Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:05:58 (1166982): wrapper (7.7.26015): starting
01:05:58 (1166982): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 01:05:58] Arguments: --nthreads 12
[2025-11-29 01:05:58] Threads: 12
[2025-11-29 01:05:58] Checking for CVMFS
[2025-11-29 01:05:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 01:06:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 01:06:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 01:06:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 01:06:01] 2.11.5.0 2718463 32209 238960 153436 3 414 30133948 45568000 23520 130560 0 208965404 99.796 132549636 19868 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-29 01:06:01] CVMFS is ok
[2025-11-29 01:06:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 01:06:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 01:06:02] Further information can be found at the LHC@home message board.
[2025-11-29 01:06:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 01:06:02] Checking for apptainer binary...
[2025-11-29 01:06:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 01:06:02] Running /usr/bin/apptainer --version
[2025-11-29 01:06:02] apptainer version 1.4.1-1.el9
[2025-11-29 01:06:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 01:06:03] wns0043.triumf.lcg
[2025-11-29 01:06:03] apptainer works
[2025-11-29 01:06:03] Set ATHENA_PROC_NUMBER=12
[2025-11-29 01:06:03] Set ATHENA_CORE_NUMBER=12
[2025-11-29 01:06:03] Starting ATLAS job with PandaID=6896598019
[2025-11-29 01:06:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 01:16:29]  *** The last 200 lines of the pilot log: ***
[2025-11-29 01:16:29] 2025-11-29 09:15:52,812 | WARNING  | wrong length of table data, x=[1764407396.0, 1764407457.0, 1764407518.0, 1764407579.0], y=[3318.0, 246985.0, 820237.0, 224508.0] (must be same and length>=4)
[2025-11-29 01:16:29] 2025-11-29 09:15:52,812 | INFO     | could have reported an average CPU frequency of 1521 MHz (4 samples)
[2025-11-29 01:16:29] 2025-11-29 09:15:52,813 | INFO     | ..............................
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . Timing measurements:
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . get job = 0 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . initial setup = 4 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . payload setup = 63 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . stage-in = 0 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . payload execution = 228 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . stage-out = 2 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | . log creation = 0 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | ..............................
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896598019/pilotlog.txt
[2025-11-29 01:16:29] 2025-11-29 09:15:52,955 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-29 01:16:29] - Log from pilotlog.txt -
[2025-11-29 01:16:29] 2025-11-29 09:15:52,810 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896598019/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 01:16:29] 2025-11-29 09:15:52,810 | INFO     | extracted standard info from prmon json
[2025-11-29 01:16:29] 2025-11-29 09:15:52,811 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 01:16:29] 2025-11-29 09:15:52,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 01:16:29] 2025-11-29 09:15:52,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 01:16:29] 2025-11-29 09:15:52,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 01:16:29] 2025-11-29 09:15:52,812 | WARNING  | wrong length of table data, x=[1764407396.0, 1764407457.0, 1764407518.0, 1764407579.0], y=[3318.0, 246985.0, 820237.0, 224508.0] (must be same and length>=4)
[2025-11-29 01:16:29] 2025-11-29 09:15:52,812 | INFO     | could have reported an average CPU frequency of 1521 MHz (4 samples)
[2025-11-29 01:16:29] 2025-11-29 09:15:52,813 | INFO     | ..............................
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . Timing measurements:
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . get job = 0 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . initial setup = 4 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . payload setup = 63 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . stage-in = 0 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . payload execution = 228 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . stage-out = 2 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | . log creation = 0 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | ..............................
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896598019/pilotlog.txt
[2025-11-29 01:16:29] 2025-11-29 09:15:52,956 | WARNING  | 
[2025-11-29 01:16:29] [begin log extracts]
[2025-11-29 01:16:29] - Log from pilotlog.txt -
[2025-11-29 01:16:29] 2025-11-29 09:15:52,810 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6896598019/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 01:16:29] 2025-11-29 09:15:52,810 | INFO     | extracted standard info from prmon json
[2025-11-29 01:16:29] 2025-11-29 09:15:52,811 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 01:16:29] 2025-11-29 09:15:52,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 01:16:29] 2025-11-29 09:15:52,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 01:16:29] 2025-11-29 09:15:52,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 01:16:29] 2025-11-29 09:15:52,812 | WARNING  | wrong length of table data, x=[1764407396.0, 1764407457.0, 1764407518.0, 1764407579.0], y=[3318.0, 246985.0, 820237.0, 224508.0] (must be same and length>=4)
[2025-11-29 01:16:29] 2025-11-29 09:15:52,812 | INFO     | could have reported an average CPU frequency of 1521 MHz (4 samples)
[2025-11-29 01:16:29] 2025-11-29 09:15:52,813 | INFO     | ..............................
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . Timing measurements:
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . get job = 0 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . initial setup = 4 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . payload setup = 63 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . stage-in = 0 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . payload execution = 228 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,854 | INFO     | . stage-out = 2 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | . log creation = 0 s
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | ..............................
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 01:16:29] 2025-11-29 09:15:52,855 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896598019/pilotlog.txt
[2025-11-29 01:16:29] [end log extracts]
[2025-11-29 01:16:29] 2025-11-29 09:15:52,956 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-29 01:16:29] 2025-11-29 09:15:52,957 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-29 01:16:29] 2025-11-29 09:15:53,290 | INFO     | time since job start (527s) is within the limit (172800.0s)
[2025-11-29 01:16:29] 2025-11-29 09:15:53,513 | INFO     | 
[2025-11-29 01:16:29] 2025-11-29 09:15:53,513 | INFO     | job summary report
[2025-11-29 01:16:29] 2025-11-29 09:15:53,513 | INFO     | --------------------------------------------------
[2025-11-29 01:16:29] 2025-11-29 09:15:53,513 | INFO     | PanDA job id: 6896598019
[2025-11-29 01:16:29] 2025-11-29 09:15:53,513 | INFO     | task id: 47538121
[2025-11-29 01:16:29] 2025-11-29 09:15:53,513 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-29 01:13:00,134 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | pilot state: failed 
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | transexitcode: 65
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | exeerrorcode: 65
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | exitcode: 65
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | cpuconsumptiontime: 102 s
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | nevents: 0
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | neventsw: 0
[2025-11-29 01:16:29] 2025-11-29 09:15:53,514 | INFO     | pid: 1178982
[2025-11-29 01:16:29] 2025-11-29 09:15:53,515 | INFO     | pgrp: 1178982
[2025-11-29 01:16:29] 2025-11-29 09:15:53,515 | INFO     | corecount: 12
[2025-11-29 01:16:29] 2025-11-29 09:15:53,515 | INFO     | event service: False
[2025-11-29 01:16:29] 2025-11-29 09:15:53,515 | INFO     | sizes: {0: 2283619, 1: 2284217, 2: 2284329, 3: 2284500, 4: 2284528, 15: 2284556, 26: 2284712, 32: 2285002, 37: 2285030, 298: 2308604, 299: 2308608, 302: 2313234, 3
[2025-11-29 01:16:29] 2025-11-29 09:15:53,515 | INFO     | --------------------------------------------------
[2025-11-29 01:16:29] 2025-11-29 09:15:53,515 | INFO     | 
[2025-11-29 01:16:29] 2025-11-29 09:15:53,515 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-29 01:16:29] 2025-11-29 09:15:53,649 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 01:16:29] 2025-11-29 09:15:53,651 | INFO     | job 6896598019 has completed (purged errors)
[2025-11-29 01:16:29] 2025-11-29 09:15:53,652 | INFO     | overall cleanup function is called
[2025-11-29 01:16:29] 2025-11-29 09:15:54,667 | INFO     | --- collectZombieJob: --- 10, [1178982]
[2025-11-29 01:16:29] 2025-11-29 09:15:54,667 | INFO     | zombie collector waiting for pid 1178982
[2025-11-29 01:16:29] 2025-11-29 09:15:54,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 01:16:29] 2025-11-29 09:15:54,667 | INFO     | collected zombie processes
[2025-11-29 01:16:29] 2025-11-29 09:15:54,667 | INFO     | will attempt to kill all subprocesses of pid=1178982
[2025-11-29 01:16:29] 2025-11-29 09:15:55,612 | INFO     | process IDs to be killed: [1178982] (in reverse order)
[2025-11-29 01:16:29] 2025-11-29 09:15:55,779 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 01:16:29] 2025-11-29 09:15:55,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 01:16:29] 2025-11-29 09:15:55,847 | INFO     | did not find any defunct processes belonging to 1178982
[2025-11-29 01:16:29] 2025-11-29 09:15:55,909 | INFO     | did not find any defunct processes belonging to 1178982
[2025-11-29 01:16:29] 2025-11-29 09:15:55,910 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 01:16:29] 2025-11-29 09:15:55,910 | INFO     | ready for new job
[2025-11-29 01:16:29] 2025-11-29 09:15:55,910 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 01:16:29] 2025-11-29 09:15:55,912 | INFO     | ***************************************
[2025-11-29 01:16:29] 2025-11-29 09:15:55,924 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 01:16:29] 2025-11-29 09:15:55,924 | INFO     | ***************************************
[2025-11-29 01:16:29] 2025-11-29 09:15:55,924 | INFO     | 
[2025-11-29 01:16:29] 2025-11-29 09:15:55,927 | INFO     | architecture information:
[2025-11-29 01:16:29] 2025-11-29 09:15:55,938 | INFO     | executing command: cat /etc/os-release
[2025-11-29 01:16:29] 2025-11-29 09:15:56,063 | INFO     | cat /etc/os-release:
[2025-11-29 01:16:29] NAME="CentOS Linux"
[2025-11-29 01:16:29] VERSION="7 (Core)"
[2025-11-29 01:16:29] ID="centos"
[2025-11-29 01:16:29] ID_LIKE="rhel fedora"
[2025-11-29 01:16:29] VERSION_ID="7"
[2025-11-29 01:16:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 01:16:29] ANSI_COLOR="0;31"
[2025-11-29 01:16:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 01:16:29] HOME_URL="https://www.centos.org/"
[2025-11-29 01:16:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 01:16:29] 
[2025-11-29 01:16:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 01:16:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 01:16:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 01:16:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 01:16:29] 
[2025-11-29 01:16:29] 2025-11-29 09:15:56,064 | INFO     | ***************************************
[2025-11-29 01:16:29] 2025-11-29 09:15:56,567 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-29 01:16:29] 2025-11-29 09:15:56,715 | INFO     | sufficient remaining disk space (2014868144128 B)
[2025-11-29 01:16:29] 2025-11-29 09:15:56,716 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 01:16:29] 2025-11-29 09:15:56,716 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 01:16:29] 2025-11-29 09:15:56,716 | INFO     | update_server=False
[2025-11-29 01:16:29] 2025-11-29 09:15:56,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 01:16:29] 2025-11-29 09:15:56,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 01:16:29] 2025-11-29 09:15:56,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 01:16:29] 2025-11-29 09:15:56,719 | INFO     | aborting loop
[2025-11-29 01:16:29] 2025-11-29 09:15:56,826 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 01:16:29] 2025-11-29 09:15:57,485 | INFO     | all payload control threads have been joined
[2025-11-29 01:16:29] 2025-11-29 09:15:57,604 | INFO     | all data control threads have been joined
[2025-11-29 01:16:29] 2025-11-29 09:15:57,722 | INFO     | [job] retrieve thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:57,732 | INFO     | [job] job monitor thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,053 | INFO     | [data] copytool_in thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,060 | INFO     | [job] validate thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,258 | INFO     | all job control threads have been joined
[2025-11-29 01:16:29] 2025-11-29 09:15:58,334 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 01:16:29] 2025-11-29 09:15:58,398 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,491 | INFO     | [payload] control thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,616 | INFO     | [data] control thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,619 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,837 | INFO     | [data] copytool_out thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,843 | INFO     | [payload] validate_post thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:58,843 | INFO     | [payload] failed_post thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:59,264 | INFO     | [job] control thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:15:59,385 | INFO     | [job] queue monitor thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:16:00,730 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 01:16:29] 2025-11-29 09:16:05,910 | INFO     | [monitor] cgroup control has ended
[2025-11-29 01:16:29] 2025-11-29 09:16:06,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104792909632)>', '<ExcThread(monitor, started 140104473483008)>']
[2025-11-29 01:16:29] 2025-11-29 09:16:11,514 | INFO     | all workflow threads have been joined
[2025-11-29 01:16:29] 2025-11-29 09:16:11,514 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 01:16:29] 2025-11-29 09:16:11,514 | INFO     | traces error code: 0
[2025-11-29 01:16:29] 2025-11-29 09:16:11,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 01:16:29] 2025-11-29 09:16:28,377 | INFO     | PID=1170988 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 01:16:29] 2025-11-29 09:16:28,378 | INFO     | .. there are 49 such processes running
[2025-11-29 01:16:29] 2025-11-29 09:16:28,380 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 01:16:29] 2025-11-29 09:16:28,380 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 01:16:29] 2025-11-29 09:16:28,380 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 01:16:29] 2025-11-29 09:16:28,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 01:16:29] 2025-11-29 09:16:28,380 | INFO     | [monitor] control thread has ended
[2025-11-29 01:16:29] 2025-11-29 09:16:29,011 [wrapper] ==== pilot stdout END ====
[2025-11-29 01:16:29] 2025-11-29 09:16:29,033 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 01:16:29] 2025-11-29 09:16:29,047 [wrapper] pilotpid: 1170988
[2025-11-29 01:16:29] 2025-11-29 09:16:29,059 [wrapper] Pilot exit status: 0
[2025-11-29 01:16:29] 2025-11-29 09:16:29,075 [wrapper] pandaids: 6896598019
[2025-11-29 01:16:29] 2025-11-29 09:16:29,170 [wrapper] cleanup supervisor_pilot 1170994 1170989
[2025-11-29 01:16:29] 2025-11-29 09:16:29,174 [wrapper] Test setup, not cleaning
[2025-11-29 01:16:29] 2025-11-29 09:16:29,177 [wrapper] apfmon messages muted
[2025-11-29 01:16:29] 2025-11-29 09:16:29,180 [wrapper] ==== wrapper stdout END ====
[2025-11-29 01:16:29] 2025-11-29 09:16:29,183 [wrapper] ==== wrapper stderr END ====
[2025-11-29 01:16:29]  *** Error codes and diagnostics ***
[2025-11-29 01:16:29]     "exeErrorCode": 65,
[2025-11-29 01:16:29]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-29 01:16:29]     "pilotErrorCode": 1305,
[2025-11-29 01:16:29]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-29 01:16:29]  *** Listing of results directory ***
[2025-11-29 01:16:29] total 370560
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc    576529 Nov 28 02:28 pilot3.tar.gz
[2025-11-29 01:16:29] -rwx------. 1 boinc boinc     36292 Nov 28 02:28 runpilot2-wrapper.sh
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc      5112 Nov 28 02:32 queuedata.json
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc       100 Nov 29 01:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 01:16:29] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 01:05 run_atlas
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc       105 Nov 29 01:05 job.xml
[2025-11-29 01:16:29] -rw-r--r--. 2 boinc boinc 375191483 Nov 29 01:05 EVNT.47528880._000004.pool.root.1
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc      6596 Nov 29 01:05 init_data.xml
[2025-11-29 01:16:29] -rw-r--r--. 2 boinc boinc     15847 Nov 29 01:05 start_atlas.sh
[2025-11-29 01:16:29] drwxrwx--x. 2 boinc boinc      4096 Nov 29 01:05 shared
[2025-11-29 01:16:29] -rw-r--r--. 2 boinc boinc    590123 Nov 29 01:05 input.tar.gz
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc         0 Nov 29 01:05 boinc_lockfile
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc      2878 Nov 29 01:06 pandaJob.out
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc    991818 Nov 29 01:07 agis_schedconf.cvmfs.json
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc   1516240 Nov 29 01:07 agis_ddmendpoints.agis.ALL.json
[2025-11-29 01:16:29] drwx------. 5 boinc boinc      4096 Nov 29 01:07 pilot3
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc       525 Nov 29 01:12 boinc_task_state.xml
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc       999 Nov 29 01:13 memory_monitor_summary.json
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc     51551 Nov 29 01:13 log.47538121._000037.job.log.tgz.1
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc      9895 Nov 29 01:15 heartbeat.json
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc        23 Nov 29 01:16 wrapper_checkpoint.txt
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc      8192 Nov 29 01:16 boinc_mmap_file
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc        95 Nov 29 01:16 pilot_heartbeat.json
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc       823 Nov 29 01:16 pilotlog.txt
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc    124697 Nov 29 01:16 log.47538121._000037.job.log.1
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc       186 Nov 29 01:16 output.list
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc       620 Nov 29 01:16 runtime_log
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc    194560 Nov 29 01:16 result.tar.gz
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc      8636 Nov 29 01:16 runtime_log.err
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc       645 Nov 29 01:16 eYvKDmrtAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6GLKDmFxTAan.diag
[2025-11-29 01:16:29] -rw-r--r--. 1 boinc boinc     22701 Nov 29 01:16 stderr.txt
[2025-11-29 01:16:29] No HITS result produced
[2025-11-29 01:16:29]  *** Contents of shared directory: ***
[2025-11-29 01:16:29] total 367192
[2025-11-29 01:16:29] -rw-r--r--. 2 boinc boinc 375191483 Nov 29 01:05 ATLAS.root_0
[2025-11-29 01:16:29] -rw-r--r--. 2 boinc boinc     15847 Nov 29 01:05 start_atlas.sh
[2025-11-29 01:16:29] -rw-r--r--. 2 boinc boinc    590123 Nov 29 01:05 input.tar.gz
[2025-11-29 01:16:29] -rw-------. 1 boinc boinc    194560 Nov 29 01:16 result.tar.gz
01:16:30 (1166982): run_atlas exited; CPU time 114.050896
01:16:30 (1166982): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN