Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
08:33:02 (184674): wrapper (7.7.26015): starting
08:33:02 (184674): wrapper: running run_atlas (--nthreads 10)
[2025-12-01 08:33:02] Arguments: --nthreads 10
[2025-12-01 08:33:02] Threads: 10
[2025-12-01 08:33:02] Checking for CVMFS
[2025-12-01 08:33:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 08:33:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 08:33:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 08:33:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 08:33:03] 2.13.3.0 4125 53 56424 153525 2 108 3947970 4096000 8843 130560 0 2996602 99.942 229748 755 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-01 08:33:03] CVMFS is ok
[2025-12-01 08:33:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 08:33:03] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-01 08:33:03] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-01 08:33:03] Further information can be found at the LHC@home message board.
[2025-12-01 08:33:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 08:33:03] Checking for apptainer binary...
[2025-12-01 08:33:03] apptainer is not installed, using version from CVMFS
[2025-12-01 08:33:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 08:33:04] 7950x-linux
[2025-12-01 08:33:04] apptainer works
[2025-12-01 08:33:04] Set ATHENA_PROC_NUMBER=10
[2025-12-01 08:33:04] Set ATHENA_CORE_NUMBER=10
[2025-12-01 08:33:04] Starting ATLAS job with PandaID=6898686866
[2025-12-01 08:33:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc522/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 02:12:14]  *** The last 200 lines of the pilot log: ***
[2025-12-02 02:12:14] 2025-12-02 10:11:40,644 | INFO     | monitor loop #4592: job 0:6898686866 is in state 'finished'
[2025-12-02 02:12:14] 2025-12-02 10:11:40,644 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 02:12:14] 2025-12-02 10:11:40,785 | INFO     | time since job start (63497s) is within the limit (172800.0s)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,185 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 02:12:14] 2025-12-02 10:11:42,188 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.121437500001
[2025-12-02 02:12:14] 2025-12-02 10:11:42,192 | INFO     | using path: /var/lib/multiboinc/boinc522/slots/2/PanDA_Pilot-6898686866/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,192 | INFO     | extracted standard info from prmon json
[2025-12-02 02:12:14] 2025-12-02 10:11:42,192 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 02:12:14] 2025-12-02 10:11:42,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 02:12:14] 2025-12-02 10:11:42,202 | INFO     | fitting pss+swap vs Time
[2025-12-02 02:12:14] 2025-12-02 10:11:42,203 | INFO     | sum of square deviations: 349811831338.72156
[2025-12-02 02:12:14] 2025-12-02 10:11:42,220 | INFO     | sum of deviations: 2623442731672.8374
[2025-12-02 02:12:14] 2025-12-02 10:11:42,224 | INFO     | mean x: 1764638551.3496637
[2025-12-02 02:12:14] 2025-12-02 10:11:42,224 | INFO     | mean y: 3150652.6762728146
[2025-12-02 02:12:14] 2025-12-02 10:11:42,224 | INFO     | intersect: -13230901963.129341
[2025-12-02 02:12:14] 2025-12-02 10:11:42,224 | INFO     | chi2: 5.780948342711424
[2025-12-02 02:12:14] 2025-12-02 10:11:42,225 | INFO     | sum of square deviations: 344795643653.1078
[2025-12-02 02:12:14] 2025-12-02 10:11:42,237 | INFO     | sum of deviations: 2940551114928.512
[2025-12-02 02:12:14] 2025-12-02 10:11:42,237 | INFO     | mean x: 1764638398.8513513
[2025-12-02 02:12:14] 2025-12-02 10:11:42,237 | INFO     | mean y: 3160283.276061776
[2025-12-02 02:12:14] 2025-12-02 10:11:42,237 | INFO     | intersect: -15046361097.593145
[2025-12-02 02:12:14] 2025-12-02 10:11:42,237 | INFO     | chi2: 3.3009549078143947
[2025-12-02 02:12:14] 2025-12-02 10:11:42,237 | INFO     | current chi2=3.3009549078143947 (change=42.89942216874825 %)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,238 | INFO     | sum of square deviations: 339827642917.4876
[2025-12-02 02:12:14] 2025-12-02 10:11:42,249 | INFO     | sum of deviations: 2979847605792.5894
[2025-12-02 02:12:14] 2025-12-02 10:11:42,250 | INFO     | mean x: 1764638246.3530552
[2025-12-02 02:12:14] 2025-12-02 10:11:42,250 | INFO     | mean y: 3161484.462657614
[2025-12-02 02:12:14] 2025-12-02 10:11:42,250 | INFO     | intersect: -15470426856.795233
[2025-12-02 02:12:14] 2025-12-02 10:11:42,250 | INFO     | chi2: 3.1186391154795627
[2025-12-02 02:12:14] 2025-12-02 10:11:42,250 | INFO     | current chi2=3.1186391154795627 (change=5.523122775874137 %)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,250 | INFO     | right removable region: 1030
[2025-12-02 02:12:14] 2025-12-02 10:11:42,251 | INFO     | sum of square deviations: 344795421613.10785
[2025-12-02 02:12:14] 2025-12-02 10:11:42,262 | INFO     | sum of deviations: 2275300837841.916
[2025-12-02 02:12:14] 2025-12-02 10:11:42,263 | INFO     | mean x: 1764638703.8513513
[2025-12-02 02:12:14] 2025-12-02 10:11:42,263 | INFO     | mean y: 3161226.9864864866
[2025-12-02 02:12:14] 2025-12-02 10:11:42,263 | INFO     | intersect: -11641668343.478476
[2025-12-02 02:12:14] 2025-12-02 10:11:42,263 | INFO     | chi2: 3.166553579918917
[2025-12-02 02:12:14] 2025-12-02 10:11:42,263 | INFO     | current chi2=3.166553579918917 (change=45.22432320449146 %)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,264 | INFO     | sum of square deviations: 339827198837.4876
[2025-12-02 02:12:14] 2025-12-02 10:11:42,275 | INFO     | sum of deviations: 2162763612639.482
[2025-12-02 02:12:14] 2025-12-02 10:11:42,275 | INFO     | mean x: 1764638856.3530552
[2025-12-02 02:12:14] 2025-12-02 10:11:42,276 | INFO     | mean y: 3164680.9107662463
[2025-12-02 02:12:14] 2025-12-02 10:11:42,276 | INFO     | intersect: -11227533512.247295
[2025-12-02 02:12:14] 2025-12-02 10:11:42,276 | INFO     | chi2: 3.027363731201948
[2025-12-02 02:12:14] 2025-12-02 10:11:42,276 | INFO     | current chi2=3.027363731201948 (change=4.395625881704892 %)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,276 | INFO     | left removable region: 20
[2025-12-02 02:12:14] 2025-12-02 10:11:42,277 | INFO     | sum of square deviations: 319482104691.31573
[2025-12-02 02:12:14] 2025-12-02 10:11:42,288 | INFO     | sum of deviations: 2349311351761.115
[2025-12-02 02:12:14] 2025-12-02 10:11:42,288 | INFO     | mean x: 1764638825.8603961
[2025-12-02 02:12:14] 2025-12-02 10:11:42,288 | INFO     | mean y: 3180862.9653465347
[2025-12-02 02:12:14] 2025-12-02 10:11:42,288 | INFO     | intersect: -12973089057.873583
[2025-12-02 02:12:14] 2025-12-02 10:11:42,288 | INFO     | chi2: 0.2433059782675126
[2025-12-02 02:12:14] 2025-12-02 10:11:42,288 | INFO     | current memory leak: 7.35 B/s (using 1010 data points, chi2=0.24)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | could have reported an average CPU frequency of 4000 MHz (39 samples)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | ..............................
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | . Timing measurements:
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | . get job = 0 s
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | . initial setup = 8 s
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | . payload setup = 6 s
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | . stage-in = 0 s
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | . payload execution = 63462 s
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | . stage-out = 3 s
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | . log creation = 0 s
[2025-12-02 02:12:14] 2025-12-02 10:11:42,289 | INFO     | ..............................
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | 
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | job summary report
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | --------------------------------------------------
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | PanDA job id: 6898686866
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | task id: 47556161
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | errors: (none)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | pilot state: finished 
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | transexitcode: 0
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | exeerrorcode: 0
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | exeerrordiag: 
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | exitcode: 0
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | exitmsg: OK
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | cpuconsumptiontime: 135126 s
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | nevents: 1000
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | neventsw: 0
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | pid: 215970
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | pgrp: 215970
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | corecount: 10
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | event service: False
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | sizes: {0: 2284103, 1: 2284358, 6: 2284620, 12: 2284648, 63472: 2339100, 63473: 2339099, 63478: 2348389, 63483: 2348579}
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | --------------------------------------------------
[2025-12-02 02:12:14] 2025-12-02 10:11:42,445 | INFO     | 
[2025-12-02 02:12:14] 2025-12-02 10:11:42,446 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc522/slots/2
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,462 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,462 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 02:12:14] 2025-12-02 10:11:42,462 | INFO     | job 6898686866 has completed (purged errors)
[2025-12-02 02:12:14] 2025-12-02 10:11:42,462 | INFO     | overall cleanup function is called
[2025-12-02 02:12:14] 2025-12-02 10:11:43,475 | INFO     | --- collectZombieJob: --- 10, [215970]
[2025-12-02 02:12:14] 2025-12-02 10:11:43,475 | INFO     | zombie collector waiting for pid 215970
[2025-12-02 02:12:14] 2025-12-02 10:11:43,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 02:12:14] 2025-12-02 10:11:43,475 | INFO     | collected zombie processes
[2025-12-02 02:12:14] 2025-12-02 10:11:43,475 | INFO     | will attempt to kill all subprocesses of pid=215970
[2025-12-02 02:12:14] 2025-12-02 10:11:43,762 | INFO     | process IDs to be killed: [215970] (in reverse order)
[2025-12-02 02:12:14] 2025-12-02 10:11:43,909 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 02:12:14] 2025-12-02 10:11:43,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 02:12:14] 2025-12-02 10:11:43,915 | INFO     | did not find any defunct processes belonging to 215970
[2025-12-02 02:12:14] 2025-12-02 10:11:43,921 | INFO     | did not find any defunct processes belonging to 215970
[2025-12-02 02:12:14] 2025-12-02 10:11:43,921 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 02:12:14] 2025-12-02 10:11:43,921 | INFO     | ready for new job
[2025-12-02 02:12:14] 2025-12-02 10:11:43,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 02:12:14] 2025-12-02 10:11:43,924 | INFO     | ***************************************
[2025-12-02 02:12:14] 2025-12-02 10:11:43,924 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 02:12:14] 2025-12-02 10:11:43,924 | INFO     | ***************************************
[2025-12-02 02:12:14] 2025-12-02 10:11:43,924 | INFO     | 
[2025-12-02 02:12:14] 2025-12-02 10:11:43,925 | INFO     | architecture information:
[2025-12-02 02:12:14] 2025-12-02 10:11:43,926 | INFO     | executing command: cat /etc/os-release
[2025-12-02 02:12:14] 2025-12-02 10:11:43,952 | INFO     | cat /etc/os-release:
[2025-12-02 02:12:14] NAME="CentOS Linux"
[2025-12-02 02:12:14] VERSION="7 (Core)"
[2025-12-02 02:12:14] ID="centos"
[2025-12-02 02:12:14] ID_LIKE="rhel fedora"
[2025-12-02 02:12:14] VERSION_ID="7"
[2025-12-02 02:12:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 02:12:14] ANSI_COLOR="0;31"
[2025-12-02 02:12:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 02:12:14] HOME_URL="https://www.centos.org/"
[2025-12-02 02:12:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 02:12:14] 
[2025-12-02 02:12:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 02:12:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 02:12:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 02:12:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 02:12:14] 
[2025-12-02 02:12:14] 2025-12-02 10:11:43,952 | INFO     | ***************************************
[2025-12-02 02:12:14] 2025-12-02 10:11:44,454 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc522/slots/2
[2025-12-02 02:12:14] 2025-12-02 10:11:44,478 | INFO     | sufficient remaining disk space (174590001152 B)
[2025-12-02 02:12:14] 2025-12-02 10:11:44,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 02:12:14] 2025-12-02 10:11:44,478 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 02:12:14] 2025-12-02 10:11:44,478 | INFO     | update_server=False
[2025-12-02 02:12:14] 2025-12-02 10:11:44,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 02:12:14] 2025-12-02 10:11:44,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 02:12:14] 2025-12-02 10:11:44,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 02:12:14] 2025-12-02 10:11:44,479 | INFO     | aborting loop
[2025-12-02 02:12:14] 2025-12-02 10:11:44,717 | INFO     | all payload control threads have been joined
[2025-12-02 02:12:14] 2025-12-02 10:11:44,743 | INFO     | all data control threads have been joined
[2025-12-02 02:12:14] 2025-12-02 10:11:45,126 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 02:12:14] 2025-12-02 10:11:45,242 | INFO     | all job control threads have been joined
[2025-12-02 02:12:14] 2025-12-02 10:11:45,483 | INFO     | [job] retrieve thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:45,484 | INFO     | [job] job monitor thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:45,722 | INFO     | [payload] control thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:45,748 | INFO     | [data] control thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:45,886 | INFO     | [payload] validate_post thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:45,972 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:46,077 | INFO     | [job] validate thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:46,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:46,247 | INFO     | [job] control thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:46,347 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:46,502 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:46,681 | INFO     | [data] copytool_in thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:46,910 | INFO     | [payload] failed_post thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:47,135 | INFO     | [data] copytool_out thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:47,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 02:12:14] 2025-12-02 10:11:48,359 | INFO     | [job] queue monitor thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:11:48,484 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 02:12:14] 2025-12-02 10:12:08,917 | INFO     | [monitor] cgroup control has ended
[2025-12-02 02:12:14] 2025-12-02 10:12:09,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130071123269440)>', '<ExcThread(monitor, started 130070324700928)>']
[2025-12-02 02:12:14] 2025-12-02 10:12:14,094 | INFO     | all workflow threads have been joined
[2025-12-02 02:12:14] 2025-12-02 10:12:14,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 02:12:14] 2025-12-02 10:12:14,094 | INFO     | traces error code: 0
[2025-12-02 02:12:14] 2025-12-02 10:12:14,094 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 02:12:14] 2025-12-02 10:12:14,196 | INFO     | PID=196063 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-02 02:12:14] 2025-12-02 10:12:14,196 | INFO     | .. there are 14 such processes running
[2025-12-02 02:12:14] 2025-12-02 10:12:14,197 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 02:12:14] 2025-12-02 10:12:14,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 02:12:14] 2025-12-02 10:12:14,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 02:12:14] 2025-12-02 10:12:14,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 02:12:14] 2025-12-02 10:12:14,197 | INFO     | [monitor] control thread has ended
[2025-12-02 02:12:14] 2025-12-02 10:12:14,285 [wrapper] ==== pilot stdout END ====
[2025-12-02 02:12:14] 2025-12-02 10:12:14,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 02:12:14] 2025-12-02 10:12:14,288 [wrapper] pilotpid: 196063
[2025-12-02 02:12:14] 2025-12-02 10:12:14,289 [wrapper] Pilot exit status: 0
[2025-12-02 02:12:14] 2025-12-02 10:12:14,298 [wrapper] pandaids: 6898686866
[2025-12-02 02:12:14] 2025-12-02 10:12:14,344 [wrapper] cleanup supervisor_pilot 1656882 196064
[2025-12-02 02:12:14] 2025-12-02 10:12:14,346 [wrapper] Test setup, not cleaning
[2025-12-02 02:12:14] 2025-12-02 10:12:14,348 [wrapper] apfmon messages muted
[2025-12-02 02:12:14] 2025-12-02 10:12:14,351 [wrapper] ==== wrapper stdout END ====
[2025-12-02 02:12:14] 2025-12-02 10:12:14,358 [wrapper] ==== wrapper stderr END ====
[2025-12-02 02:12:14]  *** Error codes and diagnostics ***
[2025-12-02 02:12:14]     "exeErrorCode": 0,
[2025-12-02 02:12:14]     "exeErrorDiag": "",
[2025-12-02 02:12:14]     "pilotErrorCode": 0,
[2025-12-02 02:12:14]     "pilotErrorDiag": "",
[2025-12-02 02:12:14]  *** Listing of results directory ***
[2025-12-02 02:12:14] total 1317360
[2025-12-02 02:12:14] -rw-r--r-- 1 root root    576529 Nov 26 08:12 pilot3.tar.gz
[2025-12-02 02:12:14] -rwx------ 1 4871 1028     36292 Nov 26 08:36 runpilot2-wrapper.sh
[2025-12-02 02:12:14] -rw-r--r-- 1 root root      5112 Nov 26 08:37 queuedata.json
[2025-12-02 02:12:14] -rw-r--r-- 1 root root       100 Dec  1 08:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 02:12:14] -rwxr-xr-x 1 root root      7986 Dec  1 08:33 run_atlas
[2025-12-02 02:12:14] -rw-r--r-- 1 root root       105 Dec  1 08:33 job.xml
[2025-12-02 02:12:14] -rw-r--r-- 1 root root      7071 Dec  1 08:33 init_data.xml
[2025-12-02 02:12:14] -rw-r--r-- 2 root root 411135613 Dec  1 08:33 EVNT.47483658._002660.pool.root.1
[2025-12-02 02:12:14] -rw-r--r-- 2 root root    590111 Dec  1 08:33 input.tar.gz
[2025-12-02 02:12:14] -rw-r--r-- 2 root root     15847 Dec  1 08:33 start_atlas.sh
[2025-12-02 02:12:14] drwxrwx--x 2 root root      4096 Dec  1 08:33 shared
[2025-12-02 02:12:14] -rw-r--r-- 1 root root         0 Dec  1 08:33 boinc_lockfile
[2025-12-02 02:12:14] -rw-r--r-- 1 root root      2787 Dec  1 08:33 pandaJob.out
[2025-12-02 02:12:14] -rw------- 1 root root    992142 Dec  1 08:33 agis_schedconf.cvmfs.json
[2025-12-02 02:12:14] drwxr-xr-x 5  320  320      4096 Dec  1 08:33 pilot3
[2025-12-02 02:12:14] -rw-r--r-- 1 root root       533 Dec  2 02:03 boinc_task_state.xml
[2025-12-02 02:12:14] -rw------- 1 root root 911093600 Dec  2 02:11 HITS.47556161._006425.pool.root.1
[2025-12-02 02:12:14] -rw------- 1 root root      1054 Dec  2 02:11 memory_monitor_summary.json
[2025-12-02 02:12:14] -rw------- 1 root root   1516240 Dec  2 02:11 agis_ddmendpoints.agis.ALL.json
[2025-12-02 02:12:14] -rw------- 1 root root   2401911 Dec  2 02:11 log.47556161._006425.job.log.tgz.1
[2025-12-02 02:12:14] -rw------- 1 root root      8599 Dec  2 02:11 heartbeat.json
[2025-12-02 02:12:14] -rw-r--r-- 1 root root      8192 Dec  2 02:12 boinc_mmap_file
[2025-12-02 02:12:14] -rw-r--r-- 1 root root        29 Dec  2 02:12 wrapper_checkpoint.txt
[2025-12-02 02:12:14] -rw------- 1 root root       822 Dec  2 02:12 pilotlog.txt
[2025-12-02 02:12:14] -rw------- 1 root root        95 Dec  2 02:12 pilot_heartbeat.json
[2025-12-02 02:12:14] -rw------- 1 root root   9013990 Dec  2 02:12 log.47556161._006425.job.log.1
[2025-12-02 02:12:14] -rw------- 1 root root       353 Dec  2 02:12 output.list
[2025-12-02 02:12:14] -rw-r--r-- 1 root root       620 Dec  2 02:12 runtime_log
[2025-12-02 02:12:14] -rw------- 1 root root  11438080 Dec  2 02:12 result.tar.gz
[2025-12-02 02:12:14] -rw-r--r-- 1 root root      9021 Dec  2 02:12 runtime_log.err
[2025-12-02 02:12:14] -rw------- 1 root root       663 Dec  2 02:12 0UeMDmCgXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm26JKDmj86uJo.diag
[2025-12-02 02:12:14] -rw-r--r-- 1 root root     21466 Dec  2 02:12 stderr.txt
[2025-12-02 02:12:14] HITS file was successfully produced:
[2025-12-02 02:12:14] -rw------- 1 root root 911093600 Dec  2 02:11 shared/HITS.pool.root.1
[2025-12-02 02:12:14]  *** Contents of shared directory: ***
[2025-12-02 02:12:14] total 1303016
[2025-12-02 02:12:14] -rw-r--r-- 2 root root 411135613 Dec  1 08:33 ATLAS.root_0
[2025-12-02 02:12:14] -rw-r--r-- 2 root root    590111 Dec  1 08:33 input.tar.gz
[2025-12-02 02:12:14] -rw-r--r-- 2 root root     15847 Dec  1 08:33 start_atlas.sh
[2025-12-02 02:12:14] -rw------- 1 root root 911093600 Dec  2 02:11 HITS.pool.root.1
[2025-12-02 02:12:14] -rw------- 1 root root  11438080 Dec  2 02:12 result.tar.gz
02:12:15 (184674): run_atlas exited; CPU time 135650.846106
02:12:15 (184674): called boinc_finish(0)

</stderr_txt>
]]>

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