Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:07:00 (3354538): wrapper (7.7.26015): starting
21:07:00 (3354538): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 21:07:00] Arguments: --nthreads 8
[2025-11-28 21:07:00] Threads: 8
[2025-11-28 21:07:00] Checking for CVMFS
[2025-11-28 21:07:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 21:07:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 21:07:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 21:07:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 21:07:02] 2.13.2.0 5678 36600 176100 153425 1 147 30981929 39288833 7348 16776704 0 29179883 99.770 20176385 38384 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 21:07:02] CVMFS is ok
[2025-11-28 21:07:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 21:07:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 21:07:02] Further information can be found at the LHC@home message board.
[2025-11-28 21:07:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 21:07:02] Checking for apptainer binary...
[2025-11-28 21:07:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 21:07:02] Running /usr/bin/apptainer --version
[2025-11-28 21:07:02] apptainer version 1.4.4-1.el9
[2025-11-28 21:07:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 21:07:03] c-210-21.aglt2.org
[2025-11-28 21:07:03] apptainer works
[2025-11-28 21:07:03] Set ATHENA_PROC_NUMBER=8
[2025-11-28 21:07:03] Set ATHENA_CORE_NUMBER=8
[2025-11-28 21:07:03] Starting ATLAS job with PandaID=6900369434
[2025-11-28 21:07:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 18:55:00]  *** The last 200 lines of the pilot log: ***
[2025-11-30 18:55:00] 2025-11-30 23:53:53,236 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1836000000008
[2025-11-30 18:55:00] 2025-11-30 23:53:53,243 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6900369434/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 18:55:00] 2025-11-30 23:53:53,244 | INFO     | extracted standard info from prmon json
[2025-11-30 18:55:00] 2025-11-30 23:53:53,244 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 18:55:00] 2025-11-30 23:53:53,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 18:55:00] 2025-11-30 23:53:53,294 | INFO     | fitting pss+swap vs Time
[2025-11-30 18:55:00] 2025-11-30 23:53:53,298 | INFO     | sum of square deviations: 6096325114160.506
[2025-11-30 18:55:00] 2025-11-30 23:53:53,529 | INFO     | sum of deviations: 10245007358803.709
[2025-11-30 18:55:00] 2025-11-30 23:53:53,530 | INFO     | mean x: 1764464510.297888
[2025-11-30 18:55:00] 2025-11-30 23:53:53,530 | INFO     | mean y: 3000848.526491293
[2025-11-30 18:55:00] 2025-11-30 23:53:53,530 | INFO     | intersect: -2962220256.6210694
[2025-11-30 18:55:00] 2025-11-30 23:53:53,534 | INFO     | chi2: 11.029578887414356
[2025-11-30 18:55:00] 2025-11-30 23:53:53,537 | INFO     | sum of square deviations: 6062508059918.515
[2025-11-30 18:55:00] 2025-11-30 23:53:53,799 | INFO     | sum of deviations: 11226186799404.021
[2025-11-30 18:55:00] 2025-11-30 23:53:53,799 | INFO     | mean x: 1764464357.804009
[2025-11-30 18:55:00] 2025-11-30 23:53:53,799 | INFO     | mean y: 3005273.0872308835
[2025-11-30 18:55:00] 2025-11-30 23:53:53,800 | INFO     | intersect: -3264323410.986222
[2025-11-30 18:55:00] 2025-11-30 23:53:53,804 | INFO     | chi2: 7.723528953180277
[2025-11-30 18:55:00] 2025-11-30 23:53:53,804 | INFO     | current chi2=7.723528953180277 (change=29.974398551213504 %)
[2025-11-30 18:55:00] 2025-11-30 23:53:53,808 | INFO     | sum of square deviations: 6028816310351.333
[2025-11-30 18:55:00] 2025-11-30 23:53:54,081 | INFO     | sum of deviations: 11711868746674.596
[2025-11-30 18:55:00] 2025-11-30 23:53:54,082 | INFO     | mean x: 1764464205.3101525
[2025-11-30 18:55:00] 2025-11-30 23:53:54,082 | INFO     | mean y: 3007469.8542208998
[2025-11-30 18:55:00] 2025-11-30 23:53:54,082 | INFO     | intersect: -3424725623.508799
[2025-11-30 18:55:00] 2025-11-30 23:53:54,086 | INFO     | chi2: 6.4921763210609775
[2025-11-30 18:55:00] 2025-11-30 23:53:54,086 | INFO     | current chi2=6.4921763210609775 (change=15.94287584838109 %)
[2025-11-30 18:55:00] 2025-11-30 23:53:54,086 | INFO     | right removable region: 2688
[2025-11-30 18:55:00] 2025-11-30 23:53:54,090 | INFO     | sum of square deviations: 6062502630308.519
[2025-11-30 18:55:00] 2025-11-30 23:53:54,543 | INFO     | sum of deviations: 9123875031060.906
[2025-11-30 18:55:00] 2025-11-30 23:53:54,543 | INFO     | mean x: 1764464662.804009
[2025-11-30 18:55:00] 2025-11-30 23:53:54,544 | INFO     | mean y: 3005903.3615441723
[2025-11-30 18:55:00] 2025-11-30 23:53:54,544 | INFO     | intersect: -2652457700.0130143
[2025-11-30 18:55:00] 2025-11-30 23:53:54,548 | INFO     | chi2: 6.906806330536161
[2025-11-30 18:55:00] 2025-11-30 23:53:54,548 | INFO     | current chi2=6.906806330536161 (change=37.37923812832612 %)
[2025-11-30 18:55:00] 2025-11-30 23:53:54,552 | INFO     | sum of square deviations: 6028805943538.191
[2025-11-30 18:55:00] 2025-11-30 23:53:54,588 | INFO     | PID=3358329 has CPU usage=17.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-30 18:55:00] 2025-11-30 23:53:54,588 | INFO     | .. there are 8 such processes running
[2025-11-30 18:55:00] 2025-11-30 23:53:54,763 | INFO     | sum of deviations: 8551002147648.566
[2025-11-30 18:55:00] 2025-11-30 23:53:54,764 | INFO     | mean x: 1764464815.3090367
[2025-11-30 18:55:00] 2025-11-30 23:53:54,764 | INFO     | mean y: 3008494.9728523614
[2025-11-30 18:55:00] 2025-11-30 23:53:54,764 | INFO     | intersect: -2499633415.6246347
[2025-11-30 18:55:00] 2025-11-30 23:53:54,768 | INFO     | chi2: 5.723958895327183
[2025-11-30 18:55:00] 2025-11-30 23:53:54,768 | INFO     | current chi2=5.723958895327183 (change=17.125823117109988 %)
[2025-11-30 18:55:00] 2025-11-30 23:53:54,768 | INFO     | left removable region: 20
[2025-11-30 18:55:00] 2025-11-30 23:53:54,772 | INFO     | sum of square deviations: 5888655429554.056
[2025-11-30 18:55:00] 2025-11-30 23:53:54,961 | INFO     | sum of deviations: 9559680714092.664
[2025-11-30 18:55:00] 2025-11-30 23:53:54,962 | INFO     | mean x: 1764464784.8290854
[2025-11-30 18:55:00] 2025-11-30 23:53:54,962 | INFO     | mean y: 3017306.56071964
[2025-11-30 18:55:00] 2025-11-30 23:53:54,962 | INFO     | intersect: -2861426058.4849496
[2025-11-30 18:55:00] 2025-11-30 23:53:54,966 | INFO     | chi2: 0.929782375328086
[2025-11-30 18:55:00] 2025-11-30 23:53:54,967 | INFO     | current memory leak: 1.62 B/s (using 2668 data points, chi2=0.93)
[2025-11-30 18:55:00] 2025-11-30 23:53:54,969 | INFO     | could have reported an average CPU frequency of 2590 MHz (93 samples)
[2025-11-30 18:55:00] 2025-11-30 23:53:54,970 | INFO     | ..............................
[2025-11-30 18:55:00] 2025-11-30 23:53:54,970 | INFO     | . Timing measurements:
[2025-11-30 18:55:00] 2025-11-30 23:53:54,970 | INFO     | . get job = 0 s
[2025-11-30 18:55:00] 2025-11-30 23:53:54,970 | INFO     | . initial setup = 3 s
[2025-11-30 18:55:00] 2025-11-30 23:53:54,970 | INFO     | . payload setup = 43 s
[2025-11-30 18:55:00] 2025-11-30 23:53:54,970 | INFO     | . stage-in = 0 s
[2025-11-30 18:55:00] 2025-11-30 23:53:54,970 | INFO     | . payload execution = 164623 s
[2025-11-30 18:55:00] 2025-11-30 23:53:54,971 | INFO     | . stage-out = 4 s
[2025-11-30 18:55:00] 2025-11-30 23:53:54,971 | INFO     | . log creation = 1 s
[2025-11-30 18:55:00] 2025-11-30 23:53:54,971 | INFO     | ..............................
[2025-11-30 18:55:00] 2025-11-30 23:53:55,091 | INFO     | 
[2025-11-30 18:55:00] 2025-11-30 23:53:55,091 | INFO     | job summary report
[2025-11-30 18:55:00] 2025-11-30 23:53:55,091 | INFO     | --------------------------------------------------
[2025-11-30 18:55:00] 2025-11-30 23:53:55,092 | INFO     | PanDA job id: 6900369434
[2025-11-30 18:55:00] 2025-11-30 23:53:55,092 | INFO     | task id: 47556173
[2025-11-30 18:55:00] 2025-11-30 23:53:55,092 | INFO     | errors: (none)
[2025-11-30 18:55:00] 2025-11-30 23:53:55,092 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 18:55:00] 2025-11-30 23:53:55,092 | INFO     | pilot state: finished 
[2025-11-30 18:55:00] 2025-11-30 23:53:55,092 | INFO     | transexitcode: 0
[2025-11-30 18:55:00] 2025-11-30 23:53:55,092 | INFO     | exeerrorcode: 0
[2025-11-30 18:55:00] 2025-11-30 23:53:55,092 | INFO     | exeerrordiag: 
[2025-11-30 18:55:00] 2025-11-30 23:53:55,092 | INFO     | exitcode: 0
[2025-11-30 18:55:00] 2025-11-30 23:53:55,093 | INFO     | exitmsg: OK
[2025-11-30 18:55:00] 2025-11-30 23:53:55,093 | INFO     | cpuconsumptiontime: 324635 s
[2025-11-30 18:55:00] 2025-11-30 23:53:55,093 | INFO     | nevents: 1000
[2025-11-30 18:55:00] 2025-11-30 23:53:55,093 | INFO     | neventsw: 0
[2025-11-30 18:55:00] 2025-11-30 23:53:55,093 | INFO     | pid: 3366418
[2025-11-30 18:55:00] 2025-11-30 23:53:55,093 | INFO     | pgrp: 3366418
[2025-11-30 18:55:00] 2025-11-30 23:53:55,093 | INFO     | corecount: 8
[2025-11-30 18:55:00] 2025-11-30 23:53:55,093 | INFO     | event service: False
[2025-11-30 18:55:00] 2025-11-30 23:53:55,093 | INFO     | sizes: {0: 2283489, 1: 2284174, 2: 2284373, 13: 2284373, 24: 2284429, 27: 2284719, 34: 2284875, 164670: 2388946, 164671: 2388945, 164676: 2397995, 164678: 2398051,
[2025-11-30 18:55:00] 2025-11-30 23:53:55,094 | INFO     | --------------------------------------------------
[2025-11-30 18:55:00] 2025-11-30 23:53:55,094 | INFO     | 
[2025-11-30 18:55:00] 2025-11-30 23:53:55,094 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 18:55:00] 2025-11-30 23:53:55,119 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,120 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,120 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,126 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 18:55:00] 2025-11-30 23:53:55,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,126 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 18:55:00] 2025-11-30 23:53:55,127 | INFO     | job 6900369434 has completed (purged errors)
[2025-11-30 18:55:00] 2025-11-30 23:53:55,127 | INFO     | overall cleanup function is called
[2025-11-30 18:55:00] 2025-11-30 23:53:56,160 | INFO     | --- collectZombieJob: --- 10, [3366418]
[2025-11-30 18:55:00] 2025-11-30 23:53:56,160 | INFO     | zombie collector waiting for pid 3366418
[2025-11-30 18:55:00] 2025-11-30 23:53:56,160 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 18:55:00] 2025-11-30 23:53:56,160 | INFO     | collected zombie processes
[2025-11-30 18:55:00] 2025-11-30 23:53:56,160 | INFO     | will attempt to kill all subprocesses of pid=3366418
[2025-11-30 18:55:00] 2025-11-30 23:53:56,540 | INFO     | process IDs to be killed: [3366418] (in reverse order)
[2025-11-30 18:55:00] 2025-11-30 23:53:56,721 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 18:55:00] 2025-11-30 23:53:56,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 18:55:00] 2025-11-30 23:53:56,795 | INFO     | did not find any defunct processes belonging to 3366418
[2025-11-30 18:55:00] 2025-11-30 23:53:56,812 | INFO     | did not find any defunct processes belonging to 3366418
[2025-11-30 18:55:00] 2025-11-30 23:53:56,818 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 18:55:00] 2025-11-30 23:53:56,818 | INFO     | ready for new job
[2025-11-30 18:55:00] 2025-11-30 23:53:56,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 18:55:00] 2025-11-30 23:53:56,840 | INFO     | ***************************************
[2025-11-30 18:55:00] 2025-11-30 23:53:56,840 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 18:55:00] 2025-11-30 23:53:56,840 | INFO     | ***************************************
[2025-11-30 18:55:00] 2025-11-30 23:53:56,840 | INFO     | 
[2025-11-30 18:55:00] 2025-11-30 23:53:56,842 | INFO     | architecture information:
[2025-11-30 18:55:00] 2025-11-30 23:53:56,847 | INFO     | executing command: cat /etc/os-release
[2025-11-30 18:55:00] 2025-11-30 23:53:56,907 | INFO     | cat /etc/os-release:
[2025-11-30 18:55:00] NAME="CentOS Linux"
[2025-11-30 18:55:00] VERSION="7 (Core)"
[2025-11-30 18:55:00] ID="centos"
[2025-11-30 18:55:00] ID_LIKE="rhel fedora"
[2025-11-30 18:55:00] VERSION_ID="7"
[2025-11-30 18:55:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 18:55:00] ANSI_COLOR="0;31"
[2025-11-30 18:55:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 18:55:00] HOME_URL="https://www.centos.org/"
[2025-11-30 18:55:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 18:55:00] 
[2025-11-30 18:55:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 18:55:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 18:55:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 18:55:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 18:55:00] 
[2025-11-30 18:55:00] 2025-11-30 23:53:56,907 | INFO     | ***************************************
[2025-11-30 18:55:00] 2025-11-30 23:53:57,411 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 18:55:00] 2025-11-30 23:53:57,453 | INFO     | sufficient remaining disk space (49823088640 B)
[2025-11-30 18:55:00] 2025-11-30 23:53:57,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 18:55:00] 2025-11-30 23:53:57,454 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 18:55:00] 2025-11-30 23:53:57,454 | INFO     | update_server=False
[2025-11-30 18:55:00] 2025-11-30 23:53:57,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 18:55:00] 2025-11-30 23:53:57,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 18:55:00] 2025-11-30 23:53:57,740 | INFO     | all data control threads have been joined
[2025-11-30 18:55:00] 2025-11-30 23:53:57,897 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 18:55:00] 2025-11-30 23:53:57,897 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 18:55:00] 2025-11-30 23:53:57,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 18:55:00] 2025-11-30 23:53:57,897 | INFO     | will abort loop
[2025-11-30 18:55:00] 2025-11-30 23:53:57,903 | INFO     | all job control threads have been joined
[2025-11-30 18:55:00] 2025-11-30 23:53:58,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 18:55:00] 2025-11-30 23:53:58,460 | INFO     | [job] retrieve thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:58,493 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:58,746 | INFO     | [data] control thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:58,864 | INFO     | [payload] validate_post thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:58,885 | INFO     | all payload control threads have been joined
[2025-11-30 18:55:00] 2025-11-30 23:53:58,902 | INFO     | [job] job monitor thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:58,903 | INFO     | [payload] failed_post thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:58,908 | INFO     | [job] control thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:58,950 | INFO     | [data] copytool_in thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:59,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:59,244 | INFO     | [job] validate thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:59,621 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:59,856 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:53:59,891 | INFO     | [payload] control thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:54:00,108 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 18:55:00] 2025-11-30 23:54:00,150 | INFO     | [data] copytool_out thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:54:01,114 | INFO     | [job] queue monitor thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:54:01,706 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 18:55:00] 2025-11-30 23:54:27,037 | INFO     | PID=3358329 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 18:55:00] 2025-11-30 23:54:27,038 | INFO     | .. there are 8 such processes running
[2025-11-30 18:55:00] 2025-11-30 23:54:27,038 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 18:55:00] 2025-11-30 23:54:27,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 18:55:00] 2025-11-30 23:54:27,038 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 18:55:00] 2025-11-30 23:54:54,328 | INFO     | [monitor] cgroup control has ended
[2025-11-30 18:55:00] 2025-11-30 23:54:54,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658864125760)>', '<ExcThread(monitor, started 140658591373056)>']
[2025-11-30 18:55:00] 2025-11-30 23:54:55,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 18:55:00] 2025-11-30 23:54:55,207 | INFO     | [monitor] control thread has ended
[2025-11-30 18:55:00] 2025-11-30 23:54:59,564 | INFO     | all workflow threads have been joined
[2025-11-30 18:55:00] 2025-11-30 23:54:59,564 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 18:55:00] 2025-11-30 23:54:59,564 | INFO     | traces error code: 0
[2025-11-30 18:55:00] 2025-11-30 23:54:59,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 18:55:00] 2025-11-30 23:54:59,883 [wrapper] ==== pilot stdout END ====
[2025-11-30 18:55:00] 2025-11-30 23:54:59,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 18:55:00] 2025-11-30 23:54:59,936 [wrapper] pilotpid: 3358329
[2025-11-30 18:55:00] 2025-11-30 23:54:59,962 [wrapper] Pilot exit status: 0
[2025-11-30 18:55:00] 2025-11-30 23:55:00,077 [wrapper] pandaids: 6900369434
[2025-11-30 18:55:00] 2025-11-30 23:55:00,155 [wrapper] cleanup supervisor_pilot 3155314 3358330
[2025-11-30 18:55:00] 2025-11-30 23:55:00,159 [wrapper] Test setup, not cleaning
[2025-11-30 18:55:00] 2025-11-30 23:55:00,163 [wrapper] apfmon messages muted
[2025-11-30 18:55:00] 2025-11-30 23:55:00,166 [wrapper] ==== wrapper stdout END ====
[2025-11-30 18:55:00] 2025-11-30 23:55:00,170 [wrapper] ==== wrapper stderr END ====
[2025-11-30 18:55:00]  *** Error codes and diagnostics ***
[2025-11-30 18:55:00]     "exeErrorCode": 0,
[2025-11-30 18:55:00]     "exeErrorDiag": "",
[2025-11-30 18:55:00]     "pilotErrorCode": 0,
[2025-11-30 18:55:00]     "pilotErrorDiag": "",
[2025-11-30 18:55:00]  *** Listing of results directory ***
[2025-11-30 18:55:00] total 1362104
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 27 19:58 pilot3.tar.gz
[2025-11-30 18:55:00] -rwx------. 1 boincer umatlas     36292 Nov 27 19:59 runpilot2-wrapper.sh
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 27 19:59 queuedata.json
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas       100 Nov 28 21:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 18:55:00] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 28 21:06 run_atlas
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas       105 Nov 28 21:06 job.xml
[2025-11-30 18:55:00] -rw-r--r--. 2 boincer umatlas 409098966 Nov 28 21:07 EVNT.47483658._003459.pool.root.1
[2025-11-30 18:55:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 21:07 start_atlas.sh
[2025-11-30 18:55:00] drwxrwx--x. 2 boincer umatlas      4096 Nov 28 21:07 shared
[2025-11-30 18:55:00] -rw-r--r--. 2 boincer umatlas    590102 Nov 28 21:07 input.tar.gz
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas         0 Nov 28 21:07 boinc_lockfile
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas      2788 Nov 28 21:07 pandaJob.out
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas        57 Nov 28 21:07 setup.sh.local
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas    991834 Nov 28 21:08 agis_schedconf.cvmfs.json
[2025-11-30 18:55:00] drwx------. 5 boincer umatlas      4096 Nov 28 21:08 pilot3
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas       534 Nov 30 18:41 boinc_task_state.xml
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas 930740442 Nov 30 18:52 HITS.47556173._004152.pool.root.1
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas      1080 Nov 30 18:53 memory_monitor_summary.json
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas   1516240 Nov 30 18:53 agis_ddmendpoints.agis.ALL.json
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas   3460673 Nov 30 18:53 log.47556173._004152.job.log.tgz.1
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas        95 Nov 30 18:53 pilot_heartbeat.json
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas      8672 Nov 30 18:53 heartbeat.json
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas      6663 Nov 30 18:54 init_data.xml
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas      8192 Nov 30 18:54 boinc_mmap_file
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas        30 Nov 30 18:54 wrapper_checkpoint.txt
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas      5009 Nov 30 18:54 pilotlog.txt
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas  22056938 Nov 30 18:55 log.47556173._004152.job.log.1
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas       353 Nov 30 18:55 output.list
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas       620 Nov 30 18:55 runtime_log
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas  25538560 Nov 30 18:55 result.tar.gz
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas       669 Nov 30 18:55 FVyLDmQ01i8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb7NKDmfAgTGn.diag
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas      9344 Nov 30 18:55 runtime_log.err
[2025-11-30 18:55:00] -rw-r--r--. 1 boincer umatlas     21457 Nov 30 18:55 stderr.txt
[2025-11-30 18:55:00] HITS file was successfully produced:
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas 930740442 Nov 30 18:52 shared/HITS.pool.root.1
[2025-11-30 18:55:00]  *** Contents of shared directory: ***
[2025-11-30 18:55:00] total 1333984
[2025-11-30 18:55:00] -rw-r--r--. 2 boincer umatlas 409098966 Nov 28 21:07 ATLAS.root_0
[2025-11-30 18:55:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 21:07 start_atlas.sh
[2025-11-30 18:55:00] -rw-r--r--. 2 boincer umatlas    590102 Nov 28 21:07 input.tar.gz
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas 930740442 Nov 30 18:52 HITS.pool.root.1
[2025-11-30 18:55:00] -rw-------. 1 boincer umatlas  25538560 Nov 30 18:55 result.tar.gz
18:55:01 (3354538): run_atlas exited; CPU time 327833.646776
18:55:01 (3354538): called boinc_finish(0)

</stderr_txt>
]]>

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