Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:40:23 (728925): wrapper (7.7.26015): starting
05:40:23 (728925): wrapper: running run_atlas (--nthreads 9)
[2025-11-29 05:40:23] Arguments: --nthreads 9
[2025-11-29 05:40:23] Threads: 9
[2025-11-29 05:40:23] Checking for CVMFS
[2025-11-29 05:40:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 05:40:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 05:40:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 05:40:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 05:40:23] 2.13.2.0 5795 38058 188192 153439 2 325 32979652 39288833 6642 16776704 0 28788797 99.555 31277675 37107 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 05:40:23] CVMFS is ok
[2025-11-29 05:40:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 05:40:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 05:40:23] Further information can be found at the LHC@home message board.
[2025-11-29 05:40:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 05:40:23] Checking for apptainer binary...
[2025-11-29 05:40:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 05:40:23] Running /usr/bin/apptainer --version
[2025-11-29 05:40:23] apptainer version 1.4.4-1.el9
[2025-11-29 05:40:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 05:40:23] c-210-27.aglt2.org
[2025-11-29 05:40:23] apptainer works
[2025-11-29 05:40:23] Set ATHENA_PROC_NUMBER=9
[2025-11-29 05:40:23] Set ATHENA_CORE_NUMBER=9
[2025-11-29 05:40:23] Starting ATLAS job with PandaID=6897016277
[2025-11-29 05:40:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 01:13:56]  *** The last 200 lines of the pilot log: ***
[2025-11-30 01:13:56] 2025-11-30 06:13:18,459 | INFO     | mean x: 1764448006.965308
[2025-11-30 01:13:56] 2025-11-30 06:13:18,459 | INFO     | mean y: 3635797.362532524
[2025-11-30 01:13:56] 2025-11-30 06:13:18,459 | INFO     | intersect: -11286567111.924643
[2025-11-30 01:13:56] 2025-11-30 06:13:18,461 | INFO     | chi2: 8.506481908687787
[2025-11-30 01:13:56] 2025-11-30 06:13:18,463 | INFO     | sum of square deviations: 469264349056.8046
[2025-11-30 01:13:56] 2025-11-30 06:13:18,754 | INFO     | sum of deviations: 3574125072551.3447
[2025-11-30 01:13:56] 2025-11-30 06:13:18,754 | INFO     | mean x: 1764447854.4869337
[2025-11-30 01:13:56] 2025-11-30 06:13:18,755 | INFO     | mean y: 3648975.2229965157
[2025-11-30 01:13:56] 2025-11-30 06:13:18,755 | INFO     | intersect: -13435167181.611858
[2025-11-30 01:13:56] 2025-11-30 06:13:18,761 | INFO     | chi2: 4.803713972879691
[2025-11-30 01:13:56] 2025-11-30 06:13:18,761 | INFO     | current chi2=4.803713972879691 (change=43.52878164622214 %)
[2025-11-30 01:13:56] 2025-11-30 06:13:18,763 | INFO     | sum of square deviations: 463162855041.9143
[2025-11-30 01:13:56] 2025-11-30 06:13:18,953 | INFO     | monitor loop #4471: job 0:6897016277 is in state 'finished'
[2025-11-30 01:13:56] 2025-11-30 06:13:18,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 01:13:56] 2025-11-30 06:13:18,965 | INFO     | time since job start (70363s) is within the limit (172800.0s)
[2025-11-30 01:13:56] 2025-11-30 06:13:18,995 | INFO     | sum of deviations: 3941980943061.5723
[2025-11-30 01:13:56] 2025-11-30 06:13:18,995 | INFO     | mean x: 1764447702.008749
[2025-11-30 01:13:56] 2025-11-30 06:13:18,995 | INFO     | mean y: 3658158.842519685
[2025-11-30 01:13:56] 2025-11-30 06:13:18,995 | INFO     | intersect: -15013563409.406591
[2025-11-30 01:13:56] 2025-11-30 06:13:19,001 | INFO     | chi2: 2.6531490594672706
[2025-11-30 01:13:56] 2025-11-30 06:13:19,002 | INFO     | current chi2=2.6531490594672706 (change=44.76879609306167 %)
[2025-11-30 01:13:56] 2025-11-30 06:13:19,003 | INFO     | sum of square deviations: 457114455221.4842
[2025-11-30 01:13:56] 2025-11-30 06:13:19,077 | INFO     | sum of deviations: 3938841149891.988
[2025-11-30 01:13:56] 2025-11-30 06:13:19,077 | INFO     | mean x: 1764447549.529877
[2025-11-30 01:13:56] 2025-11-30 06:13:19,077 | INFO     | mean y: 3658077.029876977
[2025-11-30 01:13:56] 2025-11-30 06:13:19,078 | INFO     | intersect: -15200145993.324797
[2025-11-30 01:13:56] 2025-11-30 06:13:19,204 | INFO     | chi2: 2.589701655941508
[2025-11-30 01:13:56] 2025-11-30 06:13:19,204 | INFO     | current chi2=2.589701655941508 (change=2.3913998838234254 %)
[2025-11-30 01:13:56] 2025-11-30 06:13:19,204 | INFO     | right removable region: 1137
[2025-11-30 01:13:56] 2025-11-30 06:13:19,206 | INFO     | sum of square deviations: 469260856806.8045
[2025-11-30 01:13:56] 2025-11-30 06:13:19,279 | INFO     | sum of deviations: 2642796368990.9053
[2025-11-30 01:13:56] 2025-11-30 06:13:19,284 | INFO     | mean x: 1764448159.4869337
[2025-11-30 01:13:56] 2025-11-30 06:13:19,284 | INFO     | mean y: 3645675.6602787455
[2025-11-30 01:13:56] 2025-11-30 06:13:19,285 | INFO     | intersect: -9933422634.055038
[2025-11-30 01:13:56] 2025-11-30 06:13:19,286 | INFO     | chi2: 6.322159964941
[2025-11-30 01:13:56] 2025-11-30 06:13:19,286 | INFO     | current chi2=6.322159964941 (change=25.6783235089927 %)
[2025-11-30 01:13:56] 2025-11-30 06:13:19,292 | INFO     | sum of square deviations: 463156080286.9571
[2025-11-30 01:13:56] 2025-11-30 06:13:19,374 | INFO     | sum of deviations: 2551439752689.365
[2025-11-30 01:13:56] 2025-11-30 06:13:19,375 | INFO     | mean x: 1764448312.0061243
[2025-11-30 01:13:56] 2025-11-30 06:13:19,375 | INFO     | mean y: 3647957.6622922136
[2025-11-30 01:13:56] 2025-11-30 06:13:19,375 | INFO     | intersect: -9716365999.681952
[2025-11-30 01:13:56] 2025-11-30 06:13:19,381 | INFO     | chi2: 6.286541798135288
[2025-11-30 01:13:56] 2025-11-30 06:13:19,382 | INFO     | current chi2=6.286541798135288 (change=0.5633860421632694 %)
[2025-11-30 01:13:56] 2025-11-30 06:13:19,382 | INFO     | left removable region: 20
[2025-11-30 01:13:56] 2025-11-30 06:13:19,383 | INFO     | sum of square deviations: 432273077962.6845
[2025-11-30 01:13:56] 2025-11-30 06:13:19,425 | INFO     | sum of deviations: 3314643242959.2866
[2025-11-30 01:13:56] 2025-11-30 06:13:19,426 | INFO     | mean x: 1764448129.1208594
[2025-11-30 01:13:56] 2025-11-30 06:13:19,426 | INFO     | mean y: 3673716.197851388
[2025-11-30 01:13:56] 2025-11-30 06:13:19,426 | INFO     | intersect: -13526005477.118643
[2025-11-30 01:13:56] 2025-11-30 06:13:19,428 | INFO     | chi2: 0.33111306658066103
[2025-11-30 01:13:56] 2025-11-30 06:13:19,428 | INFO     | current memory leak: 7.67 B/s (using 1117 data points, chi2=0.33)
[2025-11-30 01:13:56] 2025-11-30 06:13:19,430 | INFO     | could have reported an average CPU frequency of 2599 MHz (42 samples)
[2025-11-30 01:13:56] 2025-11-30 06:13:19,431 | INFO     | ..............................
[2025-11-30 01:13:56] 2025-11-30 06:13:19,431 | INFO     | . Timing measurements:
[2025-11-30 01:13:56] 2025-11-30 06:13:19,431 | INFO     | . get job = 0 s
[2025-11-30 01:13:56] 2025-11-30 06:13:19,431 | INFO     | . initial setup = 2 s
[2025-11-30 01:13:56] 2025-11-30 06:13:19,431 | INFO     | . payload setup = 10 s
[2025-11-30 01:13:56] 2025-11-30 06:13:19,431 | INFO     | . stage-in = 0 s
[2025-11-30 01:13:56] 2025-11-30 06:13:19,432 | INFO     | . payload execution = 70300 s
[2025-11-30 01:13:56] 2025-11-30 06:13:19,432 | INFO     | . stage-out = 8 s
[2025-11-30 01:13:56] 2025-11-30 06:13:19,432 | INFO     | . log creation = 1 s
[2025-11-30 01:13:56] 2025-11-30 06:13:19,432 | INFO     | ..............................
[2025-11-30 01:13:56] 2025-11-30 06:13:20,375 | INFO     | 
[2025-11-30 01:13:56] 2025-11-30 06:13:20,376 | INFO     | job summary report
[2025-11-30 01:13:56] 2025-11-30 06:13:20,376 | INFO     | --------------------------------------------------
[2025-11-30 01:13:56] 2025-11-30 06:13:20,376 | INFO     | PanDA job id: 6897016277
[2025-11-30 01:13:56] 2025-11-30 06:13:20,376 | INFO     | task id: 47531058
[2025-11-30 01:13:56] 2025-11-30 06:13:20,376 | INFO     | errors: (none)
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | pilot state: finished 
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | transexitcode: 0
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | exeerrorcode: 0
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | exeerrordiag: 
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | exitcode: 0
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | exitmsg: OK
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | cpuconsumptiontime: 267992 s
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | nevents: 1000
[2025-11-30 01:13:56] 2025-11-30 06:13:20,377 | INFO     | neventsw: 0
[2025-11-30 01:13:56] 2025-11-30 06:13:20,378 | INFO     | pid: 741028
[2025-11-30 01:13:56] 2025-11-30 06:13:20,378 | INFO     | pgrp: 741028
[2025-11-30 01:13:56] 2025-11-30 06:13:20,378 | INFO     | corecount: 9
[2025-11-30 01:13:56] 2025-11-30 06:13:20,378 | INFO     | event service: False
[2025-11-30 01:13:56] 2025-11-30 06:13:20,378 | INFO     | sizes: {0: 2284278, 1: 2284477, 5: 2284739, 11: 2284795, 70317: 2360048, 70328: 2369042, 70330: 2369226, 70350: 2369472}
[2025-11-30 01:13:56] 2025-11-30 06:13:20,378 | INFO     | --------------------------------------------------
[2025-11-30 01:13:56] 2025-11-30 06:13:20,378 | INFO     | 
[2025-11-30 01:13:56] 2025-11-30 06:13:20,378 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-30 01:13:56] 2025-11-30 06:13:20,765 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,766 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,766 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,766 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,766 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,766 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,766 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,766 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,766 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,767 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 01:13:56] 2025-11-30 06:13:20,768 | INFO     | job 6897016277 has completed (purged errors)
[2025-11-30 01:13:56] 2025-11-30 06:13:20,780 | INFO     | overall cleanup function is called
[2025-11-30 01:13:56] 2025-11-30 06:13:21,812 | INFO     | --- collectZombieJob: --- 10, [741028]
[2025-11-30 01:13:56] 2025-11-30 06:13:21,812 | INFO     | zombie collector waiting for pid 741028
[2025-11-30 01:13:56] 2025-11-30 06:13:21,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 01:13:56] 2025-11-30 06:13:21,813 | INFO     | collected zombie processes
[2025-11-30 01:13:56] 2025-11-30 06:13:21,813 | INFO     | will attempt to kill all subprocesses of pid=741028
[2025-11-30 01:13:56] 2025-11-30 06:13:22,798 | INFO     | process IDs to be killed: [741028] (in reverse order)
[2025-11-30 01:13:56] 2025-11-30 06:13:23,061 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 01:13:56] 2025-11-30 06:13:23,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 01:13:56] 2025-11-30 06:13:23,078 | INFO     | did not find any defunct processes belonging to 741028
[2025-11-30 01:13:56] 2025-11-30 06:13:23,092 | INFO     | did not find any defunct processes belonging to 741028
[2025-11-30 01:13:56] 2025-11-30 06:13:23,102 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 01:13:56] 2025-11-30 06:13:23,102 | INFO     | ready for new job
[2025-11-30 01:13:56] 2025-11-30 06:13:23,102 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 01:13:56] 2025-11-30 06:13:23,142 | INFO     | ***************************************
[2025-11-30 01:13:56] 2025-11-30 06:13:23,142 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 01:13:56] 2025-11-30 06:13:23,142 | INFO     | ***************************************
[2025-11-30 01:13:56] 2025-11-30 06:13:23,142 | INFO     | 
[2025-11-30 01:13:56] 2025-11-30 06:13:23,188 | INFO     | architecture information:
[2025-11-30 01:13:56] 2025-11-30 06:13:23,279 | INFO     | executing command: cat /etc/os-release
[2025-11-30 01:13:56] 2025-11-30 06:13:23,395 | INFO     | cat /etc/os-release:
[2025-11-30 01:13:56] NAME="CentOS Linux"
[2025-11-30 01:13:56] VERSION="7 (Core)"
[2025-11-30 01:13:56] ID="centos"
[2025-11-30 01:13:56] ID_LIKE="rhel fedora"
[2025-11-30 01:13:56] VERSION_ID="7"
[2025-11-30 01:13:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 01:13:56] ANSI_COLOR="0;31"
[2025-11-30 01:13:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 01:13:56] HOME_URL="https://www.centos.org/"
[2025-11-30 01:13:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 01:13:56] 
[2025-11-30 01:13:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 01:13:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 01:13:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 01:13:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 01:13:56] 
[2025-11-30 01:13:56] 2025-11-30 06:13:23,395 | INFO     | ***************************************
[2025-11-30 01:13:56] 2025-11-30 06:13:23,899 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-30 01:13:56] 2025-11-30 06:13:23,975 | INFO     | sufficient remaining disk space (49823088640 B)
[2025-11-30 01:13:56] 2025-11-30 06:13:23,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 01:13:56] 2025-11-30 06:13:23,976 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 01:13:56] 2025-11-30 06:13:23,976 | INFO     | update_server=False
[2025-11-30 01:13:56] 2025-11-30 06:13:23,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 01:13:56] 2025-11-30 06:13:24,002 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 01:13:56] 2025-11-30 06:13:24,002 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 01:13:56] 2025-11-30 06:13:24,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 01:13:56] 2025-11-30 06:13:24,003 | INFO     | will abort loop
[2025-11-30 01:13:56] 2025-11-30 06:13:24,163 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 01:13:56] 2025-11-30 06:13:24,443 | INFO     | all payload control threads have been joined
[2025-11-30 01:13:56] 2025-11-30 06:13:24,870 | INFO     | all job control threads have been joined
[2025-11-30 01:13:56] 2025-11-30 06:13:24,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 01:13:56] 2025-11-30 06:13:24,982 | INFO     | [job] retrieve thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:25,009 | INFO     | [job] job monitor thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:25,066 | INFO     | all data control threads have been joined
[2025-11-30 01:13:56] 2025-11-30 06:13:25,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 01:13:56] 2025-11-30 06:13:25,449 | INFO     | [payload] control thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:25,472 | INFO     | [payload] failed_post thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:25,523 | INFO     | [data] copytool_in thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:25,657 | INFO     | [payload] validate_post thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:25,885 | INFO     | [job] control thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:26,028 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:26,029 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:26,076 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:26,076 | INFO     | [data] control thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:26,379 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:26,407 | INFO     | [job] queue monitor thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:26,409 | INFO     | [job] validate thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:26,979 | INFO     | [data] copytool_out thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:28,171 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 01:13:56] 2025-11-30 06:13:43,406 | INFO     | [monitor] cgroup control has ended
[2025-11-30 01:13:56] 2025-11-30 06:13:44,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247086503744)>', '<ExcThread(monitor, started 140246444402432)>']
[2025-11-30 01:13:56] 2025-11-30 06:13:49,429 | INFO     | all workflow threads have been joined
[2025-11-30 01:13:56] 2025-11-30 06:13:49,429 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 01:13:56] 2025-11-30 06:13:49,429 | INFO     | traces error code: 0
[2025-11-30 01:13:56] 2025-11-30 06:13:49,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 01:13:56] 2025-11-30 06:13:53,477 | INFO     | PID=732587 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-30 01:13:56] 2025-11-30 06:13:53,477 | INFO     | .. there are 8 such processes running
[2025-11-30 01:13:56] 2025-11-30 06:13:53,478 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 01:13:56] 2025-11-30 06:13:53,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 01:13:56] 2025-11-30 06:13:53,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 01:13:56] 2025-11-30 06:13:53,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 01:13:56] 2025-11-30 06:13:53,478 | INFO     | [monitor] control thread has ended
[2025-11-30 01:13:56] 2025-11-30 06:13:55,829 [wrapper] ==== pilot stdout END ====
[2025-11-30 01:13:56] 2025-11-30 06:13:55,845 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 01:13:56] 2025-11-30 06:13:55,876 [wrapper] pilotpid: 732587
[2025-11-30 01:13:56] 2025-11-30 06:13:55,891 [wrapper] Pilot exit status: 0
[2025-11-30 01:13:56] 2025-11-30 06:13:55,922 [wrapper] pandaids: 6897016277
[2025-11-30 01:13:56] 2025-11-30 06:13:55,979 [wrapper] cleanup supervisor_pilot 2406443 732588
[2025-11-30 01:13:56] 2025-11-30 06:13:55,983 [wrapper] Test setup, not cleaning
[2025-11-30 01:13:56] 2025-11-30 06:13:55,987 [wrapper] apfmon messages muted
[2025-11-30 01:13:56] 2025-11-30 06:13:55,990 [wrapper] ==== wrapper stdout END ====
[2025-11-30 01:13:56] 2025-11-30 06:13:55,994 [wrapper] ==== wrapper stderr END ====
[2025-11-30 01:13:56]  *** Error codes and diagnostics ***
[2025-11-30 01:13:56]     "exeErrorCode": 0,
[2025-11-30 01:13:56]     "exeErrorDiag": "",
[2025-11-30 01:13:56]     "pilotErrorCode": 0,
[2025-11-30 01:13:56]     "pilotErrorDiag": "",
[2025-11-30 01:13:56]  *** Listing of results directory ***
[2025-11-30 01:13:56] total 1090332
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 28 05:28 pilot3.tar.gz
[2025-11-30 01:13:56] -rwx------. 1 boincer umatlas     36292 Nov 28 05:29 runpilot2-wrapper.sh
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 28 05:32 queuedata.json
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas       100 Nov 29 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 01:13:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 29 05:40 run_atlas
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas       105 Nov 29 05:40 job.xml
[2025-11-30 01:13:56] -rw-r--r--. 2 boincer umatlas 377853297 Nov 29 05:40 EVNT.47531050._000439.pool.root.1
[2025-11-30 01:13:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 05:40 start_atlas.sh
[2025-11-30 01:13:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 29 05:40 shared
[2025-11-30 01:13:56] -rw-r--r--. 2 boincer umatlas    590125 Nov 29 05:40 input.tar.gz
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas         0 Nov 29 05:40 boinc_lockfile
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas      2878 Nov 29 05:40 pandaJob.out
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas        57 Nov 29 05:40 setup.sh.local
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas    991834 Nov 29 05:40 agis_schedconf.cvmfs.json
[2025-11-30 01:13:56] drwx------. 5 boincer umatlas      4096 Nov 29 05:40 pilot3
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas       533 Nov 30 01:01 boinc_task_state.xml
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas 711585987 Nov 30 01:10 HITS.47531058._000558.pool.root.1
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas      6663 Nov 30 01:12 init_data.xml
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas      1058 Nov 30 01:12 memory_monitor_summary.json
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas   1516240 Nov 30 01:12 agis_ddmendpoints.agis.ALL.json
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas   2460364 Nov 30 01:12 log.47531058._000558.job.log.tgz.1
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas        95 Nov 30 01:13 pilot_heartbeat.json
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas     27213 Nov 30 01:13 heartbeat.json
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas        29 Nov 30 01:13 wrapper_checkpoint.txt
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas       821 Nov 30 01:13 pilotlog.txt
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas   9089871 Nov 30 01:13 log.47531058._000558.job.log.1
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 30 01:13 boinc_mmap_file
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas       353 Nov 30 01:13 output.list
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas       620 Nov 30 01:13 runtime_log
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas  11591680 Nov 30 01:13 result.tar.gz
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas      9343 Nov 30 01:13 runtime_log.err
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas       660 Nov 30 01:13 itwNDm2tAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJJLKDmJNikCo.diag
[2025-11-30 01:13:56] -rw-r--r--. 1 boincer umatlas     21227 Nov 30 01:13 stderr.txt
[2025-11-30 01:13:56] HITS file was successfully produced:
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas 711585987 Nov 30 01:10 shared/HITS.pool.root.1
[2025-11-30 01:13:56]  *** Contents of shared directory: ***
[2025-11-30 01:13:56] total 1075836
[2025-11-30 01:13:56] -rw-r--r--. 2 boincer umatlas 377853297 Nov 29 05:40 ATLAS.root_0
[2025-11-30 01:13:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 05:40 start_atlas.sh
[2025-11-30 01:13:56] -rw-r--r--. 2 boincer umatlas    590125 Nov 29 05:40 input.tar.gz
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas 711585987 Nov 30 01:10 HITS.pool.root.1
[2025-11-30 01:13:56] -rw-------. 1 boincer umatlas  11591680 Nov 30 01:13 result.tar.gz
01:13:57 (728925): run_atlas exited; CPU time 268427.095720
01:13:57 (728925): called boinc_finish(0)

</stderr_txt>
]]>

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