Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:14:21 (3498371): wrapper (7.7.26015): starting
07:14:21 (3498371): wrapper: running run_atlas (--nthreads 8)
[2025-11-29 07:14:21] Arguments: --nthreads 8
[2025-11-29 07:14:21] Threads: 8
[2025-11-29 07:14:21] Checking for CVMFS
[2025-11-29 07:14:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 07:14:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 07:14:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 07:14:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 07:14:22] 2.13.2.0 6384 38744 294396 153442 1 320 25888251 40960001 9567 16776704 0 44963435 99.776 26476483 38483 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 07:14:22] CVMFS is ok
[2025-11-29 07:14:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 07:14:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 07:14:22] Further information can be found at the LHC@home message board.
[2025-11-29 07:14:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 07:14:22] Checking for apptainer binary...
[2025-11-29 07:14:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 07:14:22] Running /usr/bin/apptainer --version
[2025-11-29 07:14:22] apptainer version 1.4.4-1.el9
[2025-11-29 07:14:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 07:14:22] c-210-33-2.aglt2.org
[2025-11-29 07:14:22] apptainer works
[2025-11-29 07:14:22] Set ATHENA_PROC_NUMBER=8
[2025-11-29 07:14:22] Set ATHENA_CORE_NUMBER=8
[2025-11-29 07:14:22] Starting ATLAS job with PandaID=6893855466
[2025-11-29 07:14:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 18:08:27]  *** The last 200 lines of the pilot log: ***
[2025-11-30 18:08:27] 2025-11-30 23:07:22,257 | INFO     | monitor loop #7927: job 0:6893855466 is in state 'finished'
[2025-11-30 18:08:27] 2025-11-30 23:07:22,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 18:08:27] 2025-11-30 23:07:22,309 | INFO     | time since job start (125568s) is within the limit (172800.0s)
[2025-11-30 18:08:27] 2025-11-30 23:07:24,316 | INFO     | time since job start (125570s) is within the limit (172800.0s)
[2025-11-30 18:08:27] 2025-11-30 23:07:24,772 | INFO     | monitor loop #7928: job 0:6893855466 is in state 'finished'
[2025-11-30 18:08:27] 2025-11-30 23:07:24,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 18:08:27] 2025-11-30 23:07:26,336 | INFO     | time since job start (125572s) is within the limit (172800.0s)
[2025-11-30 18:08:27] 2025-11-30 23:07:26,550 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-30 18:08:27] 2025-11-30 23:07:26,589 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2572.344196428571
[2025-11-30 18:08:27] 2025-11-30 23:07:26,721 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893855466/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 18:08:27] 2025-11-30 23:07:26,722 | INFO     | extracted standard info from prmon json
[2025-11-30 18:08:27] 2025-11-30 23:07:26,722 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 18:08:27] 2025-11-30 23:07:26,722 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 18:08:27] 2025-11-30 23:07:26,935 | INFO     | fitting pss+swap vs Time
[2025-11-30 18:08:27] 2025-11-30 23:07:26,942 | INFO     | sum of square deviations: 2698895089843.8193
[2025-11-30 18:08:27] 2025-11-30 23:07:27,081 | INFO     | sum of deviations: 7421648724996.646
[2025-11-30 18:08:27] 2025-11-30 23:07:27,081 | INFO     | mean x: 1764481212.4287798
[2025-11-30 18:08:27] 2025-11-30 23:07:27,081 | INFO     | mean y: 2968848.826932426
[2025-11-30 18:08:27] 2025-11-30 23:07:27,081 | INFO     | intersect: -4849150001.506149
[2025-11-30 18:08:27] 2025-11-30 23:07:27,083 | INFO     | chi2: 10.404322233110394
[2025-11-30 18:08:27] 2025-11-30 23:07:27,090 | INFO     | sum of square deviations: 2679264444934.89
[2025-11-30 18:08:27] 2025-11-30 23:07:27,293 | INFO     | monitor loop #7929: job 0:6893855466 is in state 'finished'
[2025-11-30 18:08:27] 2025-11-30 23:07:27,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 18:08:27] 2025-11-30 23:07:27,295 | INFO     | sum of deviations: 8160183920235.979
[2025-11-30 18:08:27] 2025-11-30 23:07:27,295 | INFO     | mean x: 1764481059.9371345
[2025-11-30 18:08:27] 2025-11-30 23:07:27,295 | INFO     | mean y: 2974585.891325536
[2025-11-30 18:08:27] 2025-11-30 23:07:27,295 | INFO     | intersect: -5371071264.670411
[2025-11-30 18:08:27] 2025-11-30 23:07:27,302 | INFO     | chi2: 7.003238281005227
[2025-11-30 18:08:27] 2025-11-30 23:07:27,303 | INFO     | current chi2=7.003238281005227 (change=32.68914472181246 %)
[2025-11-30 18:08:27] 2025-11-30 23:07:27,314 | INFO     | sum of square deviations: 2659728868663.3467
[2025-11-30 18:08:27] 2025-11-30 23:07:27,628 | INFO     | sum of deviations: 8621880083948.697
[2025-11-30 18:08:27] 2025-11-30 23:07:27,629 | INFO     | mean x: 1764480907.4440644
[2025-11-30 18:08:27] 2025-11-30 23:07:27,629 | INFO     | mean y: 2978188.59110894
[2025-11-30 18:08:27] 2025-11-30 23:07:27,629 | INFO     | intersect: -5716831440.743443
[2025-11-30 18:08:27] 2025-11-30 23:07:27,640 | INFO     | chi2: 5.42268044558853
[2025-11-30 18:08:27] 2025-11-30 23:07:27,641 | INFO     | current chi2=5.42268044558853 (change=22.568956988135312 %)
[2025-11-30 18:08:27] 2025-11-30 23:07:27,641 | INFO     | right removable region: 2046
[2025-11-30 18:08:27] 2025-11-30 23:07:27,652 | INFO     | sum of square deviations: 2679260142604.8896
[2025-11-30 18:08:27] 2025-11-30 23:07:27,863 | INFO     | sum of deviations: 6915975291326.16
[2025-11-30 18:08:27] 2025-11-30 23:07:27,863 | INFO     | mean x: 1764481364.9371345
[2025-11-30 18:08:27] 2025-11-30 23:07:27,863 | INFO     | mean y: 2972773.357699805
[2025-11-30 18:08:27] 2025-11-30 23:07:27,863 | INFO     | intersect: -4551683688.6483755
[2025-11-30 18:08:27] 2025-11-30 23:07:27,874 | INFO     | chi2: 8.524400577731326
[2025-11-30 18:08:27] 2025-11-30 23:07:27,882 | INFO     | current chi2=8.524400577731326 (change=18.068660439951227 %)
[2025-11-30 18:08:27] 2025-11-30 23:07:27,882 | INFO     | left removable region: 10
[2025-11-30 18:08:27] 2025-11-30 23:07:27,884 | INFO     | sum of square deviations: 2617078012489.617
[2025-11-30 18:08:27] 2025-11-30 23:07:28,099 | INFO     | sum of deviations: 8033872627384.531
[2025-11-30 18:08:27] 2025-11-30 23:07:28,100 | INFO     | mean x: 1764481181.9592338
[2025-11-30 18:08:27] 2025-11-30 23:07:28,100 | INFO     | mean y: 2983992.235265226
[2025-11-30 18:08:27] 2025-11-30 23:07:28,100 | INFO     | intersect: -5413597783.9389105
[2025-11-30 18:08:27] 2025-11-30 23:07:28,102 | INFO     | chi2: 3.2687819660673867
[2025-11-30 18:08:27] 2025-11-30 23:07:28,103 | INFO     | current memory leak: 3.07 B/s (using 2036 data points, chi2=3.27)
[2025-11-30 18:08:27] 2025-11-30 23:07:28,109 | INFO     | could have reported an average CPU frequency of 2727 MHz (72 samples)
[2025-11-30 18:08:27] 2025-11-30 23:07:28,109 | INFO     | ..............................
[2025-11-30 18:08:27] 2025-11-30 23:07:28,109 | INFO     | . Timing measurements:
[2025-11-30 18:08:27] 2025-11-30 23:07:28,109 | INFO     | . get job = 0 s
[2025-11-30 18:08:27] 2025-11-30 23:07:28,109 | INFO     | . initial setup = 2 s
[2025-11-30 18:08:27] 2025-11-30 23:07:28,109 | INFO     | . payload setup = 6 s
[2025-11-30 18:08:27] 2025-11-30 23:07:28,109 | INFO     | . stage-in = 0 s
[2025-11-30 18:08:27] 2025-11-30 23:07:28,109 | INFO     | . payload execution = 125476 s
[2025-11-30 18:08:27] 2025-11-30 23:07:28,110 | INFO     | . stage-out = 14 s
[2025-11-30 18:08:27] 2025-11-30 23:07:28,110 | INFO     | . log creation = 5 s
[2025-11-30 18:08:27] 2025-11-30 23:07:28,110 | INFO     | ..............................
[2025-11-30 18:08:27] 2025-11-30 23:07:28,344 | INFO     | time since job start (125574s) is within the limit (172800.0s)
[2025-11-30 18:08:27] 2025-11-30 23:07:28,532 | INFO     | 
[2025-11-30 18:08:27] 2025-11-30 23:07:28,532 | INFO     | job summary report
[2025-11-30 18:08:27] 2025-11-30 23:07:28,532 | INFO     | --------------------------------------------------
[2025-11-30 18:08:27] 2025-11-30 23:07:28,532 | INFO     | PanDA job id: 6893855466
[2025-11-30 18:08:27] 2025-11-30 23:07:28,532 | INFO     | task id: 47523449
[2025-11-30 18:08:27] 2025-11-30 23:07:28,532 | INFO     | errors: (none)
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | pilot state: finished 
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | transexitcode: 0
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | exeerrorcode: 0
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | exeerrordiag: 
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | exitcode: 0
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | exitmsg: OK
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | cpuconsumptiontime: 251924 s
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | nevents: 1000
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | neventsw: 0
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | pid: 3515463
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | pgrp: 3515463
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | corecount: 8
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | event service: False
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | sizes: {0: 2284315, 5: 2284577, 11: 2284633, 125487: 2366469, 125488: 2366468, 125503: 2375518, 125506: 2375702, 125558: 2375948}
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | --------------------------------------------------
[2025-11-30 18:08:27] 2025-11-30 23:07:28,533 | INFO     | 
[2025-11-30 18:08:27] 2025-11-30 23:07:28,534 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 18:08:27] 2025-11-30 23:07:28,620 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,621 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,621 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,621 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,621 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,621 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,622 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,622 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,623 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 18:08:27] 2025-11-30 23:07:28,624 | INFO     | job 6893855466 has completed (purged errors)
[2025-11-30 18:08:27] 2025-11-30 23:07:28,624 | INFO     | overall cleanup function is called
[2025-11-30 18:08:27] 2025-11-30 23:07:29,659 | INFO     | --- collectZombieJob: --- 10, [3515463]
[2025-11-30 18:08:27] 2025-11-30 23:07:29,659 | INFO     | zombie collector waiting for pid 3515463
[2025-11-30 18:08:27] 2025-11-30 23:07:29,659 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 18:08:27] 2025-11-30 23:07:29,660 | INFO     | collected zombie processes
[2025-11-30 18:08:27] 2025-11-30 23:07:29,660 | INFO     | will attempt to kill all subprocesses of pid=3515463
[2025-11-30 18:08:27] 2025-11-30 23:07:30,131 | INFO     | process IDs to be killed: [3515463] (in reverse order)
[2025-11-30 18:08:27] 2025-11-30 23:07:30,274 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 18:08:27] 2025-11-30 23:07:30,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 18:08:27] 2025-11-30 23:07:30,289 | INFO     | did not find any defunct processes belonging to 3515463
[2025-11-30 18:08:27] 2025-11-30 23:07:30,305 | INFO     | did not find any defunct processes belonging to 3515463
[2025-11-30 18:08:27] 2025-11-30 23:07:30,307 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 18:08:27] 2025-11-30 23:07:30,307 | INFO     | ready for new job
[2025-11-30 18:08:27] 2025-11-30 23:07:30,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 18:08:27] 2025-11-30 23:07:30,315 | INFO     | ***************************************
[2025-11-30 18:08:27] 2025-11-30 23:07:30,315 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 18:08:27] 2025-11-30 23:07:30,316 | INFO     | ***************************************
[2025-11-30 18:08:27] 2025-11-30 23:07:30,316 | INFO     | 
[2025-11-30 18:08:27] 2025-11-30 23:07:30,318 | INFO     | architecture information:
[2025-11-30 18:08:27] 2025-11-30 23:07:30,319 | INFO     | executing command: cat /etc/os-release
[2025-11-30 18:08:27] 2025-11-30 23:07:30,368 | INFO     | cat /etc/os-release:
[2025-11-30 18:08:27] NAME="CentOS Linux"
[2025-11-30 18:08:27] VERSION="7 (Core)"
[2025-11-30 18:08:27] ID="centos"
[2025-11-30 18:08:27] ID_LIKE="rhel fedora"
[2025-11-30 18:08:27] VERSION_ID="7"
[2025-11-30 18:08:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 18:08:27] ANSI_COLOR="0;31"
[2025-11-30 18:08:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 18:08:27] HOME_URL="https://www.centos.org/"
[2025-11-30 18:08:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 18:08:27] 
[2025-11-30 18:08:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 18:08:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 18:08:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 18:08:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 18:08:27] 
[2025-11-30 18:08:27] 2025-11-30 23:07:30,369 | INFO     | ***************************************
[2025-11-30 18:08:27] 2025-11-30 23:07:30,872 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 18:08:27] 2025-11-30 23:07:31,016 | INFO     | sufficient remaining disk space (69958893568 B)
[2025-11-30 18:08:27] 2025-11-30 23:07:31,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 18:08:27] 2025-11-30 23:07:31,017 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 18:08:27] 2025-11-30 23:07:31,017 | INFO     | update_server=False
[2025-11-30 18:08:27] 2025-11-30 23:07:31,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 18:08:27] 2025-11-30 23:07:31,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 18:08:27] 2025-11-30 23:07:31,017 | INFO     | aborting loop
[2025-11-30 18:08:27] 2025-11-30 23:07:31,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 18:08:27] 2025-11-30 23:07:31,503 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 18:08:27] 2025-11-30 23:07:31,523 | INFO     | all data control threads have been joined
[2025-11-30 18:08:27] 2025-11-30 23:07:31,727 | INFO     | all payload control threads have been joined
[2025-11-30 18:08:27] 2025-11-30 23:07:32,023 | INFO     | [job] retrieve thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:32,024 | INFO     | [job] job monitor thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:32,053 | INFO     | [job] validate thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:32,344 | INFO     | all job control threads have been joined
[2025-11-30 18:08:27] 2025-11-30 23:07:32,531 | INFO     | [data] control thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:32,671 | INFO     | [payload] failed_post thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:32,687 | INFO     | [payload] validate_post thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:32,735 | INFO     | [payload] control thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:32,771 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:32,928 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:32,970 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:33,311 | INFO     | [data] copytool_out thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:33,350 | INFO     | [job] control thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:33,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 18:08:27] 2025-11-30 23:07:33,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:33,521 | INFO     | [data] copytool_in thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:34,379 | INFO     | [job] queue monitor thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:07:35,519 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 18:08:27] 2025-11-30 23:08:04,876 | INFO     | PID=3503029 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 18:08:27] 2025-11-30 23:08:04,876 | INFO     | .. there are 11 such processes running
[2025-11-30 18:08:27] 2025-11-30 23:08:04,876 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 18:08:27] 2025-11-30 23:08:04,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 18:08:27] 2025-11-30 23:08:04,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 18:08:27] 2025-11-30 23:08:18,249 | INFO     | [monitor] cgroup control has ended
[2025-11-30 18:08:27] 2025-11-30 23:08:19,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139932845807424)>', '<ExcThread(monitor, started 139932341348096)>']
[2025-11-30 18:08:27] 2025-11-30 23:08:20,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 18:08:27] 2025-11-30 23:08:20,025 | INFO     | [monitor] control thread has ended
[2025-11-30 18:08:27] 2025-11-30 23:08:24,163 | INFO     | all workflow threads have been joined
[2025-11-30 18:08:27] 2025-11-30 23:08:24,163 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 18:08:27] 2025-11-30 23:08:24,164 | INFO     | traces error code: 0
[2025-11-30 18:08:27] 2025-11-30 23:08:24,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 18:08:27] 2025-11-30 23:08:25,552 [wrapper] ==== pilot stdout END ====
[2025-11-30 18:08:27] 2025-11-30 23:08:25,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 18:08:27] 2025-11-30 23:08:25,591 [wrapper] pilotpid: 3503029
[2025-11-30 18:08:27] 2025-11-30 23:08:25,636 [wrapper] Pilot exit status: 0
[2025-11-30 18:08:27] 2025-11-30 23:08:25,761 [wrapper] pandaids: 6893855466
[2025-11-30 18:08:27] 2025-11-30 23:08:26,424 [wrapper] cleanup supervisor_pilot 2500312 3503031
[2025-11-30 18:08:27] 2025-11-30 23:08:26,444 [wrapper] Test setup, not cleaning
[2025-11-30 18:08:27] 2025-11-30 23:08:26,482 [wrapper] apfmon messages muted
[2025-11-30 18:08:27] 2025-11-30 23:08:26,520 [wrapper] ==== wrapper stdout END ====
[2025-11-30 18:08:27] 2025-11-30 23:08:26,562 [wrapper] ==== wrapper stderr END ====
[2025-11-30 18:08:27]  *** Error codes and diagnostics ***
[2025-11-30 18:08:27]     "exeErrorCode": 0,
[2025-11-30 18:08:27]     "exeErrorDiag": "",
[2025-11-30 18:08:27]     "pilotErrorCode": 0,
[2025-11-30 18:08:27]     "pilotErrorDiag": "",
[2025-11-30 18:08:27]  *** Listing of results directory ***
[2025-11-30 18:08:27] total 1332980
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 07:07 pilot3.tar.gz
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 07:29 queuedata.json
[2025-11-30 18:08:27] -rwx------. 1 boincer umatlas     36292 Nov 20 07:33 runpilot2-wrapper.sh
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas       100 Nov 29 07:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 18:08:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 29 07:14 run_atlas
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas       105 Nov 29 07:14 job.xml
[2025-11-30 18:08:27] -rw-r--r--. 2 boincer umatlas 407687742 Nov 29 07:14 EVNT.47493127._000445.pool.root.1
[2025-11-30 18:08:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 07:14 start_atlas.sh
[2025-11-30 18:08:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 29 07:14 shared
[2025-11-30 18:08:27] -rw-r--r--. 2 boincer umatlas    590105 Nov 29 07:14 input.tar.gz
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas         0 Nov 29 07:14 boinc_lockfile
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas      2786 Nov 29 07:14 pandaJob.out
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas        57 Nov 29 07:14 setup.sh.local
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas    991834 Nov 29 07:14 agis_schedconf.cvmfs.json
[2025-11-30 18:08:27] drwx------. 5 boincer umatlas      4096 Nov 29 07:14 pilot3
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas       534 Nov 30 17:36 boinc_task_state.xml
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas      6845 Nov 30 18:02 init_data.xml
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas 915058758 Nov 30 18:04 HITS.47523449._004447.pool.root.1
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas      1061 Nov 30 18:06 memory_monitor_summary.json
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas   1516240 Nov 30 18:06 agis_ddmendpoints.agis.ALL.json
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas   2912797 Nov 30 18:06 log.47523449._004447.job.log.tgz.1
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas        95 Nov 30 18:07 pilot_heartbeat.json
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas      7944 Nov 30 18:07 heartbeat.json
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas        30 Nov 30 18:08 wrapper_checkpoint.txt
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas      4824 Nov 30 18:08 pilotlog.txt
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas  16240624 Nov 30 18:08 log.47523449._004447.job.log.1
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas       353 Nov 30 18:08 output.list
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas       620 Nov 30 18:08 runtime_log
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas  19169280 Nov 30 18:08 result.tar.gz
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas      9354 Nov 30 18:08 runtime_log.err
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas       665 Nov 30 18:08 9maKDmU2Ig8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgoHKDmFIpYMo.diag
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 30 18:08 boinc_mmap_file
[2025-11-30 18:08:27] -rw-r--r--. 1 boincer umatlas     21503 Nov 30 18:08 stderr.txt
[2025-11-30 18:08:27] HITS file was successfully produced:
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas 915058758 Nov 30 18:04 shared/HITS.pool.root.1
[2025-11-30 18:08:27]  *** Contents of shared directory: ***
[2025-11-30 18:08:27] total 1311076
[2025-11-30 18:08:27] -rw-r--r--. 2 boincer umatlas 407687742 Nov 29 07:14 ATLAS.root_0
[2025-11-30 18:08:27] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 07:14 start_atlas.sh
[2025-11-30 18:08:27] -rw-r--r--. 2 boincer umatlas    590105 Nov 29 07:14 input.tar.gz
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas 915058758 Nov 30 18:04 HITS.pool.root.1
[2025-11-30 18:08:27] -rw-------. 1 boincer umatlas  19169280 Nov 30 18:08 result.tar.gz
18:08:49 (3498371): run_atlas exited; CPU time 253730.551910
18:08:49 (3498371): called boinc_finish(0)

</stderr_txt>
]]>

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