Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:03:28 (27234): wrapper (7.7.26015): starting
23:03:28 (27234): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 23:03:28] Arguments: --nthreads 8
[2025-11-28 23:03:28] Threads: 8
[2025-11-28 23:03:28] Checking for CVMFS
[2025-11-28 23:03:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 23:03:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 23:03:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 23:03:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 23:03:28] 2.11.2.0 7040 121498 144164 153428 3 82 18065126 18432000 1885 130560 0 88178198 99.975 5011575 31352 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 23:03:28] CVMFS is ok
[2025-11-28 23:03:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 23:03:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 23:03:28] Further information can be found at the LHC@home message board.
[2025-11-28 23:03:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 23:03:28] Checking for apptainer binary...
[2025-11-28 23:03:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 23:03:28] Running /usr/bin/apptainer --version
[2025-11-28 23:03:28] apptainer version 1.3.2-1.el7
[2025-11-28 23:03:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 23:03:29] c-206-7.aglt2.org
[2025-11-28 23:03:29] apptainer works
[2025-11-28 23:03:29] Set ATHENA_PROC_NUMBER=8
[2025-11-28 23:03:29] Set ATHENA_CORE_NUMBER=8
[2025-11-28 23:03:29] Starting ATLAS job with PandaID=6899597646
[2025-11-28 23:03:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 18:51:44]  *** The last 200 lines of the pilot log: ***
[2025-11-29 18:51:44] 2025-11-29 23:50:49,055 | INFO     | monitor loop #5095: job 0:6899597646 is in state 'finished'
[2025-11-29 18:51:44] 2025-11-29 23:50:49,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 18:51:44] 2025-11-29 23:50:49,101 | INFO     | time since job start (71229s) is within the limit (172800.0s)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,100 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-29 18:51:44] 2025-11-29 23:50:50,106 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2433.5
[2025-11-29 18:51:44] 2025-11-29 23:50:50,111 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6899597646/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,111 | INFO     | extracted standard info from prmon json
[2025-11-29 18:51:44] 2025-11-29 23:50:50,112 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 18:51:44] 2025-11-29 23:50:50,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 18:51:44] 2025-11-29 23:50:50,143 | INFO     | fitting pss+swap vs Time
[2025-11-29 18:51:44] 2025-11-29 23:50:50,144 | INFO     | sum of square deviations: 492823237700.59814
[2025-11-29 18:51:44] 2025-11-29 23:50:50,173 | INFO     | sum of deviations: 2334038769496.8174
[2025-11-29 18:51:44] 2025-11-29 23:50:50,174 | INFO     | mean x: 1764424609.6281064
[2025-11-29 18:51:44] 2025-11-29 23:50:50,174 | INFO     | mean y: 2869056.1885175663
[2025-11-29 18:51:44] 2025-11-29 23:50:50,174 | INFO     | intersect: -8353545840.03481
[2025-11-29 18:51:44] 2025-11-29 23:50:50,175 | INFO     | chi2: 4.722165155928376
[2025-11-29 18:51:44] 2025-11-29 23:50:50,176 | INFO     | sum of square deviations: 486516077886.11694
[2025-11-29 18:51:44] 2025-11-29 23:50:50,200 | INFO     | sum of deviations: 2639911341512.596
[2025-11-29 18:51:44] 2025-11-29 23:50:50,200 | INFO     | mean x: 1764424457.130809
[2025-11-29 18:51:44] 2025-11-29 23:50:50,200 | INFO     | mean y: 2876447.3184165233
[2025-11-29 18:51:44] 2025-11-29 23:50:50,200 | INFO     | intersect: -9571163029.157322
[2025-11-29 18:51:44] 2025-11-29 23:50:50,201 | INFO     | chi2: 2.5781597186131853
[2025-11-29 18:51:44] 2025-11-29 23:50:50,201 | INFO     | current chi2=2.5781597186131853 (change=45.40301676284086 %)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,203 | INFO     | sum of square deviations: 480262965596.61945
[2025-11-29 18:51:44] 2025-11-29 23:50:50,228 | INFO     | sum of deviations: 2717951105132.0312
[2025-11-29 18:51:44] 2025-11-29 23:50:50,228 | INFO     | mean x: 1764424304.633535
[2025-11-29 18:51:44] 2025-11-29 23:50:50,228 | INFO     | mean y: 2878348.8703543646
[2025-11-29 18:51:44] 2025-11-29 23:50:50,228 | INFO     | intersect: -9982524091.526121
[2025-11-29 18:51:44] 2025-11-29 23:50:50,229 | INFO     | chi2: 2.3481846520174954
[2025-11-29 18:51:44] 2025-11-29 23:50:50,229 | INFO     | current chi2=2.3481846520174954 (change=8.92012488347291 %)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,229 | INFO     | right removable region: 1156
[2025-11-29 18:51:44] 2025-11-29 23:50:50,230 | INFO     | sum of square deviations: 486515701699.3778
[2025-11-29 18:51:44] 2025-11-29 23:50:50,255 | INFO     | sum of deviations: 2033925662710.363
[2025-11-29 18:51:44] 2025-11-29 23:50:50,255 | INFO     | mean x: 1764424762.1299484
[2025-11-29 18:51:44] 2025-11-29 23:50:50,255 | INFO     | mean y: 2876304.0240963856
[2025-11-29 18:51:44] 2025-11-29 23:50:50,255 | INFO     | intersect: -7373471039.098703
[2025-11-29 18:51:44] 2025-11-29 23:50:50,256 | INFO     | chi2: 2.7094633649615742
[2025-11-29 18:51:44] 2025-11-29 23:50:50,256 | INFO     | current chi2=2.7094633649615742 (change=42.622435355527195 %)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,257 | INFO     | sum of square deviations: 480262425869.9323
[2025-11-29 18:51:44] 2025-11-29 23:50:50,281 | INFO     | sum of deviations: 1959697151436.3145
[2025-11-29 18:51:44] 2025-11-29 23:50:50,281 | INFO     | mean x: 1764424914.6292136
[2025-11-29 18:51:44] 2025-11-29 23:50:50,281 | INFO     | mean y: 2878113.8841832327
[2025-11-29 18:51:44] 2025-11-29 23:50:50,282 | INFO     | intersect: -7196807501.451835
[2025-11-29 18:51:44] 2025-11-29 23:50:50,283 | INFO     | chi2: 2.663085797677331
[2025-11-29 18:51:44] 2025-11-29 23:50:50,283 | INFO     | current chi2=2.663085797677331 (change=1.7116882953278452 %)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,283 | INFO     | left removable region: 20
[2025-11-29 18:51:44] 2025-11-29 23:50:50,284 | INFO     | sum of square deviations: 454584109254.1937
[2025-11-29 18:51:44] 2025-11-29 23:50:50,306 | INFO     | sum of deviations: 2249255677389.6045
[2025-11-29 18:51:44] 2025-11-29 23:50:50,307 | INFO     | mean x: 1764424884.1320422
[2025-11-29 18:51:44] 2025-11-29 23:50:50,307 | INFO     | mean y: 2890354.595950704
[2025-11-29 18:51:44] 2025-11-29 23:50:50,307 | INFO     | intersect: -8727381133.495838
[2025-11-29 18:51:44] 2025-11-29 23:50:50,308 | INFO     | chi2: 0.24260014795842832
[2025-11-29 18:51:44] 2025-11-29 23:50:50,308 | INFO     | current memory leak: 4.95 B/s (using 1136 data points, chi2=0.24)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,309 | INFO     | could have reported an average CPU frequency of 2632 MHz (42 samples)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,309 | INFO     | ..............................
[2025-11-29 18:51:44] 2025-11-29 23:50:50,309 | INFO     | . Timing measurements:
[2025-11-29 18:51:44] 2025-11-29 23:50:50,309 | INFO     | . get job = 0 s
[2025-11-29 18:51:44] 2025-11-29 23:50:50,309 | INFO     | . initial setup = 2 s
[2025-11-29 18:51:44] 2025-11-29 23:50:50,309 | INFO     | . payload setup = 5 s
[2025-11-29 18:51:44] 2025-11-29 23:50:50,309 | INFO     | . stage-in = 0 s
[2025-11-29 18:51:44] 2025-11-29 23:50:50,310 | INFO     | . payload execution = 71191 s
[2025-11-29 18:51:44] 2025-11-29 23:50:50,310 | INFO     | . stage-out = 4 s
[2025-11-29 18:51:44] 2025-11-29 23:50:50,310 | INFO     | . log creation = 0 s
[2025-11-29 18:51:44] 2025-11-29 23:50:50,310 | INFO     | ..............................
[2025-11-29 18:51:44] 2025-11-29 23:50:50,395 | INFO     | 
[2025-11-29 18:51:44] 2025-11-29 23:50:50,395 | INFO     | job summary report
[2025-11-29 18:51:44] 2025-11-29 23:50:50,395 | INFO     | --------------------------------------------------
[2025-11-29 18:51:44] 2025-11-29 23:50:50,395 | INFO     | PanDA job id: 6899597646
[2025-11-29 18:51:44] 2025-11-29 23:50:50,395 | INFO     | task id: 47556173
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | errors: (none)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | pilot state: finished 
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | transexitcode: 0
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | exeerrorcode: 0
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | exeerrordiag: 
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | exitcode: 0
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | exitmsg: OK
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | cpuconsumptiontime: 547580 s
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | nevents: 1000
[2025-11-29 18:51:44] 2025-11-29 23:50:50,396 | INFO     | neventsw: 0
[2025-11-29 18:51:44] 2025-11-29 23:50:50,397 | INFO     | pid: 5218
[2025-11-29 18:51:44] 2025-11-29 23:50:50,397 | INFO     | pgrp: 5218
[2025-11-29 18:51:44] 2025-11-29 23:50:50,397 | INFO     | corecount: 8
[2025-11-29 18:51:44] 2025-11-29 23:50:50,397 | INFO     | event service: False
[2025-11-29 18:51:44] 2025-11-29 23:50:50,397 | INFO     | sizes: {0: 2284145, 1: 2284344, 2: 2284344, 4: 2284634, 12: 2284662, 71199: 2341754, 71205: 2350748, 71208: 2350804, 71213: 2351050}
[2025-11-29 18:51:44] 2025-11-29 23:50:50,397 | INFO     | --------------------------------------------------
[2025-11-29 18:51:44] 2025-11-29 23:50:50,398 | INFO     | 
[2025-11-29 18:51:44] 2025-11-29 23:50:50,398 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-29 18:51:44] 2025-11-29 23:50:50,420 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,420 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,421 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,421 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,421 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,421 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,422 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,422 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 18:51:44] 2025-11-29 23:50:50,422 | INFO     | job 6899597646 has completed (purged errors)
[2025-11-29 18:51:44] 2025-11-29 23:50:50,422 | INFO     | overall cleanup function is called
[2025-11-29 18:51:44] 2025-11-29 23:50:51,435 | INFO     | --- collectZombieJob: --- 10, [5218]
[2025-11-29 18:51:44] 2025-11-29 23:50:51,435 | INFO     | zombie collector waiting for pid 5218
[2025-11-29 18:51:44] 2025-11-29 23:50:51,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 18:51:44] 2025-11-29 23:50:51,435 | INFO     | collected zombie processes
[2025-11-29 18:51:44] 2025-11-29 23:50:51,435 | INFO     | will attempt to kill all subprocesses of pid=5218
[2025-11-29 18:51:44] 2025-11-29 23:50:51,555 | INFO     | process IDs to be killed: [5218] (in reverse order)
[2025-11-29 18:51:44] 2025-11-29 23:50:51,602 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 18:51:44] 2025-11-29 23:50:51,602 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 18:51:44] 2025-11-29 23:50:51,605 | INFO     | did not find any defunct processes belonging to 5218
[2025-11-29 18:51:44] 2025-11-29 23:50:51,607 | INFO     | did not find any defunct processes belonging to 5218
[2025-11-29 18:51:44] 2025-11-29 23:50:51,608 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 18:51:44] 2025-11-29 23:50:51,608 | INFO     | ready for new job
[2025-11-29 18:51:44] 2025-11-29 23:50:51,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 18:51:44] 2025-11-29 23:50:51,612 | INFO     | ***************************************
[2025-11-29 18:51:44] 2025-11-29 23:50:51,612 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 18:51:44] 2025-11-29 23:50:51,612 | INFO     | ***************************************
[2025-11-29 18:51:44] 2025-11-29 23:50:51,612 | INFO     | 
[2025-11-29 18:51:44] 2025-11-29 23:50:51,613 | INFO     | architecture information:
[2025-11-29 18:51:44] 2025-11-29 23:50:51,614 | INFO     | executing command: cat /etc/os-release
[2025-11-29 18:51:44] 2025-11-29 23:50:51,627 | INFO     | cat /etc/os-release:
[2025-11-29 18:51:44] NAME="CentOS Linux"
[2025-11-29 18:51:44] VERSION="7 (Core)"
[2025-11-29 18:51:44] ID="centos"
[2025-11-29 18:51:44] ID_LIKE="rhel fedora"
[2025-11-29 18:51:44] VERSION_ID="7"
[2025-11-29 18:51:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 18:51:44] ANSI_COLOR="0;31"
[2025-11-29 18:51:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 18:51:44] HOME_URL="https://www.centos.org/"
[2025-11-29 18:51:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 18:51:44] 
[2025-11-29 18:51:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 18:51:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 18:51:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 18:51:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 18:51:44] 
[2025-11-29 18:51:44] 2025-11-29 23:50:51,627 | INFO     | ***************************************
[2025-11-29 18:51:44] 2025-11-29 23:50:52,130 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-29 18:51:44] 2025-11-29 23:50:52,159 | INFO     | sufficient remaining disk space (24894242816 B)
[2025-11-29 18:51:44] 2025-11-29 23:50:52,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 18:51:44] 2025-11-29 23:50:52,178 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 18:51:44] 2025-11-29 23:50:52,178 | INFO     | update_server=False
[2025-11-29 18:51:44] 2025-11-29 23:50:52,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 18:51:44] 2025-11-29 23:50:52,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 18:51:44] 2025-11-29 23:50:52,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 18:51:44] 2025-11-29 23:50:52,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 18:51:44] 2025-11-29 23:50:52,563 | INFO     | aborting loop
[2025-11-29 18:51:44] 2025-11-29 23:50:52,679 | INFO     | all payload control threads have been joined
[2025-11-29 18:51:44] 2025-11-29 23:50:52,708 | INFO     | all data control threads have been joined
[2025-11-29 18:51:44] 2025-11-29 23:50:53,024 | INFO     | all job control threads have been joined
[2025-11-29 18:51:44] 2025-11-29 23:50:53,184 | INFO     | [job] retrieve thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:53,184 | INFO     | [job] queue monitor thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:53,416 | INFO     | [payload] validate_post thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:53,569 | INFO     | [job] job monitor thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:53,685 | INFO     | [payload] control thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:53,714 | INFO     | [data] control thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:53,764 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:53,988 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:54,030 | INFO     | [job] control thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:54,204 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:54,220 | INFO     | [data] copytool_out thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:54,415 | INFO     | [data] copytool_in thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:54,416 | INFO     | [job] validate thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:54,524 | INFO     | [payload] failed_post thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:54,593 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:50:55,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 18:51:44] 2025-11-29 23:50:59,237 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 18:51:44] 2025-11-29 23:51:22,369 | INFO     | PID=30946 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 18:51:44] 2025-11-29 23:51:22,369 | INFO     | .. there are 3 such processes running
[2025-11-29 18:51:44] 2025-11-29 23:51:22,370 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 18:51:44] 2025-11-29 23:51:22,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 18:51:44] 2025-11-29 23:51:22,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 18:51:44] 2025-11-29 23:51:38,430 | INFO     | [monitor] cgroup control has ended
[2025-11-29 18:51:44] 2025-11-29 23:51:39,484 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993422702400)>', '<ExcThread(monitor, started 139993195714304)>']
[2025-11-29 18:51:44] 2025-11-29 23:51:40,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 18:51:44] 2025-11-29 23:51:40,458 | INFO     | [monitor] control thread has ended
[2025-11-29 18:51:44] 2025-11-29 23:51:44,509 | INFO     | all workflow threads have been joined
[2025-11-29 18:51:44] 2025-11-29 23:51:44,509 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 18:51:44] 2025-11-29 23:51:44,509 | INFO     | traces error code: 0
[2025-11-29 18:51:44] 2025-11-29 23:51:44,510 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 18:51:44] 2025-11-29 23:51:44,629 [wrapper] ==== pilot stdout END ====
[2025-11-29 18:51:44] 2025-11-29 23:51:44,631 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 18:51:44] 2025-11-29 23:51:44,633 [wrapper] pilotpid: 30946
[2025-11-29 18:51:44] 2025-11-29 23:51:44,634 [wrapper] Pilot exit status: 0
[2025-11-29 18:51:44] 2025-11-29 23:51:44,642 [wrapper] pandaids: 6899597646
[2025-11-29 18:51:44] 2025-11-29 23:51:44,670 [wrapper] cleanup supervisor_pilot 29282 30947
[2025-11-29 18:51:44] 2025-11-29 23:51:44,672 [wrapper] Test setup, not cleaning
[2025-11-29 18:51:44] 2025-11-29 23:51:44,674 [wrapper] apfmon messages muted
[2025-11-29 18:51:44] 2025-11-29 23:51:44,676 [wrapper] ==== wrapper stdout END ====
[2025-11-29 18:51:44] 2025-11-29 23:51:44,678 [wrapper] ==== wrapper stderr END ====
[2025-11-29 18:51:44]  *** Error codes and diagnostics ***
[2025-11-29 18:51:44]     "exeErrorCode": 0,
[2025-11-29 18:51:44]     "exeErrorDiag": "",
[2025-11-29 18:51:44]     "pilotErrorCode": 0,
[2025-11-29 18:51:44]     "pilotErrorDiag": "",
[2025-11-29 18:51:44]  *** Listing of results directory ***
[2025-11-29 18:51:44] total 1327544
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas    576529 Nov 27 03:46 pilot3.tar.gz
[2025-11-29 18:51:44] -rwx------ 1 boincer umatlas     36292 Nov 27 03:49 runpilot2-wrapper.sh
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas      5112 Nov 27 03:53 queuedata.json
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas       100 Nov 28 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 18:51:44] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 23:03 run_atlas
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas       105 Nov 28 23:03 job.xml
[2025-11-29 18:51:44] -rw-r--r-- 2 boincer umatlas 411395287 Nov 28 23:03 EVNT.47483658._003417.pool.root.1
[2025-11-29 18:51:44] drwxrwx--x 2 boincer umatlas      4096 Nov 28 23:03 shared
[2025-11-29 18:51:44] -rw-r--r-- 2 boincer umatlas    590108 Nov 28 23:03 input.tar.gz
[2025-11-29 18:51:44] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 23:03 start_atlas.sh
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas         0 Nov 28 23:03 boinc_lockfile
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas      2787 Nov 28 23:03 pandaJob.out
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas        57 Nov 28 23:03 setup.sh.local
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas    991834 Nov 28 23:03 agis_schedconf.cvmfs.json
[2025-11-29 18:51:44] drwx------ 5 boincer umatlas      4096 Nov 28 23:03 pilot3
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas       533 Nov 29 18:38 boinc_task_state.xml
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas      5952 Nov 29 18:49 init_data.xml
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas 919759406 Nov 29 18:50 HITS.47556173._003736.pool.root.1
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas      1068 Nov 29 18:50 memory_monitor_summary.json
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas   1516240 Nov 29 18:50 agis_ddmendpoints.agis.ALL.json
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas   2327253 Nov 29 18:50 log.47556173._003736.job.log.tgz.1
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas      8663 Nov 29 18:50 heartbeat.json
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas        95 Nov 29 18:51 pilot_heartbeat.json
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas        29 Nov 29 18:51 wrapper_checkpoint.txt
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas      8192 Nov 29 18:51 boinc_mmap_file
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas      4821 Nov 29 18:51 pilotlog.txt
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas   9834637 Nov 29 18:51 log.47556173._003736.job.log.1
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas       353 Nov 29 18:51 output.list
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas       620 Nov 29 18:51 runtime_log
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas  12185600 Nov 29 18:51 result.tar.gz
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas      9338 Nov 29 18:51 runtime_log.err
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas       667 Nov 29 18:51 nabLDmJsmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7hKKDmDDwRsn.diag
[2025-11-29 18:51:44] -rw-r--r-- 1 boincer umatlas     21303 Nov 29 18:51 stderr.txt
[2025-11-29 18:51:44] HITS file was successfully produced:
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas 919759406 Nov 29 18:50 shared/HITS.pool.root.1
[2025-11-29 18:51:44]  *** Contents of shared directory: ***
[2025-11-29 18:51:44] total 1312460
[2025-11-29 18:51:44] -rw-r--r-- 2 boincer umatlas 411395287 Nov 28 23:03 ATLAS.root_0
[2025-11-29 18:51:44] -rw-r--r-- 2 boincer umatlas    590108 Nov 28 23:03 input.tar.gz
[2025-11-29 18:51:44] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 23:03 start_atlas.sh
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas 919759406 Nov 29 18:50 HITS.pool.root.1
[2025-11-29 18:51:44] -rw------- 1 boincer umatlas  12185600 Nov 29 18:51 result.tar.gz
18:51:46 (27234): run_atlas exited; CPU time 546202.069302
18:51:46 (27234): called boinc_finish(0)

</stderr_txt>
]]>

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