Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:24:43 (4052506): wrapper (7.7.26015): starting
07:24:43 (4052506): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 07:24:43] Arguments: --nthreads 12
[2025-11-29 07:24:43] Threads: 12
[2025-11-29 07:24:43] Checking for CVMFS
[2025-11-29 07:24:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 07:24:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 07:24:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 07:24:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 07:24:44] 2.13.3.0 9777 11014 93380 153433 2 81 2650271 4097025 1044 130560 0 8266631 99.989 408963 12157 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-29 07:24:44] CVMFS is ok
[2025-11-29 07:24:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 07:24:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 07:24:44] Further information can be found at the LHC@home message board.
[2025-11-29 07:24:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 07:24:44] Checking for apptainer binary...
[2025-11-29 07:24:44] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-29 07:24:44] apptainer is not installed, using version from CVMFS
[2025-11-29 07:24:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 07:24:44] pckelar6.cern.ch
[2025-11-29 07:24:44] apptainer works
[2025-11-29 07:24:44] Set ATHENA_PROC_NUMBER=12
[2025-11-29 07:24:44] Set ATHENA_CORE_NUMBER=12
[2025-11-29 07:24:44] Starting ATLAS job with PandaID=6899576220
[2025-11-29 07:24:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 19:16:35]  *** The last 200 lines of the pilot log: ***
[2025-11-29 19:16:35] 2025-11-29 18:16:03,139 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6899576220/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,140 | INFO     | extracted standard info from prmon json
[2025-11-29 19:16:35] 2025-11-29 18:16:03,140 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 19:16:35] 2025-11-29 18:16:03,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 19:16:35] 2025-11-29 18:16:03,160 | INFO     | fitting pss+swap vs Time
[2025-11-29 19:16:35] 2025-11-29 18:16:03,162 | INFO     | sum of square deviations: 105902948402.67802
[2025-11-29 19:16:35] 2025-11-29 18:16:03,178 | INFO     | sum of deviations: 1613671261280.7344
[2025-11-29 19:16:35] 2025-11-29 18:16:03,178 | INFO     | mean x: 1764418813.9785407
[2025-11-29 19:16:35] 2025-11-29 18:16:03,178 | INFO     | mean y: 3609554.115879828
[2025-11-29 19:16:35] 2025-11-29 18:16:03,179 | INFO     | intersect: -26881307022.08976
[2025-11-29 19:16:35] 2025-11-29 18:16:03,180 | INFO     | chi2: 5.900650454798429
[2025-11-29 19:16:35] 2025-11-29 18:16:03,181 | INFO     | sum of square deviations: 103646770525.35579
[2025-11-29 19:16:35] 2025-11-29 18:16:03,197 | INFO     | sum of deviations: 1887497233317.2195
[2025-11-29 19:16:35] 2025-11-29 18:16:03,197 | INFO     | mean x: 1764418661.4855907
[2025-11-29 19:16:35] 2025-11-29 18:16:03,197 | INFO     | mean y: 3628052.521613833
[2025-11-29 19:16:35] 2025-11-29 18:16:03,198 | INFO     | intersect: -32127960081.742565
[2025-11-29 19:16:35] 2025-11-29 18:16:03,199 | INFO     | chi2: 3.0173021937287383
[2025-11-29 19:16:35] 2025-11-29 18:16:03,199 | INFO     | current chi2=3.0173021937287383 (change=48.86492231928333 %)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,200 | INFO     | sum of square deviations: 101422872322.9639
[2025-11-29 19:16:35] 2025-11-29 18:16:03,216 | INFO     | sum of deviations: 1979200295564.2234
[2025-11-29 19:16:35] 2025-11-29 18:16:03,217 | INFO     | mean x: 1764418508.992743
[2025-11-29 19:16:35] 2025-11-29 18:16:03,217 | INFO     | mean y: 3634326.8447024673
[2025-11-29 19:16:35] 2025-11-29 18:16:03,217 | INFO     | intersect: -34427826294.55541
[2025-11-29 19:16:35] 2025-11-29 18:16:03,218 | INFO     | chi2: 2.4481994731446117
[2025-11-29 19:16:35] 2025-11-29 18:16:03,218 | INFO     | current chi2=2.4481994731446117 (change=18.86131000623566 %)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,218 | INFO     | right removable region: 688
[2025-11-29 19:16:35] 2025-11-29 18:16:03,219 | INFO     | sum of square deviations: 103646395681.32419
[2025-11-29 19:16:35] 2025-11-29 18:16:03,227 | INFO     | monitor loop #3013: job 0:6899576220 is in state 'finished'
[2025-11-29 19:16:35] 2025-11-29 18:16:03,236 | INFO     | sum of deviations: 1368705259437.427
[2025-11-29 19:16:35] 2025-11-29 18:16:03,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,236 | INFO     | mean x: 1764418966.48415
[2025-11-29 19:16:35] 2025-11-29 18:16:03,237 | INFO     | mean y: 3626084.1296829972
[2025-11-29 19:16:35] 2025-11-29 18:16:03,237 | INFO     | intersect: -23296455924.5412
[2025-11-29 19:16:35] 2025-11-29 18:16:03,238 | INFO     | chi2: 3.738340171663408
[2025-11-29 19:16:35] 2025-11-29 18:16:03,238 | INFO     | current chi2=3.738340171663408 (change=36.64528681539885 %)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,239 | INFO     | sum of square deviations: 101422292218.82437
[2025-11-29 19:16:35] 2025-11-29 18:16:03,255 | INFO     | sum of deviations: 1292646637065.718
[2025-11-29 19:16:35] 2025-11-29 18:16:03,256 | INFO     | mean x: 1764419118.9840348
[2025-11-29 19:16:35] 2025-11-29 18:16:03,256 | INFO     | mean y: 3631297.7924528304
[2025-11-29 19:16:35] 2025-11-29 18:16:03,256 | INFO     | intersect: -22484230005.99545
[2025-11-29 19:16:35] 2025-11-29 18:16:03,257 | INFO     | chi2: 3.6630957633250705
[2025-11-29 19:16:35] 2025-11-29 18:16:03,257 | INFO     | current chi2=3.6630957633250705 (change=2.012775854607602 %)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,257 | INFO     | left removable region: 20
[2025-11-29 19:16:35] 2025-11-29 18:16:03,258 | INFO     | sum of square deviations: 92428703284.9986
[2025-11-29 19:16:35] 2025-11-29 18:16:03,274 | INFO     | sum of deviations: 1550713725581.584
[2025-11-29 19:16:35] 2025-11-29 18:16:03,274 | INFO     | mean x: 1764419088.498503
[2025-11-29 19:16:35] 2025-11-29 18:16:03,274 | INFO     | mean y: 3663719.082335329
[2025-11-29 19:16:35] 2025-11-29 18:16:03,274 | INFO     | intersect: -29598708714.68579
[2025-11-29 19:16:35] 2025-11-29 18:16:03,275 | INFO     | chi2: 0.16952860225200386
[2025-11-29 19:16:35] 2025-11-29 18:16:03,276 | INFO     | current memory leak: 16.78 B/s (using 668 data points, chi2=0.17)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,277 | INFO     | could have reported an average CPU frequency of 2803 MHz (27 samples)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,277 | INFO     | ..............................
[2025-11-29 19:16:35] 2025-11-29 18:16:03,277 | INFO     | . Timing measurements:
[2025-11-29 19:16:35] 2025-11-29 18:16:03,277 | INFO     | . get job = 0 s
[2025-11-29 19:16:35] 2025-11-29 18:16:03,277 | INFO     | . initial setup = 1 s
[2025-11-29 19:16:35] 2025-11-29 18:16:03,278 | INFO     | . payload setup = 8 s
[2025-11-29 19:16:35] 2025-11-29 18:16:03,278 | INFO     | . stage-in = 0 s
[2025-11-29 19:16:35] 2025-11-29 18:16:03,278 | INFO     | . payload execution = 42632 s
[2025-11-29 19:16:35] 2025-11-29 18:16:03,278 | INFO     | . stage-out = 2 s
[2025-11-29 19:16:35] 2025-11-29 18:16:03,278 | INFO     | . log creation = 0 s
[2025-11-29 19:16:35] 2025-11-29 18:16:03,278 | INFO     | ..............................
[2025-11-29 19:16:35] 2025-11-29 18:16:03,435 | INFO     | 
[2025-11-29 19:16:35] 2025-11-29 18:16:03,435 | INFO     | job summary report
[2025-11-29 19:16:35] 2025-11-29 18:16:03,435 | INFO     | --------------------------------------------------
[2025-11-29 19:16:35] 2025-11-29 18:16:03,436 | INFO     | PanDA job id: 6899576220
[2025-11-29 19:16:35] 2025-11-29 18:16:03,436 | INFO     | task id: 47556173
[2025-11-29 19:16:35] 2025-11-29 18:16:03,436 | INFO     | errors: (none)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,436 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 19:16:35] 2025-11-29 18:16:03,436 | INFO     | pilot state: finished 
[2025-11-29 19:16:35] 2025-11-29 18:16:03,436 | INFO     | transexitcode: 0
[2025-11-29 19:16:35] 2025-11-29 18:16:03,437 | INFO     | exeerrorcode: 0
[2025-11-29 19:16:35] 2025-11-29 18:16:03,437 | INFO     | exeerrordiag: 
[2025-11-29 19:16:35] 2025-11-29 18:16:03,437 | INFO     | exitcode: 0
[2025-11-29 19:16:35] 2025-11-29 18:16:03,437 | INFO     | exitmsg: OK
[2025-11-29 19:16:35] 2025-11-29 18:16:03,437 | INFO     | cpuconsumptiontime: 493883 s
[2025-11-29 19:16:35] 2025-11-29 18:16:03,437 | INFO     | nevents: 1000
[2025-11-29 19:16:35] 2025-11-29 18:16:03,437 | INFO     | neventsw: 0
[2025-11-29 19:16:35] 2025-11-29 18:16:03,438 | INFO     | pid: 4064645
[2025-11-29 19:16:35] 2025-11-29 18:16:03,438 | INFO     | pgrp: 4064645
[2025-11-29 19:16:35] 2025-11-29 18:16:03,438 | INFO     | corecount: 12
[2025-11-29 19:16:35] 2025-11-29 18:16:03,438 | INFO     | event service: False
[2025-11-29 19:16:35] 2025-11-29 18:16:03,438 | INFO     | sizes: {0: 2284316, 5: 2284578, 11: 2284634, 42644: 2328580, 42647: 2337630, 42652: 2337820}
[2025-11-29 19:16:35] 2025-11-29 18:16:03,438 | INFO     | --------------------------------------------------
[2025-11-29 19:16:35] 2025-11-29 18:16:03,438 | INFO     | 
[2025-11-29 19:16:35] 2025-11-29 18:16:03,439 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-29 19:16:35] 2025-11-29 18:16:03,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 19:16:35] 2025-11-29 18:16:03,464 | INFO     | job 6899576220 has completed (purged errors)
[2025-11-29 19:16:35] 2025-11-29 18:16:03,465 | INFO     | overall cleanup function is called
[2025-11-29 19:16:35] 2025-11-29 18:16:04,485 | INFO     | --- collectZombieJob: --- 10, [4064645]
[2025-11-29 19:16:35] 2025-11-29 18:16:04,485 | INFO     | zombie collector waiting for pid 4064645
[2025-11-29 19:16:35] 2025-11-29 18:16:04,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 19:16:35] 2025-11-29 18:16:04,485 | INFO     | collected zombie processes
[2025-11-29 19:16:35] 2025-11-29 18:16:04,485 | INFO     | will attempt to kill all subprocesses of pid=4064645
[2025-11-29 19:16:35] 2025-11-29 18:16:04,684 | INFO     | process IDs to be killed: [4064645] (in reverse order)
[2025-11-29 19:16:35] 2025-11-29 18:16:04,748 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 19:16:35] 2025-11-29 18:16:04,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 19:16:35] 2025-11-29 18:16:04,756 | INFO     | did not find any defunct processes belonging to 4064645
[2025-11-29 19:16:35] 2025-11-29 18:16:04,763 | INFO     | did not find any defunct processes belonging to 4064645
[2025-11-29 19:16:35] 2025-11-29 18:16:04,766 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 19:16:35] 2025-11-29 18:16:04,766 | INFO     | ready for new job
[2025-11-29 19:16:35] 2025-11-29 18:16:04,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 19:16:35] 2025-11-29 18:16:04,769 | INFO     | ***************************************
[2025-11-29 19:16:35] 2025-11-29 18:16:04,769 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 19:16:35] 2025-11-29 18:16:04,769 | INFO     | ***************************************
[2025-11-29 19:16:35] 2025-11-29 18:16:04,770 | INFO     | 
[2025-11-29 19:16:35] 2025-11-29 18:16:04,771 | INFO     | architecture information:
[2025-11-29 19:16:35] 2025-11-29 18:16:04,772 | INFO     | executing command: cat /etc/os-release
[2025-11-29 19:16:35] 2025-11-29 18:16:04,786 | INFO     | cat /etc/os-release:
[2025-11-29 19:16:35] NAME="CentOS Linux"
[2025-11-29 19:16:35] VERSION="7 (Core)"
[2025-11-29 19:16:35] ID="centos"
[2025-11-29 19:16:35] ID_LIKE="rhel fedora"
[2025-11-29 19:16:35] VERSION_ID="7"
[2025-11-29 19:16:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 19:16:35] ANSI_COLOR="0;31"
[2025-11-29 19:16:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 19:16:35] HOME_URL="https://www.centos.org/"
[2025-11-29 19:16:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 19:16:35] 
[2025-11-29 19:16:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 19:16:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 19:16:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 19:16:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 19:16:35] 
[2025-11-29 19:16:35] 2025-11-29 18:16:04,787 | INFO     | ***************************************
[2025-11-29 19:16:35] 2025-11-29 18:16:05,290 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-29 19:16:35] 2025-11-29 18:16:05,309 | INFO     | sufficient remaining disk space (866415280128 B)
[2025-11-29 19:16:35] 2025-11-29 18:16:05,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 19:16:35] 2025-11-29 18:16:05,310 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 19:16:35] 2025-11-29 18:16:05,310 | INFO     | update_server=False
[2025-11-29 19:16:35] 2025-11-29 18:16:05,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 19:16:35] 2025-11-29 18:16:05,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 19:16:35] 2025-11-29 18:16:05,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 19:16:35] 2025-11-29 18:16:05,740 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 19:16:35] 2025-11-29 18:16:05,740 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 19:16:35] 2025-11-29 18:16:05,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 19:16:35] 2025-11-29 18:16:05,740 | INFO     | will abort loop
[2025-11-29 19:16:35] 2025-11-29 18:16:05,746 | INFO     | [monitor] cgroup control has ended
[2025-11-29 19:16:35] 2025-11-29 18:16:05,821 | INFO     | all data control threads have been joined
[2025-11-29 19:16:35] 2025-11-29 18:16:06,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 19:16:35] 2025-11-29 18:16:06,316 | INFO     | [job] retrieve thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:06,316 | INFO     | [job] queue monitor thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:06,346 | INFO     | all payload control threads have been joined
[2025-11-29 19:16:35] 2025-11-29 18:16:06,528 | INFO     | [data] copytool_in thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:06,594 | INFO     | [payload] failed_post thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:06,595 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:06,624 | INFO     | all job control threads have been joined
[2025-11-29 19:16:35] 2025-11-29 18:16:06,746 | INFO     | [job] job monitor thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:06,827 | INFO     | [data] control thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:07,034 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:07,109 | INFO     | [job] validate thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:07,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:07,349 | INFO     | [payload] control thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:07,629 | INFO     | [job] control thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:07,651 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:07,735 | INFO     | [payload] validate_post thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:08,304 | INFO     | [data] copytool_out thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:09,317 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 19:16:35] 2025-11-29 18:16:11,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140448773076800)>', '<ExcThread(monitor, started 140448198792960)>']
[2025-11-29 19:16:35] 2025-11-29 18:16:16,439 | INFO     | all workflow threads have been joined
[2025-11-29 19:16:35] 2025-11-29 18:16:16,439 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 19:16:35] 2025-11-29 18:16:16,439 | INFO     | traces error code: 0
[2025-11-29 19:16:35] 2025-11-29 18:16:16,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 19:16:35] 2025-11-29 18:16:35,013 | INFO     | PID=4056378 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 19:16:35] 2025-11-29 18:16:35,013 | INFO     | .. there are 2 such processes running
[2025-11-29 19:16:35] 2025-11-29 18:16:35,014 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 19:16:35] 2025-11-29 18:16:35,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 19:16:35] 2025-11-29 18:16:35,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 19:16:35] 2025-11-29 18:16:35,014 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 19:16:35] 2025-11-29 18:16:35,014 | CRITICAL | thread 'MainThread' is not alive
[2025-11-29 19:16:35] 2025-11-29 18:16:35,014 | INFO     | [monitor] control thread has ended
[2025-11-29 19:16:35] 2025-11-29 18:16:35,127 [wrapper] ==== pilot stdout END ====
[2025-11-29 19:16:35] 2025-11-29 18:16:35,131 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 19:16:35] 2025-11-29 18:16:35,133 [wrapper] pilotpid: 4056378
[2025-11-29 19:16:35] 2025-11-29 18:16:35,136 [wrapper] Pilot exit status: 0
[2025-11-29 19:16:35] 2025-11-29 18:16:35,146 [wrapper] pandaids: 6899576220
[2025-11-29 19:16:35] 2025-11-29 18:16:35,185 [wrapper] cleanup supervisor_pilot  119964 4056379
[2025-11-29 19:16:35] 2025-11-29 18:16:35,188 [wrapper] Test setup, not cleaning
[2025-11-29 19:16:35] 2025-11-29 18:16:35,191 [wrapper] apfmon messages muted
[2025-11-29 19:16:35] 2025-11-29 18:16:35,193 [wrapper] ==== wrapper stdout END ====
[2025-11-29 19:16:35] 2025-11-29 18:16:35,196 [wrapper] ==== wrapper stderr END ====
[2025-11-29 19:16:35]  *** Error codes and diagnostics ***
[2025-11-29 19:16:35]     "exeErrorCode": 0,
[2025-11-29 19:16:35]     "exeErrorDiag": "",
[2025-11-29 19:16:35]     "pilotErrorCode": 0,
[2025-11-29 19:16:35]     "pilotErrorDiag": "",
[2025-11-29 19:16:35]  *** Listing of results directory ***
[2025-11-29 19:16:35] total 1316992
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc    576529 Nov 27 09:46 pilot3.tar.gz
[2025-11-29 19:16:35] -rwx------. 1 boinc boinc     36292 Nov 27 09:46 runpilot2-wrapper.sh
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc      5112 Nov 27 09:46 queuedata.json
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc       100 Nov 29 07:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 19:16:35] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 07:24 run_atlas
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc       105 Nov 29 07:24 job.xml
[2025-11-29 19:16:35] -rw-r--r--. 2 boinc boinc 409401879 Nov 29 07:24 EVNT.47483658._003384.pool.root.1
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc      6293 Nov 29 07:24 init_data.xml
[2025-11-29 19:16:35] -rw-r--r--. 2 boinc boinc     15847 Nov 29 07:24 start_atlas.sh
[2025-11-29 19:16:35] drwxrwx--x. 2 boinc boinc        68 Nov 29 07:24 shared
[2025-11-29 19:16:35] -rw-r--r--. 2 boinc boinc    590107 Nov 29 07:24 input.tar.gz
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc         0 Nov 29 07:24 boinc_lockfile
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc      2787 Nov 29 07:24 pandaJob.out
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc    991818 Nov 29 07:24 agis_schedconf.cvmfs.json
[2025-11-29 19:16:35] drwx------. 5 boinc boinc      4096 Nov 29 07:24 pilot3
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc       533 Nov 29 19:05 boinc_task_state.xml
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc 918683652 Nov 29 19:15 HITS.47556173._003408.pool.root.1
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc      1035 Nov 29 19:15 memory_monitor_summary.json
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc        95 Nov 29 19:15 pilot_heartbeat.json
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc   1516240 Nov 29 19:15 agis_ddmendpoints.agis.ALL.json
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc   2395702 Nov 29 19:15 log.47556173._003408.job.log.tgz.1
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc      8611 Nov 29 19:16 heartbeat.json
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc        29 Nov 29 19:16 wrapper_checkpoint.txt
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc      8192 Nov 29 19:16 boinc_mmap_file
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc       892 Nov 29 19:16 pilotlog.txt
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc   5912147 Nov 29 19:16 log.47556173._003408.job.log.1
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc       353 Nov 29 19:16 output.list
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc       620 Nov 29 19:16 runtime_log
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc   8325120 Nov 29 19:16 result.tar.gz
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc      8842 Nov 29 19:16 runtime_log.err
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc       665 Nov 29 19:16 qFaKDmEpmi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdlNKDm8BRe2m.diag
[2025-11-29 19:16:35] -rw-r--r--. 1 boinc boinc     21374 Nov 29 19:16 stderr.txt
[2025-11-29 19:16:35] HITS file was successfully produced:
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc 918683652 Nov 29 19:15 shared/HITS.pool.root.1
[2025-11-29 19:16:35]  *** Contents of shared directory: ***
[2025-11-29 19:16:35] total 1305692
[2025-11-29 19:16:35] -rw-r--r--. 2 boinc boinc 409401879 Nov 29 07:24 ATLAS.root_0
[2025-11-29 19:16:35] -rw-r--r--. 2 boinc boinc     15847 Nov 29 07:24 start_atlas.sh
[2025-11-29 19:16:35] -rw-r--r--. 2 boinc boinc    590107 Nov 29 07:24 input.tar.gz
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc 918683652 Nov 29 19:15 HITS.pool.root.1
[2025-11-29 19:16:35] -rw-------. 1 boinc boinc   8325120 Nov 29 19:16 result.tar.gz
19:16:37 (4052506): run_atlas exited; CPU time 494176.189542
19:16:37 (4052506): called boinc_finish(0)

</stderr_txt>
]]>

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