Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:20:46 (9072): wrapper (7.7.26015): starting
01:20:46 (9072): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 01:20:46] Arguments: --nthreads 12
[2025-11-29 01:20:46] Threads: 12
[2025-11-29 01:20:46] Checking for CVMFS
[2025-11-29 01:20:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 01:20:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 01:20:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 01:20:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 01:20:47] 2.11.2.0 2981 291588 92828 153433 2 80 12808835 20275200 1 130560 1 132526404 99.969 16960455 14284 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 01:20:47] CVMFS is ok
[2025-11-29 01:20:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 01:20:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 01:20:47] Further information can be found at the LHC@home message board.
[2025-11-29 01:20:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 01:20:47] Checking for apptainer binary...
[2025-11-29 01:20:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 01:20:47] Running /usr/bin/apptainer --version
[2025-11-29 01:20:47] apptainer version 1.3.2-1.el7
[2025-11-29 01:20:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 01:20:48] c-205-30.aglt2.org
[2025-11-29 01:20:48] apptainer works
[2025-11-29 01:20:48] Set ATHENA_PROC_NUMBER=12
[2025-11-29 01:20:48] Set ATHENA_CORE_NUMBER=12
[2025-11-29 01:20:48] Starting ATLAS job with PandaID=6891591086
[2025-11-29 01:20:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 08:31:51]  *** The last 200 lines of the pilot log: ***
[2025-11-29 08:31:51] 2025-11-29 13:31:10,082 | INFO     | extracted standard info from prmon json
[2025-11-29 08:31:51] 2025-11-29 13:31:10,082 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 08:31:51] 2025-11-29 13:31:10,082 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 08:31:51] 2025-11-29 13:31:10,088 | INFO     | fitting pss+swap vs Time
[2025-11-29 08:31:51] 2025-11-29 13:31:10,089 | INFO     | sum of square deviations: 23469139715.394703
[2025-11-29 08:31:51] 2025-11-29 13:31:10,093 | INFO     | sum of deviations: 261700411542.9032
[2025-11-29 08:31:51] 2025-11-29 13:31:10,093 | INFO     | mean x: 1764410162.2600472
[2025-11-29 08:31:51] 2025-11-29 13:31:10,093 | INFO     | mean y: 3427176.8463356975
[2025-11-29 08:31:51] 2025-11-29 13:31:10,094 | INFO     | intersect: -19671212421.9392
[2025-11-29 08:31:51] 2025-11-29 13:31:10,094 | INFO     | chi2: 6.765668571464665
[2025-11-29 08:31:51] 2025-11-29 13:31:10,095 | INFO     | sum of square deviations: 22646729937.552902
[2025-11-29 08:31:51] 2025-11-29 13:31:10,098 | INFO     | sum of deviations: 440980718345.26337
[2025-11-29 08:31:51] 2025-11-29 13:31:10,099 | INFO     | mean x: 1764410009.7631578
[2025-11-29 08:31:51] 2025-11-29 13:31:10,099 | INFO     | mean y: 3460394.6794258375
[2025-11-29 08:31:51] 2025-11-29 13:31:10,099 | INFO     | intersect: -34353411246.675304
[2025-11-29 08:31:51] 2025-11-29 13:31:10,099 | INFO     | chi2: 3.1158592437274613
[2025-11-29 08:31:51] 2025-11-29 13:31:10,099 | INFO     | current chi2=3.1158592437274613 (change=53.94602601627403 %)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,100 | INFO     | sum of square deviations: 21843762384.70209
[2025-11-29 08:31:51] 2025-11-29 13:31:10,103 | INFO     | sum of deviations: 516777856724.60767
[2025-11-29 08:31:51] 2025-11-29 13:31:10,104 | INFO     | mean x: 1764409857.2663438
[2025-11-29 08:31:51] 2025-11-29 13:31:10,104 | INFO     | mean y: 3474764.0581113803
[2025-11-29 08:31:51] 2025-11-29 13:31:10,104 | INFO     | intersect: -41738782286.88112
[2025-11-29 08:31:51] 2025-11-29 13:31:10,104 | INFO     | chi2: 2.3230762401578913
[2025-11-29 08:31:51] 2025-11-29 13:31:10,104 | INFO     | current chi2=2.3230762401578913 (change=25.44347936016436 %)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,105 | INFO     | sum of square deviations: 21060004494.343227
[2025-11-29 08:31:51] 2025-11-29 13:31:10,108 | INFO     | sum of deviations: 508672065136.42645
[2025-11-29 08:31:51] 2025-11-29 13:31:10,109 | INFO     | mean x: 1764409704.7696078
[2025-11-29 08:31:51] 2025-11-29 13:31:10,109 | INFO     | mean y: 3473180.7279411764
[2025-11-29 08:31:51] 2025-11-29 13:31:10,109 | INFO     | intersect: -42613133502.00004
[2025-11-29 08:31:51] 2025-11-29 13:31:10,109 | INFO     | chi2: 2.314282019532079
[2025-11-29 08:31:51] 2025-11-29 13:31:10,109 | INFO     | current chi2=2.314282019532079 (change=0.3785592772975261 %)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,110 | INFO     | right removable region: 407
[2025-11-29 08:31:51] 2025-11-29 13:31:10,110 | INFO     | sum of square deviations: 22646688518.07662
[2025-11-29 08:31:51] 2025-11-29 13:31:10,114 | INFO     | sum of deviations: 131883171770.50272
[2025-11-29 08:31:51] 2025-11-29 13:31:10,114 | INFO     | mean x: 1764410314.7607656
[2025-11-29 08:31:51] 2025-11-29 13:31:10,114 | INFO     | mean y: 3451160.5550239235
[2025-11-29 08:31:51] 2025-11-29 13:31:10,114 | INFO     | intersect: -10271606423.669819
[2025-11-29 08:31:51] 2025-11-29 13:31:10,115 | INFO     | chi2: 4.601647350919755
[2025-11-29 08:31:51] 2025-11-29 13:31:10,115 | INFO     | current chi2=4.601647350919755 (change=31.985327062458097 %)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,115 | INFO     | sum of square deviations: 21843679423.75766
[2025-11-29 08:31:51] 2025-11-29 13:31:10,119 | INFO     | sum of deviations: 100850098598.54257
[2025-11-29 08:31:51] 2025-11-29 13:31:10,119 | INFO     | mean x: 1764410467.2615013
[2025-11-29 08:31:51] 2025-11-29 13:31:10,119 | INFO     | mean y: 3457047.254237288
[2025-11-29 08:31:51] 2025-11-29 13:31:10,120 | INFO     | intersect: -8142650856.073191
[2025-11-29 08:31:51] 2025-11-29 13:31:10,120 | INFO     | chi2: 4.544722474960823
[2025-11-29 08:31:51] 2025-11-29 13:31:10,120 | INFO     | current chi2=4.544722474960823 (change=1.2370542898632726 %)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,120 | INFO     | left removable region: 20
[2025-11-29 08:31:51] 2025-11-29 13:31:10,121 | INFO     | sum of square deviations: 17972500837.41604
[2025-11-29 08:31:51] 2025-11-29 13:31:10,124 | INFO     | sum of deviations: 308468705026.87836
[2025-11-29 08:31:51] 2025-11-29 13:31:10,124 | INFO     | mean x: 1764410284.2764857
[2025-11-29 08:31:51] 2025-11-29 13:31:10,124 | INFO     | mean y: 3512827.6459948323
[2025-11-29 08:31:51] 2025-11-29 13:31:10,125 | INFO     | intersect: -30279716003.46889
[2025-11-29 08:31:51] 2025-11-29 13:31:10,125 | INFO     | chi2: 0.025705077777900813
[2025-11-29 08:31:51] 2025-11-29 13:31:10,125 | INFO     | current memory leak: 17.16 B/s (using 387 data points, chi2=0.03)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,125 | INFO     | could have reported an average CPU frequency of 2364 MHz (18 samples)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,126 | INFO     | ..............................
[2025-11-29 08:31:51] 2025-11-29 13:31:10,126 | INFO     | . Timing measurements:
[2025-11-29 08:31:51] 2025-11-29 13:31:10,126 | INFO     | . get job = 0 s
[2025-11-29 08:31:51] 2025-11-29 13:31:10,126 | INFO     | . initial setup = 2 s
[2025-11-29 08:31:51] 2025-11-29 13:31:10,126 | INFO     | . payload setup = 7 s
[2025-11-29 08:31:51] 2025-11-29 13:31:10,126 | INFO     | . stage-in = 0 s
[2025-11-29 08:31:51] 2025-11-29 13:31:10,126 | INFO     | . payload execution = 25771 s
[2025-11-29 08:31:51] 2025-11-29 13:31:10,126 | INFO     | . stage-out = 3 s
[2025-11-29 08:31:51] 2025-11-29 13:31:10,126 | INFO     | . log creation = 0 s
[2025-11-29 08:31:51] 2025-11-29 13:31:10,127 | INFO     | ..............................
[2025-11-29 08:31:51] 2025-11-29 13:31:10,206 | INFO     | 
[2025-11-29 08:31:51] 2025-11-29 13:31:10,207 | INFO     | job summary report
[2025-11-29 08:31:51] 2025-11-29 13:31:10,207 | INFO     | --------------------------------------------------
[2025-11-29 08:31:51] 2025-11-29 13:31:10,207 | INFO     | PanDA job id: 6891591086
[2025-11-29 08:31:51] 2025-11-29 13:31:10,207 | INFO     | task id: 47493068
[2025-11-29 08:31:51] 2025-11-29 13:31:10,207 | INFO     | errors: (none)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,207 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 08:31:51] 2025-11-29 13:31:10,208 | INFO     | pilot state: finished 
[2025-11-29 08:31:51] 2025-11-29 13:31:10,208 | INFO     | transexitcode: 0
[2025-11-29 08:31:51] 2025-11-29 13:31:10,208 | INFO     | exeerrorcode: 0
[2025-11-29 08:31:51] 2025-11-29 13:31:10,208 | INFO     | exeerrordiag: 
[2025-11-29 08:31:51] 2025-11-29 13:31:10,208 | INFO     | exitcode: 0
[2025-11-29 08:31:51] 2025-11-29 13:31:10,208 | INFO     | exitmsg: OK
[2025-11-29 08:31:51] 2025-11-29 13:31:10,209 | INFO     | cpuconsumptiontime: 294980 s
[2025-11-29 08:31:51] 2025-11-29 13:31:10,209 | INFO     | nevents: 1000
[2025-11-29 08:31:51] 2025-11-29 13:31:10,209 | INFO     | neventsw: 0
[2025-11-29 08:31:51] 2025-11-29 13:31:10,209 | INFO     | pid: 20076
[2025-11-29 08:31:51] 2025-11-29 13:31:10,209 | INFO     | pgrp: 20076
[2025-11-29 08:31:51] 2025-11-29 13:31:10,209 | INFO     | corecount: 12
[2025-11-29 08:31:51] 2025-11-29 13:31:10,209 | INFO     | event service: False
[2025-11-29 08:31:51] 2025-11-29 13:31:10,209 | INFO     | sizes: {0: 2284127, 1: 2284326, 5: 2284588, 11: 2284644, 25782: 2321867, 25786: 2331045, 25791: 2331235}
[2025-11-29 08:31:51] 2025-11-29 13:31:10,210 | INFO     | --------------------------------------------------
[2025-11-29 08:31:51] 2025-11-29 13:31:10,210 | INFO     | 
[2025-11-29 08:31:51] 2025-11-29 13:31:10,210 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-29 08:31:51] 2025-11-29 13:31:10,234 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,234 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,234 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,235 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 08:31:51] 2025-11-29 13:31:10,237 | INFO     | job 6891591086 has completed (purged errors)
[2025-11-29 08:31:51] 2025-11-29 13:31:10,238 | INFO     | overall cleanup function is called
[2025-11-29 08:31:51] 2025-11-29 13:31:11,254 | INFO     | --- collectZombieJob: --- 10, [20076]
[2025-11-29 08:31:51] 2025-11-29 13:31:11,254 | INFO     | zombie collector waiting for pid 20076
[2025-11-29 08:31:51] 2025-11-29 13:31:11,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 08:31:51] 2025-11-29 13:31:11,255 | INFO     | collected zombie processes
[2025-11-29 08:31:51] 2025-11-29 13:31:11,255 | INFO     | will attempt to kill all subprocesses of pid=20076
[2025-11-29 08:31:51] 2025-11-29 13:31:11,345 | INFO     | process IDs to be killed: [20076] (in reverse order)
[2025-11-29 08:31:51] 2025-11-29 13:31:11,398 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 08:31:51] 2025-11-29 13:31:11,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 08:31:51] 2025-11-29 13:31:11,401 | INFO     | did not find any defunct processes belonging to 20076
[2025-11-29 08:31:51] 2025-11-29 13:31:11,403 | INFO     | did not find any defunct processes belonging to 20076
[2025-11-29 08:31:51] 2025-11-29 13:31:11,405 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 08:31:51] 2025-11-29 13:31:11,405 | INFO     | ready for new job
[2025-11-29 08:31:51] 2025-11-29 13:31:11,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 08:31:51] 2025-11-29 13:31:11,407 | INFO     | ***************************************
[2025-11-29 08:31:51] 2025-11-29 13:31:11,407 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 08:31:51] 2025-11-29 13:31:11,407 | INFO     | ***************************************
[2025-11-29 08:31:51] 2025-11-29 13:31:11,408 | INFO     | 
[2025-11-29 08:31:51] 2025-11-29 13:31:11,408 | INFO     | architecture information:
[2025-11-29 08:31:51] 2025-11-29 13:31:11,409 | INFO     | executing command: cat /etc/os-release
[2025-11-29 08:31:51] 2025-11-29 13:31:11,426 | INFO     | cat /etc/os-release:
[2025-11-29 08:31:51] NAME="CentOS Linux"
[2025-11-29 08:31:51] VERSION="7 (Core)"
[2025-11-29 08:31:51] ID="centos"
[2025-11-29 08:31:51] ID_LIKE="rhel fedora"
[2025-11-29 08:31:51] VERSION_ID="7"
[2025-11-29 08:31:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 08:31:51] ANSI_COLOR="0;31"
[2025-11-29 08:31:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 08:31:51] HOME_URL="https://www.centos.org/"
[2025-11-29 08:31:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 08:31:51] 
[2025-11-29 08:31:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 08:31:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 08:31:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 08:31:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 08:31:51] 
[2025-11-29 08:31:51] 2025-11-29 13:31:11,426 | INFO     | ***************************************
[2025-11-29 08:31:51] 2025-11-29 13:31:11,929 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-29 08:31:51] 2025-11-29 13:31:11,946 | INFO     | sufficient remaining disk space (28241297408 B)
[2025-11-29 08:31:51] 2025-11-29 13:31:11,946 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 08:31:51] 2025-11-29 13:31:11,947 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 08:31:51] 2025-11-29 13:31:11,947 | INFO     | update_server=False
[2025-11-29 08:31:51] 2025-11-29 13:31:11,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 08:31:51] 2025-11-29 13:31:11,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 08:31:51] 2025-11-29 13:31:12,523 | INFO     | all payload control threads have been joined
[2025-11-29 08:31:51] 2025-11-29 13:31:12,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 08:31:51] 2025-11-29 13:31:12,827 | INFO     | all data control threads have been joined
[2025-11-29 08:31:51] 2025-11-29 13:31:12,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 08:31:51] 2025-11-29 13:31:12,856 | INFO     | aborting loop
[2025-11-29 08:31:51] 2025-11-29 13:31:12,952 | INFO     | [job] retrieve thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:12,953 | INFO     | [job] queue monitor thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,059 | INFO     | [data] copytool_in thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,237 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,328 | INFO     | [payload] validate_post thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,529 | INFO     | [payload] control thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,580 | INFO     | all job control threads have been joined
[2025-11-29 08:31:51] 2025-11-29 13:31:13,789 | INFO     | [job] validate thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,833 | INFO     | [data] control thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,861 | INFO     | [job] job monitor thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,885 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,916 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:13,924 | INFO     | [payload] failed_post thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:14,079 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:14,585 | INFO     | [job] control thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:14,673 | INFO     | [data] copytool_out thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:15,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 08:31:51] 2025-11-29 13:31:19,249 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 08:31:51] 2025-11-29 13:31:41,886 | INFO     | PID=13434 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 08:31:51] 2025-11-29 13:31:41,886 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 08:31:51] 2025-11-29 13:31:41,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 08:31:51] 2025-11-29 13:31:41,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 08:31:51] 2025-11-29 13:31:44,622 | INFO     | [monitor] cgroup control has ended
[2025-11-29 08:31:51] 2025-11-29 13:31:46,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139641090774848)>', '<ExcThread(monitor, started 139640510076672)>']
[2025-11-29 08:31:51] 2025-11-29 13:31:46,911 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 08:31:51] 2025-11-29 13:31:46,911 | INFO     | [monitor] control thread has ended
[2025-11-29 08:31:51] 2025-11-29 13:31:51,201 | INFO     | all workflow threads have been joined
[2025-11-29 08:31:51] 2025-11-29 13:31:51,201 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 08:31:51] 2025-11-29 13:31:51,201 | INFO     | traces error code: 0
[2025-11-29 08:31:51] 2025-11-29 13:31:51,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 08:31:51] 2025-11-29 13:31:51,282 [wrapper] ==== pilot stdout END ====
[2025-11-29 08:31:51] 2025-11-29 13:31:51,285 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 08:31:51] 2025-11-29 13:31:51,289 [wrapper] pilotpid: 13434
[2025-11-29 08:31:51] 2025-11-29 13:31:51,292 [wrapper] Pilot exit status: 0
[2025-11-29 08:31:51] 2025-11-29 13:31:51,307 [wrapper] pandaids: 6891591086
[2025-11-29 08:31:51] 2025-11-29 13:31:51,345 [wrapper] cleanup supervisor_pilot 11554 13435
[2025-11-29 08:31:51] 2025-11-29 13:31:51,349 [wrapper] Test setup, not cleaning
[2025-11-29 08:31:51] 2025-11-29 13:31:51,353 [wrapper] apfmon messages muted
[2025-11-29 08:31:51] 2025-11-29 13:31:51,357 [wrapper] ==== wrapper stdout END ====
[2025-11-29 08:31:51] 2025-11-29 13:31:51,361 [wrapper] ==== wrapper stderr END ====
[2025-11-29 08:31:51]  *** Error codes and diagnostics ***
[2025-11-29 08:31:51]     "exeErrorCode": 0,
[2025-11-29 08:31:51]     "exeErrorDiag": "",
[2025-11-29 08:31:51]     "pilotErrorCode": 0,
[2025-11-29 08:31:51]     "pilotErrorDiag": "",
[2025-11-29 08:31:51]  *** Listing of results directory ***
[2025-11-29 08:31:51] total 1316544
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 12:59 pilot3.tar.gz
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 13:03 queuedata.json
[2025-11-29 08:31:51] -rwx------ 1 boincer umatlas     36292 Nov 18 13:04 runpilot2-wrapper.sh
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas       100 Nov 29 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 08:31:51] -rwxr-xr-x 1 boincer umatlas      7986 Nov 29 01:20 run_atlas
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas       105 Nov 29 01:20 job.xml
[2025-11-29 08:31:51] -rw-r--r-- 2 boincer umatlas 410807282 Nov 29 01:20 EVNT.47493065._000611.pool.root.1
[2025-11-29 08:31:51] -rw-r--r-- 2 boincer umatlas     15120 Nov 29 01:20 start_atlas.sh
[2025-11-29 08:31:51] drwxrwx--x 2 boincer umatlas      4096 Nov 29 01:20 shared
[2025-11-29 08:31:51] -rw-r--r-- 2 boincer umatlas    590089 Nov 29 01:20 input.tar.gz
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas         0 Nov 29 01:20 boinc_lockfile
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas      2770 Nov 29 01:20 pandaJob.out
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas    991818 Nov 29 01:21 agis_schedconf.cvmfs.json
[2025-11-29 08:31:51] drwx------ 5 boincer umatlas      4096 Nov 29 01:21 pilot3
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas       532 Nov 29 08:19 boinc_task_state.xml
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas      5955 Nov 29 08:29 init_data.xml
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas 921837835 Nov 29 08:30 HITS.47493068._005601.pool.root.1
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas      1063 Nov 29 08:30 memory_monitor_summary.json
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas   1516240 Nov 29 08:31 agis_ddmendpoints.agis.ALL.json
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas   2170907 Nov 29 08:31 log.47493068._005601.job.log.tgz.1
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas        95 Nov 29 08:31 pilot_heartbeat.json
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas      8665 Nov 29 08:31 heartbeat.json
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas      8192 Nov 29 08:31 boinc_mmap_file
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas        29 Nov 29 08:31 wrapper_checkpoint.txt
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas      4746 Nov 29 08:31 pilotlog.txt
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas   3616380 Nov 29 08:31 log.47493068._005601.job.log.1
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas       353 Nov 29 08:31 output.list
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas       620 Nov 29 08:31 runtime_log
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas   5806080 Nov 29 08:31 result.tar.gz
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas      8706 Nov 29 08:31 runtime_log.err
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas       670 Nov 29 08:31 fEOKDmPFff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhAGKDmhACY4m.diag
[2025-11-29 08:31:51] -rw-r--r-- 1 boincer umatlas     21095 Nov 29 08:31 stderr.txt
[2025-11-29 08:31:51] HITS file was successfully produced:
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas 921837835 Nov 29 08:30 shared/HITS.pool.root.1
[2025-11-29 08:31:51]  *** Contents of shared directory: ***
[2025-11-29 08:31:51] total 1307692
[2025-11-29 08:31:51] -rw-r--r-- 2 boincer umatlas 410807282 Nov 29 01:20 ATLAS.root_0
[2025-11-29 08:31:51] -rw-r--r-- 2 boincer umatlas     15120 Nov 29 01:20 start_atlas.sh
[2025-11-29 08:31:51] -rw-r--r-- 2 boincer umatlas    590089 Nov 29 01:20 input.tar.gz
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas 921837835 Nov 29 08:30 HITS.pool.root.1
[2025-11-29 08:31:51] -rw------- 1 boincer umatlas   5806080 Nov 29 08:31 result.tar.gz
08:31:52 (9072): run_atlas exited; CPU time 288225.518716
08:31:52 (9072): called boinc_finish(0)

</stderr_txt>
]]>

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