Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:49:15 (4172978): wrapper (7.7.26015): starting
12:49:15 (4172978): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 12:49:15] Arguments: --nthreads 12
[2025-11-29 12:49:15] Threads: 12
[2025-11-29 12:49:15] Checking for CVMFS
[2025-11-29 12:49:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 12:49:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 12:49:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 12:49:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 12:49:16] 2.13.3.0 9777 11338 91588 153441 2 81 2703304 4097024 1044 130560 0 8522793 99.989 420877 12230 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-29 12:49:16] CVMFS is ok
[2025-11-29 12:49:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 12:49:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 12:49:16] Further information can be found at the LHC@home message board.
[2025-11-29 12:49:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 12:49:16] Checking for apptainer binary...
[2025-11-29 12:49:16] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-29 12:49:16] apptainer is not installed, using version from CVMFS
[2025-11-29 12:49:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 12:49:16] pckelar6.cern.ch
[2025-11-29 12:49:16] apptainer works
[2025-11-29 12:49:16] Set ATHENA_PROC_NUMBER=12
[2025-11-29 12:49:16] Set ATHENA_CORE_NUMBER=12
[2025-11-29 12:49:16] Starting ATLAS job with PandaID=6895673720
[2025-11-29 12:49:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 00:58:45]  *** The last 200 lines of the pilot log: ***
[2025-11-30 00:58:45] 2025-11-29 23:58:26,135 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2825.1167499999997
[2025-11-30 00:58:45] 2025-11-29 23:58:26,138 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6895673720/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,139 | INFO     | extracted standard info from prmon json
[2025-11-30 00:58:45] 2025-11-29 23:58:26,139 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 00:58:45] 2025-11-29 23:58:26,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 00:58:45] 2025-11-29 23:58:26,148 | INFO     | fitting pss+swap vs Time
[2025-11-30 00:58:45] 2025-11-29 23:58:26,149 | INFO     | sum of square deviations: 114296754339.643
[2025-11-30 00:58:45] 2025-11-29 23:58:26,158 | INFO     | sum of deviations: 1516723186526.5994
[2025-11-30 00:58:45] 2025-11-29 23:58:26,158 | INFO     | mean x: 1764438835.9776847
[2025-11-30 00:58:45] 2025-11-29 23:58:26,158 | INFO     | mean y: 3585733.9748953977
[2025-11-30 00:58:45] 2025-11-29 23:58:26,158 | INFO     | intersect: -23410598764.938293
[2025-11-30 00:58:45] 2025-11-29 23:58:26,159 | INFO     | chi2: 6.367096242120561
[2025-11-30 00:58:45] 2025-11-29 23:58:26,160 | INFO     | sum of square deviations: 111922449199.82881
[2025-11-30 00:58:45] 2025-11-29 23:58:26,169 | INFO     | sum of deviations: 1786691140500.5244
[2025-11-30 00:58:45] 2025-11-29 23:58:26,169 | INFO     | mean x: 1764438683.4845505
[2025-11-30 00:58:45] 2025-11-29 23:58:26,169 | INFO     | mean y: 3603055.320224719
[2025-11-30 00:58:45] 2025-11-29 23:58:26,169 | INFO     | intersect: -28163283804.970867
[2025-11-30 00:58:45] 2025-11-29 23:58:26,170 | INFO     | chi2: 3.5648378251521913
[2025-11-30 00:58:45] 2025-11-29 23:58:26,170 | INFO     | current chi2=3.5648378251521913 (change=44.011560535718836 %)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,171 | INFO     | sum of square deviations: 109581260959.94922
[2025-11-30 00:58:45] 2025-11-29 23:58:26,180 | INFO     | sum of deviations: 1915246535890.9644
[2025-11-30 00:58:45] 2025-11-29 23:58:26,180 | INFO     | mean x: 1764438530.9915135
[2025-11-30 00:58:45] 2025-11-29 23:58:26,180 | INFO     | mean y: 3611426.6605374822
[2025-11-30 00:58:45] 2025-11-29 23:58:26,180 | INFO     | intersect: -30835007828.771732
[2025-11-30 00:58:45] 2025-11-29 23:58:26,181 | INFO     | chi2: 2.798293106095226
[2025-11-30 00:58:45] 2025-11-29 23:58:26,181 | INFO     | current chi2=2.798293106095226 (change=21.50293384031403 %)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,181 | INFO     | right removable region: 706
[2025-11-30 00:58:45] 2025-11-29 23:58:26,182 | INFO     | sum of square deviations: 111922065083.79785
[2025-11-30 00:58:45] 2025-11-29 23:58:26,191 | INFO     | sum of deviations: 1258978907846.37
[2025-11-30 00:58:45] 2025-11-29 23:58:26,191 | INFO     | mean x: 1764438988.483146
[2025-11-30 00:58:45] 2025-11-29 23:58:26,191 | INFO     | mean y: 3602260.9058988765
[2025-11-30 00:58:45] 2025-11-29 23:58:26,191 | INFO     | intersect: -19844061102.15726
[2025-11-30 00:58:45] 2025-11-29 23:58:26,192 | INFO     | chi2: 4.006016473422802
[2025-11-30 00:58:45] 2025-11-29 23:58:26,192 | INFO     | current chi2=4.006016473422802 (change=37.082520491498045 %)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,192 | INFO     | sum of square deviations: 109580666703.79662
[2025-11-30 00:58:45] 2025-11-29 23:58:26,201 | INFO     | sum of deviations: 1183905663364.8125
[2025-11-30 00:58:45] 2025-11-29 23:58:26,202 | INFO     | mean x: 1764439140.983027
[2025-11-30 00:58:45] 2025-11-29 23:58:26,202 | INFO     | mean y: 3607148.900990099
[2025-11-30 00:58:45] 2025-11-29 23:58:26,202 | INFO     | intersect: -19059331182.354626
[2025-11-30 00:58:45] 2025-11-29 23:58:26,202 | INFO     | chi2: 3.9274057554941892
[2025-11-30 00:58:45] 2025-11-29 23:58:26,202 | INFO     | current chi2=3.9274057554941892 (change=1.9623163921102562 %)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,203 | INFO     | left removable region: 20
[2025-11-30 00:58:45] 2025-11-29 23:58:26,203 | INFO     | sum of square deviations: 100103633157.4984
[2025-11-30 00:58:45] 2025-11-29 23:58:26,212 | INFO     | sum of deviations: 1473618654405.561
[2025-11-30 00:58:45] 2025-11-29 23:58:26,212 | INFO     | mean x: 1764439110.4985423
[2025-11-30 00:58:45] 2025-11-29 23:58:26,212 | INFO     | mean y: 3642441.059766764
[2025-11-30 00:58:45] 2025-11-29 23:58:26,212 | INFO     | intersect: -25970543567.77884
[2025-11-30 00:58:45] 2025-11-29 23:58:26,213 | INFO     | chi2: 0.23790732931811726
[2025-11-30 00:58:45] 2025-11-29 23:58:26,213 | INFO     | current memory leak: 14.72 B/s (using 686 data points, chi2=0.24)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,213 | INFO     | could have reported an average CPU frequency of 2801 MHz (27 samples)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,213 | INFO     | ..............................
[2025-11-30 00:58:45] 2025-11-29 23:58:26,214 | INFO     | . Timing measurements:
[2025-11-30 00:58:45] 2025-11-29 23:58:26,214 | INFO     | . get job = 0 s
[2025-11-30 00:58:45] 2025-11-29 23:58:26,214 | INFO     | . initial setup = 1 s
[2025-11-30 00:58:45] 2025-11-29 23:58:26,214 | INFO     | . payload setup = 8 s
[2025-11-30 00:58:45] 2025-11-29 23:58:26,214 | INFO     | . stage-in = 0 s
[2025-11-30 00:58:45] 2025-11-29 23:58:26,214 | INFO     | . payload execution = 43703 s
[2025-11-30 00:58:45] 2025-11-29 23:58:26,214 | INFO     | . stage-out = 1 s
[2025-11-30 00:58:45] 2025-11-29 23:58:26,214 | INFO     | . log creation = 0 s
[2025-11-30 00:58:45] 2025-11-29 23:58:26,214 | INFO     | ..............................
[2025-11-30 00:58:45] 2025-11-29 23:58:26,283 | INFO     | 
[2025-11-30 00:58:45] 2025-11-29 23:58:26,284 | INFO     | job summary report
[2025-11-30 00:58:45] 2025-11-29 23:58:26,284 | INFO     | --------------------------------------------------
[2025-11-30 00:58:45] 2025-11-29 23:58:26,284 | INFO     | PanDA job id: 6895673720
[2025-11-30 00:58:45] 2025-11-29 23:58:26,284 | INFO     | task id: 47556161
[2025-11-30 00:58:45] 2025-11-29 23:58:26,284 | INFO     | errors: (none)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,284 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 00:58:45] 2025-11-29 23:58:26,285 | INFO     | pilot state: finished 
[2025-11-30 00:58:45] 2025-11-29 23:58:26,285 | INFO     | transexitcode: 0
[2025-11-30 00:58:45] 2025-11-29 23:58:26,285 | INFO     | exeerrorcode: 0
[2025-11-30 00:58:45] 2025-11-29 23:58:26,285 | INFO     | exeerrordiag: 
[2025-11-30 00:58:45] 2025-11-29 23:58:26,285 | INFO     | exitcode: 0
[2025-11-30 00:58:45] 2025-11-29 23:58:26,285 | INFO     | exitmsg: OK
[2025-11-30 00:58:45] 2025-11-29 23:58:26,285 | INFO     | cpuconsumptiontime: 506640 s
[2025-11-30 00:58:45] 2025-11-29 23:58:26,286 | INFO     | nevents: 1000
[2025-11-30 00:58:45] 2025-11-29 23:58:26,286 | INFO     | neventsw: 0
[2025-11-30 00:58:45] 2025-11-29 23:58:26,286 | INFO     | pid: 4184409
[2025-11-30 00:58:45] 2025-11-29 23:58:26,286 | INFO     | pgrp: 4184409
[2025-11-30 00:58:45] 2025-11-29 23:58:26,286 | INFO     | corecount: 12
[2025-11-30 00:58:45] 2025-11-29 23:58:26,286 | INFO     | event service: False
[2025-11-30 00:58:45] 2025-11-29 23:58:26,287 | INFO     | sizes: {0: 2284312, 1: 2284312, 6: 2284602, 12: 2284630, 43716: 2328883, 43719: 2338061, 43723: 2338251}
[2025-11-30 00:58:45] 2025-11-29 23:58:26,287 | INFO     | --------------------------------------------------
[2025-11-30 00:58:45] 2025-11-29 23:58:26,287 | INFO     | 
[2025-11-30 00:58:45] 2025-11-29 23:58:26,287 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-11-30 00:58:45] 2025-11-29 23:58:26,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,302 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,302 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,302 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 00:58:45] 2025-11-29 23:58:26,305 | INFO     | job 6895673720 has completed (purged errors)
[2025-11-30 00:58:45] 2025-11-29 23:58:26,305 | INFO     | overall cleanup function is called
[2025-11-30 00:58:45] 2025-11-29 23:58:27,310 | INFO     | PID=4176859 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-30 00:58:45] 2025-11-29 23:58:27,310 | INFO     | .. there are 2 such processes running
[2025-11-30 00:58:45] 2025-11-29 23:58:27,323 | INFO     | --- collectZombieJob: --- 10, [4184409]
[2025-11-30 00:58:45] 2025-11-29 23:58:27,323 | INFO     | zombie collector waiting for pid 4184409
[2025-11-30 00:58:45] 2025-11-29 23:58:27,323 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 00:58:45] 2025-11-29 23:58:27,323 | INFO     | collected zombie processes
[2025-11-30 00:58:45] 2025-11-29 23:58:27,323 | INFO     | will attempt to kill all subprocesses of pid=4184409
[2025-11-30 00:58:45] 2025-11-29 23:58:27,462 | INFO     | process IDs to be killed: [4184409] (in reverse order)
[2025-11-30 00:58:45] 2025-11-29 23:58:27,520 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 00:58:45] 2025-11-29 23:58:27,520 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 00:58:45] 2025-11-29 23:58:27,523 | INFO     | did not find any defunct processes belonging to 4184409
[2025-11-30 00:58:45] 2025-11-29 23:58:27,527 | INFO     | did not find any defunct processes belonging to 4184409
[2025-11-30 00:58:45] 2025-11-29 23:58:27,527 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 00:58:45] 2025-11-29 23:58:27,528 | INFO     | ready for new job
[2025-11-30 00:58:45] 2025-11-29 23:58:27,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 00:58:45] 2025-11-29 23:58:27,530 | INFO     | ***************************************
[2025-11-30 00:58:45] 2025-11-29 23:58:27,530 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 00:58:45] 2025-11-29 23:58:27,530 | INFO     | ***************************************
[2025-11-30 00:58:45] 2025-11-29 23:58:27,530 | INFO     | 
[2025-11-30 00:58:45] 2025-11-29 23:58:27,531 | INFO     | architecture information:
[2025-11-30 00:58:45] 2025-11-29 23:58:27,531 | INFO     | executing command: cat /etc/os-release
[2025-11-30 00:58:45] 2025-11-29 23:58:27,540 | INFO     | cat /etc/os-release:
[2025-11-30 00:58:45] NAME="CentOS Linux"
[2025-11-30 00:58:45] VERSION="7 (Core)"
[2025-11-30 00:58:45] ID="centos"
[2025-11-30 00:58:45] ID_LIKE="rhel fedora"
[2025-11-30 00:58:45] VERSION_ID="7"
[2025-11-30 00:58:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 00:58:45] ANSI_COLOR="0;31"
[2025-11-30 00:58:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 00:58:45] HOME_URL="https://www.centos.org/"
[2025-11-30 00:58:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 00:58:45] 
[2025-11-30 00:58:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 00:58:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 00:58:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 00:58:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 00:58:45] 
[2025-11-30 00:58:45] 2025-11-29 23:58:27,541 | INFO     | ***************************************
[2025-11-30 00:58:45] 2025-11-29 23:58:28,044 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-11-30 00:58:45] 2025-11-29 23:58:28,062 | INFO     | sufficient remaining disk space (866624995328 B)
[2025-11-30 00:58:45] 2025-11-29 23:58:28,063 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 00:58:45] 2025-11-29 23:58:28,063 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 00:58:45] 2025-11-29 23:58:28,063 | INFO     | update_server=False
[2025-11-30 00:58:45] 2025-11-29 23:58:28,063 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 00:58:45] 2025-11-29 23:58:28,064 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 00:58:45] 2025-11-29 23:58:28,064 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 00:58:45] 2025-11-29 23:58:28,064 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 00:58:45] 2025-11-29 23:58:28,065 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 00:58:45] 2025-11-29 23:58:28,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 00:58:45] 2025-11-29 23:58:28,066 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 00:58:45] 2025-11-29 23:58:28,247 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 00:58:45] 2025-11-29 23:58:28,247 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 00:58:45] 2025-11-29 23:58:28,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 00:58:45] 2025-11-29 23:58:28,248 | INFO     | will abort loop
[2025-11-30 00:58:45] 2025-11-29 23:58:28,312 | INFO     | all data control threads have been joined
[2025-11-30 00:58:45] 2025-11-29 23:58:28,360 | INFO     | all payload control threads have been joined
[2025-11-30 00:58:45] 2025-11-29 23:58:28,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 00:58:45] 2025-11-29 23:58:29,069 | INFO     | [job] retrieve thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:29,070 | INFO     | [job] queue monitor thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:29,251 | INFO     | [job] job monitor thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:29,318 | INFO     | [data] control thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:29,366 | INFO     | [payload] control thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:29,415 | INFO     | all job control threads have been joined
[2025-11-30 00:58:45] 2025-11-29 23:58:29,485 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:29,657 | INFO     | [payload] failed_post thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:30,071 | INFO     | [data] copytool_out thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:30,236 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:30,237 | INFO     | [payload] validate_post thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:30,382 | INFO     | [job] validate thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:30,385 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:30,420 | INFO     | [job] control thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:30,492 | INFO     | [data] copytool_in thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:32,377 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:39,044 | INFO     | job.realtimelogging is not enabled
[2025-11-30 00:58:45] 2025-11-29 23:58:39,726 | INFO     | [monitor] cgroup control has ended
[2025-11-30 00:58:45] 2025-11-29 23:58:40,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 00:58:45] 2025-11-29 23:58:40,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229212227392)>', '<ExcThread(monitor, started 140228526335744)>']
[2025-11-30 00:58:45] 2025-11-29 23:58:41,130 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 00:58:45] 2025-11-29 23:58:41,130 | INFO     | [monitor] control thread has ended
[2025-11-30 00:58:45] 2025-11-29 23:58:45,211 | INFO     | all workflow threads have been joined
[2025-11-30 00:58:45] 2025-11-29 23:58:45,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 00:58:45] 2025-11-29 23:58:45,211 | INFO     | traces error code: 0
[2025-11-30 00:58:45] 2025-11-29 23:58:45,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 00:58:45] 2025-11-29 23:58:45,319 [wrapper] ==== pilot stdout END ====
[2025-11-30 00:58:45] 2025-11-29 23:58:45,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 00:58:45] 2025-11-29 23:58:45,325 [wrapper] pilotpid: 4176859
[2025-11-30 00:58:45] 2025-11-29 23:58:45,327 [wrapper] Pilot exit status: 0
[2025-11-30 00:58:45] 2025-11-29 23:58:45,337 [wrapper] pandaids: 6895673720
[2025-11-30 00:58:45] 2025-11-29 23:58:45,380 [wrapper] cleanup supervisor_pilot  251174 4176860
[2025-11-30 00:58:45] 2025-11-29 23:58:45,383 [wrapper] Test setup, not cleaning
[2025-11-30 00:58:45] 2025-11-29 23:58:45,385 [wrapper] apfmon messages muted
[2025-11-30 00:58:45] 2025-11-29 23:58:45,388 [wrapper] ==== wrapper stdout END ====
[2025-11-30 00:58:45] 2025-11-29 23:58:45,390 [wrapper] ==== wrapper stderr END ====
[2025-11-30 00:58:45]  *** Error codes and diagnostics ***
[2025-11-30 00:58:45]     "exeErrorCode": 0,
[2025-11-30 00:58:45]     "exeErrorDiag": "",
[2025-11-30 00:58:45]     "pilotErrorCode": 0,
[2025-11-30 00:58:45]     "pilotErrorDiag": "",
[2025-11-30 00:58:45]  *** Listing of results directory ***
[2025-11-30 00:58:45] total 1313412
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc    576529 Nov 24 14:08 pilot3.tar.gz
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc      5112 Nov 24 14:20 queuedata.json
[2025-11-30 00:58:45] -rwx------. 1 boinc boinc     36292 Nov 24 14:21 runpilot2-wrapper.sh
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc       100 Nov 29 12:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 00:58:45] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 12:49 run_atlas
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc       105 Nov 29 12:49 job.xml
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc      6293 Nov 29 12:49 init_data.xml
[2025-11-30 00:58:45] -rw-r--r--. 2 boinc boinc 407334636 Nov 29 12:49 EVNT.47483658._002046.pool.root.1
[2025-11-30 00:58:45] -rw-r--r--. 2 boinc boinc     15847 Nov 29 12:49 start_atlas.sh
[2025-11-30 00:58:45] drwxrwx--x. 2 boinc boinc        68 Nov 29 12:49 shared
[2025-11-30 00:58:45] -rw-r--r--. 2 boinc boinc    590099 Nov 29 12:49 input.tar.gz
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc         0 Nov 29 12:49 boinc_lockfile
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc      2784 Nov 29 12:49 pandaJob.out
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc    991834 Nov 29 12:49 agis_schedconf.cvmfs.json
[2025-11-30 00:58:45] drwx------. 5 boinc boinc      4096 Nov 29 12:49 pilot3
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc       533 Nov 30 00:46 boinc_task_state.xml
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc 916783905 Nov 30 00:57 HITS.47556161._000300.pool.root.1
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc        95 Nov 30 00:57 pilot_heartbeat.json
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc      1042 Nov 30 00:58 memory_monitor_summary.json
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc   1516240 Nov 30 00:58 agis_ddmendpoints.agis.ALL.json
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc   2412198 Nov 30 00:58 log.47556161._000300.job.log.tgz.1
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc      8618 Nov 30 00:58 heartbeat.json
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc      8192 Nov 30 00:58 boinc_mmap_file
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc        29 Nov 30 00:58 wrapper_checkpoint.txt
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc      4811 Nov 30 00:58 pilotlog.txt
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc   6042652 Nov 30 00:58 log.47556161._000300.job.log.1
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc       353 Nov 30 00:58 output.list
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc       620 Nov 30 00:58 runtime_log
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc   8478720 Nov 30 00:58 result.tar.gz
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc       666 Nov 30 00:58 wqGLDmGglh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrhLKDmBtnMWn.diag
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc      8842 Nov 30 00:58 runtime_log.err
[2025-11-30 00:58:45] -rw-r--r--. 1 boinc boinc     21420 Nov 30 00:58 stderr.txt
[2025-11-30 00:58:45] HITS file was successfully produced:
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc 916783905 Nov 30 00:57 shared/HITS.pool.root.1
[2025-11-30 00:58:45]  *** Contents of shared directory: ***
[2025-11-30 00:58:45] total 1301964
[2025-11-30 00:58:45] -rw-r--r--. 2 boinc boinc 407334636 Nov 29 12:49 ATLAS.root_0
[2025-11-30 00:58:45] -rw-r--r--. 2 boinc boinc     15847 Nov 29 12:49 start_atlas.sh
[2025-11-30 00:58:45] -rw-r--r--. 2 boinc boinc    590099 Nov 29 12:49 input.tar.gz
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc 916783905 Nov 30 00:57 HITS.pool.root.1
[2025-11-30 00:58:45] -rw-------. 1 boinc boinc   8478720 Nov 30 00:58 result.tar.gz
00:58:47 (4172978): run_atlas exited; CPU time 507015.966284
00:58:47 (4172978): called boinc_finish(0)

</stderr_txt>
]]>

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