Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:21:40 (19916): wrapper (7.7.26015): starting
03:21:40 (19916): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 03:21:40] Arguments: --nthreads 12
[2025-11-29 03:21:40] Threads: 12
[2025-11-29 03:21:40] Checking for CVMFS
[2025-11-29 03:21:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 03:21:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 03:21:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 03:21:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 03:21:40] 2.11.2.0 10903 10220 83692 153436 3 1 13859841 20275201 1 130560 0 4446345 99.867 824833 42957 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 03:21:40] CVMFS is ok
[2025-11-29 03:21:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 03:21:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 03:21:40] Further information can be found at the LHC@home message board.
[2025-11-29 03:21:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 03:21:40] Checking for apptainer binary...
[2025-11-29 03:21:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 03:21:40] Running /usr/bin/apptainer --version
[2025-11-29 03:21:40] apptainer version 1.3.2-1.el7
[2025-11-29 03:21:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 03:21:42] c-205-22.aglt2.org
[2025-11-29 03:21:42] apptainer works
[2025-11-29 03:21:42] Set ATHENA_PROC_NUMBER=12
[2025-11-29 03:21:42] Set ATHENA_CORE_NUMBER=12
[2025-11-29 03:21:42] Starting ATLAS job with PandaID=6897017160
[2025-11-29 03:21:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 09:34:39]  *** The last 200 lines of the pilot log: ***
[2025-11-29 09:34:39] 2025-11-29 14:33:53,736 | INFO     | monitor loop #1676: job 0:6897017160 is in state 'finished'
[2025-11-29 09:34:39] 2025-11-29 14:33:53,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 09:34:39] 2025-11-29 14:33:53,755 | INFO     | time since job start (22316s) is within the limit (172800.0s)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,620 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-29 09:34:39] 2025-11-29 14:33:54,625 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-11-29 09:34:39] 2025-11-29 14:33:54,627 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897017160/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,628 | INFO     | extracted standard info from prmon json
[2025-11-29 09:34:39] 2025-11-29 14:33:54,628 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 09:34:39] 2025-11-29 14:33:54,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 09:34:39] 2025-11-29 14:33:54,634 | INFO     | fitting pss+swap vs Time
[2025-11-29 09:34:39] 2025-11-29 14:33:54,635 | INFO     | sum of square deviations: 15202764621.573769
[2025-11-29 09:34:39] 2025-11-29 14:33:54,638 | INFO     | sum of deviations: 257627487835.65527
[2025-11-29 09:34:39] 2025-11-29 14:33:54,638 | INFO     | mean x: 1764415686.7213116
[2025-11-29 09:34:39] 2025-11-29 14:33:54,638 | INFO     | mean y: 4010156.9672131147
[2025-11-29 09:34:39] 2025-11-29 14:33:54,638 | INFO     | intersect: -29895945027.68251
[2025-11-29 09:34:39] 2025-11-29 14:33:54,639 | INFO     | chi2: 6.387214771013661
[2025-11-29 09:34:39] 2025-11-29 14:33:54,639 | INFO     | sum of square deviations: 14588201058.825354
[2025-11-29 09:34:39] 2025-11-29 14:33:54,642 | INFO     | sum of deviations: 438155313483.5873
[2025-11-29 09:34:39] 2025-11-29 14:33:54,642 | INFO     | mean x: 1764415534.2243767
[2025-11-29 09:34:39] 2025-11-29 14:33:54,642 | INFO     | mean y: 4054900.387811634
[2025-11-29 09:34:39] 2025-11-29 14:33:54,642 | INFO     | intersect: -52990007794.251396
[2025-11-29 09:34:39] 2025-11-29 14:33:54,643 | INFO     | chi2: 2.78936477408367
[2025-11-29 09:34:39] 2025-11-29 14:33:54,643 | INFO     | current chi2=2.78936477408367 (change=56.328934064620576 %)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,643 | INFO     | sum of square deviations: 13990406609.022497
[2025-11-29 09:34:39] 2025-11-29 14:33:54,646 | INFO     | sum of deviations: 451981153907.88715
[2025-11-29 09:34:39] 2025-11-29 14:33:54,646 | INFO     | mean x: 1764415381.724719
[2025-11-29 09:34:39] 2025-11-29 14:33:54,646 | INFO     | mean y: 4058378.3764044945
[2025-11-29 09:34:39] 2025-11-29 14:33:54,647 | INFO     | intersect: -56998037592.90598
[2025-11-29 09:34:39] 2025-11-29 14:33:54,647 | INFO     | chi2: 2.658413077424098
[2025-11-29 09:34:39] 2025-11-29 14:33:54,647 | INFO     | current chi2=2.658413077424098 (change=4.694678081413378 %)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,647 | INFO     | right removable region: 355
[2025-11-29 09:34:39] 2025-11-29 14:33:54,648 | INFO     | sum of square deviations: 14588151648.825354
[2025-11-29 09:34:39] 2025-11-29 14:33:54,651 | INFO     | sum of deviations: 108400486951.66768
[2025-11-29 09:34:39] 2025-11-29 14:33:54,651 | INFO     | mean x: 1764415839.2243767
[2025-11-29 09:34:39] 2025-11-29 14:33:54,651 | INFO     | mean y: 4047073.8559556785
[2025-11-29 09:34:39] 2025-11-29 14:33:54,651 | INFO     | intersect: -13106835014.661303
[2025-11-29 09:34:39] 2025-11-29 14:33:54,651 | INFO     | chi2: 3.8881166366421946
[2025-11-29 09:34:39] 2025-11-29 14:33:54,651 | INFO     | current chi2=3.8881166366421946 (change=39.126571188944936 %)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,652 | INFO     | sum of square deviations: 13990351587.022497
[2025-11-29 09:34:39] 2025-11-29 14:33:54,655 | INFO     | sum of deviations: 77366759815.30916
[2025-11-29 09:34:39] 2025-11-29 14:33:54,655 | INFO     | mean x: 1764415991.724719
[2025-11-29 09:34:39] 2025-11-29 14:33:54,655 | INFO     | mean y: 4054979.3398876404
[2025-11-29 09:34:39] 2025-11-29 14:33:54,655 | INFO     | intersect: -9753180026.296526
[2025-11-29 09:34:39] 2025-11-29 14:33:54,655 | INFO     | chi2: 3.830960430318403
[2025-11-29 09:34:39] 2025-11-29 14:33:54,656 | INFO     | current chi2=3.830960430318403 (change=1.4700229356584407 %)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,656 | INFO     | left removable region: 20
[2025-11-29 09:34:39] 2025-11-29 14:33:54,656 | INFO     | sum of square deviations: 11657760200.758154
[2025-11-29 09:34:39] 2025-11-29 14:33:54,659 | INFO     | sum of deviations: 236727591532.77902
[2025-11-29 09:34:39] 2025-11-29 14:33:54,659 | INFO     | mean x: 1764415961.2268658
[2025-11-29 09:34:39] 2025-11-29 14:33:54,659 | INFO     | mean y: 4114649.713432836
[2025-11-29 09:34:39] 2025-11-29 14:33:54,659 | INFO     | intersect: -35824889701.91711
[2025-11-29 09:34:39] 2025-11-29 14:33:54,659 | INFO     | chi2: 0.01861727326872309
[2025-11-29 09:34:39] 2025-11-29 14:33:54,660 | INFO     | current memory leak: 20.31 B/s (using 335 data points, chi2=0.02)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,660 | INFO     | could have reported an average CPU frequency of 2377 MHz (16 samples)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,660 | INFO     | ..............................
[2025-11-29 09:34:39] 2025-11-29 14:33:54,660 | INFO     | . Timing measurements:
[2025-11-29 09:34:39] 2025-11-29 14:33:54,660 | INFO     | . get job = 0 s
[2025-11-29 09:34:39] 2025-11-29 14:33:54,660 | INFO     | . initial setup = 2 s
[2025-11-29 09:34:39] 2025-11-29 14:33:54,661 | INFO     | . payload setup = 14 s
[2025-11-29 09:34:39] 2025-11-29 14:33:54,661 | INFO     | . stage-in = 0 s
[2025-11-29 09:34:39] 2025-11-29 14:33:54,661 | INFO     | . payload execution = 22273 s
[2025-11-29 09:34:39] 2025-11-29 14:33:54,661 | INFO     | . stage-out = 3 s
[2025-11-29 09:34:39] 2025-11-29 14:33:54,661 | INFO     | . log creation = 0 s
[2025-11-29 09:34:39] 2025-11-29 14:33:54,661 | INFO     | ..............................
[2025-11-29 09:34:39] 2025-11-29 14:33:54,749 | INFO     | 
[2025-11-29 09:34:39] 2025-11-29 14:33:54,749 | INFO     | job summary report
[2025-11-29 09:34:39] 2025-11-29 14:33:54,749 | INFO     | --------------------------------------------------
[2025-11-29 09:34:39] 2025-11-29 14:33:54,750 | INFO     | PanDA job id: 6897017160
[2025-11-29 09:34:39] 2025-11-29 14:33:54,750 | INFO     | task id: 47531058
[2025-11-29 09:34:39] 2025-11-29 14:33:54,750 | INFO     | errors: (none)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,750 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 09:34:39] 2025-11-29 14:33:54,750 | INFO     | pilot state: finished 
[2025-11-29 09:34:39] 2025-11-29 14:33:54,750 | INFO     | transexitcode: 0
[2025-11-29 09:34:39] 2025-11-29 14:33:54,751 | INFO     | exeerrorcode: 0
[2025-11-29 09:34:39] 2025-11-29 14:33:54,751 | INFO     | exeerrordiag: 
[2025-11-29 09:34:39] 2025-11-29 14:33:54,751 | INFO     | exitcode: 0
[2025-11-29 09:34:39] 2025-11-29 14:33:54,751 | INFO     | exitmsg: OK
[2025-11-29 09:34:39] 2025-11-29 14:33:54,751 | INFO     | cpuconsumptiontime: 254365 s
[2025-11-29 09:34:39] 2025-11-29 14:33:54,751 | INFO     | nevents: 1000
[2025-11-29 09:34:39] 2025-11-29 14:33:54,752 | INFO     | neventsw: 0
[2025-11-29 09:34:39] 2025-11-29 14:33:54,752 | INFO     | pid: 30703
[2025-11-29 09:34:39] 2025-11-29 14:33:54,752 | INFO     | pgrp: 30703
[2025-11-29 09:34:39] 2025-11-29 14:33:54,752 | INFO     | corecount: 12
[2025-11-29 09:34:39] 2025-11-29 14:33:54,752 | INFO     | event service: False
[2025-11-29 09:34:39] 2025-11-29 14:33:54,752 | INFO     | sizes: {0: 2284449, 5: 2284711, 11: 2284767, 22288: 2339325, 22289: 2339324, 22292: 2348374, 22294: 2348558, 22301: 2348804}
[2025-11-29 09:34:39] 2025-11-29 14:33:54,753 | INFO     | --------------------------------------------------
[2025-11-29 09:34:39] 2025-11-29 14:33:54,753 | INFO     | 
[2025-11-29 09:34:39] 2025-11-29 14:33:54,753 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-29 09:34:39] 2025-11-29 14:33:54,779 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,779 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,780 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,780 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,780 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,780 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,780 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,781 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,781 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,782 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,783 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 09:34:39] 2025-11-29 14:33:54,783 | INFO     | job 6897017160 has completed (purged errors)
[2025-11-29 09:34:39] 2025-11-29 14:33:54,783 | INFO     | overall cleanup function is called
[2025-11-29 09:34:39] 2025-11-29 14:33:55,800 | INFO     | --- collectZombieJob: --- 10, [30703]
[2025-11-29 09:34:39] 2025-11-29 14:33:55,800 | INFO     | zombie collector waiting for pid 30703
[2025-11-29 09:34:39] 2025-11-29 14:33:55,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 09:34:39] 2025-11-29 14:33:55,800 | INFO     | collected zombie processes
[2025-11-29 09:34:39] 2025-11-29 14:33:55,800 | INFO     | will attempt to kill all subprocesses of pid=30703
[2025-11-29 09:34:39] 2025-11-29 14:33:55,891 | INFO     | process IDs to be killed: [30703] (in reverse order)
[2025-11-29 09:34:39] 2025-11-29 14:33:55,942 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 09:34:39] 2025-11-29 14:33:55,942 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 09:34:39] 2025-11-29 14:33:55,946 | INFO     | did not find any defunct processes belonging to 30703
[2025-11-29 09:34:39] 2025-11-29 14:33:55,948 | INFO     | did not find any defunct processes belonging to 30703
[2025-11-29 09:34:39] 2025-11-29 14:33:55,950 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 09:34:39] 2025-11-29 14:33:55,951 | INFO     | ready for new job
[2025-11-29 09:34:39] 2025-11-29 14:33:55,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 09:34:39] 2025-11-29 14:33:55,953 | INFO     | ***************************************
[2025-11-29 09:34:39] 2025-11-29 14:33:55,953 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 09:34:39] 2025-11-29 14:33:55,953 | INFO     | ***************************************
[2025-11-29 09:34:39] 2025-11-29 14:33:55,953 | INFO     | 
[2025-11-29 09:34:39] 2025-11-29 14:33:55,954 | INFO     | architecture information:
[2025-11-29 09:34:39] 2025-11-29 14:33:55,955 | INFO     | executing command: cat /etc/os-release
[2025-11-29 09:34:39] 2025-11-29 14:33:55,971 | INFO     | cat /etc/os-release:
[2025-11-29 09:34:39] NAME="CentOS Linux"
[2025-11-29 09:34:39] VERSION="7 (Core)"
[2025-11-29 09:34:39] ID="centos"
[2025-11-29 09:34:39] ID_LIKE="rhel fedora"
[2025-11-29 09:34:39] VERSION_ID="7"
[2025-11-29 09:34:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 09:34:39] ANSI_COLOR="0;31"
[2025-11-29 09:34:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 09:34:39] HOME_URL="https://www.centos.org/"
[2025-11-29 09:34:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 09:34:39] 
[2025-11-29 09:34:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 09:34:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 09:34:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 09:34:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 09:34:39] 
[2025-11-29 09:34:39] 2025-11-29 14:33:55,971 | INFO     | ***************************************
[2025-11-29 09:34:39] 2025-11-29 14:33:56,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-29 09:34:39] 2025-11-29 14:33:56,490 | INFO     | sufficient remaining disk space (28526510080 B)
[2025-11-29 09:34:39] 2025-11-29 14:33:56,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 09:34:39] 2025-11-29 14:33:56,491 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 09:34:39] 2025-11-29 14:33:56,491 | INFO     | update_server=False
[2025-11-29 09:34:39] 2025-11-29 14:33:56,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 09:34:39] 2025-11-29 14:33:56,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 09:34:39] 2025-11-29 14:33:56,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 09:34:39] 2025-11-29 14:33:56,829 | INFO     | all job control threads have been joined
[2025-11-29 09:34:39] 2025-11-29 14:33:57,225 | INFO     | all data control threads have been joined
[2025-11-29 09:34:39] 2025-11-29 14:33:57,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 09:34:39] 2025-11-29 14:33:57,250 | INFO     | aborting loop
[2025-11-29 09:34:39] 2025-11-29 14:33:57,494 | INFO     | [job] queue monitor thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:57,497 | INFO     | [job] retrieve thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:57,502 | INFO     | [payload] failed_post thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:57,752 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:57,834 | INFO     | [job] control thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:57,902 | INFO     | all payload control threads have been joined
[2025-11-29 09:34:39] 2025-11-29 14:33:57,971 | INFO     | [payload] validate_post thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:58,001 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 09:34:39] 2025-11-29 14:33:58,230 | INFO     | [data] control thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:58,255 | INFO     | [job] job monitor thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:58,324 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:58,446 | INFO     | [data] copytool_in thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:58,497 | INFO     | [data] copytool_out thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:58,597 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:58,819 | INFO     | [job] validate thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:33:58,908 | INFO     | [payload] control thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:34:02,007 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:34:07,368 | INFO     | job.realtimelogging is not enabled
[2025-11-29 09:34:39] 2025-11-29 14:34:08,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 09:34:39] 2025-11-29 14:34:26,948 | INFO     | PID=23621 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 09:34:39] 2025-11-29 14:34:26,949 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 09:34:39] 2025-11-29 14:34:26,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 09:34:39] 2025-11-29 14:34:26,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 09:34:39] 2025-11-29 14:34:33,365 | INFO     | [monitor] cgroup control has ended
[2025-11-29 09:34:39] 2025-11-29 14:34:34,371 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139994740422464)>', '<ExcThread(monitor, started 139994165397248)>']
[2025-11-29 09:34:39] 2025-11-29 14:34:34,989 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 09:34:39] 2025-11-29 14:34:34,989 | INFO     | [monitor] control thread has ended
[2025-11-29 09:34:39] 2025-11-29 14:34:39,382 | INFO     | all workflow threads have been joined
[2025-11-29 09:34:39] 2025-11-29 14:34:39,382 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 09:34:39] 2025-11-29 14:34:39,382 | INFO     | traces error code: 0
[2025-11-29 09:34:39] 2025-11-29 14:34:39,383 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 09:34:39] 2025-11-29 14:34:39,484 [wrapper] ==== pilot stdout END ====
[2025-11-29 09:34:39] 2025-11-29 14:34:39,487 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 09:34:39] 2025-11-29 14:34:39,491 [wrapper] pilotpid: 23621
[2025-11-29 09:34:39] 2025-11-29 14:34:39,494 [wrapper] Pilot exit status: 0
[2025-11-29 09:34:39] 2025-11-29 14:34:39,507 [wrapper] pandaids: 6897017160
[2025-11-29 09:34:39] 2025-11-29 14:34:39,553 [wrapper] cleanup supervisor_pilot 32257 23622
[2025-11-29 09:34:39] 2025-11-29 14:34:39,557 [wrapper] Test setup, not cleaning
[2025-11-29 09:34:39] 2025-11-29 14:34:39,561 [wrapper] apfmon messages muted
[2025-11-29 09:34:39] 2025-11-29 14:34:39,565 [wrapper] ==== wrapper stdout END ====
[2025-11-29 09:34:39] 2025-11-29 14:34:39,568 [wrapper] ==== wrapper stderr END ====
[2025-11-29 09:34:39]  *** Error codes and diagnostics ***
[2025-11-29 09:34:39]     "exeErrorCode": 0,
[2025-11-29 09:34:39]     "exeErrorDiag": "",
[2025-11-29 09:34:39]     "pilotErrorCode": 0,
[2025-11-29 09:34:39]     "pilotErrorDiag": "",
[2025-11-29 09:34:39]  *** Listing of results directory ***
[2025-11-29 09:34:39] total 1068904
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 05:28 pilot3.tar.gz
[2025-11-29 09:34:39] -rwx------ 1 boincer umatlas     36292 Nov 28 05:28 runpilot2-wrapper.sh
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 05:32 queuedata.json
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas       100 Nov 29 03:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 09:34:39] -rwxr-xr-x 1 boincer umatlas      7986 Nov 29 03:21 run_atlas
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas       105 Nov 29 03:21 job.xml
[2025-11-29 09:34:39] -rw-r--r-- 2 boincer umatlas 379003618 Nov 29 03:21 EVNT.47531050._000454.pool.root.1
[2025-11-29 09:34:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 03:21 start_atlas.sh
[2025-11-29 09:34:39] drwxrwx--x 2 boincer umatlas      4096 Nov 29 03:21 shared
[2025-11-29 09:34:39] -rw-r--r-- 2 boincer umatlas    590117 Nov 29 03:21 input.tar.gz
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas         0 Nov 29 03:21 boinc_lockfile
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas      2878 Nov 29 03:21 pandaJob.out
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas        57 Nov 29 03:21 setup.sh.local
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas    991818 Nov 29 03:21 agis_schedconf.cvmfs.json
[2025-11-29 09:34:39] drwx------ 5 boincer umatlas      4096 Nov 29 03:21 pilot3
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas       533 Nov 29 09:26 boinc_task_state.xml
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas      5956 Nov 29 09:30 init_data.xml
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas 700907005 Nov 29 09:33 HITS.47531058._000692.pool.root.1
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas      1060 Nov 29 09:33 memory_monitor_summary.json
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas   1516240 Nov 29 09:33 agis_ddmendpoints.agis.ALL.json
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas   2208969 Nov 29 09:33 log.47531058._000692.job.log.tgz.1
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas     27806 Nov 29 09:33 heartbeat.json
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas      8192 Nov 29 09:34 boinc_mmap_file
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas        29 Nov 29 09:34 wrapper_checkpoint.txt
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas        95 Nov 29 09:34 pilot_heartbeat.json
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas      4818 Nov 29 09:34 pilotlog.txt
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas   3135180 Nov 29 09:34 log.47531058._000692.job.log.1
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas       353 Nov 29 09:34 output.list
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas       620 Nov 29 09:34 runtime_log
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas   5386240 Nov 29 09:34 result.tar.gz
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas      9345 Nov 29 09:34 runtime_log.err
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas       670 Nov 29 09:34 9zLLDmXtAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMTOKDmmDqSUo.diag
[2025-11-29 09:34:39] -rw-r--r-- 1 boincer umatlas     21311 Nov 29 09:34 stderr.txt
[2025-11-29 09:34:39] HITS file was successfully produced:
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas 700907005 Nov 29 09:33 shared/HITS.pool.root.1
[2025-11-29 09:34:39]  *** Contents of shared directory: ***
[2025-11-29 09:34:39] total 1060464
[2025-11-29 09:34:39] -rw-r--r-- 2 boincer umatlas 379003618 Nov 29 03:21 ATLAS.root_0
[2025-11-29 09:34:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 03:21 start_atlas.sh
[2025-11-29 09:34:39] -rw-r--r-- 2 boincer umatlas    590117 Nov 29 03:21 input.tar.gz
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas 700907005 Nov 29 09:33 HITS.pool.root.1
[2025-11-29 09:34:39] -rw------- 1 boincer umatlas   5386240 Nov 29 09:34 result.tar.gz
09:34:41 (19916): run_atlas exited; CPU time 247342.543346
09:34:41 (19916): called boinc_finish(0)

</stderr_txt>
]]>

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