Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-28 13:21:03 (25236): vboxwrapper version 26210
2025-11-28 13:21:03 (25236): BOINC client version: 8.0.2
2025-11-28 13:21:03 (25236): VBoxManage version raw: 
2025-11-28 13:21:05 (25236): Detected: VirtualBox VboxManage Interface (Version: Unknown)
2025-11-28 13:21:05 (25236): Successfully copied 'init_data.xml' to the shared directory.
2025-11-28 13:21:06 (25236): Create VM. (boinc_522c3981ce90546d, slot#0)
2025-11-28 13:21:06 (25236): Setting Memory Size for VM. (4800MB)
2025-11-28 13:21:06 (25236): Setting CPU Count for VM. (8)
2025-11-28 13:21:07 (25236): Setting Chipset Options for VM.
2025-11-28 13:21:07 (25236): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-28 13:21:07 (25236): Setting Boot Options for VM.
2025-11-28 13:21:08 (25236): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-28 13:21:08 (25236): Enabling VM Network Access.
2025-11-28 13:21:08 (25236): Disabling USB Support for VM.
2025-11-28 13:21:09 (25236): Disabling COM Port Support for VM.
2025-11-28 13:21:09 (25236): Disabling LPT Port Support for VM.
2025-11-28 13:21:09 (25236): Disabling Audio Support for VM.
2025-11-28 13:21:09 (25236): Disabling Clipboard Support for VM.
2025-11-28 13:21:10 (25236): Disabling Drag and Drop Support for VM.
2025-11-28 13:21:10 (25236): Adding storage controller(s) to VM.
2025-11-28 13:21:10 (25236): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-28 13:21:12 (25236): Adding VirtualBox Guest Additions to VM.
2025-11-28 13:21:13 (25236): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-28 13:21:13 (25236): forwarding host port 57216 to guest port 80
2025-11-28 13:21:13 (25236): Enabling remote desktop for VM.
2025-11-28 13:21:13 (25236): Required extension pack not installed, remote desktop not enabled.
2025-11-28 13:21:13 (25236): Enabling shared directory for VM.
2025-11-28 13:21:14 (25236): Starting VM using VBoxManage interface. (boinc_522c3981ce90546d, slot#0)
2025-11-28 13:21:28 (25236): Successfully started VM. (PID = '26784')
2025-11-28 13:21:28 (25236): Reporting VM Process ID to BOINC.
2025-11-28 13:21:28 (25236): Guest Log: BIOS: VirtualBox 7.0.6
2025-11-28 13:21:28 (25236): Guest Log: CPUID EDX: 0x178bfbff
2025-11-28 13:21:28 (25236): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-28 13:21:28 (25236): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-28 13:21:28 (25236): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-28 13:21:28 (25236): Detected: Web Application Enabled (http://localhost:57216)
2025-11-28 13:21:28 (25236): Preference change detected
2025-11-28 13:21:28 (25236): Setting CPU throttle for VM. (100%)
2025-11-28 13:21:28 (25236): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-28 13:21:30 (25236): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-28 13:21:30 (25236): Guest Log: BIOS: Booting from Hard Disk...
2025-11-28 13:21:33 (25236): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-28 13:21:33 (25236): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-28 13:21:33 (25236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-28 13:21:42 (25236): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-28 13:21:42 (25236): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-28 13:21:51 (25236): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-28 13:21:51 (25236): Guest Log: 00:00:00.000290 main     Log opened 2025-11-28T13:21:50.270397000Z
2025-11-28 13:21:51 (25236): Guest Log: 00:00:00.000553 main     OS Product: Linux
2025-11-28 13:21:51 (25236): Guest Log: 00:00:00.000628 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-28 13:21:51 (25236): Guest Log: 00:00:00.000685 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-28 13:21:51 (25236): Guest Log: 00:00:00.000743 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-28 13:21:51 (25236): Guest Log: 00:00:00.000744 main     Process ID: 1375
2025-11-28 13:21:51 (25236): Guest Log: 00:00:00.000745 main     Package type: LINUX_64BITS_GENERIC
2025-11-28 13:21:51 (25236): Guest Log: 00:00:00.001875 main     5.2.32 r132073 started. Verbose level = 0
2025-11-28 13:21:52 (25236): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-28 13:21:52 (25236): Guest Log: [INFO] Mounting shared directory
2025-11-28 13:21:52 (25236): Guest Log: [INFO] Checking for init_data.xml
2025-11-28 13:22:01 (25236): Guest Log: 00:00:10.021473 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 229 876 000ns (GuestNow=1 764 354 121 508 166 000 ns GuestLast=1 764 336 110 278 290 000 ns fSetTimeLastLoop=true )
2025-11-28 13:22:05 (25236): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-28 13:22:05 (25236): Guest Log: [INFO] Detected branch: prod
2025-11-28 13:22:06 (25236): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-28 13:22:06 (25236): Guest Log: Copying input files
2025-11-28 13:22:11 (25236): Guest Log: Copied input files into RunAtlas.
2025-11-28 13:22:11 (25236): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-28 13:22:11 (25236): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-28 13:22:11 (25236): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-28 13:22:11 (25236): Guest Log: Further information can be found at the LHC@home message board.
2025-11-28 13:22:20 (25236): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-28 13:22:20 (25236): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-28 13:22:20 (25236): Guest Log: 2.6.3.0 1675 0 32204 153415 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-28 13:22:21 (25236): Guest Log: copied the webapp to /var/www
2025-11-28 13:22:22 (25236): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-28 13:22:22 (25236): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-28 13:22:22 (25236): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-28 13:22:22 (25236): Guest Log:  *** Starting ATLAS job. (PandaID=6893856518 taskID=47523449) ***
2025-11-28 15:01:33 (25236): Status Report: Elapsed Time: '6000.000000'
2025-11-28 15:01:33 (25236): Status Report: CPU Time: '37761.000000'
2025-11-28 16:41:38 (25236): Status Report: Elapsed Time: '12000.000000'
2025-11-28 16:41:38 (25236): Status Report: CPU Time: '84189.734375'
2025-11-28 16:56:12 (25236): VM state change detected. (old = 'running', new = 'paused')
2025-11-28 16:56:18 (25236): VM state change detected. (old = 'paused', new = 'running')
2025-11-28 18:21:50 (25236): Status Report: Elapsed Time: '18000.000000'
2025-11-28 18:21:50 (25236): Status Report: CPU Time: '129987.453125'
2025-11-28 20:01:56 (25236): Status Report: Elapsed Time: '24000.000000'
2025-11-28 20:01:56 (25236): Status Report: CPU Time: '176007.828125'
2025-11-28 21:42:01 (25236): Status Report: Elapsed Time: '30000.000000'
2025-11-28 21:42:01 (25236): Status Report: CPU Time: '222015.359375'
2025-11-28 23:22:06 (25236): Status Report: Elapsed Time: '36000.000000'
2025-11-28 23:22:06 (25236): Status Report: CPU Time: '268297.906250'
2025-11-29 01:02:11 (25236): Status Report: Elapsed Time: '42000.000000'
2025-11-29 01:02:11 (25236): Status Report: CPU Time: '314582.000000'
2025-11-29 02:42:16 (25236): Status Report: Elapsed Time: '48000.000000'
2025-11-29 02:42:16 (25236): Status Report: CPU Time: '360815.281250'
2025-11-29 02:57:48 (25236): Guest Log:  *** Job finished ***
2025-11-29 02:57:48 (25236): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:32,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:32,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:39,187 | INFO     | [monitor] cgroup control has ended
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:39,696 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177948464960)>', '<ExcThread(monitor, started 140177045444352)>']
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:40,359 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:40,360 | INFO     | [monitor] control thread has ended
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:44,716 | INFO     | all workflow threads have been joined
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:44,716 | INFO     | end of generic workflow (traces error code: 0)
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:44,716 | INFO     | traces error code: 0
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:44,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:44,991 [wrapper] ==== pilot stdout END ====
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:45,003 [wrapper] ==== wrapper stdout RESUME ====
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:45,017 [wrapper] pilotpid: 6143
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:45,029 [wrapper] Pilot exit status: 0
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:45,093 [wrapper] pandaids: 6893856518
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:45,158 [wrapper] cleanup supervisor_pilot  4430 6144
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:45,179 [wrapper] Test setup, not cleaning
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:45,191 [wrapper] apfmon messages muted
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:45,202 [wrapper] ==== wrapper stdout END ====
2025-11-29 02:57:48 (25236): Guest Log: 2025-11-29 07:57:45,215 [wrapper] ==== wrapper stderr END ====
2025-11-29 02:57:48 (25236): Guest Log:  *** Error codes and diagnostics ***
2025-11-29 02:57:48 (25236): Guest Log:     "exeErrorCode": 0,
2025-11-29 02:57:48 (25236): Guest Log:     "exeErrorDiag": "",
2025-11-29 02:57:48 (25236): Guest Log:     "pilotErrorCode": 0,
2025-11-29 02:57:48 (25236): Guest Log:     "pilotErrorDiag": "",
2025-11-29 02:57:48 (25236): Guest Log:  *** Listing of results directory ***
2025-11-29 02:57:48 (25236): Guest Log: total 926040
2025-11-29 02:57:48 (25236): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 20 12:07 pilot3.tar.gz
2025-11-29 02:57:48 (25236): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 20 12:49 runpilot2-wrapper.sh
2025-11-29 02:57:48 (25236): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 20 12:49 queuedata.json
2025-11-29 02:57:48 (25236): Guest Log: -rwxr-xr-x. 1 atlas atlas     11918 Nov 28 18:22 init_data.xml
2025-11-29 02:57:48 (25236): Guest Log: -rwxr-xr-x. 1 atlas atlas    590096 Nov 28 18:22 input.tar.gz
2025-11-29 02:57:48 (25236): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 28 18:22 start_atlas.sh
2025-11-29 02:57:48 (25236): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 28 18:22 EVNT.47493127._000468.pool.root.1 -> /data/./ATLAS.root_0
2025-11-29 02:57:48 (25236): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 28 18:22 pandaJob.out
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas    991818 Nov 28 18:26 agis_schedconf.cvmfs.json
2025-11-29 02:57:48 (25236): Guest Log: drwx------. 5 atlas atlas      4096 Nov 28 18:26 pilot3
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas 927788266 Nov 29 07:55 HITS.47523449._004672.pool.root.1
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas      1037 Nov 29 07:56 memory_monitor_summary.json
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 29 07:56 agis_ddmendpoints.agis.ALL.json
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas   2030802 Nov 29 07:56 log.47523449._004672.job.log.tgz.1
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas        95 Nov 29 07:56 pilot_heartbeat.json
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas      8663 Nov 29 07:57 heartbeat.json
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas      5063 Nov 29 07:57 pilotlog.txt
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas   6285331 Nov 29 07:57 log.47523449._004672.job.log.1
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas       353 Nov 29 07:57 output.list
2025-11-29 02:57:48 (25236): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 29 07:57 runtime_log
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas   8335360 Nov 29 07:57 result.tar.gz
2025-11-29 02:57:48 (25236): Guest Log: -rw-r--r--. 1 atlas atlas      8756 Nov 29 07:57 runtime_log.err
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas       666 Nov 29 07:57 fYONDmcHJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIqHKDmq1qMqn.diag
2025-11-29 02:57:48 (25236): Guest Log: Looking for outputfile HITS.47523449._004672.pool.root.1
2025-11-29 02:57:48 (25236): Guest Log: HITS file was successfully produced
2025-11-29 02:57:48 (25236): Guest Log: -rw-------. 1 atlas atlas 927788266 Nov 29 07:55 /home/atlas/RunAtlas/HITS.47523449._004672.pool.root.1
2025-11-29 02:57:55 (25236): Guest Log: Successfully finished the ATLAS job!
2025-11-29 02:57:55 (25236): Guest Log: Copying the results back to the shared directory!
2025-11-29 02:57:55 (25236): Guest Log:  *** Contents of shared directory: ***
2025-11-29 02:57:55 (25236): Guest Log: total 1314696
2025-11-29 02:57:55 (25236): Guest Log: -rwxrwxrwx. 1 root root 409500298 Nov 28 18:21 ATLAS.root_0
2025-11-29 02:57:55 (25236): Guest Log: -rwxrwxrwx. 1 root root 927788266 Nov 29 07:57 HITS.pool.root.1
2025-11-29 02:57:55 (25236): Guest Log: -rwxrwxrwx. 1 root root     11918 Nov 28 18:21 init_data.xml
2025-11-29 02:57:55 (25236): Guest Log: -rwxrwxrwx. 1 root root    590096 Nov 28 18:16 input.tar.gz
2025-11-29 02:57:55 (25236): Guest Log: -rwxrwxrwx. 1 root root   8335360 Nov 29 07:57 result.tar.gz
2025-11-29 02:57:55 (25236): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 28 18:16 start_atlas.sh
2025-11-29 02:57:55 (25236): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-29 02:57:55 (25236): VM Completion File Detected.
2025-11-29 02:57:55 (25236): Powering off VM.
2025-11-29 02:57:56 (25236): Successfully stopped VM.
2025-11-29 02:57:56 (25236): Deregistering VM. (boinc_522c3981ce90546d, slot#0)
2025-11-29 02:57:56 (25236): Removing network bandwidth throttle group from VM.
2025-11-29 02:57:56 (25236): Removing VM from VirtualBox.
2025-11-29 02:58:02 (25236): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN