Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:09:33 (2342): wrapper (7.7.26015): starting
20:09:33 (2342): wrapper: running run_atlas (--nthreads 12)
[2025-11-28 20:09:33] Arguments: --nthreads 12
[2025-11-28 20:09:33] Threads: 12
[2025-11-28 20:09:33] Checking for CVMFS
[2025-11-28 20:09:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 20:09:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 20:09:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 20:09:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 20:09:33] 2.11.2.0 10903 9787 86736 153424 1 81 13272606 20275200 1 130560 0 4257944 99.861 810304 42891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 20:09:33] CVMFS is ok
[2025-11-28 20:09:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 20:09:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 20:09:33] Further information can be found at the LHC@home message board.
[2025-11-28 20:09:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 20:09:33] Checking for apptainer binary...
[2025-11-28 20:09:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 20:09:33] Running /usr/bin/apptainer --version
[2025-11-28 20:09:33] apptainer version 1.3.2-1.el7
[2025-11-28 20:09:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 20:09:35] c-205-22.aglt2.org
[2025-11-28 20:09:35] apptainer works
[2025-11-28 20:09:35] Set ATHENA_PROC_NUMBER=12
[2025-11-28 20:09:35] Set ATHENA_CORE_NUMBER=12
[2025-11-28 20:09:35] Starting ATLAS job with PandaID=6899576064
[2025-11-28 20:09:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 03:13:38]  *** The last 200 lines of the pilot log: ***
[2025-11-29 03:13:38] 2025-11-29 08:12:37,327 | INFO     | time since job start (25367s) is within the limit (172800.0s)
[2025-11-29 03:13:38] 2025-11-29 08:12:39,335 | INFO     | time since job start (25369s) is within the limit (172800.0s)
[2025-11-29 03:13:38] 2025-11-29 08:12:39,456 | INFO     | monitor loop #1901: job 0:6899576064 is in state 'finished'
[2025-11-29 03:13:38] 2025-11-29 08:12:39,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,350 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-29 03:13:38] 2025-11-29 08:12:40,354 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-29 03:13:38] 2025-11-29 08:12:40,357 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6899576064/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,358 | INFO     | extracted standard info from prmon json
[2025-11-29 03:13:38] 2025-11-29 08:12:40,358 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 03:13:38] 2025-11-29 08:12:40,358 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 03:13:38] 2025-11-29 08:12:40,366 | INFO     | fitting pss+swap vs Time
[2025-11-29 03:13:38] 2025-11-29 08:12:40,366 | INFO     | sum of square deviations: 22323352180.220993
[2025-11-29 03:13:38] 2025-11-29 08:12:40,370 | INFO     | sum of deviations: 350211182898.45667
[2025-11-29 03:13:38] 2025-11-29 08:12:40,370 | INFO     | mean x: 1764391277.7067308
[2025-11-29 03:13:38] 2025-11-29 08:12:40,370 | INFO     | mean y: 3413102.372596154
[2025-11-29 03:13:38] 2025-11-29 08:12:40,370 | INFO     | intersect: -27676549632.295708
[2025-11-29 03:13:38] 2025-11-29 08:12:40,371 | INFO     | chi2: 6.390638513479263
[2025-11-29 03:13:38] 2025-11-29 08:12:40,371 | INFO     | sum of square deviations: 21528089080.00476
[2025-11-29 03:13:38] 2025-11-29 08:12:40,375 | INFO     | sum of deviations: 516117967465.144
[2025-11-29 03:13:38] 2025-11-29 08:12:40,375 | INFO     | mean x: 1764391125.2092457
[2025-11-29 03:13:38] 2025-11-29 08:12:40,375 | INFO     | mean y: 3444886.1727493918
[2025-11-29 03:13:38] 2025-11-29 08:12:40,375 | INFO     | intersect: -42296359707.36774
[2025-11-29 03:13:38] 2025-11-29 08:12:40,376 | INFO     | chi2: 3.107048434079836
[2025-11-29 03:13:38] 2025-11-29 08:12:40,376 | INFO     | current chi2=3.107048434079836 (change=51.38125200593983 %)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,376 | INFO     | sum of square deviations: 20751942617.283276
[2025-11-29 03:13:38] 2025-11-29 08:12:40,380 | INFO     | sum of deviations: 576427729976.7439
[2025-11-29 03:13:38] 2025-11-29 08:12:40,380 | INFO     | mean x: 1764390972.7118227
[2025-11-29 03:13:38] 2025-11-29 08:12:40,380 | INFO     | mean y: 3456685.8866995075
[2025-11-29 03:13:38] 2025-11-29 08:12:40,380 | INFO     | intersect: -49006118077.71587
[2025-11-29 03:13:38] 2025-11-29 08:12:40,381 | INFO     | chi2: 2.405107500947623
[2025-11-29 03:13:38] 2025-11-29 08:12:40,381 | INFO     | current chi2=2.405107500947623 (change=22.59188899126689 %)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,381 | INFO     | right removable region: 405
[2025-11-29 03:13:38] 2025-11-29 08:12:40,382 | INFO     | sum of square deviations: 21528061873.42097
[2025-11-29 03:13:38] 2025-11-29 08:12:40,385 | INFO     | sum of deviations: 222995765945.1507
[2025-11-29 03:13:38] 2025-11-29 08:12:40,385 | INFO     | mean x: 1764391430.2068126
[2025-11-29 03:13:38] 2025-11-29 08:12:40,386 | INFO     | mean y: 3437405.3746958636
[2025-11-29 03:13:38] 2025-11-29 08:12:40,386 | INFO     | intersect: -18272792973.34753
[2025-11-29 03:13:38] 2025-11-29 08:12:40,386 | INFO     | chi2: 4.216488653461994
[2025-11-29 03:13:38] 2025-11-29 08:12:40,386 | INFO     | current chi2=4.216488653461994 (change=34.02085496514172 %)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,387 | INFO     | sum of square deviations: 20751863255.704536
[2025-11-29 03:13:38] 2025-11-29 08:12:40,390 | INFO     | sum of deviations: 183287399614.04468
[2025-11-29 03:13:38] 2025-11-29 08:12:40,390 | INFO     | mean x: 1764391582.7093596
[2025-11-29 03:13:38] 2025-11-29 08:12:40,391 | INFO     | mean y: 3445199.093596059
[2025-11-29 03:13:38] 2025-11-29 08:12:40,391 | INFO     | intersect: -15580251604.942032
[2025-11-29 03:13:38] 2025-11-29 08:12:40,391 | INFO     | chi2: 4.118448503527594
[2025-11-29 03:13:38] 2025-11-29 08:12:40,391 | INFO     | current chi2=4.118448503527594 (change=2.325161004617034 %)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,391 | INFO     | left removable region: 20
[2025-11-29 03:13:38] 2025-11-29 08:12:40,392 | INFO     | sum of square deviations: 17695448342.23378
[2025-11-29 03:13:38] 2025-11-29 08:12:40,395 | INFO     | sum of deviations: 353194706647.987
[2025-11-29 03:13:38] 2025-11-29 08:12:40,395 | INFO     | mean x: 1764391552.2207792
[2025-11-29 03:13:38] 2025-11-29 08:12:40,395 | INFO     | mean y: 3501544.3766233767
[2025-11-29 03:13:38] 2025-11-29 08:12:40,396 | INFO     | intersect: -35213111487.770966
[2025-11-29 03:13:38] 2025-11-29 08:12:40,396 | INFO     | chi2: 0.05328985081014153
[2025-11-29 03:13:38] 2025-11-29 08:12:40,396 | INFO     | current memory leak: 19.96 B/s (using 385 data points, chi2=0.05)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,397 | INFO     | could have reported an average CPU frequency of 2333 MHz (18 samples)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,397 | INFO     | ..............................
[2025-11-29 03:13:38] 2025-11-29 08:12:40,397 | INFO     | . Timing measurements:
[2025-11-29 03:13:38] 2025-11-29 08:12:40,397 | INFO     | . get job = 0 s
[2025-11-29 03:13:38] 2025-11-29 08:12:40,397 | INFO     | . initial setup = 2 s
[2025-11-29 03:13:38] 2025-11-29 08:12:40,397 | INFO     | . payload setup = 7 s
[2025-11-29 03:13:38] 2025-11-29 08:12:40,397 | INFO     | . stage-in = 0 s
[2025-11-29 03:13:38] 2025-11-29 08:12:40,397 | INFO     | . payload execution = 25334 s
[2025-11-29 03:13:38] 2025-11-29 08:12:40,398 | INFO     | . stage-out = 3 s
[2025-11-29 03:13:38] 2025-11-29 08:12:40,398 | INFO     | . log creation = 0 s
[2025-11-29 03:13:38] 2025-11-29 08:12:40,398 | INFO     | ..............................
[2025-11-29 03:13:38] 2025-11-29 08:12:40,480 | INFO     | 
[2025-11-29 03:13:38] 2025-11-29 08:12:40,480 | INFO     | job summary report
[2025-11-29 03:13:38] 2025-11-29 08:12:40,481 | INFO     | --------------------------------------------------
[2025-11-29 03:13:38] 2025-11-29 08:12:40,481 | INFO     | PanDA job id: 6899576064
[2025-11-29 03:13:38] 2025-11-29 08:12:40,481 | INFO     | task id: 47556185
[2025-11-29 03:13:38] 2025-11-29 08:12:40,481 | INFO     | errors: (none)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,481 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 03:13:38] 2025-11-29 08:12:40,481 | INFO     | pilot state: finished 
[2025-11-29 03:13:38] 2025-11-29 08:12:40,481 | INFO     | transexitcode: 0
[2025-11-29 03:13:38] 2025-11-29 08:12:40,481 | INFO     | exeerrorcode: 0
[2025-11-29 03:13:38] 2025-11-29 08:12:40,481 | INFO     | exeerrordiag: 
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | exitcode: 0
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | exitmsg: OK
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | cpuconsumptiontime: 290175 s
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | nevents: 1000
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | neventsw: 0
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | pid: 12562
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | pgrp: 12562
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | corecount: 12
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | event service: False
[2025-11-29 03:13:38] 2025-11-29 08:12:40,482 | INFO     | sizes: {0: 2284314, 5: 2284576, 11: 2284632, 25345: 2321728, 25348: 2330778, 25354: 2330968}
[2025-11-29 03:13:38] 2025-11-29 08:12:40,483 | INFO     | --------------------------------------------------
[2025-11-29 03:13:38] 2025-11-29 08:12:40,483 | INFO     | 
[2025-11-29 03:13:38] 2025-11-29 08:12:40,483 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-29 03:13:38] 2025-11-29 08:12:40,507 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,508 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,508 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,508 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,508 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,508 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,508 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,509 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,509 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,509 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,509 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,509 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,509 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,511 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,511 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 03:13:38] 2025-11-29 08:12:40,511 | INFO     | job 6899576064 has completed (purged errors)
[2025-11-29 03:13:38] 2025-11-29 08:12:40,511 | INFO     | overall cleanup function is called
[2025-11-29 03:13:38] 2025-11-29 08:12:41,528 | INFO     | --- collectZombieJob: --- 10, [12562]
[2025-11-29 03:13:38] 2025-11-29 08:12:41,528 | INFO     | zombie collector waiting for pid 12562
[2025-11-29 03:13:38] 2025-11-29 08:12:41,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 03:13:38] 2025-11-29 08:12:41,529 | INFO     | collected zombie processes
[2025-11-29 03:13:38] 2025-11-29 08:12:41,529 | INFO     | will attempt to kill all subprocesses of pid=12562
[2025-11-29 03:13:38] 2025-11-29 08:12:41,620 | INFO     | process IDs to be killed: [12562] (in reverse order)
[2025-11-29 03:13:38] 2025-11-29 08:12:41,733 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 03:13:38] 2025-11-29 08:12:41,733 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 03:13:38] 2025-11-29 08:12:41,737 | INFO     | did not find any defunct processes belonging to 12562
[2025-11-29 03:13:38] 2025-11-29 08:12:41,739 | INFO     | did not find any defunct processes belonging to 12562
[2025-11-29 03:13:38] 2025-11-29 08:12:41,741 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 03:13:38] 2025-11-29 08:12:41,741 | INFO     | ready for new job
[2025-11-29 03:13:38] 2025-11-29 08:12:41,741 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 03:13:38] 2025-11-29 08:12:41,743 | INFO     | ***************************************
[2025-11-29 03:13:38] 2025-11-29 08:12:41,743 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 03:13:38] 2025-11-29 08:12:41,743 | INFO     | ***************************************
[2025-11-29 03:13:38] 2025-11-29 08:12:41,743 | INFO     | 
[2025-11-29 03:13:38] 2025-11-29 08:12:41,744 | INFO     | architecture information:
[2025-11-29 03:13:38] 2025-11-29 08:12:41,745 | INFO     | executing command: cat /etc/os-release
[2025-11-29 03:13:38] 2025-11-29 08:12:41,760 | INFO     | cat /etc/os-release:
[2025-11-29 03:13:38] NAME="CentOS Linux"
[2025-11-29 03:13:38] VERSION="7 (Core)"
[2025-11-29 03:13:38] ID="centos"
[2025-11-29 03:13:38] ID_LIKE="rhel fedora"
[2025-11-29 03:13:38] VERSION_ID="7"
[2025-11-29 03:13:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 03:13:38] ANSI_COLOR="0;31"
[2025-11-29 03:13:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 03:13:38] HOME_URL="https://www.centos.org/"
[2025-11-29 03:13:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 03:13:38] 
[2025-11-29 03:13:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 03:13:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 03:13:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 03:13:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 03:13:38] 
[2025-11-29 03:13:38] 2025-11-29 08:12:41,760 | INFO     | ***************************************
[2025-11-29 03:13:38] 2025-11-29 08:12:42,263 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-29 03:13:38] 2025-11-29 08:12:42,281 | INFO     | sufficient remaining disk space (28252831744 B)
[2025-11-29 03:13:38] 2025-11-29 08:12:42,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 03:13:38] 2025-11-29 08:12:42,281 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 03:13:38] 2025-11-29 08:12:42,281 | INFO     | update_server=False
[2025-11-29 03:13:38] 2025-11-29 08:12:42,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 03:13:38] 2025-11-29 08:12:42,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 03:13:38] 2025-11-29 08:12:42,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 03:13:38] 2025-11-29 08:12:42,725 | INFO     | all payload control threads have been joined
[2025-11-29 03:13:38] 2025-11-29 08:12:42,970 | INFO     | all data control threads have been joined
[2025-11-29 03:13:38] 2025-11-29 08:12:42,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 03:13:38] 2025-11-29 08:12:42,975 | INFO     | aborting loop
[2025-11-29 03:13:38] 2025-11-29 08:12:43,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 03:13:38] 2025-11-29 08:12:43,285 | INFO     | [job] queue monitor thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:43,287 | INFO     | [job] retrieve thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:43,291 | INFO     | [data] copytool_in thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:43,450 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:43,534 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:43,730 | INFO     | [payload] control thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:43,931 | INFO     | [payload] failed_post thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:43,938 | INFO     | all job control threads have been joined
[2025-11-29 03:13:38] 2025-11-29 08:12:43,975 | INFO     | [data] control thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:43,980 | INFO     | [job] job monitor thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:44,064 | INFO     | [payload] validate_post thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:44,468 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:44,775 | INFO     | [job] validate thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:44,775 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:44,943 | INFO     | [job] control thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:45,238 | INFO     | [data] copytool_out thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:12:46,288 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 03:13:38] 2025-11-29 08:13:12,541 | INFO     | PID=6048 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-29 03:13:38] 2025-11-29 08:13:12,542 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 03:13:38] 2025-11-29 08:13:12,542 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 03:13:38] 2025-11-29 08:13:12,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 03:13:38] 2025-11-29 08:13:31,439 | INFO     | [monitor] cgroup control has ended
[2025-11-29 03:13:38] 2025-11-29 08:13:33,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839711852352)>', '<ExcThread(monitor, started 139839252961024)>']
[2025-11-29 03:13:38] 2025-11-29 08:13:33,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 03:13:38] 2025-11-29 08:13:33,646 | INFO     | [monitor] control thread has ended
[2025-11-29 03:13:38] 2025-11-29 08:13:38,553 | INFO     | all workflow threads have been joined
[2025-11-29 03:13:38] 2025-11-29 08:13:38,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 03:13:38] 2025-11-29 08:13:38,553 | INFO     | traces error code: 0
[2025-11-29 03:13:38] 2025-11-29 08:13:38,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 03:13:38] 2025-11-29 08:13:38,657 [wrapper] ==== pilot stdout END ====
[2025-11-29 03:13:38] 2025-11-29 08:13:38,661 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 03:13:38] 2025-11-29 08:13:38,665 [wrapper] pilotpid: 6048
[2025-11-29 03:13:38] 2025-11-29 08:13:38,669 [wrapper] Pilot exit status: 0
[2025-11-29 03:13:38] 2025-11-29 08:13:38,684 [wrapper] pandaids: 6899576064
[2025-11-29 03:13:38] 2025-11-29 08:13:38,731 [wrapper] cleanup supervisor_pilot 10719 6049
[2025-11-29 03:13:38] 2025-11-29 08:13:38,735 [wrapper] Test setup, not cleaning
[2025-11-29 03:13:38] 2025-11-29 08:13:38,739 [wrapper] apfmon messages muted
[2025-11-29 03:13:38] 2025-11-29 08:13:38,742 [wrapper] ==== wrapper stdout END ====
[2025-11-29 03:13:38] 2025-11-29 08:13:38,746 [wrapper] ==== wrapper stderr END ====
[2025-11-29 03:13:38]  *** Error codes and diagnostics ***
[2025-11-29 03:13:38]     "exeErrorCode": 0,
[2025-11-29 03:13:38]     "exeErrorDiag": "",
[2025-11-29 03:13:38]     "pilotErrorCode": 0,
[2025-11-29 03:13:38]     "pilotErrorDiag": "",
[2025-11-29 03:13:38]  *** Listing of results directory ***
[2025-11-29 03:13:38] total 1304428
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas    576529 Nov 27 03:46 pilot3.tar.gz
[2025-11-29 03:13:38] -rwx------ 1 boincer umatlas     36292 Nov 27 03:47 runpilot2-wrapper.sh
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas      5112 Nov 27 03:49 queuedata.json
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas       100 Nov 28 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 03:13:38] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 20:09 run_atlas
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas       105 Nov 28 20:09 job.xml
[2025-11-29 03:13:38] -rw-r--r-- 2 boincer umatlas 411815861 Nov 28 20:09 EVNT.47483658._004331.pool.root.1
[2025-11-29 03:13:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 20:09 start_atlas.sh
[2025-11-29 03:13:38] drwxrwx--x 2 boincer umatlas      4096 Nov 28 20:09 shared
[2025-11-29 03:13:38] -rw-r--r-- 2 boincer umatlas    590115 Nov 28 20:09 input.tar.gz
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas         0 Nov 28 20:09 boinc_lockfile
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas      2786 Nov 28 20:09 pandaJob.out
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas        57 Nov 28 20:09 setup.sh.local
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas    991818 Nov 28 20:09 agis_schedconf.cvmfs.json
[2025-11-29 03:13:38] drwx------ 5 boincer umatlas      4096 Nov 28 20:09 pilot3
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas       532 Nov 29 03:03 boinc_task_state.xml
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas      5956 Nov 29 03:09 init_data.xml
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas 908529355 Nov 29 03:12 HITS.47556185._000943.pool.root.1
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas      1062 Nov 29 03:12 memory_monitor_summary.json
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas   1516240 Nov 29 03:12 agis_ddmendpoints.agis.ALL.json
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas   2168770 Nov 29 03:12 log.47556185._000943.job.log.tgz.1
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas      8678 Nov 29 03:12 heartbeat.json
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas        95 Nov 29 03:13 pilot_heartbeat.json
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas        29 Nov 29 03:13 wrapper_checkpoint.txt
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas      8192 Nov 29 03:13 boinc_mmap_file
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas      4745 Nov 29 03:13 pilotlog.txt
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas   3567668 Nov 29 03:13 log.47556185._000943.job.log.1
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas       353 Nov 29 03:13 output.list
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas       620 Nov 29 03:13 runtime_log
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas   5754880 Nov 29 03:13 result.tar.gz
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas      9345 Nov 29 03:13 runtime_log.err
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas       670 Nov 29 03:13 20CODm3pmi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXdKKDmEAAoOo.diag
[2025-11-29 03:13:38] -rw-r--r-- 1 boincer umatlas     21294 Nov 29 03:13 stderr.txt
[2025-11-29 03:13:38] HITS file was successfully produced:
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas 908529355 Nov 29 03:12 shared/HITS.pool.root.1
[2025-11-29 03:13:38]  *** Contents of shared directory: ***
[2025-11-29 03:13:38] total 1295620
[2025-11-29 03:13:38] -rw-r--r-- 2 boincer umatlas 411815861 Nov 28 20:09 ATLAS.root_0
[2025-11-29 03:13:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 20:09 start_atlas.sh
[2025-11-29 03:13:38] -rw-r--r-- 2 boincer umatlas    590115 Nov 28 20:09 input.tar.gz
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas 908529355 Nov 29 03:12 HITS.pool.root.1
[2025-11-29 03:13:38] -rw------- 1 boincer umatlas   5754880 Nov 29 03:13 result.tar.gz
03:13:40 (2342): run_atlas exited; CPU time 283464.616890
03:13:40 (2342): called boinc_finish(0)

</stderr_txt>
]]>

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