Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:05:47 (1281): wrapper (7.7.26015): starting
22:05:47 (1281): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 22:05:47] Arguments: --nthreads 8
[2025-11-28 22:05:47] Threads: 8
[2025-11-28 22:05:47] Checking for CVMFS
[2025-11-28 22:05:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 22:05:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 22:05:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 22:05:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 22:05:47] 2.11.2.0 2880 157155 86028 153427 2 58 15986357 20275201 1 130560 0 61179965 99.975 5572450 22376 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 22:05:47] CVMFS is ok
[2025-11-28 22:05:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 22:05:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 22:05:47] Further information can be found at the LHC@home message board.
[2025-11-28 22:05:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 22:05:47] Checking for apptainer binary...
[2025-11-28 22:05:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 22:05:47] Running /usr/bin/apptainer --version
[2025-11-28 22:05:47] apptainer version 1.3.2-1.el7
[2025-11-28 22:05:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 22:05:49] c-115-10.aglt2.org
[2025-11-28 22:05:49] apptainer works
[2025-11-28 22:05:49] Set ATHENA_PROC_NUMBER=8
[2025-11-28 22:05:49] Set ATHENA_CORE_NUMBER=8
[2025-11-28 22:05:49] Starting ATLAS job with PandaID=6898175079
[2025-11-28 22:05:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 09:26:38]  *** The last 200 lines of the pilot log: ***
[2025-11-29 09:26:38] 2025-11-29 14:26:03,056 | INFO     | time since job start (40797s) is within the limit (172800.0s)
[2025-11-29 09:26:38] 2025-11-29 14:26:03,459 | INFO     | monitor loop #2977: job 0:6898175079 is in state 'finished'
[2025-11-29 09:26:38] 2025-11-29 14:26:03,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,059 | INFO     | time since job start (40799s) is within the limit (172800.0s)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,371 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-29 09:26:38] 2025-11-29 14:26:05,373 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-29 09:26:38] 2025-11-29 14:26:05,375 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898175079/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,375 | INFO     | extracted standard info from prmon json
[2025-11-29 09:26:38] 2025-11-29 14:26:05,375 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 09:26:38] 2025-11-29 14:26:05,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 09:26:38] 2025-11-29 14:26:05,386 | INFO     | fitting pss+swap vs Time
[2025-11-29 09:26:38] 2025-11-29 14:26:05,387 | INFO     | sum of square deviations: 92845245718.45146
[2025-11-29 09:26:38] 2025-11-29 14:26:05,395 | INFO     | sum of deviations: 669097668347.6995
[2025-11-29 09:26:38] 2025-11-29 14:26:05,395 | INFO     | mean x: 1764405972.6487296
[2025-11-29 09:26:38] 2025-11-29 14:26:05,395 | INFO     | mean y: 3304336.0582959643
[2025-11-29 09:26:38] 2025-11-29 14:26:05,396 | INFO     | intersect: -12712047033.66082
[2025-11-29 09:26:38] 2025-11-29 14:26:05,396 | INFO     | chi2: 6.073318286167749
[2025-11-29 09:26:38] 2025-11-29 14:26:05,397 | INFO     | sum of square deviations: 90779181206.33125
[2025-11-29 09:26:38] 2025-11-29 14:26:05,406 | INFO     | sum of deviations: 924159129522.5118
[2025-11-29 09:26:38] 2025-11-29 14:26:05,406 | INFO     | mean x: 1764405820.1536145
[2025-11-29 09:26:38] 2025-11-29 14:26:05,406 | INFO     | mean y: 3323150.328313253
[2025-11-29 09:26:38] 2025-11-29 14:26:05,406 | INFO     | intersect: -17958854137.56173
[2025-11-29 09:26:38] 2025-11-29 14:26:05,407 | INFO     | chi2: 2.9213940132702345
[2025-11-29 09:26:38] 2025-11-29 14:26:05,407 | INFO     | current chi2=2.9213940132702345 (change=51.89789377705036 %)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,408 | INFO     | sum of square deviations: 88744000994.17902
[2025-11-29 09:26:38] 2025-11-29 14:26:05,416 | INFO     | sum of deviations: 1005745023778.677
[2025-11-29 09:26:38] 2025-11-29 14:26:05,416 | INFO     | mean x: 1764405667.6585736
[2025-11-29 09:26:38] 2025-11-29 14:26:05,416 | INFO     | mean y: 3329248.314112291
[2025-11-29 09:26:38] 2025-11-29 14:26:05,416 | INFO     | intersect: -19992864300.485905
[2025-11-29 09:26:38] 2025-11-29 14:26:05,417 | INFO     | chi2: 2.4128577637441744
[2025-11-29 09:26:38] 2025-11-29 14:26:05,417 | INFO     | current chi2=2.4128577637441744 (change=17.40731470031323 %)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,417 | INFO     | right removable region: 658
[2025-11-29 09:26:38] 2025-11-29 14:26:05,418 | INFO     | sum of square deviations: 90778916466.33116
[2025-11-29 09:26:38] 2025-11-29 14:26:05,426 | INFO     | sum of deviations: 461442711344.74066
[2025-11-29 09:26:38] 2025-11-29 14:26:05,426 | INFO     | mean x: 1764406125.1536145
[2025-11-29 09:26:38] 2025-11-29 14:26:05,427 | INFO     | mean y: 3319631.31626506
[2025-11-29 09:26:38] 2025-11-29 14:26:05,427 | INFO     | intersect: -8965418683.665922
[2025-11-29 09:26:38] 2025-11-29 14:26:05,427 | INFO     | chi2: 3.822262497807444
[2025-11-29 09:26:38] 2025-11-29 14:26:05,428 | INFO     | current chi2=3.822262497807444 (change=37.06467671037732 %)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,428 | INFO     | sum of square deviations: 88743552400.80727
[2025-11-29 09:26:38] 2025-11-29 14:26:05,436 | INFO     | sum of deviations: 424875299591.7816
[2025-11-29 09:26:38] 2025-11-29 14:26:05,437 | INFO     | mean x: 1764406277.6555388
[2025-11-29 09:26:38] 2025-11-29 14:26:05,437 | INFO     | mean y: 3322369.33383915
[2025-11-29 09:26:38] 2025-11-29 14:26:05,437 | INFO     | intersect: -8444081701.609098
[2025-11-29 09:26:38] 2025-11-29 14:26:05,437 | INFO     | chi2: 3.7960382793586254
[2025-11-29 09:26:38] 2025-11-29 14:26:05,438 | INFO     | current chi2=3.7960382793586254 (change=0.6860915089913776 %)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,438 | INFO     | left removable region: 20
[2025-11-29 09:26:38] 2025-11-29 14:26:05,438 | INFO     | sum of square deviations: 80527392883.71733
[2025-11-29 09:26:38] 2025-11-29 14:26:05,446 | INFO     | sum of deviations: 688391943708.5424
[2025-11-29 09:26:38] 2025-11-29 14:26:05,446 | INFO     | mean x: 1764406247.169279
[2025-11-29 09:26:38] 2025-11-29 14:26:05,446 | INFO     | mean y: 3353239.3746081507
[2025-11-29 09:26:38] 2025-11-29 14:26:05,446 | INFO     | intersect: -15079750813.605953
[2025-11-29 09:26:38] 2025-11-29 14:26:05,447 | INFO     | chi2: 0.07314686410362449
[2025-11-29 09:26:38] 2025-11-29 14:26:05,447 | INFO     | current memory leak: 8.55 B/s (using 638 data points, chi2=0.07)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,448 | INFO     | could have reported an average CPU frequency of 2384 MHz (26 samples)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,448 | INFO     | ..............................
[2025-11-29 09:26:38] 2025-11-29 14:26:05,448 | INFO     | . Timing measurements:
[2025-11-29 09:26:38] 2025-11-29 14:26:05,448 | INFO     | . get job = 0 s
[2025-11-29 09:26:38] 2025-11-29 14:26:05,449 | INFO     | . initial setup = 2 s
[2025-11-29 09:26:38] 2025-11-29 14:26:05,449 | INFO     | . payload setup = 8 s
[2025-11-29 09:26:38] 2025-11-29 14:26:05,449 | INFO     | . stage-in = 0 s
[2025-11-29 09:26:38] 2025-11-29 14:26:05,449 | INFO     | . payload execution = 40756 s
[2025-11-29 09:26:38] 2025-11-29 14:26:05,449 | INFO     | . stage-out = 3 s
[2025-11-29 09:26:38] 2025-11-29 14:26:05,449 | INFO     | . log creation = 0 s
[2025-11-29 09:26:38] 2025-11-29 14:26:05,449 | INFO     | ..............................
[2025-11-29 09:26:38] 2025-11-29 14:26:05,795 | INFO     | 
[2025-11-29 09:26:38] 2025-11-29 14:26:05,795 | INFO     | job summary report
[2025-11-29 09:26:38] 2025-11-29 14:26:05,795 | INFO     | --------------------------------------------------
[2025-11-29 09:26:38] 2025-11-29 14:26:05,795 | INFO     | PanDA job id: 6898175079
[2025-11-29 09:26:38] 2025-11-29 14:26:05,796 | INFO     | task id: 47556161
[2025-11-29 09:26:38] 2025-11-29 14:26:05,796 | INFO     | errors: (none)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 09:26:38] 2025-11-29 14:26:05,796 | INFO     | pilot state: finished 
[2025-11-29 09:26:38] 2025-11-29 14:26:05,796 | INFO     | transexitcode: 0
[2025-11-29 09:26:38] 2025-11-29 14:26:05,796 | INFO     | exeerrorcode: 0
[2025-11-29 09:26:38] 2025-11-29 14:26:05,797 | INFO     | exeerrordiag: 
[2025-11-29 09:26:38] 2025-11-29 14:26:05,797 | INFO     | exitcode: 0
[2025-11-29 09:26:38] 2025-11-29 14:26:05,797 | INFO     | exitmsg: OK
[2025-11-29 09:26:38] 2025-11-29 14:26:05,797 | INFO     | cpuconsumptiontime: 317915 s
[2025-11-29 09:26:38] 2025-11-29 14:26:05,797 | INFO     | nevents: 1000
[2025-11-29 09:26:38] 2025-11-29 14:26:05,797 | INFO     | neventsw: 0
[2025-11-29 09:26:38] 2025-11-29 14:26:05,798 | INFO     | pid: 11608
[2025-11-29 09:26:38] 2025-11-29 14:26:05,798 | INFO     | pgrp: 11608
[2025-11-29 09:26:38] 2025-11-29 14:26:05,798 | INFO     | corecount: 8
[2025-11-29 09:26:38] 2025-11-29 14:26:05,798 | INFO     | event service: False
[2025-11-29 09:26:38] 2025-11-29 14:26:05,798 | INFO     | sizes: {0: 2284258, 6: 2284520, 11: 2284548, 40768: 2328391, 40773: 2337385, 40775: 2337441, 40782: 2337815}
[2025-11-29 09:26:38] 2025-11-29 14:26:05,799 | INFO     | --------------------------------------------------
[2025-11-29 09:26:38] 2025-11-29 14:26:05,799 | INFO     | 
[2025-11-29 09:26:38] 2025-11-29 14:26:05,799 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-29 09:26:38] 2025-11-29 14:26:05,828 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,829 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,829 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,829 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,830 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,830 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,830 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,830 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,830 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,830 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,831 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,831 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,831 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,831 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,831 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,832 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,832 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,832 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,832 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 09:26:38] 2025-11-29 14:26:05,832 | INFO     | job 6898175079 has completed (purged errors)
[2025-11-29 09:26:38] 2025-11-29 14:26:05,833 | INFO     | overall cleanup function is called
[2025-11-29 09:26:38] 2025-11-29 14:26:06,848 | INFO     | --- collectZombieJob: --- 10, [11608]
[2025-11-29 09:26:38] 2025-11-29 14:26:06,848 | INFO     | zombie collector waiting for pid 11608
[2025-11-29 09:26:38] 2025-11-29 14:26:06,848 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 09:26:38] 2025-11-29 14:26:06,849 | INFO     | collected zombie processes
[2025-11-29 09:26:38] 2025-11-29 14:26:06,849 | INFO     | will attempt to kill all subprocesses of pid=11608
[2025-11-29 09:26:38] 2025-11-29 14:26:06,933 | INFO     | process IDs to be killed: [11608] (in reverse order)
[2025-11-29 09:26:38] 2025-11-29 14:26:06,988 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 09:26:38] 2025-11-29 14:26:06,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 09:26:38] 2025-11-29 14:26:06,993 | INFO     | did not find any defunct processes belonging to 11608
[2025-11-29 09:26:38] 2025-11-29 14:26:06,997 | INFO     | did not find any defunct processes belonging to 11608
[2025-11-29 09:26:38] 2025-11-29 14:26:07,000 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 09:26:38] 2025-11-29 14:26:07,000 | INFO     | ready for new job
[2025-11-29 09:26:38] 2025-11-29 14:26:07,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 09:26:38] 2025-11-29 14:26:07,003 | INFO     | ***************************************
[2025-11-29 09:26:38] 2025-11-29 14:26:07,003 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 09:26:38] 2025-11-29 14:26:07,003 | INFO     | ***************************************
[2025-11-29 09:26:38] 2025-11-29 14:26:07,003 | INFO     | 
[2025-11-29 09:26:38] 2025-11-29 14:26:07,004 | INFO     | architecture information:
[2025-11-29 09:26:38] 2025-11-29 14:26:07,004 | INFO     | executing command: cat /etc/os-release
[2025-11-29 09:26:38] 2025-11-29 14:26:07,022 | INFO     | cat /etc/os-release:
[2025-11-29 09:26:38] NAME="CentOS Linux"
[2025-11-29 09:26:38] VERSION="7 (Core)"
[2025-11-29 09:26:38] ID="centos"
[2025-11-29 09:26:38] ID_LIKE="rhel fedora"
[2025-11-29 09:26:38] VERSION_ID="7"
[2025-11-29 09:26:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 09:26:38] ANSI_COLOR="0;31"
[2025-11-29 09:26:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 09:26:38] HOME_URL="https://www.centos.org/"
[2025-11-29 09:26:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 09:26:38] 
[2025-11-29 09:26:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 09:26:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 09:26:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 09:26:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 09:26:38] 
[2025-11-29 09:26:38] 2025-11-29 14:26:07,023 | INFO     | ***************************************
[2025-11-29 09:26:38] 2025-11-29 14:26:07,526 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-29 09:26:38] 2025-11-29 14:26:07,548 | INFO     | sufficient remaining disk space (17448304640 B)
[2025-11-29 09:26:38] 2025-11-29 14:26:07,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 09:26:38] 2025-11-29 14:26:07,549 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 09:26:38] 2025-11-29 14:26:07,549 | INFO     | update_server=False
[2025-11-29 09:26:38] 2025-11-29 14:26:07,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 09:26:38] 2025-11-29 14:26:07,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 09:26:38] 2025-11-29 14:26:07,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 09:26:38] 2025-11-29 14:26:07,550 | INFO     | aborting loop
[2025-11-29 09:26:38] 2025-11-29 14:26:07,627 | INFO     | all data control threads have been joined
[2025-11-29 09:26:38] 2025-11-29 14:26:08,523 | INFO     | all job control threads have been joined
[2025-11-29 09:26:38] 2025-11-29 14:26:08,550 | INFO     | [job] retrieve thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:08,556 | INFO     | [job] job monitor thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:08,565 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:08,633 | INFO     | [data] control thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:08,732 | INFO     | all payload control threads have been joined
[2025-11-29 09:26:38] 2025-11-29 14:26:09,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 09:26:38] 2025-11-29 14:26:09,294 | INFO     | [payload] validate_post thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:09,476 | INFO     | [data] copytool_in thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:09,528 | INFO     | [job] control thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:09,556 | INFO     | [data] copytool_out thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:09,562 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:09,570 | INFO     | [job] validate thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:09,618 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:09,738 | INFO     | [payload] control thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:09,743 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:09,971 | INFO     | [payload] failed_post thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:10,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 09:26:38] 2025-11-29 14:26:11,542 | INFO     | [job] queue monitor thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:13,203 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 09:26:38] 2025-11-29 14:26:13,739 | INFO     | [monitor] cgroup control has ended
[2025-11-29 09:26:38] 2025-11-29 14:26:14,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068538902336)>', '<ExcThread(monitor, started 140067758642944)>']
[2025-11-29 09:26:38] 2025-11-29 14:26:19,034 | INFO     | all workflow threads have been joined
[2025-11-29 09:26:38] 2025-11-29 14:26:19,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 09:26:38] 2025-11-29 14:26:19,034 | INFO     | traces error code: 0
[2025-11-29 09:26:38] 2025-11-29 14:26:19,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 09:26:38] 2025-11-29 14:26:38,256 | INFO     | PID=5099 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-29 09:26:38] 2025-11-29 14:26:38,257 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 09:26:38] 2025-11-29 14:26:38,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 09:26:38] 2025-11-29 14:26:38,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 09:26:38] 2025-11-29 14:26:38,257 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 09:26:38] 2025-11-29 14:26:38,257 | INFO     | [monitor] control thread has ended
[2025-11-29 09:26:38] 2025-11-29 14:26:38,354 [wrapper] ==== pilot stdout END ====
[2025-11-29 09:26:38] 2025-11-29 14:26:38,359 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 09:26:38] 2025-11-29 14:26:38,363 [wrapper] pilotpid: 5099
[2025-11-29 09:26:38] 2025-11-29 14:26:38,368 [wrapper] Pilot exit status: 0
[2025-11-29 09:26:38] 2025-11-29 14:26:38,387 [wrapper] pandaids: 6898175079
[2025-11-29 09:26:38] 2025-11-29 14:26:38,427 [wrapper] cleanup supervisor_pilot 11220 5100
[2025-11-29 09:26:38] 2025-11-29 14:26:38,432 [wrapper] Test setup, not cleaning
[2025-11-29 09:26:38] 2025-11-29 14:26:38,437 [wrapper] apfmon messages muted
[2025-11-29 09:26:38] 2025-11-29 14:26:38,442 [wrapper] ==== wrapper stdout END ====
[2025-11-29 09:26:38] 2025-11-29 14:26:38,446 [wrapper] ==== wrapper stderr END ====
[2025-11-29 09:26:38]  *** Error codes and diagnostics ***
[2025-11-29 09:26:38]     "exeErrorCode": 0,
[2025-11-29 09:26:38]     "exeErrorDiag": "",
[2025-11-29 09:26:38]     "pilotErrorCode": 0,
[2025-11-29 09:26:38]     "pilotErrorDiag": "",
[2025-11-29 09:26:38]  *** Listing of results directory ***
[2025-11-29 09:26:38] total 1334300
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 22:46 queuedata.json
[2025-11-29 09:26:38] -rwx------ 1 boincer umatlas     36292 Nov 25 22:47 runpilot2-wrapper.sh
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas       100 Nov 28 22:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 09:26:38] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 22:05 run_atlas
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas       105 Nov 28 22:05 job.xml
[2025-11-29 09:26:38] -rw-r--r-- 2 boincer umatlas 412044346 Nov 28 22:05 EVNT.47483658._002455.pool.root.1
[2025-11-29 09:26:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 22:05 start_atlas.sh
[2025-11-29 09:26:38] drwxrwx--x 2 boincer umatlas      4096 Nov 28 22:05 shared
[2025-11-29 09:26:38] -rw-r--r-- 2 boincer umatlas    590100 Nov 28 22:05 input.tar.gz
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas         0 Nov 28 22:05 boinc_lockfile
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas      2782 Nov 28 22:05 pandaJob.out
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas        57 Nov 28 22:05 setup.sh.local
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas    991834 Nov 28 22:06 agis_schedconf.cvmfs.json
[2025-11-29 09:26:38] drwx------ 5 boincer umatlas      4096 Nov 28 22:06 pilot3
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas       533 Nov 29 09:15 boinc_task_state.xml
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas      5913 Nov 29 09:21 init_data.xml
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas 935262764 Nov 29 09:25 HITS.47556161._004371.pool.root.1
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas        95 Nov 29 09:25 pilot_heartbeat.json
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas      1064 Nov 29 09:25 memory_monitor_summary.json
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas   1516240 Nov 29 09:25 agis_ddmendpoints.agis.ALL.json
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas   1927793 Nov 29 09:25 log.47556161._004371.job.log.tgz.1
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas      8670 Nov 29 09:26 heartbeat.json
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas        29 Nov 29 09:26 wrapper_checkpoint.txt
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas      8192 Nov 29 09:26 boinc_mmap_file
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas       744 Nov 29 09:26 pilotlog.txt
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas   5620373 Nov 29 09:26 log.47556161._004371.job.log.1
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas       353 Nov 29 09:26 output.list
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas       620 Nov 29 09:26 runtime_log
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas   7567360 Nov 29 09:26 result.tar.gz
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas      9343 Nov 29 09:26 runtime_log.err
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas       667 Nov 29 09:26 i1JKDmsfLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdrMKDm5ZRudm.diag
[2025-11-29 09:26:38] -rw-r--r-- 1 boincer umatlas     21293 Nov 29 09:26 stderr.txt
[2025-11-29 09:26:38] HITS file was successfully produced:
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas 935262764 Nov 29 09:25 shared/HITS.pool.root.1
[2025-11-29 09:26:38]  *** Contents of shared directory: ***
[2025-11-29 09:26:38] total 1323728
[2025-11-29 09:26:38] -rw-r--r-- 2 boincer umatlas 412044346 Nov 28 22:05 ATLAS.root_0
[2025-11-29 09:26:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 22:05 start_atlas.sh
[2025-11-29 09:26:38] -rw-r--r-- 2 boincer umatlas    590100 Nov 28 22:05 input.tar.gz
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas 935262764 Nov 29 09:25 HITS.pool.root.1
[2025-11-29 09:26:38] -rw------- 1 boincer umatlas   7567360 Nov 29 09:26 result.tar.gz
09:26:40 (1281): run_atlas exited; CPU time 316202.623571
09:26:40 (1281): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN