Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:51:04 (3916849): wrapper (7.7.26015): starting
00:51:04 (3916849): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 00:51:04] Arguments: --nthreads 12
[2025-11-29 00:51:04] Threads: 12
[2025-11-29 00:51:04] Checking for CVMFS
[2025-11-29 00:51:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 00:51:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 00:51:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 00:51:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 00:51:05] 2.11.5.0 1503928 32201 219228 153436 2 327 42268147 45568001 15270 130560 0 313282713 99.788 205798892 27878 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-29 00:51:05] CVMFS is ok
[2025-11-29 00:51:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 00:51:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 00:51:05] Further information can be found at the LHC@home message board.
[2025-11-29 00:51:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 00:51:05] Checking for apptainer binary...
[2025-11-29 00:51:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 00:51:05] Running /usr/bin/apptainer --version
[2025-11-29 00:51:05] apptainer version 1.4.1-1.el9
[2025-11-29 00:51:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 00:51:06] wns0063.triumf.lcg
[2025-11-29 00:51:06] apptainer works
[2025-11-29 00:51:06] Set ATHENA_PROC_NUMBER=12
[2025-11-29 00:51:06] Set ATHENA_CORE_NUMBER=12
[2025-11-29 00:51:06] Starting ATLAS job with PandaID=6897834088
[2025-11-29 00:51:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 00:57:42]  *** The last 200 lines of the pilot log: ***
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | could have reported an average CPU frequency of 2705 MHz (4 samples)
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | ..............................
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | . Timing measurements:
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | . get job = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | . initial setup = 4 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . payload setup = 21 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . stage-in = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . payload execution = 110 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . stage-out = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . log creation = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | ..............................
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897834088/pilotlog.txt
[2025-11-29 00:57:42] 2025-11-29 08:56:35,912 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-29 00:57:42] - Log from pilotlog.txt -
[2025-11-29 00:57:42] 2025-11-29 08:56:35,783 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897834088/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | INFO     | extracted standard info from prmon json
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | WARNING  | wrong length of table data, x=[1764406370.0, 1764406431.0], y=[2316.0, 818404.0] (must be same and length>=4)
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | could have reported an average CPU frequency of 2705 MHz (4 samples)
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | ..............................
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | . Timing measurements:
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | . get job = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | . initial setup = 4 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . payload setup = 21 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . stage-in = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . payload execution = 110 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . stage-out = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . log creation = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | ..............................
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897834088/pilotlog.txt
[2025-11-29 00:57:42] 2025-11-29 08:56:35,912 | WARNING  | 
[2025-11-29 00:57:42] [begin log extracts]
[2025-11-29 00:57:42] - Log from pilotlog.txt -
[2025-11-29 00:57:42] 2025-11-29 08:56:35,783 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897834088/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | INFO     | extracted standard info from prmon json
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 00:57:42] 2025-11-29 08:56:35,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | WARNING  | wrong length of table data, x=[1764406370.0, 1764406431.0], y=[2316.0, 818404.0] (must be same and length>=4)
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | could have reported an average CPU frequency of 2705 MHz (4 samples)
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | ..............................
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | . Timing measurements:
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | . get job = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,818 | INFO     | . initial setup = 4 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . payload setup = 21 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . stage-in = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . payload execution = 110 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . stage-out = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | . log creation = 0 s
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | ..............................
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 00:57:42] 2025-11-29 08:56:35,819 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897834088/pilotlog.txt
[2025-11-29 00:57:42] [end log extracts]
[2025-11-29 00:57:42] 2025-11-29 08:56:35,912 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-29 00:57:42] 2025-11-29 08:56:35,913 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-29 00:57:42] 2025-11-29 08:56:36,310 | INFO     | time since job start (300s) is within the limit (172800.0s)
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | 
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | job summary report
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | --------------------------------------------------
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | PanDA job id: 6897834088
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | task id: 47530783
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-29 00:54:16,784 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | pilot state: failed 
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | transexitcode: 65
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | exeerrorcode: 65
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | exitcode: 65
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | cpuconsumptiontime: 59 s
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | nevents: 0
[2025-11-29 00:57:42] 2025-11-29 08:56:36,403 | INFO     | neventsw: 0
[2025-11-29 00:57:42] 2025-11-29 08:56:36,404 | INFO     | pid: 3928008
[2025-11-29 00:57:42] 2025-11-29 08:56:36,404 | INFO     | pgrp: 3928008
[2025-11-29 00:57:42] 2025-11-29 08:56:36,404 | INFO     | corecount: 12
[2025-11-29 00:57:42] 2025-11-29 08:56:36,404 | INFO     | event service: False
[2025-11-29 00:57:42] 2025-11-29 08:56:36,404 | INFO     | sizes: {0: 2284440, 11: 2284440, 15: 2284730, 22: 2284758, 135: 2308415, 136: 2312861, 266: 2312999}
[2025-11-29 00:57:42] 2025-11-29 08:56:36,404 | INFO     | --------------------------------------------------
[2025-11-29 00:57:42] 2025-11-29 08:56:36,404 | INFO     | 
[2025-11-29 00:57:42] 2025-11-29 08:56:36,404 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | job 6897834088 has completed (purged errors)
[2025-11-29 00:57:42] 2025-11-29 08:56:36,426 | INFO     | overall cleanup function is called
[2025-11-29 00:57:42] 2025-11-29 08:56:37,434 | INFO     | --- collectZombieJob: --- 10, [3928008]
[2025-11-29 00:57:42] 2025-11-29 08:56:37,434 | INFO     | zombie collector waiting for pid 3928008
[2025-11-29 00:57:42] 2025-11-29 08:56:37,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 00:57:42] 2025-11-29 08:56:37,434 | INFO     | collected zombie processes
[2025-11-29 00:57:42] 2025-11-29 08:56:37,434 | INFO     | will attempt to kill all subprocesses of pid=3928008
[2025-11-29 00:57:42] 2025-11-29 08:56:37,650 | INFO     | process IDs to be killed: [3928008] (in reverse order)
[2025-11-29 00:57:42] 2025-11-29 08:56:37,730 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 00:57:42] 2025-11-29 08:56:37,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 00:57:42] 2025-11-29 08:56:37,739 | INFO     | did not find any defunct processes belonging to 3928008
[2025-11-29 00:57:42] 2025-11-29 08:56:37,747 | INFO     | did not find any defunct processes belonging to 3928008
[2025-11-29 00:57:42] 2025-11-29 08:56:37,748 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 00:57:42] 2025-11-29 08:56:37,748 | INFO     | ready for new job
[2025-11-29 00:57:42] 2025-11-29 08:56:37,748 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 00:57:42] 2025-11-29 08:56:37,749 | INFO     | ***************************************
[2025-11-29 00:57:42] 2025-11-29 08:56:37,749 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 00:57:42] 2025-11-29 08:56:37,749 | INFO     | ***************************************
[2025-11-29 00:57:42] 2025-11-29 08:56:37,749 | INFO     | 
[2025-11-29 00:57:42] 2025-11-29 08:56:37,751 | INFO     | architecture information:
[2025-11-29 00:57:42] 2025-11-29 08:56:37,751 | INFO     | executing command: cat /etc/os-release
[2025-11-29 00:57:42] 2025-11-29 08:56:37,773 | INFO     | cat /etc/os-release:
[2025-11-29 00:57:42] NAME="CentOS Linux"
[2025-11-29 00:57:42] VERSION="7 (Core)"
[2025-11-29 00:57:42] ID="centos"
[2025-11-29 00:57:42] ID_LIKE="rhel fedora"
[2025-11-29 00:57:42] VERSION_ID="7"
[2025-11-29 00:57:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 00:57:42] ANSI_COLOR="0;31"
[2025-11-29 00:57:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 00:57:42] HOME_URL="https://www.centos.org/"
[2025-11-29 00:57:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 00:57:42] 
[2025-11-29 00:57:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 00:57:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 00:57:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 00:57:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 00:57:42] 
[2025-11-29 00:57:42] 2025-11-29 08:56:37,773 | INFO     | ***************************************
[2025-11-29 00:57:42] 2025-11-29 08:56:38,277 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-29 00:57:42] 2025-11-29 08:56:38,308 | INFO     | sufficient remaining disk space (2056219787264 B)
[2025-11-29 00:57:42] 2025-11-29 08:56:38,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 00:57:42] 2025-11-29 08:56:38,308 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 00:57:42] 2025-11-29 08:56:38,309 | INFO     | update_server=False
[2025-11-29 00:57:42] 2025-11-29 08:56:38,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 00:57:42] 2025-11-29 08:56:38,309 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-29 00:57:42] 2025-11-29 08:56:38,309 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 00:57:42] 2025-11-29 08:56:38,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 00:57:42] 2025-11-29 08:56:38,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 00:57:42] 2025-11-29 08:56:38,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 00:57:42] 2025-11-29 08:56:38,448 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 00:57:42] 2025-11-29 08:56:38,448 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 00:57:42] 2025-11-29 08:56:38,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 00:57:42] 2025-11-29 08:56:38,448 | INFO     | will abort loop
[2025-11-29 00:57:42] 2025-11-29 08:56:38,796 | INFO     | all data control threads have been joined
[2025-11-29 00:57:42] 2025-11-29 08:56:39,016 | INFO     | all job control threads have been joined
[2025-11-29 00:57:42] 2025-11-29 08:56:39,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 00:57:42] 2025-11-29 08:56:39,318 | INFO     | [job] retrieve thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:39,327 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:39,328 | INFO     | [payload] validate_post thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:39,454 | INFO     | [job] job monitor thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:39,456 | INFO     | [data] copytool_in thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:39,659 | INFO     | [payload] failed_post thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:39,730 | INFO     | all payload control threads have been joined
[2025-11-29 00:57:42] 2025-11-29 08:56:39,789 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:39,803 | INFO     | [data] control thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:39,877 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:40,022 | INFO     | [job] control thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:40,205 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:40,426 | INFO     | [job] validate thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:40,736 | INFO     | [payload] control thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:41,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 00:57:42] 2025-11-29 08:56:41,145 | INFO     | [data] copytool_out thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:42,041 | INFO     | [job] queue monitor thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:56:42,330 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 00:57:42] 2025-11-29 08:57:36,346 | INFO     | [monitor] cgroup control has ended
[2025-11-29 00:57:42] 2025-11-29 08:57:37,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354933516096)>', '<ExcThread(monitor, started 140354531604224)>']
[2025-11-29 00:57:42] 2025-11-29 08:57:37,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 00:57:42] 2025-11-29 08:57:37,668 | INFO     | [monitor] control thread has ended
[2025-11-29 00:57:42] 2025-11-29 08:57:42,511 | INFO     | all workflow threads have been joined
[2025-11-29 00:57:42] 2025-11-29 08:57:42,511 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 00:57:42] 2025-11-29 08:57:42,511 | INFO     | traces error code: 0
[2025-11-29 00:57:42] 2025-11-29 08:57:42,511 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 00:57:42] 2025-11-29 08:57:42,650 [wrapper] ==== pilot stdout END ====
[2025-11-29 00:57:42] 2025-11-29 08:57:42,655 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 00:57:42] 2025-11-29 08:57:42,657 [wrapper] pilotpid: 3920613
[2025-11-29 00:57:42] 2025-11-29 08:57:42,660 [wrapper] Pilot exit status: 0
[2025-11-29 00:57:42] 2025-11-29 08:57:42,674 [wrapper] pandaids: 6897834088
[2025-11-29 00:57:42] 2025-11-29 08:57:42,725 [wrapper] cleanup supervisor_pilot 3920619 3920614
[2025-11-29 00:57:42] 2025-11-29 08:57:42,726 [wrapper] Test setup, not cleaning
[2025-11-29 00:57:42] 2025-11-29 08:57:42,728 [wrapper] apfmon messages muted
[2025-11-29 00:57:42] 2025-11-29 08:57:42,730 [wrapper] ==== wrapper stdout END ====
[2025-11-29 00:57:42] 2025-11-29 08:57:42,731 [wrapper] ==== wrapper stderr END ====
[2025-11-29 00:57:42]  *** Error codes and diagnostics ***
[2025-11-29 00:57:42]     "exeErrorCode": 65,
[2025-11-29 00:57:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-29 00:57:42]     "pilotErrorCode": 1305,
[2025-11-29 00:57:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-29 00:57:42]  *** Listing of results directory ***
[2025-11-29 00:57:42] total 371908
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc    576529 Nov 28 02:28 pilot3.tar.gz
[2025-11-29 00:57:42] -rwx------. 1 boinc boinc     36292 Nov 28 02:29 runpilot2-wrapper.sh
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc      5112 Nov 28 02:32 queuedata.json
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc       100 Nov 29 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 00:57:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 00:51 run_atlas
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc       105 Nov 29 00:51 job.xml
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc      6596 Nov 29 00:51 init_data.xml
[2025-11-29 00:57:42] -rw-r--r--. 2 boinc boinc 376610328 Nov 29 00:51 EVNT.47530775._000033.pool.root.1
[2025-11-29 00:57:42] -rw-r--r--. 2 boinc boinc     15847 Nov 29 00:51 start_atlas.sh
[2025-11-29 00:57:42] drwxrwx--x. 2 boinc boinc      4096 Nov 29 00:51 shared
[2025-11-29 00:57:42] -rw-r--r--. 2 boinc boinc    590123 Nov 29 00:51 input.tar.gz
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc         0 Nov 29 00:51 boinc_lockfile
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc      2875 Nov 29 00:51 pandaJob.out
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc    991818 Nov 29 00:51 agis_schedconf.cvmfs.json
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc   1516240 Nov 29 00:51 agis_ddmendpoints.agis.ALL.json
[2025-11-29 00:57:42] drwx------. 5 boinc boinc      4096 Nov 29 00:51 pilot3
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc       524 Nov 29 00:53 boinc_task_state.xml
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc      1008 Nov 29 00:54 memory_monitor_summary.json
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc     50011 Nov 29 00:54 log.47530783._000321.job.log.tgz.1
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc      9881 Nov 29 00:56 heartbeat.json
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc        95 Nov 29 00:56 pilot_heartbeat.json
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc        23 Nov 29 00:57 wrapper_checkpoint.txt
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc      8192 Nov 29 00:57 boinc_mmap_file
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc      4737 Nov 29 00:57 pilotlog.txt
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc    105583 Nov 29 00:57 log.47530783._000321.job.log.1
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc       186 Nov 29 00:57 output.list
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc       620 Nov 29 00:57 runtime_log
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc    174080 Nov 29 00:57 result.tar.gz
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc       644 Nov 29 00:57 tGaKDm2tAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSILKDmedN9tm.diag
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc      8636 Nov 29 00:57 runtime_log.err
[2025-11-29 00:57:42] -rw-r--r--. 1 boinc boinc     22378 Nov 29 00:57 stderr.txt
[2025-11-29 00:57:42] No HITS result produced
[2025-11-29 00:57:42]  *** Contents of shared directory: ***
[2025-11-29 00:57:42] total 368556
[2025-11-29 00:57:42] -rw-r--r--. 2 boinc boinc 376610328 Nov 29 00:51 ATLAS.root_0
[2025-11-29 00:57:42] -rw-r--r--. 2 boinc boinc     15847 Nov 29 00:51 start_atlas.sh
[2025-11-29 00:57:42] -rw-r--r--. 2 boinc boinc    590123 Nov 29 00:51 input.tar.gz
[2025-11-29 00:57:42] -rw-------. 1 boinc boinc    174080 Nov 29 00:57 result.tar.gz
00:57:44 (3916849): run_atlas exited; CPU time 62.133193
00:57:44 (3916849): called boinc_finish(0)

</stderr_txt>
]]>

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