Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:15:56 (23112): wrapper (7.7.26015): starting
22:15:56 (23112): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 22:15:56] Arguments: --nthreads 8
[2025-11-30 22:15:56] Threads: 8
[2025-11-30 22:15:56] Checking for CVMFS
[2025-11-30 22:15:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 22:15:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 22:15:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 22:15:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 22:15:59] 2.11.2.0 11529 228819 139780 153494 2 15 15763031 25165825 2504 130560 9 95104835 99.894 42623392 2463 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-30 22:15:59] CVMFS is ok
[2025-11-30 22:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 22:15:59] Checking for apptainer binary...
[2025-11-30 22:15:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 22:15:59] Running /usr/bin/apptainer --version
[2025-11-30 22:15:59] apptainer version 1.3.2-1.el7
[2025-11-30 22:15:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 22:16:10] cg-vwn354.simple-grid.lan
[2025-11-30 22:16:10] apptainer works
[2025-11-30 22:16:10] Set ATHENA_PROC_NUMBER=8
[2025-11-30 22:16:10] Set ATHENA_CORE_NUMBER=8
[2025-11-30 22:16:10] Starting ATLAS job with PandaID=6901020837
[2025-11-30 22:16:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 22:04:03]  *** The last 200 lines of the pilot log: ***
[2025-12-01 22:04:03] 2025-12-01 21:03:06,078 | INFO     | PID=26905 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-01 22:04:03] 2025-12-01 21:03:06,078 | INFO     | .. there are 8 such processes running
[2025-12-01 22:04:03] 2025-12-01 21:03:06,379 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-01 22:04:03] 2025-12-01 21:03:06,380 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-01 22:04:03] 2025-12-01 21:03:06,382 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6901020837/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 22:04:03] 2025-12-01 21:03:06,383 | INFO     | extracted standard info from prmon json
[2025-12-01 22:04:03] 2025-12-01 21:03:06,383 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 22:04:03] 2025-12-01 21:03:06,383 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 22:04:03] 2025-12-01 21:03:06,410 | INFO     | fitting pss+swap vs Time
[2025-12-01 22:04:03] 2025-12-01 21:03:06,412 | INFO     | sum of square deviations: 834562953607.0765
[2025-12-01 22:04:03] 2025-12-01 21:03:06,475 | INFO     | sum of deviations: 3998054556927.447
[2025-12-01 22:04:03] 2025-12-01 21:03:06,476 | INFO     | mean x: 1764580542.1538463
[2025-12-01 22:04:03] 2025-12-01 21:03:06,476 | INFO     | mean y: 2866421.848310568
[2025-12-01 22:04:03] 2025-12-01 21:03:06,476 | INFO     | intersect: -8450527354.05757
[2025-12-01 22:04:03] 2025-12-01 21:03:06,478 | INFO     | chi2: 13.65071037422323
[2025-12-01 22:04:03] 2025-12-01 21:03:06,480 | INFO     | sum of square deviations: 825596140107.891
[2025-12-01 22:04:03] 2025-12-01 21:03:06,538 | INFO     | sum of deviations: 4477493235003.378
[2025-12-01 22:04:03] 2025-12-01 21:03:06,538 | INFO     | mean x: 1764580389.6580086
[2025-12-01 22:04:03] 2025-12-01 21:03:06,538 | INFO     | mean y: 2874575.448051948
[2025-12-01 22:04:03] 2025-12-01 21:03:06,539 | INFO     | intersect: -9567054804.649158
[2025-12-01 22:04:03] 2025-12-01 21:03:06,540 | INFO     | chi2: 10.381685016310279
[2025-12-01 22:04:03] 2025-12-01 21:03:06,540 | INFO     | current chi2=10.381685016310279 (change=23.947657435366033 %)
[2025-12-01 22:04:03] 2025-12-01 21:03:06,540 | INFO     | right removable region: 1385
[2025-12-01 22:04:03] 2025-12-01 21:03:06,542 | INFO     | sum of square deviations: 825595161057.8912
[2025-12-01 22:04:03] 2025-12-01 21:03:06,599 | INFO     | sum of deviations: 3411460213484.737
[2025-12-01 22:04:03] 2025-12-01 21:03:06,599 | INFO     | mean x: 1764580694.6580086
[2025-12-01 22:04:03] 2025-12-01 21:03:06,599 | INFO     | mean y: 2876396.533189033
[2025-12-01 22:04:03] 2025-12-01 21:03:06,600 | INFO     | intersect: -7288586922.601918
[2025-12-01 22:04:03] 2025-12-01 21:03:06,601 | INFO     | chi2: 8.930654608390611
[2025-12-01 22:04:03] 2025-12-01 21:03:06,601 | INFO     | current chi2=8.930654608390611 (change=34.577363642155554 %)
[2025-12-01 22:04:03] 2025-12-01 21:03:06,603 | INFO     | sum of square deviations: 816691834833.6669
[2025-12-01 22:04:03] 2025-12-01 21:03:06,658 | INFO     | sum of deviations: 2939155170978.207
[2025-12-01 22:04:03] 2025-12-01 21:03:06,658 | INFO     | mean x: 1764580847.1622014
[2025-12-01 22:04:03] 2025-12-01 21:03:06,658 | INFO     | mean y: 2884486.2490948588
[2025-12-01 22:04:03] 2025-12-01 21:03:06,659 | INFO     | intersect: -6347585422.14932
[2025-12-01 22:04:03] 2025-12-01 21:03:06,660 | INFO     | chi2: 6.0177803566146775
[2025-12-01 22:04:03] 2025-12-01 21:03:06,660 | INFO     | current chi2=6.0177803566146775 (change=32.61658164496926 %)
[2025-12-01 22:04:03] 2025-12-01 21:03:06,662 | INFO     | sum of square deviations: 807852910490.5508
[2025-12-01 22:04:03] 2025-12-01 21:03:06,718 | INFO     | sum of deviations: 2685360091660.4897
[2025-12-01 22:04:03] 2025-12-01 21:03:06,718 | INFO     | mean x: 1764580999.6649709
[2025-12-01 22:04:03] 2025-12-01 21:03:06,718 | INFO     | mean y: 2888860.9229651163
[2025-12-01 22:04:03] 2025-12-01 21:03:06,718 | INFO     | intersect: -5862702923.756394
[2025-12-01 22:04:03] 2025-12-01 21:03:06,720 | INFO     | chi2: 5.062804170230142
[2025-12-01 22:04:03] 2025-12-01 21:03:06,720 | INFO     | current chi2=5.062804170230142 (change=15.869242973197526 %)
[2025-12-01 22:04:03] 2025-12-01 21:03:06,720 | INFO     | left removable region: 30
[2025-12-01 22:04:03] 2025-12-01 21:03:06,722 | INFO     | sum of square deviations: 771427419464.278
[2025-12-01 22:04:03] 2025-12-01 21:03:06,777 | INFO     | sum of deviations: 3048581409168.171
[2025-12-01 22:04:03] 2025-12-01 21:03:06,777 | INFO     | mean x: 1764581274.1712177
[2025-12-01 22:04:03] 2025-12-01 21:03:06,778 | INFO     | mean y: 2902509.9992619925
[2025-12-01 22:04:03] 2025-12-01 21:03:06,778 | INFO     | intersect: -6970494509.179108
[2025-12-01 22:04:03] 2025-12-01 21:03:06,780 | INFO     | chi2: 1.0421974249435446
[2025-12-01 22:04:03] 2025-12-01 21:03:06,780 | INFO     | current memory leak: 3.95 B/s (using 1355 data points, chi2=1.04)
[2025-12-01 22:04:03] 2025-12-01 21:03:06,781 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-12-01 22:04:03] 2025-12-01 21:03:06,782 | INFO     | ..............................
[2025-12-01 22:04:03] 2025-12-01 21:03:06,782 | INFO     | . Timing measurements:
[2025-12-01 22:04:03] 2025-12-01 21:03:06,782 | INFO     | . get job = 0 s
[2025-12-01 22:04:03] 2025-12-01 21:03:06,782 | INFO     | . initial setup = 8 s
[2025-12-01 22:04:03] 2025-12-01 21:03:06,782 | INFO     | . payload setup = 157 s
[2025-12-01 22:04:03] 2025-12-01 21:03:06,782 | INFO     | . stage-in = 0 s
[2025-12-01 22:04:03] 2025-12-01 21:03:06,782 | INFO     | . payload execution = 84980 s
[2025-12-01 22:04:03] 2025-12-01 21:03:06,782 | INFO     | . stage-out = 4 s
[2025-12-01 22:04:03] 2025-12-01 21:03:06,782 | INFO     | . log creation = 1 s
[2025-12-01 22:04:03] 2025-12-01 21:03:06,783 | INFO     | ..............................
[2025-12-01 22:04:03] 2025-12-01 21:03:07,099 | INFO     | time since job start (85359s) is within the limit (172800.0s)
[2025-12-01 22:04:03] 2025-12-01 21:03:07,248 | INFO     | 
[2025-12-01 22:04:03] 2025-12-01 21:03:07,248 | INFO     | job summary report
[2025-12-01 22:04:03] 2025-12-01 21:03:07,249 | INFO     | --------------------------------------------------
[2025-12-01 22:04:03] 2025-12-01 21:03:07,249 | INFO     | PanDA job id: 6901020837
[2025-12-01 22:04:03] 2025-12-01 21:03:07,249 | INFO     | task id: 47556185
[2025-12-01 22:04:03] 2025-12-01 21:03:07,249 | INFO     | errors: (none)
[2025-12-01 22:04:03] 2025-12-01 21:03:07,249 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 22:04:03] 2025-12-01 21:03:07,249 | INFO     | pilot state: finished 
[2025-12-01 22:04:03] 2025-12-01 21:03:07,249 | INFO     | transexitcode: 0
[2025-12-01 22:04:03] 2025-12-01 21:03:07,249 | INFO     | exeerrorcode: 0
[2025-12-01 22:04:03] 2025-12-01 21:03:07,249 | INFO     | exeerrordiag: 
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | exitcode: 0
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | exitmsg: OK
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | cpuconsumptiontime: 321219 s
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | nevents: 1000
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | neventsw: 0
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | pid: 1089
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | pgrp: 1089
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | corecount: 8
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | event service: False
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | sizes: {0: 2284089, 1: 2284173, 2: 2284372, 13: 2284372, 23: 2284428, 34: 2284456, 45: 2284612, 56: 2284640, 66: 2284668, 77: 2284696, 88: 2284752, 97: 2285322, 99
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | --------------------------------------------------
[2025-12-01 22:04:03] 2025-12-01 21:03:07,250 | INFO     | 
[2025-12-01 22:04:03] 2025-12-01 21:03:07,251 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-12-01 22:04:03] 2025-12-01 21:03:07,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,279 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,279 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,279 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,280 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,280 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,280 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,280 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,280 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,280 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,281 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,281 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,281 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 22:04:03] 2025-12-01 21:03:07,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,281 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 22:04:03] 2025-12-01 21:03:07,281 | INFO     | job 6901020837 has completed (purged errors)
[2025-12-01 22:04:03] 2025-12-01 21:03:07,282 | INFO     | overall cleanup function is called
[2025-12-01 22:04:03] 2025-12-01 21:03:08,298 | INFO     | --- collectZombieJob: --- 10, [1089]
[2025-12-01 22:04:03] 2025-12-01 21:03:08,299 | INFO     | zombie collector waiting for pid 1089
[2025-12-01 22:04:03] 2025-12-01 21:03:08,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 22:04:03] 2025-12-01 21:03:08,299 | INFO     | collected zombie processes
[2025-12-01 22:04:03] 2025-12-01 21:03:08,299 | INFO     | will attempt to kill all subprocesses of pid=1089
[2025-12-01 22:04:03] 2025-12-01 21:03:08,402 | INFO     | process IDs to be killed: [1089] (in reverse order)
[2025-12-01 22:04:03] 2025-12-01 21:03:08,470 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 22:04:03] 2025-12-01 21:03:08,470 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 22:04:03] 2025-12-01 21:03:08,474 | INFO     | did not find any defunct processes belonging to 1089
[2025-12-01 22:04:03] 2025-12-01 21:03:08,477 | INFO     | did not find any defunct processes belonging to 1089
[2025-12-01 22:04:03] 2025-12-01 21:03:08,478 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 22:04:03] 2025-12-01 21:03:08,478 | INFO     | ready for new job
[2025-12-01 22:04:03] 2025-12-01 21:03:08,478 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 22:04:03] 2025-12-01 21:03:08,483 | INFO     | ***************************************
[2025-12-01 22:04:03] 2025-12-01 21:03:08,483 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 22:04:03] 2025-12-01 21:03:08,483 | INFO     | ***************************************
[2025-12-01 22:04:03] 2025-12-01 21:03:08,484 | INFO     | 
[2025-12-01 22:04:03] 2025-12-01 21:03:08,484 | INFO     | pilot is running in a VM
[2025-12-01 22:04:03] 2025-12-01 21:03:08,484 | INFO     | architecture information:
[2025-12-01 22:04:03] 2025-12-01 21:03:08,485 | INFO     | executing command: cat /etc/os-release
[2025-12-01 22:04:03] 2025-12-01 21:03:08,517 | INFO     | cat /etc/os-release:
[2025-12-01 22:04:03] NAME="CentOS Linux"
[2025-12-01 22:04:03] VERSION="7 (Core)"
[2025-12-01 22:04:03] ID="centos"
[2025-12-01 22:04:03] ID_LIKE="rhel fedora"
[2025-12-01 22:04:03] VERSION_ID="7"
[2025-12-01 22:04:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 22:04:03] ANSI_COLOR="0;31"
[2025-12-01 22:04:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 22:04:03] HOME_URL="https://www.centos.org/"
[2025-12-01 22:04:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 22:04:03] 
[2025-12-01 22:04:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 22:04:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 22:04:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 22:04:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 22:04:03] 
[2025-12-01 22:04:03] 2025-12-01 21:03:08,517 | INFO     | ***************************************
[2025-12-01 22:04:03] 2025-12-01 21:03:09,022 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-12-01 22:04:03] 2025-12-01 21:03:09,044 | INFO     | sufficient remaining disk space (489254027264 B)
[2025-12-01 22:04:03] 2025-12-01 21:03:09,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 22:04:03] 2025-12-01 21:03:09,045 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 22:04:03] 2025-12-01 21:03:09,045 | INFO     | update_server=False
[2025-12-01 22:04:03] 2025-12-01 21:03:09,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 22:04:03] 2025-12-01 21:03:09,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 22:04:03] 2025-12-01 21:03:09,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 22:04:03] 2025-12-01 21:03:09,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 22:04:03] 2025-12-01 21:03:09,046 | INFO     | aborting loop
[2025-12-01 22:04:03] 2025-12-01 21:03:09,046 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-12-01 22:04:03] 2025-12-01 21:03:09,047 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 22:04:03] 2025-12-01 21:03:09,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 22:04:03] 2025-12-01 21:03:09,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 22:04:03] 2025-12-01 21:03:09,148 | INFO     | all payload control threads have been joined
[2025-12-01 22:04:03] 2025-12-01 21:03:09,740 | INFO     | all data control threads have been joined
[2025-12-01 22:04:03] 2025-12-01 21:03:10,051 | INFO     | [job] queue monitor thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:10,052 | INFO     | [job] job monitor thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:10,052 | INFO     | [job] retrieve thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:10,063 | INFO     | all job control threads have been joined
[2025-12-01 22:04:03] 2025-12-01 21:03:10,154 | INFO     | [payload] control thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:10,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:10,538 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:10,746 | INFO     | [data] control thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:10,843 | INFO     | [job] validate thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:10,990 | INFO     | [payload] validate_post thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:11,053 | INFO     | [data] copytool_out thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:11,069 | INFO     | [job] control thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:11,134 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:11,252 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:11,303 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 22:04:03] 2025-12-01 21:03:11,346 | INFO     | [data] copytool_in thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:11,470 | INFO     | [payload] failed_post thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:15,314 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 22:04:03] 2025-12-01 21:03:57,786 | INFO     | [monitor] cgroup control has ended
[2025-12-01 22:04:03] 2025-12-01 21:03:57,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140562341201728)>', '<ExcThread(monitor, started 140561889601280)>']
[2025-12-01 22:04:03] 2025-12-01 21:03:58,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 22:04:03] 2025-12-01 21:03:58,304 | INFO     | [monitor] control thread has ended
[2025-12-01 22:04:03] 2025-12-01 21:04:03,007 | INFO     | all workflow threads have been joined
[2025-12-01 22:04:03] 2025-12-01 21:04:03,008 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 22:04:03] 2025-12-01 21:04:03,008 | INFO     | traces error code: 0
[2025-12-01 22:04:03] 2025-12-01 21:04:03,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 22:04:03] 2025-12-01 21:04:03,141 [wrapper] ==== pilot stdout END ====
[2025-12-01 22:04:03] 2025-12-01 21:04:03,144 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 22:04:03] 2025-12-01 21:04:03,146 [wrapper] pilotpid: 26905
[2025-12-01 22:04:03] 2025-12-01 21:04:03,151 [wrapper] Pilot exit status: 0
[2025-12-01 22:04:03] 2025-12-01 21:04:03,179 [wrapper] pandaids: 6901020837
[2025-12-01 22:04:03] 2025-12-01 21:04:03,228 [wrapper] cleanup supervisor_pilot 19967 26906
[2025-12-01 22:04:03] 2025-12-01 21:04:03,242 [wrapper] Test setup, not cleaning
[2025-12-01 22:04:03] 2025-12-01 21:04:03,244 [wrapper] apfmon messages muted
[2025-12-01 22:04:03] 2025-12-01 21:04:03,247 [wrapper] ==== wrapper stdout END ====
[2025-12-01 22:04:03] 2025-12-01 21:04:03,250 [wrapper] ==== wrapper stderr END ====
[2025-12-01 22:04:03]  *** Error codes and diagnostics ***
[2025-12-01 22:04:03]     "exeErrorCode": 0,
[2025-12-01 22:04:03]     "exeErrorDiag": "",
[2025-12-01 22:04:03]     "pilotErrorCode": 0,
[2025-12-01 22:04:03]     "pilotErrorDiag": "",
[2025-12-01 22:04:03]  *** Listing of results directory ***
[2025-12-01 22:04:03] total 1326704
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc    576529 Nov 28 01:58 pilot3.tar.gz
[2025-12-01 22:04:03] -rwx------. 1 boinc boinc     36292 Nov 28 02:01 runpilot2-wrapper.sh
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc      5112 Nov 28 02:04 queuedata.json
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc       100 Nov 30 22:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 22:04:03] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 22:15 run_atlas
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc       105 Nov 30 22:15 job.xml
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc      6393 Nov 30 22:15 init_data.xml
[2025-12-01 22:04:03] -rw-r--r--. 2 boinc boinc 408429764 Nov 30 22:15 EVNT.47483658._004545.pool.root.1
[2025-12-01 22:04:03] -rw-r--r--. 2 boinc boinc     15847 Nov 30 22:15 start_atlas.sh
[2025-12-01 22:04:03] drwxrwx--x. 2 boinc boinc        68 Nov 30 22:15 shared
[2025-12-01 22:04:03] -rw-r--r--. 2 boinc boinc    590107 Nov 30 22:15 input.tar.gz
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc         0 Nov 30 22:15 boinc_lockfile
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc      2787 Nov 30 22:16 pandaJob.out
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc    993245 Nov 30 22:20 agis_schedconf.cvmfs.json
[2025-12-01 22:04:03] drwx------. 5 boinc boinc      4096 Nov 30 22:20 pilot3
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc       533 Dec  1 21:48 boinc_task_state.xml
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc 918622742 Dec  1 22:02 HITS.47556185._003090.pool.root.1
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc        95 Dec  1 22:02 pilot_heartbeat.json
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc      1034 Dec  1 22:02 memory_monitor_summary.json
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc   1516240 Dec  1 22:02 agis_ddmendpoints.agis.ALL.json
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc   2471922 Dec  1 22:02 log.47556185._003090.job.log.tgz.1
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc      8628 Dec  1 22:03 heartbeat.json
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc      8192 Dec  1 22:03 boinc_mmap_file
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc        29 Dec  1 22:03 wrapper_checkpoint.txt
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc      4615 Dec  1 22:04 pilotlog.txt
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc  11317793 Dec  1 22:04 log.47556185._003090.job.log.1
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc       353 Dec  1 22:04 output.list
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc       620 Dec  1 22:04 runtime_log
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc  13813760 Dec  1 22:04 result.tar.gz
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc       662 Dec  1 22:04 SypMDmJ21i8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmT5KKDmrkAcwm.diag
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc      8817 Dec  1 22:04 runtime_log.err
[2025-12-01 22:04:03] -rw-r--r--. 1 boinc boinc     21003 Dec  1 22:04 stderr.txt
[2025-12-01 22:04:03] HITS file was successfully produced:
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc 918622742 Dec  1 22:02 shared/HITS.pool.root.1
[2025-12-01 22:04:03]  *** Contents of shared directory: ***
[2025-12-01 22:04:03] total 1310044
[2025-12-01 22:04:03] -rw-r--r--. 2 boinc boinc 408429764 Nov 30 22:15 ATLAS.root_0
[2025-12-01 22:04:03] -rw-r--r--. 2 boinc boinc     15847 Nov 30 22:15 start_atlas.sh
[2025-12-01 22:04:03] -rw-r--r--. 2 boinc boinc    590107 Nov 30 22:15 input.tar.gz
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc 918622742 Dec  1 22:02 HITS.pool.root.1
[2025-12-01 22:04:03] -rw-------. 1 boinc boinc  13813760 Dec  1 22:04 result.tar.gz
22:04:04 (23112): run_atlas exited; CPU time 321810.497609
22:04:04 (23112): called boinc_finish(0)

</stderr_txt>
]]>

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