Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:17:01 (29463): wrapper (7.7.26015): starting
16:17:01 (29463): wrapper: running run_atlas (--nthreads 12)
[2025-11-28 16:17:01] Arguments: --nthreads 12
[2025-11-28 16:17:01] Threads: 12
[2025-11-28 16:17:01] Checking for CVMFS
[2025-11-28 16:17:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 16:17:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 16:17:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 16:17:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 16:17:02] 2.11.2.0 2924 291044 97492 153419 3 9 12221884 20275201 1 130560 4 132735202 99.966 17487944 14153 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 16:17:02] CVMFS is ok
[2025-11-28 16:17:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 16:17:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 16:17:02] Further information can be found at the LHC@home message board.
[2025-11-28 16:17:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 16:17:02] Checking for apptainer binary...
[2025-11-28 16:17:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 16:17:02] Running /usr/bin/apptainer --version
[2025-11-28 16:17:02] apptainer version 1.3.2-1.el7
[2025-11-28 16:17:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 16:17:03] c-205-28.aglt2.org
[2025-11-28 16:17:03] apptainer works
[2025-11-28 16:17:03] Set ATHENA_PROC_NUMBER=12
[2025-11-28 16:17:03] Set ATHENA_CORE_NUMBER=12
[2025-11-28 16:17:03] Starting ATLAS job with PandaID=6892525407
[2025-11-28 16:17:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 23:29:07]  *** The last 200 lines of the pilot log: ***
[2025-11-28 23:29:07] 2025-11-29 04:27:58,916 | INFO     | time since job start (25840s) is within the limit (172800.0s)
[2025-11-28 23:29:07] 2025-11-29 04:28:00,924 | INFO     | time since job start (25842s) is within the limit (172800.0s)
[2025-11-28 23:29:07] 2025-11-29 04:28:00,934 | INFO     | monitor loop #1936: job 0:6892525407 is in state 'finished'
[2025-11-28 23:29:07] 2025-11-29 04:28:00,934 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,592 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 23:29:07] 2025-11-29 04:28:02,595 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-28 23:29:07] 2025-11-29 04:28:02,597 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892525407/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,597 | INFO     | extracted standard info from prmon json
[2025-11-28 23:29:07] 2025-11-29 04:28:02,597 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 23:29:07] 2025-11-29 04:28:02,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 23:29:07] 2025-11-29 04:28:02,605 | INFO     | fitting pss+swap vs Time
[2025-11-28 23:29:07] 2025-11-29 04:28:02,605 | INFO     | sum of square deviations: 23469028931.111217
[2025-11-28 23:29:07] 2025-11-29 04:28:02,609 | INFO     | sum of deviations: 360112397142.55554
[2025-11-28 23:29:07] 2025-11-29 04:28:02,609 | INFO     | mean x: 1764377539.2222223
[2025-11-28 23:29:07] 2025-11-29 04:28:02,609 | INFO     | mean y: 3460863.3664302602
[2025-11-28 23:29:07] 2025-11-29 04:28:02,610 | INFO     | intersect: -27069420037.620808
[2025-11-28 23:29:07] 2025-11-29 04:28:02,610 | INFO     | chi2: 4.697800588500202
[2025-11-28 23:29:07] 2025-11-29 04:28:02,611 | INFO     | sum of square deviations: 22646614273.361324
[2025-11-28 23:29:07] 2025-11-29 04:28:02,614 | INFO     | sum of deviations: 500258159183.0026
[2025-11-28 23:29:07] 2025-11-29 04:28:02,615 | INFO     | mean x: 1764377386.7248805
[2025-11-28 23:29:07] 2025-11-29 04:28:02,615 | INFO     | mean y: 3486809.54784689
[2025-11-28 23:29:07] 2025-11-29 04:28:02,615 | INFO     | intersect: -38971177258.68503
[2025-11-28 23:29:07] 2025-11-29 04:28:02,615 | INFO     | chi2: 2.4072202958422064
[2025-11-28 23:29:07] 2025-11-29 04:28:02,615 | INFO     | current chi2=2.4072202958422064 (change=48.7585679618912 %)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,616 | INFO     | sum of square deviations: 21843641840.60546
[2025-11-28 23:29:07] 2025-11-29 04:28:02,619 | INFO     | sum of deviations: 514609390717.7151
[2025-11-28 23:29:07] 2025-11-29 04:28:02,620 | INFO     | mean x: 1764377234.227603
[2025-11-28 23:29:07] 2025-11-29 04:28:02,620 | INFO     | mean y: 3489504.4285714286
[2025-11-28 23:29:07] 2025-11-29 04:28:02,620 | INFO     | intersect: -41563072524.35568
[2025-11-28 23:29:07] 2025-11-29 04:28:02,620 | INFO     | chi2: 2.269401680082393
[2025-11-28 23:29:07] 2025-11-29 04:28:02,620 | INFO     | current chi2=2.269401680082393 (change=5.725218252681582 %)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,621 | INFO     | right removable region: 412
[2025-11-28 23:29:07] 2025-11-29 04:28:02,621 | INFO     | sum of square deviations: 22646556933.36132
[2025-11-28 23:29:07] 2025-11-29 04:28:02,625 | INFO     | sum of deviations: 229983081597.58844
[2025-11-28 23:29:07] 2025-11-29 04:28:02,625 | INFO     | mean x: 1764377691.7248805
[2025-11-28 23:29:07] 2025-11-29 04:28:02,625 | INFO     | mean y: 3484905.7703349283
[2025-11-28 23:29:07] 2025-11-29 04:28:02,625 | INFO     | intersect: -17914338975.31446
[2025-11-28 23:29:07] 2025-11-29 04:28:02,626 | INFO     | chi2: 2.5603542064688423
[2025-11-28 23:29:07] 2025-11-29 04:28:02,626 | INFO     | current chi2=2.5603542064688423 (change=45.498874244761225 %)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,626 | INFO     | sum of square deviations: 21843527160.605457
[2025-11-28 23:29:07] 2025-11-29 04:28:02,630 | INFO     | sum of deviations: 195942198900.10397
[2025-11-28 23:29:07] 2025-11-29 04:28:02,630 | INFO     | mean x: 1764377844.227603
[2025-11-28 23:29:07] 2025-11-29 04:28:02,630 | INFO     | mean y: 3491362.9031477
[2025-11-28 23:29:07] 2025-11-29 04:28:02,630 | INFO     | intersect: -15823443176.86644
[2025-11-28 23:29:07] 2025-11-29 04:28:02,631 | INFO     | chi2: 2.494073918870905
[2025-11-28 23:29:07] 2025-11-29 04:28:02,631 | INFO     | current chi2=2.494073918870905 (change=2.5887155546868255 %)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,631 | INFO     | left removable region: 20
[2025-11-28 23:29:07] 2025-11-29 04:28:02,632 | INFO     | sum of square deviations: 18678014324.87499
[2025-11-28 23:29:07] 2025-11-29 04:28:02,635 | INFO     | sum of deviations: 308959020386.14276
[2025-11-28 23:29:07] 2025-11-29 04:28:02,635 | INFO     | mean x: 1764377813.732143
[2025-11-28 23:29:07] 2025-11-29 04:28:02,635 | INFO     | mean y: 3529321.8775510206
[2025-11-28 23:29:07] 2025-11-29 04:28:02,635 | INFO     | intersect: -29181609496.425373
[2025-11-28 23:29:07] 2025-11-29 04:28:02,636 | INFO     | chi2: 0.02547420519206176
[2025-11-28 23:29:07] 2025-11-29 04:28:02,636 | INFO     | current memory leak: 16.54 B/s (using 392 data points, chi2=0.03)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,636 | INFO     | could have reported an average CPU frequency of 2421 MHz (18 samples)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,636 | INFO     | ..............................
[2025-11-28 23:29:07] 2025-11-29 04:28:02,636 | INFO     | . Timing measurements:
[2025-11-28 23:29:07] 2025-11-29 04:28:02,637 | INFO     | . get job = 0 s
[2025-11-28 23:29:07] 2025-11-29 04:28:02,637 | INFO     | . initial setup = 2 s
[2025-11-28 23:29:07] 2025-11-29 04:28:02,637 | INFO     | . payload setup = 7 s
[2025-11-28 23:29:07] 2025-11-29 04:28:02,637 | INFO     | . stage-in = 0 s
[2025-11-28 23:29:07] 2025-11-29 04:28:02,637 | INFO     | . payload execution = 25806 s
[2025-11-28 23:29:07] 2025-11-29 04:28:02,637 | INFO     | . stage-out = 3 s
[2025-11-28 23:29:07] 2025-11-29 04:28:02,637 | INFO     | . log creation = 0 s
[2025-11-28 23:29:07] 2025-11-29 04:28:02,637 | INFO     | ..............................
[2025-11-28 23:29:07] 2025-11-29 04:28:02,727 | INFO     | 
[2025-11-28 23:29:07] 2025-11-29 04:28:02,727 | INFO     | job summary report
[2025-11-28 23:29:07] 2025-11-29 04:28:02,727 | INFO     | --------------------------------------------------
[2025-11-28 23:29:07] 2025-11-29 04:28:02,727 | INFO     | PanDA job id: 6892525407
[2025-11-28 23:29:07] 2025-11-29 04:28:02,728 | INFO     | task id: 47493029
[2025-11-28 23:29:07] 2025-11-29 04:28:02,728 | INFO     | errors: (none)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 23:29:07] 2025-11-29 04:28:02,728 | INFO     | pilot state: finished 
[2025-11-28 23:29:07] 2025-11-29 04:28:02,728 | INFO     | transexitcode: 0
[2025-11-28 23:29:07] 2025-11-29 04:28:02,728 | INFO     | exeerrorcode: 0
[2025-11-28 23:29:07] 2025-11-29 04:28:02,729 | INFO     | exeerrordiag: 
[2025-11-28 23:29:07] 2025-11-29 04:28:02,729 | INFO     | exitcode: 0
[2025-11-28 23:29:07] 2025-11-29 04:28:02,729 | INFO     | exitmsg: OK
[2025-11-28 23:29:07] 2025-11-29 04:28:02,729 | INFO     | cpuconsumptiontime: 297147 s
[2025-11-28 23:29:07] 2025-11-29 04:28:02,729 | INFO     | nevents: 1000
[2025-11-28 23:29:07] 2025-11-29 04:28:02,729 | INFO     | neventsw: 0
[2025-11-28 23:29:07] 2025-11-29 04:28:02,730 | INFO     | pid: 7243
[2025-11-28 23:29:07] 2025-11-29 04:28:02,730 | INFO     | pgrp: 7243
[2025-11-28 23:29:07] 2025-11-29 04:28:02,730 | INFO     | corecount: 12
[2025-11-28 23:29:07] 2025-11-29 04:28:02,730 | INFO     | event service: False
[2025-11-28 23:29:07] 2025-11-29 04:28:02,730 | INFO     | sizes: {0: 2284300, 5: 2284562, 11: 2284618, 25817: 2321841, 25822: 2330891, 25828: 2331081}
[2025-11-28 23:29:07] 2025-11-29 04:28:02,730 | INFO     | --------------------------------------------------
[2025-11-28 23:29:07] 2025-11-29 04:28:02,731 | INFO     | 
[2025-11-28 23:29:07] 2025-11-29 04:28:02,731 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 23:29:07] 2025-11-29 04:28:02,756 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,757 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,757 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,758 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,758 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,758 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,759 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,760 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 23:29:07] 2025-11-29 04:28:02,760 | INFO     | job 6892525407 has completed (purged errors)
[2025-11-28 23:29:07] 2025-11-29 04:28:02,760 | INFO     | overall cleanup function is called
[2025-11-28 23:29:07] 2025-11-29 04:28:03,776 | INFO     | --- collectZombieJob: --- 10, [7243]
[2025-11-28 23:29:07] 2025-11-29 04:28:03,776 | INFO     | zombie collector waiting for pid 7243
[2025-11-28 23:29:07] 2025-11-29 04:28:03,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 23:29:07] 2025-11-29 04:28:03,777 | INFO     | collected zombie processes
[2025-11-28 23:29:07] 2025-11-29 04:28:03,777 | INFO     | will attempt to kill all subprocesses of pid=7243
[2025-11-28 23:29:07] 2025-11-29 04:28:03,868 | INFO     | process IDs to be killed: [7243] (in reverse order)
[2025-11-28 23:29:07] 2025-11-29 04:28:03,920 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 23:29:07] 2025-11-29 04:28:03,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 23:29:07] 2025-11-29 04:28:03,923 | INFO     | did not find any defunct processes belonging to 7243
[2025-11-28 23:29:07] 2025-11-29 04:28:03,925 | INFO     | did not find any defunct processes belonging to 7243
[2025-11-28 23:29:07] 2025-11-29 04:28:03,927 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 23:29:07] 2025-11-29 04:28:03,927 | INFO     | ready for new job
[2025-11-28 23:29:07] 2025-11-29 04:28:03,928 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 23:29:07] 2025-11-29 04:28:03,930 | INFO     | ***************************************
[2025-11-28 23:29:07] 2025-11-29 04:28:03,930 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 23:29:07] 2025-11-29 04:28:03,930 | INFO     | ***************************************
[2025-11-28 23:29:07] 2025-11-29 04:28:03,930 | INFO     | 
[2025-11-28 23:29:07] 2025-11-29 04:28:03,931 | INFO     | architecture information:
[2025-11-28 23:29:07] 2025-11-29 04:28:03,931 | INFO     | executing command: cat /etc/os-release
[2025-11-28 23:29:07] 2025-11-29 04:28:03,946 | INFO     | cat /etc/os-release:
[2025-11-28 23:29:07] NAME="CentOS Linux"
[2025-11-28 23:29:07] VERSION="7 (Core)"
[2025-11-28 23:29:07] ID="centos"
[2025-11-28 23:29:07] ID_LIKE="rhel fedora"
[2025-11-28 23:29:07] VERSION_ID="7"
[2025-11-28 23:29:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 23:29:07] ANSI_COLOR="0;31"
[2025-11-28 23:29:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 23:29:07] HOME_URL="https://www.centos.org/"
[2025-11-28 23:29:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 23:29:07] 
[2025-11-28 23:29:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 23:29:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 23:29:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 23:29:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 23:29:07] 
[2025-11-28 23:29:07] 2025-11-29 04:28:03,947 | INFO     | ***************************************
[2025-11-28 23:29:07] 2025-11-29 04:28:04,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 23:29:07] 2025-11-29 04:28:04,467 | INFO     | sufficient remaining disk space (28238151680 B)
[2025-11-28 23:29:07] 2025-11-29 04:28:04,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 23:29:07] 2025-11-29 04:28:04,468 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 23:29:07] 2025-11-29 04:28:04,468 | INFO     | update_server=False
[2025-11-28 23:29:07] 2025-11-29 04:28:04,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 23:29:07] 2025-11-29 04:28:04,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 23:29:07] 2025-11-29 04:28:04,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 23:29:07] 2025-11-29 04:28:04,469 | INFO     | aborting loop
[2025-11-28 23:29:07] 2025-11-29 04:28:04,777 | INFO     | all data control threads have been joined
[2025-11-28 23:29:07] 2025-11-29 04:28:04,856 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 23:29:07] 2025-11-29 04:28:04,921 | INFO     | all payload control threads have been joined
[2025-11-28 23:29:07] 2025-11-29 04:28:05,268 | INFO     | all job control threads have been joined
[2025-11-28 23:29:07] 2025-11-29 04:28:05,470 | INFO     | [job] queue monitor thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:05,473 | INFO     | [job] retrieve thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:05,474 | INFO     | [job] job monitor thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:05,782 | INFO     | [data] control thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:05,926 | INFO     | [payload] control thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:05,956 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:05,990 | INFO     | [payload] validate_post thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:06,250 | INFO     | [job] validate thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:06,274 | INFO     | [job] control thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:06,384 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:06,580 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:06,601 | INFO     | [data] copytool_in thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:06,626 | INFO     | [payload] failed_post thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:06,861 | INFO     | [data] copytool_out thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:06,879 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:07,437 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 23:29:07] 2025-11-29 04:28:11,443 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 23:29:07] 2025-11-29 04:28:34,117 | INFO     | PID=686 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-28 23:29:07] 2025-11-29 04:28:34,118 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 23:29:07] 2025-11-29 04:28:34,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 23:29:07] 2025-11-29 04:28:34,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 23:29:07] 2025-11-29 04:29:00,409 | INFO     | [monitor] cgroup control has ended
[2025-11-28 23:29:07] 2025-11-29 04:29:02,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047608727360)>', '<ExcThread(monitor, started 140047156221696)>']
[2025-11-28 23:29:07] 2025-11-29 04:29:03,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 23:29:07] 2025-11-29 04:29:03,250 | INFO     | [monitor] control thread has ended
[2025-11-28 23:29:07] 2025-11-29 04:29:07,395 | INFO     | all workflow threads have been joined
[2025-11-28 23:29:07] 2025-11-29 04:29:07,395 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 23:29:07] 2025-11-29 04:29:07,396 | INFO     | traces error code: 0
[2025-11-28 23:29:07] 2025-11-29 04:29:07,396 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 23:29:07] 2025-11-29 04:29:07,501 [wrapper] ==== pilot stdout END ====
[2025-11-28 23:29:07] 2025-11-29 04:29:07,505 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 23:29:07] 2025-11-29 04:29:07,509 [wrapper] pilotpid: 686
[2025-11-28 23:29:07] 2025-11-29 04:29:07,513 [wrapper] Pilot exit status: 0
[2025-11-28 23:29:07] 2025-11-29 04:29:07,528 [wrapper] pandaids: 6892525407
[2025-11-28 23:29:07] 2025-11-29 04:29:07,577 [wrapper] cleanup supervisor_pilot 10400 687
[2025-11-28 23:29:07] 2025-11-29 04:29:07,581 [wrapper] Test setup, not cleaning
[2025-11-28 23:29:07] 2025-11-29 04:29:07,585 [wrapper] apfmon messages muted
[2025-11-28 23:29:07] 2025-11-29 04:29:07,589 [wrapper] ==== wrapper stdout END ====
[2025-11-28 23:29:07] 2025-11-29 04:29:07,593 [wrapper] ==== wrapper stderr END ====
[2025-11-28 23:29:07]  *** Error codes and diagnostics ***
[2025-11-28 23:29:07]     "exeErrorCode": 0,
[2025-11-28 23:29:07]     "exeErrorDiag": "",
[2025-11-28 23:29:07]     "pilotErrorCode": 0,
[2025-11-28 23:29:07]     "pilotErrorDiag": "",
[2025-11-28 23:29:07]  *** Listing of results directory ***
[2025-11-28 23:29:07] total 1319720
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-28 23:29:07] -rwx------ 1 boincer umatlas     36292 Nov 19 02:09 runpilot2-wrapper.sh
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 02:10 queuedata.json
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas       100 Nov 28 16:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 23:29:07] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 16:16 run_atlas
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas       105 Nov 28 16:16 job.xml
[2025-11-28 23:29:07] -rw-r--r-- 2 boincer umatlas 410029688 Nov 28 16:17 EVNT.47493027._000091.pool.root.1
[2025-11-28 23:29:07] -rw-r--r-- 2 boincer umatlas     15120 Nov 28 16:17 start_atlas.sh
[2025-11-28 23:29:07] drwxrwx--x 2 boincer umatlas      4096 Nov 28 16:17 shared
[2025-11-28 23:29:07] -rw-r--r-- 2 boincer umatlas    590100 Nov 28 16:17 input.tar.gz
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas         0 Nov 28 16:17 boinc_lockfile
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas      2771 Nov 28 16:17 pandaJob.out
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas    991818 Nov 28 16:17 agis_schedconf.cvmfs.json
[2025-11-28 23:29:07] drwx------ 5 boincer umatlas      4096 Nov 28 16:17 pilot3
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas      5956 Nov 28 23:18 init_data.xml
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas       533 Nov 28 23:19 boinc_task_state.xml
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas 925854933 Nov 28 23:27 HITS.47493029._000867.pool.root.1
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas      1064 Nov 28 23:27 memory_monitor_summary.json
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas   1516240 Nov 28 23:27 agis_ddmendpoints.agis.ALL.json
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas   2183577 Nov 28 23:27 log.47493029._000867.job.log.tgz.1
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas      8661 Nov 28 23:28 heartbeat.json
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas        95 Nov 28 23:28 pilot_heartbeat.json
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 23:28 boinc_mmap_file
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas        29 Nov 28 23:28 wrapper_checkpoint.txt
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas      4744 Nov 28 23:29 pilotlog.txt
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas   3613812 Nov 28 23:29 log.47493029._000867.job.log.1
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas       353 Nov 28 23:29 output.list
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas       620 Nov 28 23:29 runtime_log
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas   5816320 Nov 28 23:29 result.tar.gz
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas      8706 Nov 28 23:29 runtime_log.err
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas       670 Nov 28 23:29 disMDmIVrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxhGKDmpcBQmn.diag
[2025-11-28 23:29:07] -rw-r--r-- 1 boincer umatlas     21281 Nov 28 23:29 stderr.txt
[2025-11-28 23:29:07] HITS file was successfully produced:
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas 925854933 Nov 28 23:27 shared/HITS.pool.root.1
[2025-11-28 23:29:07]  *** Contents of shared directory: ***
[2025-11-28 23:29:07] total 1310856
[2025-11-28 23:29:07] -rw-r--r-- 2 boincer umatlas 410029688 Nov 28 16:17 ATLAS.root_0
[2025-11-28 23:29:07] -rw-r--r-- 2 boincer umatlas     15120 Nov 28 16:17 start_atlas.sh
[2025-11-28 23:29:07] -rw-r--r-- 2 boincer umatlas    590100 Nov 28 16:17 input.tar.gz
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas 925854933 Nov 28 23:27 HITS.pool.root.1
[2025-11-28 23:29:07] -rw------- 1 boincer umatlas   5816320 Nov 28 23:29 result.tar.gz
23:29:08 (29463): run_atlas exited; CPU time 290483.698570
23:29:08 (29463): called boinc_finish(0)

</stderr_txt>
]]>

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