Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:26 (165215): wrapper (7.7.26015): starting
00:11:26 (165215): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 00:11:26] Arguments: --nthreads 12
[2025-11-29 00:11:26] Threads: 12
[2025-11-29 00:11:26] Checking for CVMFS
[2025-11-29 00:11:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 00:11:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 00:11:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 00:11:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 00:11:30] 2.13.2.0 6051 38290 280060 153430 1 345 31444773 40960001 14051 16776704 0 45938919 99.791 21820383 37072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 00:11:30] CVMFS is ok
[2025-11-29 00:11:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 00:11:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 00:11:30] Further information can be found at the LHC@home message board.
[2025-11-29 00:11:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 00:11:30] Checking for apptainer binary...
[2025-11-29 00:11:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 00:11:30] Running /usr/bin/apptainer --version
[2025-11-29 00:11:30] apptainer version 1.4.4-1.el9
[2025-11-29 00:11:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 00:11:32] c-210-37-3.aglt2.org
[2025-11-29 00:11:32] apptainer works
[2025-11-29 00:11:32] Set ATHENA_PROC_NUMBER=12
[2025-11-29 00:11:32] Set ATHENA_CORE_NUMBER=12
[2025-11-29 00:11:32] Starting ATLAS job with PandaID=6893858230
[2025-11-29 00:11:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 20:57:45]  *** The last 200 lines of the pilot log: ***
[2025-11-29 20:57:45] 2025-11-30 00:06:28,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 20:57:45] 2025-11-30 00:06:30,132 | INFO     | time since job start (68019s) is within the limit (172800.0s)
[2025-11-29 20:57:45] 2025-11-30 00:06:30,798 | INFO     | monitor loop #4291: job 0:6893858230 is in state 'finished'
[2025-11-29 20:57:45] 2025-11-30 00:06:30,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 20:57:45] 2025-11-30 00:06:32,151 | INFO     | time since job start (68021s) is within the limit (172800.0s)
[2025-11-29 20:57:45] 2025-11-30 00:06:33,303 | INFO     | monitor loop #4292: job 0:6893858230 is in state 'finished'
[2025-11-29 20:57:45] 2025-11-30 00:06:33,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 20:57:45] 2025-11-30 00:06:34,158 | INFO     | time since job start (68023s) is within the limit (172800.0s)
[2025-11-29 20:57:45] 2025-11-30 00:06:35,808 | INFO     | monitor loop #4293: job 0:6893858230 is in state 'finished'
[2025-11-29 20:57:45] 2025-11-30 00:06:35,808 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 20:57:45] 2025-11-30 00:06:36,165 | INFO     | time since job start (68025s) is within the limit (172800.0s)
[2025-11-29 20:57:45] 2025-11-30 00:06:38,172 | INFO     | time since job start (68027s) is within the limit (172800.0s)
[2025-11-29 20:57:45] 2025-11-30 00:06:38,313 | INFO     | monitor loop #4294: job 0:6893858230 is in state 'finished'
[2025-11-29 20:57:45] 2025-11-30 00:06:38,313 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 20:57:45] 2025-11-30 00:06:40,179 | INFO     | time since job start (68029s) is within the limit (172800.0s)
[2025-11-29 20:57:45] 2025-11-30 00:06:40,700 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-29 20:57:45] 2025-11-30 00:06:40,704 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2529.1133928571435
[2025-11-29 20:57:45] 2025-11-30 00:06:40,717 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893858230/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 20:57:45] 2025-11-30 00:06:40,718 | INFO     | extracted standard info from prmon json
[2025-11-29 20:57:45] 2025-11-30 00:06:40,718 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 20:57:45] 2025-11-30 00:06:40,719 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 20:57:45] 2025-11-30 00:06:40,741 | INFO     | fitting pss+swap vs Time
[2025-11-29 20:57:45] 2025-11-30 00:06:40,743 | INFO     | sum of square deviations: 426683569179.5678
[2025-11-29 20:57:45] 2025-11-30 00:06:40,788 | INFO     | sum of deviations: 3935837014323.6465
[2025-11-29 20:57:45] 2025-11-30 00:06:40,789 | INFO     | mean x: 1764427262.8821943
[2025-11-29 20:57:45] 2025-11-30 00:06:40,789 | INFO     | mean y: 3432406.9973021583
[2025-11-29 20:57:45] 2025-11-30 00:06:40,789 | INFO     | intersect: -16272090326.832035
[2025-11-29 20:57:45] 2025-11-30 00:06:40,791 | INFO     | chi2: 29.595167370738768
[2025-11-29 20:57:45] 2025-11-30 00:06:40,793 | INFO     | sum of square deviations: 420959403808.11487
[2025-11-29 20:57:45] 2025-11-30 00:06:40,840 | INFO     | monitor loop #4295: job 0:6893858230 is in state 'finished'
[2025-11-29 20:57:45] 2025-11-30 00:06:40,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 20:57:45] 2025-11-30 00:06:41,025 | INFO     | sum of deviations: 4389884391584.2
[2025-11-29 20:57:45] 2025-11-30 00:06:41,026 | INFO     | mean x: 1764427110.4019873
[2025-11-29 20:57:45] 2025-11-30 00:06:41,026 | INFO     | mean y: 3444499.9096657634
[2025-11-29 20:57:45] 2025-11-30 00:06:41,026 | INFO     | intersect: -18396503243.20424
[2025-11-29 20:57:45] 2025-11-30 00:06:41,027 | INFO     | chi2: 26.134615498960155
[2025-11-29 20:57:45] 2025-11-30 00:06:41,027 | INFO     | current chi2=26.134615498960155 (change=11.692962666601161 %)
[2025-11-29 20:57:45] 2025-11-30 00:06:41,027 | INFO     | right removable region: 1106
[2025-11-29 20:57:45] 2025-11-30 00:06:41,029 | INFO     | sum of square deviations: 420948422774.66797
[2025-11-29 20:57:45] 2025-11-30 00:06:41,237 | INFO     | sum of deviations: 3395455801153.114
[2025-11-29 20:57:45] 2025-11-30 00:06:41,237 | INFO     | mean x: 1764427415.5085816
[2025-11-29 20:57:45] 2025-11-30 00:06:41,237 | INFO     | mean y: 3446785.8292682925
[2025-11-29 20:57:45] 2025-11-30 00:06:41,237 | INFO     | intersect: -14228784479.494148
[2025-11-29 20:57:45] 2025-11-30 00:06:41,239 | INFO     | chi2: 25.223778187869975
[2025-11-29 20:57:45] 2025-11-30 00:06:41,239 | INFO     | current chi2=25.223778187869975 (change=14.77061821650942 %)
[2025-11-29 20:57:45] 2025-11-30 00:06:41,239 | INFO     | left removable region: 10
[2025-11-29 20:57:45] 2025-11-30 00:06:41,240 | INFO     | sum of square deviations: 408525212299.0915
[2025-11-29 20:57:45] 2025-11-30 00:06:41,260 | INFO     | sum of deviations: 3465150559900.7837
[2025-11-29 20:57:45] 2025-11-30 00:06:41,260 | INFO     | mean x: 1764427385.1624088
[2025-11-29 20:57:45] 2025-11-30 00:06:41,260 | INFO     | mean y: 3474752.0967153283
[2025-11-29 20:57:45] 2025-11-30 00:06:41,260 | INFO     | intersect: -14962569833.47853
[2025-11-29 20:57:45] 2025-11-30 00:06:41,261 | INFO     | chi2: 17.58279180737031
[2025-11-29 20:57:45] 2025-11-30 00:06:41,262 | INFO     | current memory leak: 8.48 B/s (using 1096 data points, chi2=17.58)
[2025-11-29 20:57:45] 2025-11-30 00:06:41,263 | INFO     | could have reported an average CPU frequency of 2736 MHz (40 samples)
[2025-11-29 20:57:45] 2025-11-30 00:06:41,263 | INFO     | ..............................
[2025-11-29 20:57:45] 2025-11-30 00:06:41,263 | INFO     | . Timing measurements:
[2025-11-29 20:57:45] 2025-11-30 00:06:41,263 | INFO     | . get job = 0 s
[2025-11-29 20:57:45] 2025-11-30 00:06:41,263 | INFO     | . initial setup = 5 s
[2025-11-29 20:57:45] 2025-11-30 00:06:41,263 | INFO     | . payload setup = 51 s
[2025-11-29 20:57:45] 2025-11-30 00:06:41,263 | INFO     | . stage-in = 0 s
[2025-11-29 20:57:45] 2025-11-30 00:06:41,264 | INFO     | . payload execution = 67849 s
[2025-11-29 20:57:45] 2025-11-30 00:06:41,264 | INFO     | . stage-out = 8 s
[2025-11-29 20:57:45] 2025-11-30 00:06:41,264 | INFO     | . log creation = 1 s
[2025-11-29 20:57:45] 2025-11-30 00:06:41,264 | INFO     | ..............................
[2025-11-29 20:57:45] 2025-11-30 00:06:41,868 | INFO     | 
[2025-11-29 20:57:45] 2025-11-30 00:06:41,868 | INFO     | job summary report
[2025-11-29 20:57:45] 2025-11-30 00:06:41,868 | INFO     | --------------------------------------------------
[2025-11-29 20:57:45] 2025-11-30 00:06:41,868 | INFO     | PanDA job id: 6893858230
[2025-11-29 20:57:45] 2025-11-30 00:06:41,868 | INFO     | task id: 47523449
[2025-11-29 20:57:45] 2025-11-30 00:06:41,868 | INFO     | errors: (none)
[2025-11-29 20:57:45] 2025-11-30 00:06:41,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | pilot state: finished 
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | transexitcode: 0
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | exeerrorcode: 0
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | exeerrordiag: 
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | exitcode: 0
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | exitmsg: OK
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | cpuconsumptiontime: 242069 s
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | nevents: 1000
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | neventsw: 0
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | pid: 177216
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | pgrp: 177216
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | corecount: 12
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | event service: False
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | sizes: {0: 2284088, 1: 2284144, 2: 2284172, 3: 2284399, 15: 2284399, 26: 2284427, 37: 2284583, 43: 2284873, 48: 2284901, 67905: 2341550, 67906: 2341549, 67916: 235
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | --------------------------------------------------
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | 
[2025-11-29 20:57:45] 2025-11-30 00:06:41,869 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-29 20:57:45] 2025-11-30 00:06:41,961 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,961 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,961 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,961 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,961 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,962 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 20:57:45] 2025-11-30 00:06:41,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,963 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 20:57:45] 2025-11-30 00:06:41,963 | INFO     | job 6893858230 has completed (purged errors)
[2025-11-29 20:57:45] 2025-11-30 00:06:41,963 | INFO     | overall cleanup function is called
[2025-11-29 20:57:45] 2025-11-30 00:06:42,981 | INFO     | --- collectZombieJob: --- 10, [177216]
[2025-11-29 20:57:45] 2025-11-30 00:06:42,981 | INFO     | zombie collector waiting for pid 177216
[2025-11-29 20:57:45] 2025-11-30 00:06:42,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 20:57:45] 2025-11-30 00:06:42,981 | INFO     | collected zombie processes
[2025-11-29 20:57:45] 2025-11-30 00:06:42,982 | INFO     | will attempt to kill all subprocesses of pid=177216
[2025-11-29 20:57:45] 2025-11-30 00:06:44,186 | INFO     | process IDs to be killed: [177216] (in reverse order)
[2025-11-29 20:57:45] 2025-11-30 00:06:44,272 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 20:57:45] 2025-11-30 00:06:44,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 20:57:45] 2025-11-30 00:06:44,301 | INFO     | did not find any defunct processes belonging to 177216
[2025-11-29 20:57:45] 2025-11-30 00:06:44,327 | INFO     | did not find any defunct processes belonging to 177216
[2025-11-29 20:57:45] 2025-11-30 00:06:44,328 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 20:57:45] 2025-11-30 00:06:44,329 | INFO     | ready for new job
[2025-11-29 20:57:45] 2025-11-30 00:06:44,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 20:57:45] 2025-11-30 00:06:44,334 | INFO     | ***************************************
[2025-11-29 20:57:45] 2025-11-30 00:06:44,334 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 20:57:45] 2025-11-30 00:06:44,334 | INFO     | ***************************************
[2025-11-29 20:57:45] 2025-11-30 00:06:44,334 | INFO     | 
[2025-11-29 20:57:45] 2025-11-30 00:06:44,337 | INFO     | architecture information:
[2025-11-29 20:57:45] 2025-11-30 00:06:44,337 | INFO     | executing command: cat /etc/os-release
[2025-11-29 20:57:45] 2025-11-30 00:06:44,386 | INFO     | cat /etc/os-release:
[2025-11-29 20:57:45] NAME="CentOS Linux"
[2025-11-29 20:57:45] VERSION="7 (Core)"
[2025-11-29 20:57:45] ID="centos"
[2025-11-29 20:57:45] ID_LIKE="rhel fedora"
[2025-11-29 20:57:45] VERSION_ID="7"
[2025-11-29 20:57:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 20:57:45] ANSI_COLOR="0;31"
[2025-11-29 20:57:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 20:57:45] HOME_URL="https://www.centos.org/"
[2025-11-29 20:57:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 20:57:45] 
[2025-11-29 20:57:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 20:57:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 20:57:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 20:57:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 20:57:45] 
[2025-11-29 20:57:45] 2025-11-30 00:06:44,387 | INFO     | ***************************************
[2025-11-29 20:57:45] 2025-11-30 00:06:44,890 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-29 20:57:45] 2025-11-30 00:06:45,050 | INFO     | sufficient remaining disk space (70744276992 B)
[2025-11-29 20:57:45] 2025-11-30 00:06:45,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 20:57:45] 2025-11-30 00:06:45,051 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 20:57:45] 2025-11-30 00:06:45,051 | INFO     | update_server=False
[2025-11-29 20:57:45] 2025-11-30 00:06:45,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 20:57:45] 2025-11-30 00:06:45,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 20:57:45] 2025-11-30 00:06:45,061 | INFO     | aborting loop
[2025-11-29 20:57:45] 2025-11-30 00:06:45,197 | INFO     | all data control threads have been joined
[2025-11-29 20:57:45] 2025-11-30 00:06:45,889 | INFO     | all payload control threads have been joined
[2025-11-29 20:57:45] 2025-11-30 00:06:46,057 | INFO     | [job] retrieve thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:46,067 | INFO     | [job] job monitor thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:46,091 | INFO     | all job control threads have been joined
[2025-11-29 20:57:45] 2025-11-30 00:06:46,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:46,203 | INFO     | [data] control thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:46,276 | INFO     | [job] validate thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:46,283 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:46,546 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 20:57:45] 2025-11-30 00:06:46,567 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 20:57:45] 2025-11-30 00:06:46,799 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:46,803 | INFO     | [data] copytool_in thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:46,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 20:57:45] 2025-11-30 00:06:46,905 | INFO     | [payload] control thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:46,990 | INFO     | [payload] failed_post thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:47,099 | INFO     | [job] control thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:47,297 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:47,300 | INFO     | [payload] validate_post thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:47,572 | INFO     | [job] queue monitor thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:48,578 | INFO     | [data] copytool_out thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:50,845 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 20:57:45] 2025-11-30 00:06:52,075 | INFO     | [monitor] cgroup control has ended
[2025-11-29 20:57:45] 2025-11-30 00:06:53,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585735571264)>', '<ExcThread(monitor, started 140584933119744)>']
[2025-11-29 20:57:45] 2025-11-30 00:06:58,257 | INFO     | all workflow threads have been joined
[2025-11-29 20:57:45] 2025-11-30 00:06:58,257 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 20:57:45] 2025-11-30 00:06:58,258 | INFO     | traces error code: 0
[2025-11-29 20:57:45] 2025-11-30 00:06:58,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 20:57:45] 2025-11-30 00:07:15,566 | INFO     | PID=169031 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-29 20:57:45] 2025-11-30 00:07:15,567 | INFO     | .. there are 11 such processes running
[2025-11-29 20:57:45] 2025-11-30 00:07:15,568 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 20:57:45] 2025-11-30 00:07:15,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 20:57:45] 2025-11-30 00:07:15,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 20:57:45] 2025-11-30 00:07:15,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 20:57:45] 2025-11-30 00:07:15,568 | INFO     | [monitor] control thread has ended
[2025-11-29 20:57:45] 2025-11-30 00:07:16,162 [wrapper] ==== pilot stdout END ====
[2025-11-29 20:57:45] 2025-11-30 00:07:16,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 20:57:45] 2025-11-30 00:07:16,195 [wrapper] pilotpid: 169031
[2025-11-29 20:57:45] 2025-11-30 00:07:16,227 [wrapper] Pilot exit status: 0
[2025-11-29 20:57:45] 2025-11-30 00:07:16,382 [wrapper] pandaids: 6893858230
[2025-11-29 20:57:45] 2025-11-30 00:07:16,499 [wrapper] cleanup supervisor_pilot 1841223 169032
[2025-11-29 20:57:45] 2025-11-30 00:07:16,598 [wrapper] Test setup, not cleaning
[2025-11-29 20:57:45] 2025-11-30 00:07:16,626 [wrapper] apfmon messages muted
[2025-11-29 20:57:45] 2025-11-30 00:07:16,652 [wrapper] ==== wrapper stdout END ====
[2025-11-29 20:57:45] 2025-11-30 00:07:16,682 [wrapper] ==== wrapper stderr END ====
[2025-11-29 20:57:45]  *** Error codes and diagnostics ***
[2025-11-29 20:57:45]     "exeErrorCode": 0,
[2025-11-29 20:57:45]     "exeErrorDiag": "",
[2025-11-29 20:57:45]     "pilotErrorCode": 0,
[2025-11-29 20:57:45]     "pilotErrorDiag": "",
[2025-11-29 20:57:45]  *** Listing of results directory ***
[2025-11-29 20:57:45] total 1331364
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 08:16 queuedata.json
[2025-11-29 20:57:45] -rwx------. 1 boincer umatlas     36292 Nov 20 08:17 runpilot2-wrapper.sh
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas       100 Nov 29 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 20:57:45] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 29 00:11 run_atlas
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas       105 Nov 29 00:11 job.xml
[2025-11-29 20:57:45] -rw-r--r--. 2 boincer umatlas 410567678 Nov 29 00:11 EVNT.47493127._000505.pool.root.1
[2025-11-29 20:57:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 00:11 start_atlas.sh
[2025-11-29 20:57:45] drwxrwx--x. 2 boincer umatlas      4096 Nov 29 00:11 shared
[2025-11-29 20:57:45] -rw-r--r--. 2 boincer umatlas    590103 Nov 29 00:11 input.tar.gz
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas         0 Nov 29 00:11 boinc_lockfile
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas      2786 Nov 29 00:11 pandaJob.out
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas        57 Nov 29 00:11 setup.sh.local
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas    991834 Nov 29 00:12 agis_schedconf.cvmfs.json
[2025-11-29 20:57:45] drwx------. 5 boincer umatlas      4096 Nov 29 00:12 pilot3
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas       533 Nov 29 18:20 boinc_task_state.xml
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas 925663400 Nov 29 19:05 HITS.47523449._005049.pool.root.1
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas      1059 Nov 29 19:06 memory_monitor_summary.json
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas   1516240 Nov 29 19:06 agis_ddmendpoints.agis.ALL.json
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas   2691186 Nov 29 19:06 log.47523449._005049.job.log.tgz.1
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas      8643 Nov 29 19:06 heartbeat.json
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas        95 Nov 29 19:07 pilot_heartbeat.json
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas       822 Nov 29 19:07 pilotlog.txt
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas   8885803 Nov 29 19:07 log.47523449._005049.job.log.1
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas       353 Nov 29 19:07 output.list
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas       620 Nov 29 19:07 runtime_log
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas  11601920 Nov 29 19:07 result.tar.gz
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas      9355 Nov 29 19:07 runtime_log.err
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas       662 Nov 29 19:07 GFXKDmKiJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEuHKDmzr3XDm.diag
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas      6845 Nov 29 20:57 init_data.xml
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas        29 Nov 29 20:57 wrapper_checkpoint.txt
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas      8192 Nov 29 20:57 boinc_mmap_file
[2025-11-29 20:57:45] -rw-r--r--. 1 boincer umatlas     21835 Nov 29 20:57 stderr.txt
[2025-11-29 20:57:45] HITS file was successfully produced:
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas 925663400 Nov 29 19:05 shared/HITS.pool.root.1
[2025-11-29 20:57:45]  *** Contents of shared directory: ***
[2025-11-29 20:57:45] total 1316856
[2025-11-29 20:57:45] -rw-r--r--. 2 boincer umatlas 410567678 Nov 29 00:11 ATLAS.root_0
[2025-11-29 20:57:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 00:11 start_atlas.sh
[2025-11-29 20:57:45] -rw-r--r--. 2 boincer umatlas    590103 Nov 29 00:11 input.tar.gz
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas 925663400 Nov 29 19:05 HITS.pool.root.1
[2025-11-29 20:57:45] -rw-------. 1 boincer umatlas  11601920 Nov 29 19:07 result.tar.gz
20:57:47 (165215): run_atlas exited; CPU time 242603.814019
20:57:47 (165215): called boinc_finish(0)

</stderr_txt>
]]>

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