Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:27:38 (22237): wrapper (7.7.26015): starting
13:27:38 (22237): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 13:27:38] Arguments: --nthreads 8
[2025-11-28 13:27:38] Threads: 8
[2025-11-28 13:27:38] Checking for CVMFS
[2025-11-28 13:27:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 13:27:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 13:27:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 13:27:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 13:27:39] 2.11.2.0 2781 74849 84244 153415 0 71 12204633 20275200 1 130560 0 21653539 99.879 4145955 33591 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 13:27:39] CVMFS is ok
[2025-11-28 13:27:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 13:27:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 13:27:39] Further information can be found at the LHC@home message board.
[2025-11-28 13:27:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 13:27:39] Checking for apptainer binary...
[2025-11-28 13:27:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 13:27:39] Running /usr/bin/apptainer --version
[2025-11-28 13:27:39] apptainer version 1.3.2-1.el7
[2025-11-28 13:27:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 13:27:40] c-115-16.aglt2.org
[2025-11-28 13:27:40] apptainer works
[2025-11-28 13:27:40] Set ATHENA_PROC_NUMBER=8
[2025-11-28 13:27:40] Set ATHENA_CORE_NUMBER=8
[2025-11-28 13:27:40] Starting ATLAS job with PandaID=6898378456
[2025-11-28 13:27:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 00:41:22]  *** The last 200 lines of the pilot log: ***
[2025-11-29 00:41:22] 2025-11-29 05:40:49,015 | INFO     | monitor loop #2973: job 0:6898378456 is in state 'finished'
[2025-11-29 00:41:22] 2025-11-29 05:40:49,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,232 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-29 00:41:22] 2025-11-29 05:40:49,236 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2025-11-29 00:41:22] 2025-11-29 05:40:49,237 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898378456/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,238 | INFO     | extracted standard info from prmon json
[2025-11-29 00:41:22] 2025-11-29 05:40:49,238 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 00:41:22] 2025-11-29 05:40:49,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 00:41:22] 2025-11-29 05:40:49,247 | INFO     | fitting pss+swap vs Time
[2025-11-29 00:41:22] 2025-11-29 05:40:49,248 | INFO     | sum of square deviations: 89960335113.56654
[2025-11-29 00:41:22] 2025-11-29 05:40:49,256 | INFO     | sum of deviations: 517789820992.9588
[2025-11-29 00:41:22] 2025-11-29 05:40:49,257 | INFO     | mean x: 1764374670.13142
[2025-11-29 00:41:22] 2025-11-29 05:40:49,257 | INFO     | mean y: 3233930.598187311
[2025-11-29 00:41:22] 2025-11-29 05:40:49,257 | INFO     | intersect: -10152077779.374382
[2025-11-29 00:41:22] 2025-11-29 05:40:49,258 | INFO     | chi2: 7.08935192999532
[2025-11-29 00:41:22] 2025-11-29 05:40:49,258 | INFO     | sum of square deviations: 87937438624.05804
[2025-11-29 00:41:22] 2025-11-29 05:40:49,266 | INFO     | sum of deviations: 777858130519.8418
[2025-11-29 00:41:22] 2025-11-29 05:40:49,267 | INFO     | mean x: 1764374517.6362252
[2025-11-29 00:41:22] 2025-11-29 05:40:49,267 | INFO     | mean y: 3253531.2587519027
[2025-11-29 00:41:22] 2025-11-29 05:40:49,267 | INFO     | intersect: -15603672088.813717
[2025-11-29 00:41:22] 2025-11-29 05:40:49,267 | INFO     | chi2: 3.706927429333418
[2025-11-29 00:41:22] 2025-11-29 05:40:49,268 | INFO     | current chi2=3.706927429333418 (change=47.71133573367594 %)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,268 | INFO     | sum of square deviations: 85945100847.01842
[2025-11-29 00:41:22] 2025-11-29 05:40:49,276 | INFO     | sum of deviations: 904833756690.8894
[2025-11-29 00:41:22] 2025-11-29 05:40:49,276 | INFO     | mean x: 1764374365.1411042
[2025-11-29 00:41:22] 2025-11-29 05:40:49,277 | INFO     | mean y: 3263244.9033742333
[2025-11-29 00:41:22] 2025-11-29 05:40:49,277 | INFO     | intersect: -18572146746.89388
[2025-11-29 00:41:22] 2025-11-29 05:40:49,277 | INFO     | chi2: 2.801290573217084
[2025-11-29 00:41:22] 2025-11-29 05:40:49,277 | INFO     | current chi2=2.801290573217084 (change=24.430930288785994 %)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,278 | INFO     | right removable region: 651
[2025-11-29 00:41:22] 2025-11-29 05:40:49,278 | INFO     | sum of square deviations: 87937183644.05795
[2025-11-29 00:41:22] 2025-11-29 05:40:49,286 | INFO     | sum of deviations: 305442969370.50226
[2025-11-29 00:41:22] 2025-11-29 05:40:49,287 | INFO     | mean x: 1764374822.6362252
[2025-11-29 00:41:22] 2025-11-29 05:40:49,287 | INFO     | mean y: 3249907.5251141554
[2025-11-29 00:41:22] 2025-11-29 05:40:49,287 | INFO     | intersect: -6125168840.679557
[2025-11-29 00:41:22] 2025-11-29 05:40:49,287 | INFO     | chi2: 4.624014458763452
[2025-11-29 00:41:22] 2025-11-29 05:40:49,288 | INFO     | current chi2=4.624014458763452 (change=34.7752163466583 %)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,288 | INFO     | sum of square deviations: 85944710752.85126
[2025-11-29 00:41:22] 2025-11-29 05:40:49,297 | INFO     | sum of deviations: 268747686465.3673
[2025-11-29 00:41:22] 2025-11-29 05:40:49,297 | INFO     | mean x: 1764374975.136503
[2025-11-29 00:41:22] 2025-11-29 05:40:49,297 | INFO     | mean y: 3252713.467791411
[2025-11-29 00:41:22] 2025-11-29 05:40:49,297 | INFO     | intersect: -5513918599.015731
[2025-11-29 00:41:22] 2025-11-29 05:40:49,298 | INFO     | chi2: 4.587995855179154
[2025-11-29 00:41:22] 2025-11-29 05:40:49,298 | INFO     | current chi2=4.587995855179154 (change=0.7789466037683971 %)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,298 | INFO     | left removable region: 20
[2025-11-29 00:41:22] 2025-11-29 05:40:49,298 | INFO     | sum of square deviations: 77905108386.19006
[2025-11-29 00:41:22] 2025-11-29 05:40:49,306 | INFO     | sum of deviations: 629275316341.4847
[2025-11-29 00:41:22] 2025-11-29 05:40:49,306 | INFO     | mean x: 1764374944.6465926
[2025-11-29 00:41:22] 2025-11-29 05:40:49,306 | INFO     | mean y: 3287969.2488114103
[2025-11-29 00:41:22] 2025-11-29 05:40:49,307 | INFO     | intersect: -14248378249.269522
[2025-11-29 00:41:22] 2025-11-29 05:40:49,307 | INFO     | chi2: 0.13520991072626748
[2025-11-29 00:41:22] 2025-11-29 05:40:49,307 | INFO     | current memory leak: 8.08 B/s (using 631 data points, chi2=0.14)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,308 | INFO     | could have reported an average CPU frequency of 2376 MHz (26 samples)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,308 | INFO     | ..............................
[2025-11-29 00:41:22] 2025-11-29 05:40:49,308 | INFO     | . Timing measurements:
[2025-11-29 00:41:22] 2025-11-29 05:40:49,308 | INFO     | . get job = 0 s
[2025-11-29 00:41:22] 2025-11-29 05:40:49,308 | INFO     | . initial setup = 2 s
[2025-11-29 00:41:22] 2025-11-29 05:40:49,308 | INFO     | . payload setup = 8 s
[2025-11-29 00:41:22] 2025-11-29 05:40:49,309 | INFO     | . stage-in = 0 s
[2025-11-29 00:41:22] 2025-11-29 05:40:49,309 | INFO     | . payload execution = 40331 s
[2025-11-29 00:41:22] 2025-11-29 05:40:49,309 | INFO     | . stage-out = 3 s
[2025-11-29 00:41:22] 2025-11-29 05:40:49,309 | INFO     | . log creation = 0 s
[2025-11-29 00:41:22] 2025-11-29 05:40:49,309 | INFO     | ..............................
[2025-11-29 00:41:22] 2025-11-29 05:40:49,390 | INFO     | 
[2025-11-29 00:41:22] 2025-11-29 05:40:49,390 | INFO     | job summary report
[2025-11-29 00:41:22] 2025-11-29 05:40:49,390 | INFO     | --------------------------------------------------
[2025-11-29 00:41:22] 2025-11-29 05:40:49,390 | INFO     | PanDA job id: 6898378456
[2025-11-29 00:41:22] 2025-11-29 05:40:49,391 | INFO     | task id: 47556161
[2025-11-29 00:41:22] 2025-11-29 05:40:49,391 | INFO     | errors: (none)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 00:41:22] 2025-11-29 05:40:49,391 | INFO     | pilot state: finished 
[2025-11-29 00:41:22] 2025-11-29 05:40:49,391 | INFO     | transexitcode: 0
[2025-11-29 00:41:22] 2025-11-29 05:40:49,391 | INFO     | exeerrorcode: 0
[2025-11-29 00:41:22] 2025-11-29 05:40:49,391 | INFO     | exeerrordiag: 
[2025-11-29 00:41:22] 2025-11-29 05:40:49,391 | INFO     | exitcode: 0
[2025-11-29 00:41:22] 2025-11-29 05:40:49,391 | INFO     | exitmsg: OK
[2025-11-29 00:41:22] 2025-11-29 05:40:49,392 | INFO     | cpuconsumptiontime: 312206 s
[2025-11-29 00:41:22] 2025-11-29 05:40:49,392 | INFO     | nevents: 1000
[2025-11-29 00:41:22] 2025-11-29 05:40:49,392 | INFO     | neventsw: 0
[2025-11-29 00:41:22] 2025-11-29 05:40:49,392 | INFO     | pid: 32356
[2025-11-29 00:41:22] 2025-11-29 05:40:49,392 | INFO     | pgrp: 32356
[2025-11-29 00:41:22] 2025-11-29 05:40:49,392 | INFO     | corecount: 8
[2025-11-29 00:41:22] 2025-11-29 05:40:49,392 | INFO     | event service: False
[2025-11-29 00:41:22] 2025-11-29 05:40:49,392 | INFO     | sizes: {0: 2284316, 1: 2284316, 6: 2284606, 11: 2284634, 40343: 2327025, 40344: 2327024, 40348: 2336202, 40349: 2336258, 40354: 2336504}
[2025-11-29 00:41:22] 2025-11-29 05:40:49,392 | INFO     | --------------------------------------------------
[2025-11-29 00:41:22] 2025-11-29 05:40:49,393 | INFO     | 
[2025-11-29 00:41:22] 2025-11-29 05:40:49,393 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-29 00:41:22] 2025-11-29 05:40:49,418 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,421 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,421 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,421 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,422 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,422 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,422 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,422 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,422 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 00:41:22] 2025-11-29 05:40:49,423 | INFO     | job 6898378456 has completed (purged errors)
[2025-11-29 00:41:22] 2025-11-29 05:40:49,423 | INFO     | overall cleanup function is called
[2025-11-29 00:41:22] 2025-11-29 05:40:50,438 | INFO     | --- collectZombieJob: --- 10, [32356]
[2025-11-29 00:41:22] 2025-11-29 05:40:50,439 | INFO     | zombie collector waiting for pid 32356
[2025-11-29 00:41:22] 2025-11-29 05:40:50,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 00:41:22] 2025-11-29 05:40:50,439 | INFO     | collected zombie processes
[2025-11-29 00:41:22] 2025-11-29 05:40:50,439 | INFO     | will attempt to kill all subprocesses of pid=32356
[2025-11-29 00:41:22] 2025-11-29 05:40:50,523 | INFO     | process IDs to be killed: [32356] (in reverse order)
[2025-11-29 00:41:22] 2025-11-29 05:40:50,578 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 00:41:22] 2025-11-29 05:40:50,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 00:41:22] 2025-11-29 05:40:50,583 | INFO     | did not find any defunct processes belonging to 32356
[2025-11-29 00:41:22] 2025-11-29 05:40:50,587 | INFO     | did not find any defunct processes belonging to 32356
[2025-11-29 00:41:22] 2025-11-29 05:40:50,589 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 00:41:22] 2025-11-29 05:40:50,590 | INFO     | ready for new job
[2025-11-29 00:41:22] 2025-11-29 05:40:50,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 00:41:22] 2025-11-29 05:40:50,592 | INFO     | ***************************************
[2025-11-29 00:41:22] 2025-11-29 05:40:50,593 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 00:41:22] 2025-11-29 05:40:50,593 | INFO     | ***************************************
[2025-11-29 00:41:22] 2025-11-29 05:40:50,593 | INFO     | 
[2025-11-29 00:41:22] 2025-11-29 05:40:50,593 | INFO     | architecture information:
[2025-11-29 00:41:22] 2025-11-29 05:40:50,594 | INFO     | executing command: cat /etc/os-release
[2025-11-29 00:41:22] 2025-11-29 05:40:50,610 | INFO     | cat /etc/os-release:
[2025-11-29 00:41:22] NAME="CentOS Linux"
[2025-11-29 00:41:22] VERSION="7 (Core)"
[2025-11-29 00:41:22] ID="centos"
[2025-11-29 00:41:22] ID_LIKE="rhel fedora"
[2025-11-29 00:41:22] VERSION_ID="7"
[2025-11-29 00:41:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 00:41:22] ANSI_COLOR="0;31"
[2025-11-29 00:41:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 00:41:22] HOME_URL="https://www.centos.org/"
[2025-11-29 00:41:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 00:41:22] 
[2025-11-29 00:41:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 00:41:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 00:41:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 00:41:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 00:41:22] 
[2025-11-29 00:41:22] 2025-11-29 05:40:50,611 | INFO     | ***************************************
[2025-11-29 00:41:22] 2025-11-29 05:40:51,113 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-29 00:41:22] 2025-11-29 05:40:51,133 | INFO     | sufficient remaining disk space (17461936128 B)
[2025-11-29 00:41:22] 2025-11-29 05:40:51,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 00:41:22] 2025-11-29 05:40:51,133 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 00:41:22] 2025-11-29 05:40:51,134 | INFO     | update_server=False
[2025-11-29 00:41:22] 2025-11-29 05:40:51,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 00:41:22] 2025-11-29 05:40:51,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 00:41:22] 2025-11-29 05:40:51,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 00:41:22] 2025-11-29 05:40:51,506 | INFO     | all payload control threads have been joined
[2025-11-29 00:41:22] 2025-11-29 05:40:51,517 | INFO     | all data control threads have been joined
[2025-11-29 00:41:22] 2025-11-29 05:40:51,517 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 00:41:22] 2025-11-29 05:40:51,517 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 00:41:22] 2025-11-29 05:40:51,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 00:41:22] 2025-11-29 05:40:51,518 | INFO     | will abort loop
[2025-11-29 00:41:22] 2025-11-29 05:40:52,140 | INFO     | [job] retrieve thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:52,140 | INFO     | [job] queue monitor thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:52,233 | INFO     | [job] validate thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:52,448 | INFO     | [payload] validate_post thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:52,505 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:52,511 | INFO     | [payload] control thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:52,520 | INFO     | [job] job monitor thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:52,523 | INFO     | [data] control thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:52,613 | INFO     | [payload] failed_post thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:52,651 | INFO     | all job control threads have been joined
[2025-11-29 00:41:22] 2025-11-29 05:40:52,937 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:53,035 | INFO     | [data] copytool_in thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:53,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:53,222 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:53,380 | INFO     | [data] copytool_out thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:53,657 | INFO     | [job] control thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:40:54,144 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 00:41:22] 2025-11-29 05:40:58,150 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 00:41:22] 2025-11-29 05:41:03,715 | INFO     | [monitor] cgroup control has ended
[2025-11-29 00:41:22] 2025-11-29 05:41:03,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140044683228992)>', '<ExcThread(monitor, started 140043565913856)>']
[2025-11-29 00:41:22] 2025-11-29 05:41:08,910 | INFO     | all workflow threads have been joined
[2025-11-29 00:41:22] 2025-11-29 05:41:08,911 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 00:41:22] 2025-11-29 05:41:08,917 | INFO     | traces error code: 0
[2025-11-29 00:41:22] 2025-11-29 05:41:08,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 00:41:22] 2025-11-29 05:41:21,834 | INFO     | PID=25928 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 00:41:22] 2025-11-29 05:41:21,834 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 00:41:22] 2025-11-29 05:41:21,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 00:41:22] 2025-11-29 05:41:21,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 00:41:22] 2025-11-29 05:41:21,835 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 00:41:22] 2025-11-29 05:41:21,835 | INFO     | [monitor] control thread has ended
[2025-11-29 00:41:22] 2025-11-29 05:41:21,965 [wrapper] ==== pilot stdout END ====
[2025-11-29 00:41:22] 2025-11-29 05:41:21,970 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 00:41:22] 2025-11-29 05:41:21,974 [wrapper] pilotpid: 25928
[2025-11-29 00:41:22] 2025-11-29 05:41:21,979 [wrapper] Pilot exit status: 0
[2025-11-29 00:41:22] 2025-11-29 05:41:21,995 [wrapper] pandaids: 6898378456
[2025-11-29 00:41:22] 2025-11-29 05:41:22,042 [wrapper] cleanup supervisor_pilot   330 25929
[2025-11-29 00:41:22] 2025-11-29 05:41:22,047 [wrapper] Test setup, not cleaning
[2025-11-29 00:41:22] 2025-11-29 05:41:22,052 [wrapper] apfmon messages muted
[2025-11-29 00:41:22] 2025-11-29 05:41:22,056 [wrapper] ==== wrapper stdout END ====
[2025-11-29 00:41:22] 2025-11-29 05:41:22,061 [wrapper] ==== wrapper stderr END ====
[2025-11-29 00:41:22]  *** Error codes and diagnostics ***
[2025-11-29 00:41:22]     "exeErrorCode": 0,
[2025-11-29 00:41:22]     "exeErrorDiag": "",
[2025-11-29 00:41:22]     "pilotErrorCode": 0,
[2025-11-29 00:41:22]     "pilotErrorDiag": "",
[2025-11-29 00:41:22]  *** Listing of results directory ***
[2025-11-29 00:41:22] total 1322908
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-29 00:41:22] -rwx------ 1 boincer umatlas     36292 Nov 26 11:38 runpilot2-wrapper.sh
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 11:41 queuedata.json
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas       100 Nov 28 13:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 00:41:22] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 13:27 run_atlas
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas       105 Nov 28 13:27 job.xml
[2025-11-29 00:41:22] -rw-r--r-- 2 boincer umatlas 412144346 Nov 28 13:27 EVNT.47483658._002609.pool.root.1
[2025-11-29 00:41:22] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 13:27 start_atlas.sh
[2025-11-29 00:41:22] drwxrwx--x 2 boincer umatlas      4096 Nov 28 13:27 shared
[2025-11-29 00:41:22] -rw-r--r-- 2 boincer umatlas    590110 Nov 28 13:27 input.tar.gz
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas         0 Nov 28 13:27 boinc_lockfile
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas      2787 Nov 28 13:27 pandaJob.out
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas        57 Nov 28 13:27 setup.sh.local
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas    991818 Nov 28 13:27 agis_schedconf.cvmfs.json
[2025-11-29 00:41:22] drwx------ 5 boincer umatlas      4096 Nov 28 13:27 pilot3
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas       533 Nov 29 00:27 boinc_task_state.xml
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas 923611786 Nov 29 00:40 HITS.47556161._005918.pool.root.1
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas      5913 Nov 29 00:40 init_data.xml
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas        95 Nov 29 00:40 pilot_heartbeat.json
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas      1073 Nov 29 00:40 memory_monitor_summary.json
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas   1516240 Nov 29 00:40 agis_ddmendpoints.agis.ALL.json
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas   1922078 Nov 29 00:40 log.47556161._005918.job.log.tgz.1
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas      7975 Nov 29 00:40 heartbeat.json
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas      8192 Nov 29 00:41 boinc_mmap_file
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas        29 Nov 29 00:41 wrapper_checkpoint.txt
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas       745 Nov 29 00:41 pilotlog.txt
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas   5569864 Nov 29 00:41 log.47556161._005918.job.log.1
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas       353 Nov 29 00:41 output.list
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas       620 Nov 29 00:41 runtime_log
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas   7516160 Nov 29 00:41 result.tar.gz
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas      9343 Nov 29 00:41 runtime_log.err
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas       668 Nov 29 00:41 rlXMDmliXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsAKKDmzRq14m.diag
[2025-11-29 00:41:22] -rw-r--r-- 1 boincer umatlas     21309 Nov 29 00:41 stderr.txt
[2025-11-29 00:41:22] HITS file was successfully produced:
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas 923611786 Nov 29 00:40 shared/HITS.pool.root.1
[2025-11-29 00:41:22]  *** Contents of shared directory: ***
[2025-11-29 00:41:22] total 1312396
[2025-11-29 00:41:22] -rw-r--r-- 2 boincer umatlas 412144346 Nov 28 13:27 ATLAS.root_0
[2025-11-29 00:41:22] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 13:27 start_atlas.sh
[2025-11-29 00:41:22] -rw-r--r-- 2 boincer umatlas    590110 Nov 28 13:27 input.tar.gz
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas 923611786 Nov 29 00:40 HITS.pool.root.1
[2025-11-29 00:41:22] -rw------- 1 boincer umatlas   7516160 Nov 29 00:41 result.tar.gz
00:41:24 (22237): run_atlas exited; CPU time 310275.736375
00:41:24 (22237): called boinc_finish(0)

</stderr_txt>
]]>

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