Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:22:53 (1408962): wrapper (7.7.26015): starting
00:22:53 (1408962): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 00:22:53] Arguments: --nthreads 12
[2025-11-29 00:22:53] Threads: 12
[2025-11-29 00:22:53] Checking for CVMFS
[2025-11-29 00:22:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 00:22:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 00:22:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 00:22:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 00:22:54] 2.11.5.0 831512 32346 315732 153436 0 249 37837458 45568001 15907 130560 0 170294764 99.761 118644791 22913 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-29 00:22:54] CVMFS is ok
[2025-11-29 00:22:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 00:22:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 00:22:54] Further information can be found at the LHC@home message board.
[2025-11-29 00:22:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 00:22:54] Checking for apptainer binary...
[2025-11-29 00:22:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 00:22:54] Running /usr/bin/apptainer --version
[2025-11-29 00:22:54] apptainer version 1.4.1-1.el9
[2025-11-29 00:22:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 00:22:54] wns0042.triumf.lcg
[2025-11-29 00:22:54] apptainer works
[2025-11-29 00:22:54] Set ATHENA_PROC_NUMBER=12
[2025-11-29 00:22:54] Set ATHENA_CORE_NUMBER=12
[2025-11-29 00:22:54] Starting ATLAS job with PandaID=6896262571
[2025-11-29 00:22:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 00:28:18]  *** The last 200 lines of the pilot log: ***
[2025-11-29 00:28:18] 2025-11-29 08:27:43,816 | INFO     | ..............................
[2025-11-29 00:28:18] 2025-11-29 08:27:43,816 | INFO     | . Timing measurements:
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . get job = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . initial setup = 3 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . payload setup = 14 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . stage-in = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . payload execution = 113 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . stage-out = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . log creation = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | ..............................
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 00:28:18] 2025-11-29 08:27:43,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896262571/pilotlog.txt
[2025-11-29 00:28:18] 2025-11-29 08:27:43,887 | INFO     | monitor loop #66: job 0:6896262571 is in state 'failed'
[2025-11-29 00:28:18] 2025-11-29 08:27:43,888 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-29 00:28:18] 2025-11-29 08:27:43,893 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-29 00:28:18] - Log from pilotlog.txt -
[2025-11-29 00:28:18] 2025-11-29 08:27:43,813 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 00:28:18] 2025-11-29 08:27:43,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 00:28:18] 2025-11-29 08:27:43,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 00:28:18] 2025-11-29 08:27:43,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 00:28:18] 2025-11-29 08:27:43,815 | WARNING  | wrong length of table data, x=[1764404630.0, 1764404691.0], y=[8938.0, 838187.0] (must be same and length>=4)
[2025-11-29 00:28:18] 2025-11-29 08:27:43,816 | INFO     | could have reported an average CPU frequency of 1443 MHz (4 samples)
[2025-11-29 00:28:18] 2025-11-29 08:27:43,816 | INFO     | ..............................
[2025-11-29 00:28:18] 2025-11-29 08:27:43,816 | INFO     | . Timing measurements:
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . get job = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . initial setup = 3 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . payload setup = 14 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . stage-in = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . payload execution = 113 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . stage-out = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . log creation = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | ..............................
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 00:28:18] 2025-11-29 08:27:43,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896262571/pilotlog.txt
[2025-11-29 00:28:18] 2025-11-29 08:27:43,887 | INFO     | monitor loop #66: job 0:6896262571 is in state 'failed'
[2025-11-29 00:28:18] 2025-11-29 08:27:43,888 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-29 00:28:18] 2025-11-29 08:27:43,893 | WARNING  | 
[2025-11-29 00:28:18] [begin log extracts]
[2025-11-29 00:28:18] - Log from pilotlog.txt -
[2025-11-29 00:28:18] 2025-11-29 08:27:43,813 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 00:28:18] 2025-11-29 08:27:43,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 00:28:18] 2025-11-29 08:27:43,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 00:28:18] 2025-11-29 08:27:43,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 00:28:18] 2025-11-29 08:27:43,815 | WARNING  | wrong length of table data, x=[1764404630.0, 1764404691.0], y=[8938.0, 838187.0] (must be same and length>=4)
[2025-11-29 00:28:18] 2025-11-29 08:27:43,816 | INFO     | could have reported an average CPU frequency of 1443 MHz (4 samples)
[2025-11-29 00:28:18] 2025-11-29 08:27:43,816 | INFO     | ..............................
[2025-11-29 00:28:18] 2025-11-29 08:27:43,816 | INFO     | . Timing measurements:
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . get job = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . initial setup = 3 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . payload setup = 14 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . stage-in = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . payload execution = 113 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . stage-out = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | . log creation = 0 s
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | ..............................
[2025-11-29 00:28:18] 2025-11-29 08:27:43,817 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 00:28:18] 2025-11-29 08:27:43,818 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6896262571/pilotlog.txt
[2025-11-29 00:28:18] 2025-11-29 08:27:43,887 | INFO     | monitor loop #66: job 0:6896262571 is in state 'failed'
[2025-11-29 00:28:18] 2025-11-29 08:27:43,888 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-11-29 00:28:18] [end log extracts]
[2025-11-29 00:28:18] 2025-11-29 08:27:43,894 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-29 00:28:18] 2025-11-29 08:27:43,895 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-29 00:28:18] 2025-11-29 08:27:44,309 | INFO     | 
[2025-11-29 00:28:18] 2025-11-29 08:27:44,309 | INFO     | job summary report
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | --------------------------------------------------
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | PanDA job id: 6896262571
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | task id: 47531058
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-29 00:25:30,788 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | pilot state: failed 
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | transexitcode: 65
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | exeerrorcode: 65
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-29 00:28:18] 2025-11-29 08:27:44,310 | INFO     | exitcode: 65
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | cpuconsumptiontime: 99 s
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | nevents: 0
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | neventsw: 0
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | pid: 1420237
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | pgrp: 1420237
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | corecount: 12
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | event service: False
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | sizes: {0: 2284276, 1: 2284475, 8: 2284737, 11: 2284765, 130: 2308397, 131: 2312687, 133: 2312871, 256: 2313065}
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | --------------------------------------------------
[2025-11-29 00:28:18] 2025-11-29 08:27:44,311 | INFO     | 
[2025-11-29 00:28:18] 2025-11-29 08:27:44,312 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-29 00:28:18] 2025-11-29 08:27:44,331 | INFO     | time since job start (274s) is within the limit (172800.0s)
[2025-11-29 00:28:18] 2025-11-29 08:27:44,331 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,332 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,332 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,332 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,332 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,332 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 00:28:18] 2025-11-29 08:27:44,333 | INFO     | job 6896262571 has completed (purged errors)
[2025-11-29 00:28:18] 2025-11-29 08:27:44,334 | INFO     | overall cleanup function is called
[2025-11-29 00:28:18] 2025-11-29 08:27:45,341 | INFO     | --- collectZombieJob: --- 10, [1420237]
[2025-11-29 00:28:18] 2025-11-29 08:27:45,341 | INFO     | zombie collector waiting for pid 1420237
[2025-11-29 00:28:18] 2025-11-29 08:27:45,341 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 00:28:18] 2025-11-29 08:27:45,341 | INFO     | collected zombie processes
[2025-11-29 00:28:18] 2025-11-29 08:27:45,342 | INFO     | will attempt to kill all subprocesses of pid=1420237
[2025-11-29 00:28:18] 2025-11-29 08:27:45,684 | INFO     | process IDs to be killed: [1420237] (in reverse order)
[2025-11-29 00:28:18] 2025-11-29 08:27:45,817 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 00:28:18] 2025-11-29 08:27:45,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 00:28:18] 2025-11-29 08:27:45,832 | INFO     | did not find any defunct processes belonging to 1420237
[2025-11-29 00:28:18] 2025-11-29 08:27:45,845 | INFO     | did not find any defunct processes belonging to 1420237
[2025-11-29 00:28:18] 2025-11-29 08:27:45,846 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 00:28:18] 2025-11-29 08:27:45,846 | INFO     | ready for new job
[2025-11-29 00:28:18] 2025-11-29 08:27:45,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 00:28:18] 2025-11-29 08:27:45,848 | INFO     | ***************************************
[2025-11-29 00:28:18] 2025-11-29 08:27:45,848 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 00:28:18] 2025-11-29 08:27:45,848 | INFO     | ***************************************
[2025-11-29 00:28:18] 2025-11-29 08:27:45,848 | INFO     | 
[2025-11-29 00:28:18] 2025-11-29 08:27:45,852 | INFO     | architecture information:
[2025-11-29 00:28:18] 2025-11-29 08:27:45,852 | INFO     | executing command: cat /etc/os-release
[2025-11-29 00:28:18] 2025-11-29 08:27:45,868 | INFO     | cat /etc/os-release:
[2025-11-29 00:28:18] NAME="CentOS Linux"
[2025-11-29 00:28:18] VERSION="7 (Core)"
[2025-11-29 00:28:18] ID="centos"
[2025-11-29 00:28:18] ID_LIKE="rhel fedora"
[2025-11-29 00:28:18] VERSION_ID="7"
[2025-11-29 00:28:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 00:28:18] ANSI_COLOR="0;31"
[2025-11-29 00:28:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 00:28:18] HOME_URL="https://www.centos.org/"
[2025-11-29 00:28:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 00:28:18] 
[2025-11-29 00:28:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 00:28:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 00:28:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 00:28:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 00:28:18] 
[2025-11-29 00:28:18] 2025-11-29 08:27:45,869 | INFO     | ***************************************
[2025-11-29 00:28:18] 2025-11-29 08:27:46,376 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-29 00:28:18] 2025-11-29 08:27:46,394 | INFO     | sufficient remaining disk space (2149769543680 B)
[2025-11-29 00:28:18] 2025-11-29 08:27:46,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 00:28:18] 2025-11-29 08:27:46,394 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 00:28:18] 2025-11-29 08:27:46,394 | INFO     | update_server=False
[2025-11-29 00:28:18] 2025-11-29 08:27:46,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 00:28:18] 2025-11-29 08:27:47,140 | INFO     | all job control threads have been joined
[2025-11-29 00:28:18] 2025-11-29 08:27:47,148 | INFO     | all data control threads have been joined
[2025-11-29 00:28:18] 2025-11-29 08:27:47,400 | INFO     | [job] retrieve thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:47,400 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 00:28:18] 2025-11-29 08:27:47,400 | INFO     | aborting loop
[2025-11-29 00:28:18] 2025-11-29 08:27:47,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 00:28:18] 2025-11-29 08:27:47,793 | INFO     | all payload control threads have been joined
[2025-11-29 00:28:18] 2025-11-29 08:27:47,996 | INFO     | [payload] failed_post thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,146 | INFO     | [job] control thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,154 | INFO     | [data] control thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,256 | INFO     | [job] validate thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,287 | INFO     | [data] copytool_in thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,405 | INFO     | [job] job monitor thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,470 | INFO     | [payload] validate_post thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,628 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 00:28:18] 2025-11-29 08:27:48,798 | INFO     | [payload] control thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,820 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:48,877 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:49,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 00:28:18] 2025-11-29 08:27:49,750 | INFO     | [data] copytool_out thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:50,020 | INFO     | [job] queue monitor thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:27:52,796 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 00:28:18] 2025-11-29 08:28:09,999 | INFO     | [monitor] cgroup control has ended
[2025-11-29 00:28:18] 2025-11-29 08:28:10,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139701131601728)>', '<ExcThread(monitor, started 139700811568896)>']
[2025-11-29 00:28:18] 2025-11-29 08:28:15,507 | INFO     | all workflow threads have been joined
[2025-11-29 00:28:18] 2025-11-29 08:28:15,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 00:28:18] 2025-11-29 08:28:15,508 | INFO     | traces error code: 0
[2025-11-29 00:28:18] 2025-11-29 08:28:15,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 00:28:18] 2025-11-29 08:28:17,823 | INFO     | PID=1412889 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 00:28:18] 2025-11-29 08:28:17,823 | INFO     | .. there are 35 such processes running
[2025-11-29 00:28:18] 2025-11-29 08:28:17,824 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 00:28:18] 2025-11-29 08:28:17,824 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 00:28:18] 2025-11-29 08:28:17,824 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 00:28:18] 2025-11-29 08:28:17,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 00:28:18] 2025-11-29 08:28:17,824 | INFO     | [monitor] control thread has ended
[2025-11-29 00:28:18] 2025-11-29 08:28:17,957 [wrapper] ==== pilot stdout END ====
[2025-11-29 00:28:18] 2025-11-29 08:28:17,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 00:28:18] 2025-11-29 08:28:17,967 [wrapper] pilotpid: 1412889
[2025-11-29 00:28:18] 2025-11-29 08:28:17,970 [wrapper] Pilot exit status: 0
[2025-11-29 00:28:18] 2025-11-29 08:28:17,982 [wrapper] pandaids: 6896262571
[2025-11-29 00:28:18] 2025-11-29 08:28:18,058 [wrapper] cleanup supervisor_pilot 1412895 1412890
[2025-11-29 00:28:18] 2025-11-29 08:28:18,062 [wrapper] Test setup, not cleaning
[2025-11-29 00:28:18] 2025-11-29 08:28:18,065 [wrapper] apfmon messages muted
[2025-11-29 00:28:18] 2025-11-29 08:28:18,067 [wrapper] ==== wrapper stdout END ====
[2025-11-29 00:28:18] 2025-11-29 08:28:18,070 [wrapper] ==== wrapper stderr END ====
[2025-11-29 00:28:18]  *** Error codes and diagnostics ***
[2025-11-29 00:28:18]     "exeErrorCode": 65,
[2025-11-29 00:28:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-29 00:28:18]     "pilotErrorCode": 1305,
[2025-11-29 00:28:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-29 00:28:18]  *** Listing of results directory ***
[2025-11-29 00:28:18] total 372720
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc    576529 Nov 28 02:28 pilot3.tar.gz
[2025-11-29 00:28:18] -rwx------. 1 boinc boinc     36292 Nov 28 02:28 runpilot2-wrapper.sh
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc      5112 Nov 28 02:32 queuedata.json
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc       100 Nov 29 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 00:28:18] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 00:22 run_atlas
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc       105 Nov 29 00:22 job.xml
[2025-11-29 00:28:18] -rw-r--r--. 2 boinc boinc 377444384 Nov 29 00:22 EVNT.47531050._000424.pool.root.1
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc      6596 Nov 29 00:22 init_data.xml
[2025-11-29 00:28:18] -rw-r--r--. 2 boinc boinc     15847 Nov 29 00:22 start_atlas.sh
[2025-11-29 00:28:18] drwxrwx--x. 2 boinc boinc      4096 Nov 29 00:22 shared
[2025-11-29 00:28:18] -rw-r--r--. 2 boinc boinc    590124 Nov 29 00:22 input.tar.gz
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc         0 Nov 29 00:22 boinc_lockfile
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc      2879 Nov 29 00:22 pandaJob.out
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc    991818 Nov 29 00:23 agis_schedconf.cvmfs.json
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc   1516240 Nov 29 00:23 agis_ddmendpoints.agis.ALL.json
[2025-11-29 00:28:18] drwx------. 5 boinc boinc      4096 Nov 29 00:23 pilot3
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc       524 Nov 29 00:24 boinc_task_state.xml
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc       991 Nov 29 00:25 memory_monitor_summary.json
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc     50707 Nov 29 00:25 log.47531058._000405.job.log.tgz.1
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc      9886 Nov 29 00:27 heartbeat.json
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc      8192 Nov 29 00:28 boinc_mmap_file
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc        23 Nov 29 00:28 wrapper_checkpoint.txt
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc        95 Nov 29 00:28 pilot_heartbeat.json
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc       823 Nov 29 00:28 pilotlog.txt
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc    102933 Nov 29 00:28 log.47531058._000405.job.log.1
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc       186 Nov 29 00:28 output.list
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc       620 Nov 29 00:28 runtime_log
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc    174080 Nov 29 00:28 result.tar.gz
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc       647 Nov 29 00:28 WYaNDmUtAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8CLKDmCPrdXo.diag
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc      8636 Nov 29 00:28 runtime_log.err
[2025-11-29 00:28:18] -rw-r--r--. 1 boinc boinc     22447 Nov 29 00:28 stderr.txt
[2025-11-29 00:28:18] No HITS result produced
[2025-11-29 00:28:18]  *** Contents of shared directory: ***
[2025-11-29 00:28:18] total 369372
[2025-11-29 00:28:18] -rw-r--r--. 2 boinc boinc 377444384 Nov 29 00:22 ATLAS.root_0
[2025-11-29 00:28:18] -rw-r--r--. 2 boinc boinc     15847 Nov 29 00:22 start_atlas.sh
[2025-11-29 00:28:18] -rw-r--r--. 2 boinc boinc    590124 Nov 29 00:22 input.tar.gz
[2025-11-29 00:28:18] -rw-------. 1 boinc boinc    174080 Nov 29 00:28 result.tar.gz
00:28:19 (1408962): run_atlas exited; CPU time 97.104296
00:28:19 (1408962): called boinc_finish(0)

</stderr_txt>
]]>

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