Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:47:52 (6400): wrapper (7.7.26015): starting
02:47:52 (6400): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 02:47:52] Arguments: --nthreads 8
[2025-12-01 02:47:52] Threads: 8
[2025-12-01 02:47:52] Checking for CVMFS
[2025-12-01 02:47:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 02:47:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 02:47:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 02:47:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 02:47:55] 2.11.2.0 24289 291762 139792 153500 3 85 22455550 25165825 2554 130560 11 142919122 99.884 74375115 2879 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-01 02:47:55] CVMFS is ok
[2025-12-01 02:47:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 02:47:55] Checking for apptainer binary...
[2025-12-01 02:47:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 02:47:55] Running /usr/bin/apptainer --version
[2025-12-01 02:47:55] apptainer version 1.3.2-1.el7
[2025-12-01 02:47:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 02:48:11] cg-vwn388.simple-grid.lan
[2025-12-01 02:48:11] apptainer works
[2025-12-01 02:48:11] Set ATHENA_PROC_NUMBER=8
[2025-12-01 02:48:11] Set ATHENA_CORE_NUMBER=8
[2025-12-01 02:48:11] Starting ATLAS job with PandaID=6899497941
[2025-12-01 02:48:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 02:14:40]  *** The last 200 lines of the pilot log: ***
[2025-12-02 02:14:40] 2025-12-02 01:13:51,679 | INFO     | time since job start (84108s) is within the limit (172800.0s)
[2025-12-02 02:14:40] 2025-12-02 01:13:51,680 | INFO     | 84113s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-02 02:14:40] 2025-12-02 01:13:52,163 | INFO     | monitor loop #5613: job 0:6899497941 is in state 'finished'
[2025-12-02 02:14:40] 2025-12-02 01:13:52,163 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 02:14:40] 2025-12-02 01:13:53,691 | INFO     | time since job start (84110s) is within the limit (172800.0s)
[2025-12-02 02:14:40] 2025-12-02 01:13:54,675 | INFO     | monitor loop #5614: job 0:6899497941 is in state 'finished'
[2025-12-02 02:14:40] 2025-12-02 01:13:54,675 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 02:14:40] 2025-12-02 01:13:55,703 | INFO     | time since job start (84112s) is within the limit (172800.0s)
[2025-12-02 02:14:40] 2025-12-02 01:13:57,180 | INFO     | monitor loop #5615: job 0:6899497941 is in state 'finished'
[2025-12-02 02:14:40] 2025-12-02 01:13:57,180 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 02:14:40] 2025-12-02 01:13:57,710 | INFO     | time since job start (84114s) is within the limit (172800.0s)
[2025-12-02 02:14:40] 2025-12-02 01:13:59,688 | INFO     | monitor loop #5616: job 0:6899497941 is in state 'finished'
[2025-12-02 02:14:40] 2025-12-02 01:13:59,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 02:14:40] 2025-12-02 01:13:59,720 | INFO     | time since job start (84116s) is within the limit (172800.0s)
[2025-12-02 02:14:40] 2025-12-02 01:14:00,046 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 02:14:40] 2025-12-02 01:14:00,047 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-02 02:14:40] 2025-12-02 01:14:00,049 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6899497941/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 02:14:40] 2025-12-02 01:14:00,049 | INFO     | extracted standard info from prmon json
[2025-12-02 02:14:40] 2025-12-02 01:14:00,050 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 02:14:40] 2025-12-02 01:14:00,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 02:14:40] 2025-12-02 01:14:00,075 | INFO     | fitting pss+swap vs Time
[2025-12-02 02:14:40] 2025-12-02 01:14:00,077 | INFO     | sum of square deviations: 797332331444.9988
[2025-12-02 02:14:40] 2025-12-02 01:14:00,132 | INFO     | sum of deviations: 3331978003079.4854
[2025-12-02 02:14:40] 2025-12-02 01:14:00,133 | INFO     | mean x: 1764596135.59927
[2025-12-02 02:14:40] 2025-12-02 01:14:00,133 | INFO     | mean y: 2839004.691240876
[2025-12-02 02:14:40] 2025-12-02 01:14:00,133 | INFO     | intersect: -7371244895.155502
[2025-12-02 02:14:40] 2025-12-02 01:14:00,135 | INFO     | chi2: 22.42700605342309
[2025-12-02 02:14:40] 2025-12-02 01:14:00,137 | INFO     | sum of square deviations: 788634683496.4353
[2025-12-02 02:14:40] 2025-12-02 01:14:00,195 | INFO     | sum of deviations: 3791019783378.7876
[2025-12-02 02:14:40] 2025-12-02 01:14:00,195 | INFO     | mean x: 1764595983.1032968
[2025-12-02 02:14:40] 2025-12-02 01:14:00,195 | INFO     | mean y: 2847052.6256410256
[2025-12-02 02:14:40] 2025-12-02 01:14:00,195 | INFO     | intersect: -8479684113.714543
[2025-12-02 02:14:40] 2025-12-02 01:14:00,197 | INFO     | chi2: 19.145751318071124
[2025-12-02 02:14:40] 2025-12-02 01:14:00,197 | INFO     | current chi2=19.145751318071124 (change=14.630819323523298 %)
[2025-12-02 02:14:40] 2025-12-02 01:14:00,197 | INFO     | right removable region: 1364
[2025-12-02 02:14:40] 2025-12-02 01:14:00,199 | INFO     | sum of square deviations: 788633764836.435
[2025-12-02 02:14:40] 2025-12-02 01:14:00,256 | INFO     | sum of deviations: 2755424415393.7905
[2025-12-02 02:14:40] 2025-12-02 01:14:00,256 | INFO     | mean x: 1764596288.1032968
[2025-12-02 02:14:40] 2025-12-02 01:14:00,256 | INFO     | mean y: 2849112.3135531135
[2025-12-02 02:14:40] 2025-12-02 01:14:00,256 | INFO     | intersect: -6162511682.961952
[2025-12-02 02:14:40] 2025-12-02 01:14:00,258 | INFO     | chi2: 17.670017609728326
[2025-12-02 02:14:40] 2025-12-02 01:14:00,258 | INFO     | current chi2=17.670017609728326 (change=21.21098301022972 %)
[2025-12-02 02:14:40] 2025-12-02 01:14:00,258 | INFO     | left removable region: 10
[2025-12-02 02:14:40] 2025-12-02 01:14:00,260 | INFO     | sum of square deviations: 769721176501.4358
[2025-12-02 02:14:40] 2025-12-02 01:14:00,327 | INFO     | sum of deviations: 2797386054158.926
[2025-12-02 02:14:40] 2025-12-02 01:14:00,328 | INFO     | mean x: 1764596257.6122599
[2025-12-02 02:14:40] 2025-12-02 01:14:00,328 | INFO     | mean y: 2868187.6550960117
[2025-12-02 02:14:40] 2025-12-02 01:14:00,328 | INFO     | intersect: -6410177357.878702
[2025-12-02 02:14:40] 2025-12-02 01:14:00,330 | INFO     | chi2: 9.877272122212167
[2025-12-02 02:14:40] 2025-12-02 01:14:00,330 | INFO     | current memory leak: 3.63 B/s (using 1354 data points, chi2=9.88)
[2025-12-02 02:14:40] 2025-12-02 01:14:00,331 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | ..............................
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | . Timing measurements:
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | . get job = 0 s
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | . initial setup = 5 s
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | . payload setup = 133 s
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | . stage-in = 0 s
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | . payload execution = 83706 s
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | . stage-out = 7 s
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | . log creation = 1 s
[2025-12-02 02:14:40] 2025-12-02 01:14:00,332 | INFO     | ..............................
[2025-12-02 02:14:40] 2025-12-02 01:14:00,901 | INFO     | 
[2025-12-02 02:14:40] 2025-12-02 01:14:00,901 | INFO     | job summary report
[2025-12-02 02:14:40] 2025-12-02 01:14:00,901 | INFO     | --------------------------------------------------
[2025-12-02 02:14:40] 2025-12-02 01:14:00,901 | INFO     | PanDA job id: 6899497941
[2025-12-02 02:14:40] 2025-12-02 01:14:00,901 | INFO     | task id: 47556173
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | errors: (none)
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | pilot state: finished 
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | transexitcode: 0
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | exeerrorcode: 0
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | exeerrordiag: 
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | exitcode: 0
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | exitmsg: OK
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | cpuconsumptiontime: 314925 s
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | nevents: 1000
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | neventsw: 0
[2025-12-02 02:14:40] 2025-12-02 01:14:00,902 | INFO     | pid: 16810
[2025-12-02 02:14:40] 2025-12-02 01:14:00,903 | INFO     | pgrp: 16810
[2025-12-02 02:14:40] 2025-12-02 01:14:00,903 | INFO     | corecount: 8
[2025-12-02 02:14:40] 2025-12-02 01:14:00,903 | INFO     | event service: False
[2025-12-02 02:14:40] 2025-12-02 01:14:00,907 | INFO     | sizes: {0: 2284090, 1: 2284345, 2: 2284345, 12: 2284373, 23: 2284401, 34: 2284429, 44: 2284585, 55: 2284613, 66: 2284641, 77: 2284669, 87: 2285295, 83844: 2344137,
[2025-12-02 02:14:40] 2025-12-02 01:14:00,907 | INFO     | --------------------------------------------------
[2025-12-02 02:14:40] 2025-12-02 01:14:00,907 | INFO     | 
[2025-12-02 02:14:40] 2025-12-02 01:14:00,907 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-02 02:14:40] 2025-12-02 01:14:01,360 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,361 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,361 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,361 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,361 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,361 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,361 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,361 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,362 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 02:14:40] 2025-12-02 01:14:01,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 02:14:40] 2025-12-02 01:14:01,363 | INFO     | job 6899497941 has completed (purged errors)
[2025-12-02 02:14:40] 2025-12-02 01:14:01,363 | INFO     | overall cleanup function is called
[2025-12-02 02:14:40] 2025-12-02 01:14:02,387 | INFO     | --- collectZombieJob: --- 10, [16810]
[2025-12-02 02:14:40] 2025-12-02 01:14:02,387 | INFO     | zombie collector waiting for pid 16810
[2025-12-02 02:14:40] 2025-12-02 01:14:02,387 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 02:14:40] 2025-12-02 01:14:02,387 | INFO     | collected zombie processes
[2025-12-02 02:14:40] 2025-12-02 01:14:02,387 | INFO     | will attempt to kill all subprocesses of pid=16810
[2025-12-02 02:14:40] 2025-12-02 01:14:02,526 | INFO     | process IDs to be killed: [16810] (in reverse order)
[2025-12-02 02:14:40] 2025-12-02 01:14:03,328 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 02:14:40] 2025-12-02 01:14:03,328 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 02:14:40] 2025-12-02 01:14:03,338 | INFO     | did not find any defunct processes belonging to 16810
[2025-12-02 02:14:40] 2025-12-02 01:14:03,341 | INFO     | did not find any defunct processes belonging to 16810
[2025-12-02 02:14:40] 2025-12-02 01:14:03,401 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 02:14:40] 2025-12-02 01:14:03,401 | INFO     | ready for new job
[2025-12-02 02:14:40] 2025-12-02 01:14:03,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 02:14:40] 2025-12-02 01:14:03,407 | INFO     | ***************************************
[2025-12-02 02:14:40] 2025-12-02 01:14:03,407 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 02:14:40] 2025-12-02 01:14:03,407 | INFO     | ***************************************
[2025-12-02 02:14:40] 2025-12-02 01:14:03,407 | INFO     | 
[2025-12-02 02:14:40] 2025-12-02 01:14:03,408 | INFO     | pilot is running in a VM
[2025-12-02 02:14:40] 2025-12-02 01:14:03,408 | INFO     | architecture information:
[2025-12-02 02:14:40] 2025-12-02 01:14:03,419 | INFO     | executing command: cat /etc/os-release
[2025-12-02 02:14:40] 2025-12-02 01:14:03,754 | INFO     | cat /etc/os-release:
[2025-12-02 02:14:40] NAME="CentOS Linux"
[2025-12-02 02:14:40] VERSION="7 (Core)"
[2025-12-02 02:14:40] ID="centos"
[2025-12-02 02:14:40] ID_LIKE="rhel fedora"
[2025-12-02 02:14:40] VERSION_ID="7"
[2025-12-02 02:14:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 02:14:40] ANSI_COLOR="0;31"
[2025-12-02 02:14:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 02:14:40] HOME_URL="https://www.centos.org/"
[2025-12-02 02:14:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 02:14:40] 
[2025-12-02 02:14:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 02:14:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 02:14:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 02:14:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 02:14:40] 
[2025-12-02 02:14:40] 2025-12-02 01:14:03,755 | INFO     | ***************************************
[2025-12-02 02:14:40] 2025-12-02 01:14:04,258 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-02 02:14:40] 2025-12-02 01:14:04,518 | INFO     | sufficient remaining disk space (487996784640 B)
[2025-12-02 02:14:40] 2025-12-02 01:14:04,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 02:14:40] 2025-12-02 01:14:04,519 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 02:14:40] 2025-12-02 01:14:04,519 | INFO     | update_server=False
[2025-12-02 02:14:40] 2025-12-02 01:14:04,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 02:14:40] 2025-12-02 01:14:04,640 | INFO     | all job control threads have been joined
[2025-12-02 02:14:40] 2025-12-02 01:14:04,704 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-02 02:14:40] 2025-12-02 01:14:04,704 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-02 02:14:40] 2025-12-02 01:14:04,704 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 02:14:40] 2025-12-02 01:14:04,704 | INFO     | will abort loop
[2025-12-02 02:14:40] 2025-12-02 01:14:05,030 | INFO     | all payload control threads have been joined
[2025-12-02 02:14:40] 2025-12-02 01:14:05,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 02:14:40] 2025-12-02 01:14:05,524 | INFO     | [job] retrieve thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:05,528 | INFO     | all data control threads have been joined
[2025-12-02 02:14:40] 2025-12-02 01:14:05,646 | INFO     | [job] control thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:05,710 | INFO     | [job] job monitor thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:05,910 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:05,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 02:14:40] 2025-12-02 01:14:06,036 | INFO     | [payload] control thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:06,180 | INFO     | [payload] validate_post thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:06,218 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:06,341 | INFO     | [job] validate thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:06,382 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 02:14:40] 2025-12-02 01:14:06,471 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:06,478 | INFO     | [data] copytool_in thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:06,517 | INFO     | [job] queue monitor thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:06,534 | INFO     | [data] control thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:06,756 | INFO     | [payload] failed_post thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:06,822 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:07,920 | INFO     | [data] copytool_out thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:10,391 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 02:14:40] 2025-12-02 01:14:29,737 | INFO     | [monitor] cgroup control has ended
[2025-12-02 02:14:40] 2025-12-02 01:14:31,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601157437248)>', '<ExcThread(monitor, started 140600443660032)>']
[2025-12-02 02:14:40] 2025-12-02 01:14:32,925 | INFO     | PID=10188 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 02:14:40] 2025-12-02 01:14:32,925 | INFO     | .. there are 9 such processes running
[2025-12-02 02:14:40] 2025-12-02 01:14:32,926 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 02:14:40] 2025-12-02 01:14:32,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 02:14:40] 2025-12-02 01:14:32,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 02:14:40] 2025-12-02 01:14:32,927 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 02:14:40] 2025-12-02 01:14:32,927 | INFO     | [monitor] control thread has ended
[2025-12-02 02:14:40] 2025-12-02 01:14:36,325 | INFO     | all workflow threads have been joined
[2025-12-02 02:14:40] 2025-12-02 01:14:36,325 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 02:14:40] 2025-12-02 01:14:36,325 | INFO     | traces error code: 0
[2025-12-02 02:14:40] 2025-12-02 01:14:36,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 02:14:40] 2025-12-02 01:14:36,742 [wrapper] ==== pilot stdout END ====
[2025-12-02 02:14:40] 2025-12-02 01:14:36,833 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 02:14:40] 2025-12-02 01:14:36,940 [wrapper] pilotpid: 10188
[2025-12-02 02:14:40] 2025-12-02 01:14:37,021 [wrapper] Pilot exit status: 0
[2025-12-02 02:14:40] 2025-12-02 01:14:37,265 [wrapper] pandaids: 6899497941
[2025-12-02 02:14:40] 2025-12-02 01:14:37,383 [wrapper] cleanup supervisor_pilot  4039 10189
[2025-12-02 02:14:40] 2025-12-02 01:14:37,437 [wrapper] Test setup, not cleaning
[2025-12-02 02:14:40] 2025-12-02 01:14:37,462 [wrapper] apfmon messages muted
[2025-12-02 02:14:40] 2025-12-02 01:14:37,543 [wrapper] ==== wrapper stdout END ====
[2025-12-02 02:14:40] 2025-12-02 01:14:37,608 [wrapper] ==== wrapper stderr END ====
[2025-12-02 02:14:40]  *** Error codes and diagnostics ***
[2025-12-02 02:14:40]     "exeErrorCode": 0,
[2025-12-02 02:14:40]     "exeErrorDiag": "",
[2025-12-02 02:14:40]     "pilotErrorCode": 0,
[2025-12-02 02:14:40]     "pilotErrorDiag": "",
[2025-12-02 02:14:40]  *** Listing of results directory ***
[2025-12-02 02:14:40] total 1323872
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc    576529 Nov 27 09:46 pilot3.tar.gz
[2025-12-02 02:14:40] -rwx------. 1 boinc boinc     36292 Nov 27 09:49 runpilot2-wrapper.sh
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc      5112 Nov 27 09:53 queuedata.json
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc       100 Dec  1 02:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 02:14:40] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 02:47 run_atlas
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc       105 Dec  1 02:47 job.xml
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc      6392 Dec  1 02:47 init_data.xml
[2025-12-02 02:14:40] -rw-r--r--. 2 boinc boinc 409807795 Dec  1 02:47 EVNT.47483658._003350.pool.root.1
[2025-12-02 02:14:40] -rw-r--r--. 2 boinc boinc     15847 Dec  1 02:47 start_atlas.sh
[2025-12-02 02:14:40] drwxrwx--x. 2 boinc boinc        68 Dec  1 02:47 shared
[2025-12-02 02:14:40] -rw-r--r--. 2 boinc boinc    590110 Dec  1 02:47 input.tar.gz
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc         0 Dec  1 02:47 boinc_lockfile
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc      2787 Dec  1 02:48 pandaJob.out
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc    993253 Dec  1 02:51 agis_schedconf.cvmfs.json
[2025-12-02 02:14:40] drwx------. 5 boinc boinc      4096 Dec  1 02:52 pilot3
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc       533 Dec  2 01:54 boinc_task_state.xml
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc 914713845 Dec  2 02:11 HITS.47556173._003064.pool.root.1
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc      1034 Dec  2 02:12 memory_monitor_summary.json
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc   1516240 Dec  2 02:12 agis_ddmendpoints.agis.ALL.json
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc   2455685 Dec  2 02:12 log.47556173._003064.job.log.tgz.1
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc      7955 Dec  2 02:14 heartbeat.json
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc        29 Dec  2 02:14 wrapper_checkpoint.txt
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc      8192 Dec  2 02:14 boinc_mmap_file
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc        95 Dec  2 02:14 pilot_heartbeat.json
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc      5071 Dec  2 02:14 pilotlog.txt
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc  11156784 Dec  2 02:14 log.47556173._003064.job.log.1
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc       353 Dec  2 02:14 output.list
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc       620 Dec  2 02:14 runtime_log
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc  13629440 Dec  2 02:14 result.tar.gz
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc      8833 Dec  2 02:14 runtime_log.err
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc       662 Dec  2 02:14 PjjMDm9rmi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwsNKDmIqa5xm.diag
[2025-12-02 02:14:40] -rw-r--r--. 1 boinc boinc     21432 Dec  2 02:14 stderr.txt
[2025-12-02 02:14:40] HITS file was successfully produced:
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc 914713845 Dec  2 02:11 shared/HITS.pool.root.1
[2025-12-02 02:14:40]  *** Contents of shared directory: ***
[2025-12-02 02:14:40] total 1307388
[2025-12-02 02:14:40] -rw-r--r--. 2 boinc boinc 409807795 Dec  1 02:47 ATLAS.root_0
[2025-12-02 02:14:40] -rw-r--r--. 2 boinc boinc     15847 Dec  1 02:47 start_atlas.sh
[2025-12-02 02:14:40] -rw-r--r--. 2 boinc boinc    590110 Dec  1 02:47 input.tar.gz
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc 914713845 Dec  2 02:11 HITS.pool.root.1
[2025-12-02 02:14:40] -rw-------. 1 boinc boinc  13629440 Dec  2 02:14 result.tar.gz
02:14:41 (6400): run_atlas exited; CPU time 315509.609663
02:14:41 (6400): called boinc_finish(0)

</stderr_txt>
]]>

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