Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:55:46 (25000): wrapper (7.7.26015): starting
23:55:46 (25000): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 23:55:46] Arguments: --nthreads 8
[2025-11-28 23:55:46] Threads: 8
[2025-11-28 23:55:46] Checking for CVMFS
[2025-11-28 23:55:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 23:55:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 23:55:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 23:55:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 23:55:46] 2.11.2.0 7040 121550 144456 153430 2 81 18085224 18432001 1885 130560 0 88297213 99.975 5014407 31354 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 23:55:46] CVMFS is ok
[2025-11-28 23:55:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 23:55:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 23:55:46] Further information can be found at the LHC@home message board.
[2025-11-28 23:55:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 23:55:46] Checking for apptainer binary...
[2025-11-28 23:55:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 23:55:46] Running /usr/bin/apptainer --version
[2025-11-28 23:55:46] apptainer version 1.3.2-1.el7
[2025-11-28 23:55:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 23:55:47] c-206-7.aglt2.org
[2025-11-28 23:55:47] apptainer works
[2025-11-28 23:55:47] Set ATHENA_PROC_NUMBER=8
[2025-11-28 23:55:47] Set ATHENA_CORE_NUMBER=8
[2025-11-28 23:55:47] Starting ATLAS job with PandaID=6898761855
[2025-11-28 23:55:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 19:35:01]  *** The last 200 lines of the pilot log: ***
[2025-11-29 19:35:01] 2025-11-30 00:34:02,653 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 19:35:01] 2025-11-30 00:34:02,653 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 19:35:01] 2025-11-30 00:34:02,669 | INFO     | fitting pss+swap vs Time
[2025-11-29 19:35:01] 2025-11-30 00:34:02,670 | INFO     | sum of square deviations: 482756685626.1462
[2025-11-29 19:35:01] 2025-11-30 00:34:02,694 | INFO     | sum of deviations: 2079584157063.9292
[2025-11-29 19:35:01] 2025-11-30 00:34:02,695 | INFO     | mean x: 1764427503.5910268
[2025-11-29 19:35:01] 2025-11-30 00:34:02,695 | INFO     | mean y: 2868911.204486626
[2025-11-29 19:35:01] 2025-11-30 00:34:02,695 | INFO     | intersect: -7597803626.342302
[2025-11-29 19:35:01] 2025-11-30 00:34:02,696 | INFO     | chi2: 6.455576531366131
[2025-11-29 19:35:01] 2025-11-30 00:34:02,697 | INFO     | sum of square deviations: 476535875581.89276
[2025-11-29 19:35:01] 2025-11-30 00:34:02,725 | INFO     | sum of deviations: 2449992323222.2646
[2025-11-29 19:35:01] 2025-11-30 00:34:02,725 | INFO     | mean x: 1764427351.0935876
[2025-11-29 19:35:01] 2025-11-30 00:34:02,726 | INFO     | mean y: 2877987.73830156
[2025-11-29 19:35:01] 2025-11-30 00:34:02,726 | INFO     | intersect: -9068492472.637049
[2025-11-29 19:35:01] 2025-11-30 00:34:02,727 | INFO     | chi2: 3.4525819265878237
[2025-11-29 19:35:01] 2025-11-30 00:34:02,728 | INFO     | current chi2=3.4525819265878237 (change=46.517837565513496 %)
[2025-11-29 19:35:01] 2025-11-30 00:34:02,729 | INFO     | sum of square deviations: 470368740962.62335
[2025-11-29 19:35:01] 2025-11-30 00:34:02,773 | INFO     | sum of deviations: 2644288349361.6787
[2025-11-29 19:35:01] 2025-11-30 00:34:02,773 | INFO     | mean x: 1764427198.5961707
[2025-11-29 19:35:01] 2025-11-30 00:34:02,773 | INFO     | mean y: 2882791.6544821584
[2025-11-29 19:35:01] 2025-11-30 00:34:02,773 | INFO     | intersect: -9916259103.268894
[2025-11-29 19:35:01] 2025-11-30 00:34:02,775 | INFO     | chi2: 2.556134452733651
[2025-11-29 19:35:01] 2025-11-30 00:34:02,775 | INFO     | current chi2=2.556134452733651 (change=25.964553279699548 %)
[2025-11-29 19:35:01] 2025-11-30 00:34:02,777 | INFO     | sum of square deviations: 464254979361.03455
[2025-11-29 19:35:01] 2025-11-30 00:34:02,806 | INFO     | sum of deviations: 2697051305613.1113
[2025-11-29 19:35:01] 2025-11-30 00:34:02,807 | INFO     | mean x: 1764427046.097902
[2025-11-29 19:35:01] 2025-11-30 00:34:02,807 | INFO     | mean y: 2884104.713286713
[2025-11-29 19:35:01] 2025-11-30 00:34:02,807 | INFO     | intersect: -10247410409.92394
[2025-11-29 19:35:01] 2025-11-30 00:34:02,808 | INFO     | chi2: 2.379984585440491
[2025-11-29 19:35:01] 2025-11-30 00:34:02,808 | INFO     | current chi2=2.379984585440491 (change=6.891259851561293 %)
[2025-11-29 19:35:01] 2025-11-30 00:34:02,808 | INFO     | right removable region: 1143
[2025-11-29 19:35:01] 2025-11-30 00:34:02,809 | INFO     | sum of square deviations: 476535457731.89233
[2025-11-29 19:35:01] 2025-11-30 00:34:02,833 | INFO     | sum of deviations: 1778101924718.487
[2025-11-29 19:35:01] 2025-11-30 00:34:02,833 | INFO     | mean x: 1764427656.0935876
[2025-11-29 19:35:01] 2025-11-30 00:34:02,833 | INFO     | mean y: 2876293.254766031
[2025-11-29 19:35:01] 2025-11-30 00:34:02,833 | INFO     | intersect: -6580751767.202506
[2025-11-29 19:35:01] 2025-11-30 00:34:02,834 | INFO     | chi2: 4.410907646837111
[2025-11-29 19:35:01] 2025-11-30 00:34:02,834 | INFO     | current chi2=4.410907646837111 (change=31.67290906698192 %)
[2025-11-29 19:35:01] 2025-11-30 00:34:02,835 | INFO     | sum of square deviations: 470368116567.19196
[2025-11-29 19:35:01] 2025-11-30 00:34:02,861 | INFO     | sum of deviations: 1703861057801.9946
[2025-11-29 19:35:01] 2025-11-30 00:34:02,862 | INFO     | mean x: 1764427808.5935595
[2025-11-29 19:35:01] 2025-11-30 00:34:02,862 | INFO     | mean y: 2878128.674499565
[2025-11-29 19:35:01] 2025-11-30 00:34:02,862 | INFO     | intersect: -6388583636.009168
[2025-11-29 19:35:01] 2025-11-30 00:34:02,863 | INFO     | chi2: 4.360810251093181
[2025-11-29 19:35:01] 2025-11-30 00:34:02,863 | INFO     | current chi2=4.360810251093181 (change=1.1357616108750999 %)
[2025-11-29 19:35:01] 2025-11-30 00:34:02,863 | INFO     | left removable region: 20
[2025-11-29 19:35:01] 2025-11-30 00:34:02,864 | INFO     | sum of square deviations: 439154846121.87695
[2025-11-29 19:35:01] 2025-11-30 00:34:02,886 | INFO     | sum of deviations: 2208448631856.779
[2025-11-29 19:35:01] 2025-11-30 00:34:02,886 | INFO     | mean x: 1764427625.5983973
[2025-11-29 19:35:01] 2025-11-30 00:34:02,887 | INFO     | mean y: 2896259.2101513804
[2025-11-29 19:35:01] 2025-11-30 00:34:02,887 | INFO     | intersect: -8870164826.586596
[2025-11-29 19:35:01] 2025-11-30 00:34:02,888 | INFO     | chi2: 0.24460420595451296
[2025-11-29 19:35:01] 2025-11-30 00:34:02,888 | INFO     | current memory leak: 5.03 B/s (using 1123 data points, chi2=0.24)
[2025-11-29 19:35:01] 2025-11-30 00:34:02,889 | INFO     | could have reported an average CPU frequency of 2626 MHz (42 samples)
[2025-11-29 19:35:01] 2025-11-30 00:34:02,889 | INFO     | ..............................
[2025-11-29 19:35:01] 2025-11-30 00:34:02,889 | INFO     | . Timing measurements:
[2025-11-29 19:35:01] 2025-11-30 00:34:02,889 | INFO     | . get job = 0 s
[2025-11-29 19:35:01] 2025-11-30 00:34:02,889 | INFO     | . initial setup = 2 s
[2025-11-29 19:35:01] 2025-11-30 00:34:02,889 | INFO     | . payload setup = 5 s
[2025-11-29 19:35:01] 2025-11-30 00:34:02,889 | INFO     | . stage-in = 0 s
[2025-11-29 19:35:01] 2025-11-30 00:34:02,889 | INFO     | . payload execution = 70648 s
[2025-11-29 19:35:01] 2025-11-30 00:34:02,889 | INFO     | . stage-out = 4 s
[2025-11-29 19:35:01] 2025-11-30 00:34:02,890 | INFO     | . log creation = 0 s
[2025-11-29 19:35:01] 2025-11-30 00:34:02,890 | INFO     | ..............................
[2025-11-29 19:35:01] 2025-11-30 00:34:03,002 | INFO     | 
[2025-11-29 19:35:01] 2025-11-30 00:34:03,002 | INFO     | job summary report
[2025-11-29 19:35:01] 2025-11-30 00:34:03,002 | INFO     | --------------------------------------------------
[2025-11-29 19:35:01] 2025-11-30 00:34:03,002 | INFO     | PanDA job id: 6898761855
[2025-11-29 19:35:01] 2025-11-30 00:34:03,002 | INFO     | task id: 47556161
[2025-11-29 19:35:01] 2025-11-30 00:34:03,003 | INFO     | errors: (none)
[2025-11-29 19:35:01] 2025-11-30 00:34:03,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 19:35:01] 2025-11-30 00:34:03,003 | INFO     | pilot state: finished 
[2025-11-29 19:35:01] 2025-11-30 00:34:03,003 | INFO     | transexitcode: 0
[2025-11-29 19:35:01] 2025-11-30 00:34:03,003 | INFO     | exeerrorcode: 0
[2025-11-29 19:35:01] 2025-11-30 00:34:03,003 | INFO     | exeerrordiag: 
[2025-11-29 19:35:01] 2025-11-30 00:34:03,004 | INFO     | exitcode: 0
[2025-11-29 19:35:01] 2025-11-30 00:34:03,004 | INFO     | exitmsg: OK
[2025-11-29 19:35:01] 2025-11-30 00:34:03,004 | INFO     | cpuconsumptiontime: 548734 s
[2025-11-29 19:35:01] 2025-11-30 00:34:03,004 | INFO     | nevents: 1000
[2025-11-29 19:35:01] 2025-11-30 00:34:03,004 | INFO     | neventsw: 0
[2025-11-29 19:35:01] 2025-11-30 00:34:03,004 | INFO     | pid: 2860
[2025-11-29 19:35:01] 2025-11-30 00:34:03,005 | INFO     | pgrp: 2860
[2025-11-29 19:35:01] 2025-11-30 00:34:03,005 | INFO     | corecount: 8
[2025-11-29 19:35:01] 2025-11-30 00:34:03,005 | INFO     | event service: False
[2025-11-29 19:35:01] 2025-11-30 00:34:03,005 | INFO     | sizes: {0: 2284309, 1: 2284309, 4: 2284599, 11: 2284627, 70658: 2341392, 70663: 2350414, 70665: 2350598, 70670: 2350844}
[2025-11-29 19:35:01] 2025-11-30 00:34:03,005 | INFO     | --------------------------------------------------
[2025-11-29 19:35:01] 2025-11-30 00:34:03,005 | INFO     | 
[2025-11-29 19:35:01] 2025-11-30 00:34:03,006 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-29 19:35:01] 2025-11-30 00:34:03,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,024 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,025 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,026 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,026 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,026 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,027 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 19:35:01] 2025-11-30 00:34:03,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,027 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 19:35:01] 2025-11-30 00:34:03,027 | INFO     | job 6898761855 has completed (purged errors)
[2025-11-29 19:35:01] 2025-11-30 00:34:03,027 | INFO     | overall cleanup function is called
[2025-11-29 19:35:01] 2025-11-30 00:34:04,040 | INFO     | --- collectZombieJob: --- 10, [2860]
[2025-11-29 19:35:01] 2025-11-30 00:34:04,041 | INFO     | zombie collector waiting for pid 2860
[2025-11-29 19:35:01] 2025-11-30 00:34:04,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 19:35:01] 2025-11-30 00:34:04,041 | INFO     | collected zombie processes
[2025-11-29 19:35:01] 2025-11-30 00:34:04,041 | INFO     | will attempt to kill all subprocesses of pid=2860
[2025-11-29 19:35:01] 2025-11-30 00:34:04,165 | INFO     | process IDs to be killed: [2860] (in reverse order)
[2025-11-29 19:35:01] 2025-11-30 00:34:04,232 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 19:35:01] 2025-11-30 00:34:04,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 19:35:01] 2025-11-30 00:34:04,238 | INFO     | did not find any defunct processes belonging to 2860
[2025-11-29 19:35:01] 2025-11-30 00:34:04,243 | INFO     | did not find any defunct processes belonging to 2860
[2025-11-29 19:35:01] 2025-11-30 00:34:04,245 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 19:35:01] 2025-11-30 00:34:04,245 | INFO     | ready for new job
[2025-11-29 19:35:01] 2025-11-30 00:34:04,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 19:35:01] 2025-11-30 00:34:04,249 | INFO     | ***************************************
[2025-11-29 19:35:01] 2025-11-30 00:34:04,249 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 19:35:01] 2025-11-30 00:34:04,249 | INFO     | ***************************************
[2025-11-29 19:35:01] 2025-11-30 00:34:04,249 | INFO     | 
[2025-11-29 19:35:01] 2025-11-30 00:34:04,250 | INFO     | architecture information:
[2025-11-29 19:35:01] 2025-11-30 00:34:04,255 | INFO     | executing command: cat /etc/os-release
[2025-11-29 19:35:01] 2025-11-30 00:34:04,271 | INFO     | cat /etc/os-release:
[2025-11-29 19:35:01] NAME="CentOS Linux"
[2025-11-29 19:35:01] VERSION="7 (Core)"
[2025-11-29 19:35:01] ID="centos"
[2025-11-29 19:35:01] ID_LIKE="rhel fedora"
[2025-11-29 19:35:01] VERSION_ID="7"
[2025-11-29 19:35:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 19:35:01] ANSI_COLOR="0;31"
[2025-11-29 19:35:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 19:35:01] HOME_URL="https://www.centos.org/"
[2025-11-29 19:35:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 19:35:01] 
[2025-11-29 19:35:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 19:35:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 19:35:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 19:35:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 19:35:01] 
[2025-11-29 19:35:01] 2025-11-30 00:34:04,271 | INFO     | ***************************************
[2025-11-29 19:35:01] 2025-11-30 00:34:04,774 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-29 19:35:01] 2025-11-30 00:34:04,799 | INFO     | sufficient remaining disk space (25733103616 B)
[2025-11-29 19:35:01] 2025-11-30 00:34:04,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 19:35:01] 2025-11-30 00:34:04,800 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 19:35:01] 2025-11-30 00:34:04,800 | INFO     | update_server=False
[2025-11-29 19:35:01] 2025-11-30 00:34:04,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 19:35:01] 2025-11-30 00:34:04,801 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 19:35:01] 2025-11-30 00:34:04,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 19:35:01] 2025-11-30 00:34:04,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 19:35:01] 2025-11-30 00:34:04,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 19:35:01] 2025-11-30 00:34:04,802 | INFO     | aborting loop
[2025-11-29 19:35:01] 2025-11-30 00:34:05,544 | INFO     | all data control threads have been joined
[2025-11-29 19:35:01] 2025-11-30 00:34:05,807 | INFO     | [job] queue monitor thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:05,807 | INFO     | [job] job monitor thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:05,808 | INFO     | [job] retrieve thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:05,853 | INFO     | all job control threads have been joined
[2025-11-29 19:35:01] 2025-11-30 00:34:05,879 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:06,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:06,197 | INFO     | [payload] validate_post thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:06,238 | INFO     | all payload control threads have been joined
[2025-11-29 19:35:01] 2025-11-30 00:34:06,359 | INFO     | [job] validate thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:06,359 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:06,395 | INFO     | [data] copytool_in thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:06,549 | INFO     | [data] control thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:06,656 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:06,803 | INFO     | [data] copytool_out thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:06,860 | INFO     | [job] control thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:07,192 | INFO     | [payload] failed_post thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:07,244 | INFO     | [payload] control thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:08,808 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 19:35:01] 2025-11-30 00:34:35,029 | INFO     | PID=28693 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 19:35:01] 2025-11-30 00:34:35,029 | INFO     | .. there are 3 such processes running
[2025-11-29 19:35:01] 2025-11-30 00:34:35,030 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 19:35:01] 2025-11-30 00:34:35,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 19:35:01] 2025-11-30 00:34:35,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 19:35:01] 2025-11-30 00:34:54,715 | INFO     | [monitor] cgroup control has ended
[2025-11-29 19:35:01] 2025-11-30 00:34:56,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139834063009600)>', '<ExcThread(monitor, started 139833171232512)>']
[2025-11-29 19:35:01] 2025-11-30 00:34:57,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 19:35:01] 2025-11-30 00:34:57,142 | INFO     | [monitor] control thread has ended
[2025-11-29 19:35:01] 2025-11-30 00:35:01,326 | INFO     | all workflow threads have been joined
[2025-11-29 19:35:01] 2025-11-30 00:35:01,326 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 19:35:01] 2025-11-30 00:35:01,326 | INFO     | traces error code: 0
[2025-11-29 19:35:01] 2025-11-30 00:35:01,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 19:35:01] 2025-11-30 00:35:01,450 [wrapper] ==== pilot stdout END ====
[2025-11-29 19:35:01] 2025-11-30 00:35:01,452 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 19:35:01] 2025-11-30 00:35:01,454 [wrapper] pilotpid: 28693
[2025-11-29 19:35:01] 2025-11-30 00:35:01,457 [wrapper] Pilot exit status: 0
[2025-11-29 19:35:01] 2025-11-30 00:35:01,465 [wrapper] pandaids: 6898761855
[2025-11-29 19:35:01] 2025-11-30 00:35:01,503 [wrapper] cleanup supervisor_pilot 21731 28694
[2025-11-29 19:35:01] 2025-11-30 00:35:01,505 [wrapper] Test setup, not cleaning
[2025-11-29 19:35:01] 2025-11-30 00:35:01,507 [wrapper] apfmon messages muted
[2025-11-29 19:35:01] 2025-11-30 00:35:01,509 [wrapper] ==== wrapper stdout END ====
[2025-11-29 19:35:01] 2025-11-30 00:35:01,511 [wrapper] ==== wrapper stderr END ====
[2025-11-29 19:35:01]  *** Error codes and diagnostics ***
[2025-11-29 19:35:01]     "exeErrorCode": 0,
[2025-11-29 19:35:01]     "exeErrorDiag": "",
[2025-11-29 19:35:01]     "pilotErrorCode": 0,
[2025-11-29 19:35:01]     "pilotErrorDiag": "",
[2025-11-29 19:35:01]  *** Listing of results directory ***
[2025-11-29 19:35:01] total 1335344
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 18:14 pilot3.tar.gz
[2025-11-29 19:35:01] -rwx------ 1 boincer umatlas     36292 Nov 26 18:23 runpilot2-wrapper.sh
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 18:23 queuedata.json
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas       100 Nov 28 23:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 19:35:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 23:55 run_atlas
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas       105 Nov 28 23:55 job.xml
[2025-11-29 19:35:01] -rw-r--r-- 2 boincer umatlas 409276937 Nov 28 23:55 EVNT.47483658._002733.pool.root.1
[2025-11-29 19:35:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 23:55 start_atlas.sh
[2025-11-29 19:35:01] drwxrwx--x 2 boincer umatlas      4096 Nov 28 23:55 shared
[2025-11-29 19:35:01] -rw-r--r-- 2 boincer umatlas    590106 Nov 28 23:55 input.tar.gz
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas         0 Nov 28 23:55 boinc_lockfile
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas      2783 Nov 28 23:55 pandaJob.out
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas        57 Nov 28 23:55 setup.sh.local
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas    991834 Nov 28 23:55 agis_schedconf.cvmfs.json
[2025-11-29 19:35:01] drwx------ 5 boincer umatlas      4096 Nov 28 23:55 pilot3
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas       533 Nov 29 19:20 boinc_task_state.xml
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas      5952 Nov 29 19:30 init_data.xml
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas 930021862 Nov 29 19:33 HITS.47556161._007151.pool.root.1
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas      1068 Nov 29 19:33 memory_monitor_summary.json
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas   1516240 Nov 29 19:33 agis_ddmendpoints.agis.ALL.json
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas   2317985 Nov 29 19:33 log.47556161._007151.job.log.tgz.1
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas      8659 Nov 29 19:34 heartbeat.json
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas        95 Nov 29 19:34 pilot_heartbeat.json
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 29 19:34 boinc_mmap_file
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas        29 Nov 29 19:34 wrapper_checkpoint.txt
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas      4821 Nov 29 19:35 pilotlog.txt
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas   9766817 Nov 29 19:35 log.47556161._007151.job.log.1
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas       353 Nov 29 19:35 output.list
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas       620 Nov 29 19:35 runtime_log
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas  12103680 Nov 29 19:35 result.tar.gz
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas      9338 Nov 29 19:35 runtime_log.err
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas       667 Nov 29 19:35 PqkNDmT2di8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFIKKDmGDM7xm.diag
[2025-11-29 19:35:01] -rw-r--r-- 1 boincer umatlas     21091 Nov 29 19:35 stderr.txt
[2025-11-29 19:35:01] HITS file was successfully produced:
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas 930021862 Nov 29 19:33 shared/HITS.pool.root.1
[2025-11-29 19:35:01]  *** Contents of shared directory: ***
[2025-11-29 19:35:01] total 1320340
[2025-11-29 19:35:01] -rw-r--r-- 2 boincer umatlas 409276937 Nov 28 23:55 ATLAS.root_0
[2025-11-29 19:35:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 23:55 start_atlas.sh
[2025-11-29 19:35:01] -rw-r--r-- 2 boincer umatlas    590106 Nov 28 23:55 input.tar.gz
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas 930021862 Nov 29 19:33 HITS.pool.root.1
[2025-11-29 19:35:01] -rw------- 1 boincer umatlas  12103680 Nov 29 19:35 result.tar.gz
19:35:02 (25000): run_atlas exited; CPU time 547972.940078
19:35:02 (25000): called boinc_finish(0)

</stderr_txt>
]]>

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