Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:23:05 (3405): wrapper (7.7.26015): starting
16:23:05 (3405): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 16:23:05] Arguments: --nthreads 8
[2025-11-28 16:23:05] Threads: 8
[2025-11-28 16:23:05] Checking for CVMFS
[2025-11-28 16:23:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 16:23:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 16:23:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 16:23:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 16:23:05] 2.11.2.0 10816 121070 133888 153419 0 81 11409526 18432000 785 130560 0 87497020 99.975 5112387 28801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 16:23:05] CVMFS is ok
[2025-11-28 16:23:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 16:23:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 16:23:05] Further information can be found at the LHC@home message board.
[2025-11-28 16:23:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 16:23:05] Checking for apptainer binary...
[2025-11-28 16:23:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 16:23:05] Running /usr/bin/apptainer --version
[2025-11-28 16:23:05] apptainer version 1.3.2-1.el7
[2025-11-28 16:23:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 16:23:06] c-206-11.aglt2.org
[2025-11-28 16:23:06] apptainer works
[2025-11-28 16:23:06] Set ATHENA_PROC_NUMBER=8
[2025-11-28 16:23:06] Set ATHENA_CORE_NUMBER=8
[2025-11-28 16:23:06] Starting ATLAS job with PandaID=6900588795
[2025-11-28 16:23:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:13:13 (25211): wrapper (7.7.26015): starting
11:13:13 (25211): wrapper: running run_atlas (--nthreads 8)
[2025-11-29 11:13:13] Arguments: --nthreads 8
[2025-11-29 11:13:13] Threads: 8
[2025-11-29 11:13:13] This job has been restarted, cleaning up previous attempt
[2025-11-29 11:13:13] Checking for CVMFS
[2025-11-29 11:13:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 11:13:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 11:13:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 11:13:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 11:13:13] 2.11.2.0 10816 122200 136148 153447 3 57 11614648 18432000 1 130560 0 88450097 99.975 5147957 28837 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 11:13:13] CVMFS is ok
[2025-11-29 11:13:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 11:13:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 11:13:13] Further information can be found at the LHC@home message board.
[2025-11-29 11:13:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 11:13:13] Checking for apptainer binary...
[2025-11-29 11:13:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 11:13:13] Running /usr/bin/apptainer --version
[2025-11-29 11:13:13] apptainer version 1.3.2-1.el7
[2025-11-29 11:13:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 11:13:15] c-206-11.aglt2.org
[2025-11-29 11:13:15] apptainer works
[2025-11-29 11:13:15] Set ATHENA_PROC_NUMBER=8
[2025-11-29 11:13:15] Set ATHENA_CORE_NUMBER=8
[2025-11-29 11:13:15] Starting ATLAS job with PandaID=6900588795
[2025-11-29 11:13:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:31:09 (21698): wrapper (7.7.26015): starting
00:31:09 (21698): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 00:31:09] Arguments: --nthreads 8
[2025-11-30 00:31:09] Threads: 8
[2025-11-30 00:31:09] This job has been restarted, cleaning up previous attempt
[2025-11-30 00:31:09] Checking for CVMFS
[2025-11-30 00:31:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 00:31:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 00:31:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 00:31:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 00:31:09] 2.11.2.0 10816 122998 137944 153470 2 49 11715837 18432001 1 130560 0 89169465 99.975 5179613 28875 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 00:31:09] CVMFS is ok
[2025-11-30 00:31:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 00:31:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 00:31:09] Further information can be found at the LHC@home message board.
[2025-11-30 00:31:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 00:31:09] Checking for apptainer binary...
[2025-11-30 00:31:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 00:31:09] Running /usr/bin/apptainer --version
[2025-11-30 00:31:09] apptainer version 1.3.2-1.el7
[2025-11-30 00:31:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 00:31:11] c-206-11.aglt2.org
[2025-11-30 00:31:11] apptainer works
[2025-11-30 00:31:11] Set ATHENA_PROC_NUMBER=8
[2025-11-30 00:31:11] Set ATHENA_CORE_NUMBER=8
[2025-11-30 00:31:11] Starting ATLAS job with PandaID=6900588795
[2025-11-30 00:31:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:45:35 (19940): wrapper (7.7.26015): starting
01:45:35 (19940): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 01:45:35] Arguments: --nthreads 8
[2025-11-30 01:45:35] Threads: 8
[2025-11-30 01:45:35] This job has been restarted, cleaning up previous attempt
[2025-11-30 01:45:35] Checking for CVMFS
[2025-11-30 01:45:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 01:45:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 01:45:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 01:45:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 01:45:36] 2.11.2.0 10816 123072 135340 153471 3 56 11720575 18432001 1 130560 0 89411488 99.975 5180996 28876 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 01:45:36] CVMFS is ok
[2025-11-30 01:45:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 01:45:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 01:45:36] Further information can be found at the LHC@home message board.
[2025-11-30 01:45:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 01:45:36] Checking for apptainer binary...
[2025-11-30 01:45:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 01:45:36] Running /usr/bin/apptainer --version
[2025-11-30 01:45:36] apptainer version 1.3.2-1.el7
[2025-11-30 01:45:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 01:45:37] c-206-11.aglt2.org
[2025-11-30 01:45:37] apptainer works
[2025-11-30 01:45:37] Set ATHENA_PROC_NUMBER=8
[2025-11-30 01:45:37] Set ATHENA_CORE_NUMBER=8
[2025-11-30 01:45:37] Starting ATLAS job with PandaID=6900588795
[2025-11-30 01:45:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 21:06:50]  *** The last 200 lines of the pilot log: ***
[2025-11-30 21:06:50] 2025-12-01 02:05:57,519 | INFO     | time since job start (69608s) is within the limit (172800.0s)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,171 | INFO     | monitor loop #4970: job 0:6900588795 is in state 'finished'
[2025-11-30 21:06:50] 2025-12-01 02:05:58,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,689 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 21:06:50] 2025-12-01 02:05:58,695 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2145.0833333333335
[2025-11-30 21:06:50] 2025-12-01 02:05:58,698 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6900588795/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,699 | INFO     | extracted standard info from prmon json
[2025-11-30 21:06:50] 2025-12-01 02:05:58,699 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 21:06:50] 2025-12-01 02:05:58,699 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 21:06:50] 2025-12-01 02:05:58,716 | INFO     | fitting pss+swap vs Time
[2025-11-30 21:06:50] 2025-12-01 02:05:58,717 | INFO     | sum of square deviations: 460611078736.56274
[2025-11-30 21:06:50] 2025-12-01 02:05:58,743 | INFO     | sum of deviations: 1969399268463.3904
[2025-11-30 21:06:50] 2025-12-01 02:05:58,743 | INFO     | mean x: 1764519946.7756355
[2025-11-30 21:06:50] 2025-12-01 02:05:58,743 | INFO     | mean y: 2858981.567922875
[2025-11-30 21:06:50] 2025-12-01 02:05:58,743 | INFO     | intersect: -7541562880.582897
[2025-11-30 21:06:50] 2025-12-01 02:05:58,744 | INFO     | chi2: 6.720164676261856
[2025-11-30 21:06:50] 2025-12-01 02:05:58,745 | INFO     | sum of square deviations: 454582472828.5416
[2025-11-30 21:06:50] 2025-12-01 02:05:58,771 | INFO     | sum of deviations: 2271028326135.913
[2025-11-30 21:06:50] 2025-12-01 02:05:58,771 | INFO     | mean x: 1764519794.2790494
[2025-11-30 21:06:50] 2025-12-01 02:05:58,771 | INFO     | mean y: 2866607.404049296
[2025-11-30 21:06:50] 2025-12-01 02:05:58,771 | INFO     | intersect: -8812419230.390867
[2025-11-30 21:06:50] 2025-12-01 02:05:58,772 | INFO     | chi2: 4.53715403992851
[2025-11-30 21:06:50] 2025-12-01 02:05:58,772 | INFO     | current chi2=4.53715403992851 (change=32.48448128130786 %)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,773 | INFO     | sum of square deviations: 448606705120.49316
[2025-11-30 21:06:50] 2025-12-01 02:05:58,798 | INFO     | sum of deviations: 2466337555987.2114
[2025-11-30 21:06:50] 2025-12-01 02:05:58,798 | INFO     | mean x: 1764519641.7824934
[2025-11-30 21:06:50] 2025-12-01 02:05:58,798 | INFO     | mean y: 2871591.565870911
[2025-11-30 21:06:50] 2025-12-01 02:05:58,798 | INFO     | intersect: -9698055771.159056
[2025-11-30 21:06:50] 2025-12-01 02:05:58,799 | INFO     | chi2: 3.5923305390618854
[2025-11-30 21:06:50] 2025-12-01 02:05:58,799 | INFO     | current chi2=3.5923305390618854 (change=20.824144222388185 %)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,800 | INFO     | right removable region: 1130
[2025-11-30 21:06:50] 2025-12-01 02:05:58,801 | INFO     | sum of square deviations: 454582002336.0989
[2025-11-30 21:06:50] 2025-12-01 02:05:58,825 | INFO     | sum of deviations: 1690666134492.7112
[2025-11-30 21:06:50] 2025-12-01 02:05:58,825 | INFO     | mean x: 1764520099.278169
[2025-11-30 21:06:50] 2025-12-01 02:05:58,826 | INFO     | mean y: 2866022.3996478873
[2025-11-30 21:06:50] 2025-12-01 02:05:58,826 | INFO     | intersect: -6559677941.396907
[2025-11-30 21:06:50] 2025-12-01 02:05:58,827 | INFO     | chi2: 4.753396175853527
[2025-11-30 21:06:50] 2025-12-01 02:05:58,827 | INFO     | current chi2=4.753396175853527 (change=29.266671207562723 %)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,828 | INFO     | sum of square deviations: 448605972269.2961
[2025-11-30 21:06:50] 2025-12-01 02:05:58,852 | INFO     | sum of deviations: 1600366231713.0833
[2025-11-30 21:06:50] 2025-12-01 02:05:58,853 | INFO     | mean x: 1764520251.7780726
[2025-11-30 21:06:50] 2025-12-01 02:05:58,853 | INFO     | mean y: 2868326.4226348363
[2025-11-30 21:06:50] 2025-12-01 02:05:58,853 | INFO     | intersect: -6291917745.717157
[2025-11-30 21:06:50] 2025-12-01 02:05:58,854 | INFO     | chi2: 4.659245255230562
[2025-11-30 21:06:50] 2025-12-01 02:05:58,854 | INFO     | current chi2=4.659245255230562 (change=1.9807084690570445 %)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,854 | INFO     | left removable region: 20
[2025-11-30 21:06:50] 2025-12-01 02:05:58,855 | INFO     | sum of square deviations: 424079095769.6082
[2025-11-30 21:06:50] 2025-12-01 02:05:58,881 | INFO     | sum of deviations: 2004821640618.529
[2025-11-30 21:06:50] 2025-12-01 02:05:58,882 | INFO     | mean x: 1764520221.2837837
[2025-11-30 21:06:50] 2025-12-01 02:05:58,882 | INFO     | mean y: 2885591.445945946
[2025-11-30 21:06:50] 2025-12-01 02:05:58,882 | INFO     | intersect: -8338832640.42981
[2025-11-30 21:06:50] 2025-12-01 02:05:58,883 | INFO     | chi2: 1.27286321095062
[2025-11-30 21:06:50] 2025-12-01 02:05:58,883 | INFO     | current memory leak: 4.73 B/s (using 1110 data points, chi2=1.27)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,884 | INFO     | could have reported an average CPU frequency of 2585 MHz (41 samples)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,884 | INFO     | ..............................
[2025-11-30 21:06:50] 2025-12-01 02:05:58,884 | INFO     | . Timing measurements:
[2025-11-30 21:06:50] 2025-12-01 02:05:58,884 | INFO     | . get job = 0 s
[2025-11-30 21:06:50] 2025-12-01 02:05:58,884 | INFO     | . initial setup = 1 s
[2025-11-30 21:06:50] 2025-12-01 02:05:58,884 | INFO     | . payload setup = 7 s
[2025-11-30 21:06:50] 2025-12-01 02:05:58,884 | INFO     | . stage-in = 0 s
[2025-11-30 21:06:50] 2025-12-01 02:05:58,884 | INFO     | . payload execution = 69574 s
[2025-11-30 21:06:50] 2025-12-01 02:05:58,885 | INFO     | . stage-out = 3 s
[2025-11-30 21:06:50] 2025-12-01 02:05:58,885 | INFO     | . log creation = 0 s
[2025-11-30 21:06:50] 2025-12-01 02:05:58,885 | INFO     | ..............................
[2025-11-30 21:06:50] 2025-12-01 02:05:58,974 | INFO     | 
[2025-11-30 21:06:50] 2025-12-01 02:05:58,975 | INFO     | job summary report
[2025-11-30 21:06:50] 2025-12-01 02:05:58,975 | INFO     | --------------------------------------------------
[2025-11-30 21:06:50] 2025-12-01 02:05:58,975 | INFO     | PanDA job id: 6900588795
[2025-11-30 21:06:50] 2025-12-01 02:05:58,975 | INFO     | task id: 47556185
[2025-11-30 21:06:50] 2025-12-01 02:05:58,975 | INFO     | errors: (none)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 21:06:50] 2025-12-01 02:05:58,976 | INFO     | pilot state: finished 
[2025-11-30 21:06:50] 2025-12-01 02:05:58,976 | INFO     | transexitcode: 0
[2025-11-30 21:06:50] 2025-12-01 02:05:58,976 | INFO     | exeerrorcode: 0
[2025-11-30 21:06:50] 2025-12-01 02:05:58,976 | INFO     | exeerrordiag: 
[2025-11-30 21:06:50] 2025-12-01 02:05:58,976 | INFO     | exitcode: 0
[2025-11-30 21:06:50] 2025-12-01 02:05:58,976 | INFO     | exitmsg: OK
[2025-11-30 21:06:50] 2025-12-01 02:05:58,976 | INFO     | cpuconsumptiontime: 540170 s
[2025-11-30 21:06:50] 2025-12-01 02:05:58,977 | INFO     | nevents: 1000
[2025-11-30 21:06:50] 2025-12-01 02:05:58,977 | INFO     | neventsw: 0
[2025-11-30 21:06:50] 2025-12-01 02:05:58,977 | INFO     | pid: 17988
[2025-11-30 21:06:50] 2025-12-01 02:05:58,977 | INFO     | pgrp: 17988
[2025-11-30 21:06:50] 2025-12-01 02:05:58,977 | INFO     | corecount: 8
[2025-11-30 21:06:50] 2025-12-01 02:05:58,977 | INFO     | event service: False
[2025-11-30 21:06:50] 2025-12-01 02:05:58,978 | INFO     | sizes: {0: 2284084, 1: 2284339, 5: 2284601, 12: 2284657, 69584: 2340937, 69585: 2340936, 69589: 2350170, 69594: 2350456}
[2025-11-30 21:06:50] 2025-12-01 02:05:58,978 | INFO     | --------------------------------------------------
[2025-11-30 21:06:50] 2025-12-01 02:05:58,978 | INFO     | 
[2025-11-30 21:06:50] 2025-12-01 02:05:58,978 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-30 21:06:50] 2025-12-01 02:05:58,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,998 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,998 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,999 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 21:06:50] 2025-12-01 02:05:58,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:58,999 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 21:06:50] 2025-12-01 02:05:59,000 | INFO     | job 6900588795 has completed (purged errors)
[2025-11-30 21:06:50] 2025-12-01 02:05:59,000 | INFO     | overall cleanup function is called
[2025-11-30 21:06:50] 2025-12-01 02:06:00,012 | INFO     | --- collectZombieJob: --- 10, [17988]
[2025-11-30 21:06:50] 2025-12-01 02:06:00,013 | INFO     | zombie collector waiting for pid 17988
[2025-11-30 21:06:50] 2025-12-01 02:06:00,013 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 21:06:50] 2025-12-01 02:06:00,013 | INFO     | collected zombie processes
[2025-11-30 21:06:50] 2025-12-01 02:06:00,013 | INFO     | will attempt to kill all subprocesses of pid=17988
[2025-11-30 21:06:50] 2025-12-01 02:06:00,190 | INFO     | process IDs to be killed: [17988] (in reverse order)
[2025-11-30 21:06:50] 2025-12-01 02:06:00,236 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 21:06:50] 2025-12-01 02:06:00,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 21:06:50] 2025-12-01 02:06:00,239 | INFO     | did not find any defunct processes belonging to 17988
[2025-11-30 21:06:50] 2025-12-01 02:06:00,241 | INFO     | did not find any defunct processes belonging to 17988
[2025-11-30 21:06:50] 2025-12-01 02:06:00,243 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 21:06:50] 2025-12-01 02:06:00,243 | INFO     | ready for new job
[2025-11-30 21:06:50] 2025-12-01 02:06:00,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 21:06:50] 2025-12-01 02:06:00,247 | INFO     | ***************************************
[2025-11-30 21:06:50] 2025-12-01 02:06:00,247 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 21:06:50] 2025-12-01 02:06:00,247 | INFO     | ***************************************
[2025-11-30 21:06:50] 2025-12-01 02:06:00,248 | INFO     | 
[2025-11-30 21:06:50] 2025-12-01 02:06:00,248 | INFO     | architecture information:
[2025-11-30 21:06:50] 2025-12-01 02:06:00,249 | INFO     | executing command: cat /etc/os-release
[2025-11-30 21:06:50] 2025-12-01 02:06:00,260 | INFO     | cat /etc/os-release:
[2025-11-30 21:06:50] NAME="CentOS Linux"
[2025-11-30 21:06:50] VERSION="7 (Core)"
[2025-11-30 21:06:50] ID="centos"
[2025-11-30 21:06:50] ID_LIKE="rhel fedora"
[2025-11-30 21:06:50] VERSION_ID="7"
[2025-11-30 21:06:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 21:06:50] ANSI_COLOR="0;31"
[2025-11-30 21:06:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 21:06:50] HOME_URL="https://www.centos.org/"
[2025-11-30 21:06:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 21:06:50] 
[2025-11-30 21:06:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 21:06:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 21:06:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 21:06:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 21:06:50] 
[2025-11-30 21:06:50] 2025-12-01 02:06:00,260 | INFO     | ***************************************
[2025-11-30 21:06:50] 2025-12-01 02:06:00,763 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-30 21:06:50] 2025-12-01 02:06:00,778 | INFO     | sufficient remaining disk space (24699207680 B)
[2025-11-30 21:06:50] 2025-12-01 02:06:00,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 21:06:50] 2025-12-01 02:06:00,788 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 21:06:50] 2025-12-01 02:06:00,788 | INFO     | update_server=False
[2025-11-30 21:06:50] 2025-12-01 02:06:00,788 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 21:06:50] 2025-12-01 02:06:00,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 21:06:50] 2025-12-01 02:06:00,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 21:06:50] 2025-12-01 02:06:00,885 | INFO     | all data control threads have been joined
[2025-11-30 21:06:50] 2025-12-01 02:06:01,679 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 21:06:50] 2025-12-01 02:06:01,679 | INFO     | aborting loop
[2025-11-30 21:06:50] 2025-12-01 02:06:01,789 | INFO     | [job] retrieve thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:01,794 | INFO     | [job] queue monitor thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:01,890 | INFO     | [data] control thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:02,077 | INFO     | all job control threads have been joined
[2025-11-30 21:06:50] 2025-12-01 02:06:02,110 | INFO     | all payload control threads have been joined
[2025-11-30 21:06:50] 2025-12-01 02:06:02,148 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 21:06:50] 2025-12-01 02:06:02,260 | INFO     | [payload] failed_post thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:02,379 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:02,555 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:02,665 | INFO     | [job] validate thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:02,673 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:02,684 | INFO     | [job] job monitor thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:02,949 | INFO     | [data] copytool_in thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:03,082 | INFO     | [job] control thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:03,115 | INFO     | [payload] control thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:03,160 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:03,317 | INFO     | [payload] validate_post thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:04,151 | INFO     | [data] copytool_out thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:04,795 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 21:06:50] 2025-12-01 02:06:30,769 | INFO     | PID=31051 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-30 21:06:50] 2025-12-01 02:06:30,769 | INFO     | .. there are 3 such processes running
[2025-11-30 21:06:50] 2025-12-01 02:06:30,769 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 21:06:50] 2025-12-01 02:06:30,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 21:06:50] 2025-12-01 02:06:30,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 21:06:50] 2025-12-01 02:06:44,058 | INFO     | [monitor] cgroup control has ended
[2025-11-30 21:06:50] 2025-12-01 02:06:45,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907333510976)>', '<ExcThread(monitor, started 139907049699072)>']
[2025-11-30 21:06:50] 2025-12-01 02:06:45,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 21:06:50] 2025-12-01 02:06:45,838 | INFO     | [monitor] control thread has ended
[2025-11-30 21:06:50] 2025-12-01 02:06:50,556 | INFO     | all workflow threads have been joined
[2025-11-30 21:06:50] 2025-12-01 02:06:50,556 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 21:06:50] 2025-12-01 02:06:50,556 | INFO     | traces error code: 0
[2025-11-30 21:06:50] 2025-12-01 02:06:50,557 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 21:06:50] 2025-12-01 02:06:50,688 [wrapper] ==== pilot stdout END ====
[2025-11-30 21:06:50] 2025-12-01 02:06:50,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 21:06:50] 2025-12-01 02:06:50,693 [wrapper] pilotpid: 31051
[2025-11-30 21:06:50] 2025-12-01 02:06:50,695 [wrapper] Pilot exit status: 0
[2025-11-30 21:06:50] 2025-12-01 02:06:50,704 [wrapper] pandaids: 6900588795 6900588795 6900588795 6900588795
[2025-11-30 21:06:50] 2025-12-01 02:06:50,738 [wrapper] cleanup supervisor_pilot  4837 31052
[2025-11-30 21:06:50] 2025-12-01 02:06:50,740 [wrapper] Test setup, not cleaning
[2025-11-30 21:06:50] 2025-12-01 02:06:50,743 [wrapper] apfmon messages muted
[2025-11-30 21:06:50] 2025-12-01 02:06:50,745 [wrapper] ==== wrapper stdout END ====
[2025-11-30 21:06:50] 2025-12-01 02:06:50,747 [wrapper] ==== wrapper stderr END ====
[2025-11-30 21:06:50]  *** Error codes and diagnostics ***
[2025-11-30 21:06:50]     "exeErrorCode": 0,
[2025-11-30 21:06:50]     "exeErrorDiag": "",
[2025-11-30 21:06:50]     "pilotErrorCode": 0,
[2025-11-30 21:06:50]     "pilotErrorDiag": "",
[2025-11-30 21:06:50]  *** Listing of results directory ***
[2025-11-30 21:06:50] total 1728908
[2025-11-30 21:06:50] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas    576529 Nov 27 19:58 pilot3.tar.gz
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas      5112 Nov 27 19:59 queuedata.json
[2025-11-30 21:06:50] -rwx------ 1 boincer umatlas     36292 Nov 27 19:59 runpilot2-wrapper.sh
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas       100 Nov 28 16:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 21:06:50] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 16:23 run_atlas
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas       105 Nov 28 16:23 job.xml
[2025-11-30 21:06:50] -rw-r--r-- 3 boincer umatlas 410654017 Nov 28 16:23 EVNT.47483658._004434.pool.root.1
[2025-11-30 21:06:50] -rw-r--r-- 3 boincer umatlas 410654017 Nov 28 16:23 ATLAS.root_0
[2025-11-30 21:06:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 16:23 start_atlas.sh
[2025-11-30 21:06:50] drwxrwx--x 2 boincer umatlas      4096 Nov 28 16:23 shared
[2025-11-30 21:06:50] -rw-r--r-- 2 boincer umatlas    590109 Nov 28 16:23 input.tar.gz
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas         0 Nov 28 16:23 boinc_lockfile
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas      2785 Nov 30 01:45 pandaJob.out
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas        57 Nov 30 01:45 setup.sh.local
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas    991740 Nov 30 01:45 agis_schedconf.cvmfs.json
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas       535 Nov 30 20:46 boinc_task_state.xml
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas      5956 Nov 30 21:00 init_data.xml
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas 921276962 Nov 30 21:05 HITS.47556185._001971.pool.root.1
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas      1062 Nov 30 21:05 memory_monitor_summary.json
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas   1516240 Nov 30 21:05 agis_ddmendpoints.agis.ALL.json
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas   2303293 Nov 30 21:05 log.47556185._001971.job.log.tgz.1
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas        96 Nov 30 21:05 pilot_heartbeat.json
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas      8661 Nov 30 21:05 heartbeat.json
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas        31 Nov 30 21:06 wrapper_checkpoint.txt
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 21:06 boinc_mmap_file
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas      4821 Nov 30 21:06 pilotlog.txt
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas   9634030 Nov 30 21:06 log.47556185._001971.job.log.1
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas       353 Nov 30 21:06 output.list
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas       620 Nov 30 21:06 runtime_log
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas  11960320 Nov 30 21:06 result.tar.gz
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas      9428 Nov 30 21:06 runtime_log.err
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas      1043 Nov 30 21:06 eN7NDml01i8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWxKKDmez9EJn.diag
[2025-11-30 21:06:50] -rw-r--r-- 1 boincer umatlas     27762 Nov 30 21:06 stderr.txt
[2025-11-30 21:06:50] HITS file was successfully produced:
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas 921276962 Nov 30 21:05 shared/HITS.pool.root.1
[2025-11-30 21:06:50]  *** Contents of shared directory: ***
[2025-11-30 21:06:50] total 1313004
[2025-11-30 21:06:50] -rw-r--r-- 3 boincer umatlas 410654017 Nov 28 16:23 ATLAS.root_0
[2025-11-30 21:06:50] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 16:23 start_atlas.sh
[2025-11-30 21:06:50] -rw-r--r-- 2 boincer umatlas    590109 Nov 28 16:23 input.tar.gz
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas 921276962 Nov 30 21:05 HITS.pool.root.1
[2025-11-30 21:06:50] -rw------- 1 boincer umatlas  11960320 Nov 30 21:06 result.tar.gz
21:06:52 (19940): run_atlas exited; CPU time 539726.059649
21:06:52 (19940): called boinc_finish(0)

</stderr_txt>
]]>

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