Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:19:40 (3815917): wrapper (7.7.26015): starting
06:19:40 (3815917): wrapper: running run_atlas (--nthreads 3)
[2025-11-29 06:19:40] Arguments: --nthreads 3
[2025-11-29 06:19:40] Threads: 3
[2025-11-29 06:19:40] Checking for CVMFS
[2025-11-29 06:19:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 06:19:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 06:19:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 06:19:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 06:19:40] 2.9.2.0 2899196 203 63600 153432 0 16 36565543 36864001 0 130560 0 2754873 99.999 10541 21209 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-29 06:19:40] CVMFS is ok
[2025-11-29 06:19:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 06:19:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 06:19:40] Further information can be found at the LHC@home message board.
[2025-11-29 06:19:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 06:19:40] Checking for apptainer binary...
[2025-11-29 06:19:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 06:19:40] Running /usr/bin/apptainer --version
[2025-11-29 06:19:40] apptainer version 1.4.1-1.1
[2025-11-29 06:19:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 06:19:41] thA335
[2025-11-29 06:19:41] apptainer works
[2025-11-29 06:19:41] Set ATHENA_PROC_NUMBER=3
[2025-11-29 06:19:41] Set ATHENA_CORE_NUMBER=3
[2025-11-29 06:19:41] Starting ATLAS job with PandaID=6898987835
[2025-11-29 06:19:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 06:24:00]  *** The last 200 lines of the pilot log: ***
[2025-11-29 06:24:00] 2025-11-29 05:23:07,869 | INFO     | ***************************************
[2025-11-29 06:24:00] 2025-11-29 05:23:08,372 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-29 06:24:00] 2025-11-29 05:23:08,386 | INFO     | sufficient remaining disk space (825415958528 B)
[2025-11-29 06:24:00] 2025-11-29 05:23:08,386 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 06:24:00] 2025-11-29 05:23:08,386 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 06:24:00] 2025-11-29 05:23:08,386 | INFO     | update_server=False
[2025-11-29 06:24:00] 2025-11-29 05:23:08,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 06:24:00] 2025-11-29 05:23:08,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 06:24:00] 2025-11-29 05:23:08,387 | INFO     | aborting loop
[2025-11-29 06:24:00] 2025-11-29 05:23:08,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 06:24:00] 2025-11-29 05:23:09,159 | INFO     | all data control threads have been joined
[2025-11-29 06:24:00] 2025-11-29 05:23:09,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 06:24:00] 2025-11-29 05:23:09,392 | INFO     | [job] job monitor thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:09,393 | INFO     | [job] retrieve thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:09,394 | INFO     | [job] queue monitor thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:09,461 | INFO     | all payload control threads have been joined
[2025-11-29 06:24:00] 2025-11-29 05:23:09,585 | INFO     | [payload] failed_post thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:10,041 | INFO     | all job control threads have been joined
[2025-11-29 06:24:00] 2025-11-29 05:23:10,108 | INFO     | [payload] validate_post thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:10,165 | INFO     | [data] control thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:10,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:10,462 | INFO     | [job] validate thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:10,467 | INFO     | [payload] control thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:10,542 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:10,599 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:10,712 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:10,856 | INFO     | [data] copytool_in thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:11,047 | INFO     | [job] control thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:11,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 06:24:00] 2025-11-29 05:23:11,292 | INFO     | [data] copytool_out thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:15,272 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 06:24:00] 2025-11-29 05:23:38,641 | INFO     | PID=3819660 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 06:24:00] 2025-11-29 05:23:38,641 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 06:24:00] 2025-11-29 05:23:38,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 06:24:00] 2025-11-29 05:23:38,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 06:24:00] 2025-11-29 05:23:53,763 | INFO     | [monitor] cgroup control has ended
[2025-11-29 06:24:00] 2025-11-29 05:23:55,056 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451140892480)>', '<ExcThread(monitor, started 140450514065152)>']
[2025-11-29 06:24:00] 2025-11-29 05:23:55,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 06:24:00] 2025-11-29 05:23:55,730 | INFO     | [monitor] control thread has ended
[2025-11-29 06:24:00] 2025-11-29 05:24:00,082 | INFO     | all workflow threads have been joined
[2025-11-29 06:24:00] 2025-11-29 05:24:00,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 06:24:00] 2025-11-29 05:24:00,083 | INFO     | traces error code: 0
[2025-11-29 06:24:00] 2025-11-29 05:24:00,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 06:24:00] 2025-11-29 05:24:00,130 [wrapper] ==== pilot stdout END ====
[2025-11-29 06:24:00] 2025-11-29 05:24:00,133 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 06:24:00] 2025-11-29 05:24:00,136 [wrapper] pilotpid: 3819660
[2025-11-29 06:24:00] 2025-11-29 05:24:00,139 [wrapper] Pilot exit status: 0
[2025-11-29 06:24:00] 2025-11-29 05:24:00,146 [wrapper] pandaids: 6898987835
[2025-11-29 06:24:00] 2025-11-29 05:24:00,163 [wrapper] cleanup supervisor_pilot 3819666 3819661
[2025-11-29 06:24:00] 2025-11-29 05:24:00,165 [wrapper] Test setup, not cleaning
[2025-11-29 06:24:00] 2025-11-29 05:24:00,168 [wrapper] apfmon messages muted
[2025-11-29 06:24:00] 2025-11-29 05:24:00,170 [wrapper] ==== wrapper stdout END ====
[2025-11-29 06:24:00] 2025-11-29 05:24:00,173 [wrapper] ==== wrapper stderr END ====
[2025-11-29 06:24:00]  *** Error codes and diagnostics ***
[2025-11-29 06:24:00]     "exeErrorCode": 65,
[2025-11-29 06:24:00]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-29 06:24:00]     "pilotErrorCode": 1305,
[2025-11-29 06:24:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-29 06:24:00]  *** Listing of results directory ***
[2025-11-29 06:24:00] total 403772
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc    576529 Nov 27 01:01 pilot3.tar.gz
[2025-11-29 06:24:00] -rwx------ 1 boinc boinc     36292 Nov 27 01:28 runpilot2-wrapper.sh
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc      5112 Nov 27 01:28 queuedata.json
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc       100 Nov 29 06:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 06:24:00] -rwxr-xr-x 1 boinc boinc      7986 Nov 29 06:19 run_atlas
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc       105 Nov 29 06:19 job.xml
[2025-11-29 06:24:00] -rw-r--r-- 2 boinc boinc 409257209 Nov 29 06:19 EVNT.47483658._003241.pool.root.1
[2025-11-29 06:24:00] -rw-r--r-- 2 boinc boinc    590101 Nov 29 06:19 input.tar.gz
[2025-11-29 06:24:00] -rw-r--r-- 2 boinc boinc     15847 Nov 29 06:19 start_atlas.sh
[2025-11-29 06:24:00] drwxrwx--x 2 boinc boinc      4096 Nov 29 06:19 shared
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc         0 Nov 29 06:19 boinc_setup_complete
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc      6196 Nov 29 06:19 init_data.xml
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc         0 Nov 29 06:19 boinc_lockfile
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc      2786 Nov 29 06:19 pandaJob.out
[2025-11-29 06:24:00] -rw------- 1 boinc boinc    991826 Nov 29 06:19 agis_schedconf.cvmfs.json
[2025-11-29 06:24:00] -rw------- 1 boinc boinc   1516240 Nov 29 06:19 agis_ddmendpoints.agis.ALL.json
[2025-11-29 06:24:00] drwx------ 5 boinc boinc      4096 Nov 29 06:19 pilot3
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc       524 Nov 29 06:20 boinc_task_state.xml
[2025-11-29 06:24:00] -rw------- 1 boinc boinc       947 Nov 29 06:21 memory_monitor_summary.json
[2025-11-29 06:24:00] -rw------- 1 boinc boinc     55867 Nov 29 06:21 log.47556173._001975.job.log.tgz.1
[2025-11-29 06:24:00] -rw------- 1 boinc boinc        95 Nov 29 06:22 pilot_heartbeat.json
[2025-11-29 06:24:00] -rw------- 1 boinc boinc      8402 Nov 29 06:23 heartbeat.json
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc      8192 Nov 29 06:23 boinc_mmap_file
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc        23 Nov 29 06:23 wrapper_checkpoint.txt
[2025-11-29 06:24:00] -rw------- 1 boinc boinc      4752 Nov 29 06:24 pilotlog.txt
[2025-11-29 06:24:00] -rw------- 1 boinc boinc     93443 Nov 29 06:24 log.47556173._001975.job.log.1
[2025-11-29 06:24:00] -rw------- 1 boinc boinc       186 Nov 29 06:24 output.list
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc       620 Nov 29 06:24 runtime_log
[2025-11-29 06:24:00] -rw------- 1 boinc boinc    174080 Nov 29 06:24 result.tar.gz
[2025-11-29 06:24:00] -rw------- 1 boinc boinc       648 Nov 29 06:24 ueNKDmI3ei8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnSNKDm0nMWxm.diag
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc      8744 Nov 29 06:24 runtime_log.err
[2025-11-29 06:24:00] -rw-r--r-- 1 boinc boinc      8337 Nov 29 06:24 stderr.txt
[2025-11-29 06:24:00] No HITS result produced
[2025-11-29 06:24:00]  *** Contents of shared directory: ***
[2025-11-29 06:24:00] total 400440
[2025-11-29 06:24:00] -rw-r--r-- 2 boinc boinc 409257209 Nov 29 06:19 ATLAS.root_0
[2025-11-29 06:24:00] -rw-r--r-- 2 boinc boinc    590101 Nov 29 06:19 input.tar.gz
[2025-11-29 06:24:00] -rw-r--r-- 2 boinc boinc     15847 Nov 29 06:19 start_atlas.sh
[2025-11-29 06:24:00] -rw------- 1 boinc boinc    174080 Nov 29 06:24 result.tar.gz
06:24:02 (3815917): run_atlas exited; CPU time 31.820497
06:24:02 (3815917): called boinc_finish(0)

</stderr_txt>
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