29 01:38:13] 2025-11-29 09:38:13,112 [wrapper] cleanup supervisor_pilot 4003747 4003740
[2025-11-29 01:38:13] 2025-11-29 09:38:13,141 [wrapper] Test setup, not cleaning
[2025-11-29 01:38:13] 2025-11-29 09:38:13,205 [wrapper] apfmon messages muted
[2025-11-29 01:38:13] 2025-11-29 09:38:13,232 [wrapper] ==== wrapper stdout END ====
[2025-11-29 01:38:13] 2025-11-29 09:38:13,301 [wrapper] ==== wrapper stderr END ====
[2025-11-29 01:38:13]  *** Error codes and diagnostics ***
[2025-11-29 01:38:13]     "exeErrorCode": 65,
[2025-11-29 01:38:13]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-29 01:38:13]     "pilotErrorCode": 1305,
[2025-11-29 01:38:13]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-29 01:38:13]  *** Listing of results directory ***
[2025-11-29 01:38:14] total 375016
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc    576529 Nov 28 02:28 pilot3.tar.gz
[2025-11-29 01:38:14] -rwx------. 1 boinc boinc     36292 Nov 28 02:29 runpilot2-wrapper.sh
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc      5112 Nov 28 02:32 queuedata.json
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc       100 Nov 29 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 01:38:14] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 01:25 run_atlas
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc       105 Nov 29 01:25 job.xml
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc      6595 Nov 29 01:25 init_data.xml
[2025-11-29 01:38:14] -rw-r--r--. 2 boinc boinc 379715323 Nov 29 01:25 EVNT.47528871._000172.pool.root.1
[2025-11-29 01:38:14] -rw-r--r--. 2 boinc boinc     15847 Nov 29 01:25 start_atlas.sh
[2025-11-29 01:38:14] drwxrwx--x. 2 boinc boinc      4096 Nov 29 01:25 shared
[2025-11-29 01:38:14] -rw-r--r--. 2 boinc boinc    590128 Nov 29 01:25 input.tar.gz
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc         0 Nov 29 01:25 boinc_lockfile
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc      2881 Nov 29 01:25 pandaJob.out
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc    991834 Nov 29 01:27 agis_schedconf.cvmfs.json
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc   1516240 Nov 29 01:27 agis_ddmendpoints.agis.ALL.json
[2025-11-29 01:38:14] drwx------. 5 boinc boinc      4096 Nov 29 01:27 pilot3
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc       525 Nov 29 01:34 boinc_task_state.xml
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc      1009 Nov 29 01:34 memory_monitor_summary.json
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc     54202 Nov 29 01:34 log.47538113._001697.job.log.tgz.1
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc        95 Nov 29 01:37 pilot_heartbeat.json
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc      9885 Nov 29 01:37 heartbeat.json
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc      8192 Nov 29 01:38 boinc_mmap_file
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc        23 Nov 29 01:38 wrapper_checkpoint.txt
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc      4823 Nov 29 01:38 pilotlog.txt
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc    138094 Nov 29 01:38 log.47538113._001697.job.log.1
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc       186 Nov 29 01:38 output.list
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc       620 Nov 29 01:38 runtime_log
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc    215040 Nov 29 01:38 result.tar.gz
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc      8636 Nov 29 01:38 runtime_log.err
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc       646 Nov 29 01:38 nVLMDmHuAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmYOKDmOzZbEn.diag
[2025-11-29 01:38:14] -rw-r--r--. 1 boinc boinc     22717 Nov 29 01:38 stderr.txt
[2025-11-29 01:38:14] No HITS result produced
[2025-11-29 01:38:14]  *** Contents of shared directory: ***
[2025-11-29 01:38:14] total 371628
[2025-11-29 01:38:14] -rw-r--r--. 2 boinc boinc 379715323 Nov 29 01:25 ATLAS.root_0
[2025-11-29 01:38:14] -rw-r--r--. 2 boinc boinc     15847 Nov 29 01:25 start_atlas.sh
[2025-11-29 01:38:14] -rw-r--r--. 2 boinc boinc    590128 Nov 29 01:25 input.tar.gz
[2025-11-29 01:38:14] -rw-------. 1 boinc boinc    215040 Nov 29 01:38 result.tar.gz
01:38:15 (3999750): run_atlas exited; CPU time 79.870051
01:38:15 (3999750): called boinc_finish(0)

</stderr_txt>
]]>

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