Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
07:52:11 (61354): wrapper (7.7.26015): starting
07:52:11 (61354): wrapper: running run_atlas (--nthreads 10)
[2025-12-01 07:52:11] Arguments: --nthreads 10
[2025-12-01 07:52:11] Threads: 10
[2025-12-01 07:52:11] Checking for CVMFS
[2025-12-01 07:52:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 07:52:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 07:52:12] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 07:52:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 07:52:12] 2.13.3.0 4125 12 42652 153522 3 76 3928160 4096000 2894 130560 0 327806 99.478 222206 746 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-01 07:52:12] CVMFS is ok
[2025-12-01 07:52:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 07:52:12] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-01 07:52:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-01 07:52:12] Further information can be found at the LHC@home message board.
[2025-12-01 07:52:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 07:52:12] Checking for apptainer binary...
[2025-12-01 07:52:12] apptainer is not installed, using version from CVMFS
[2025-12-01 07:52:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 07:52:12] 7950x-linux
[2025-12-01 07:52:12] apptainer works
[2025-12-01 07:52:12] Set ATHENA_PROC_NUMBER=10
[2025-12-01 07:52:12] Set ATHENA_CORE_NUMBER=10
[2025-12-01 07:52:12] Starting ATLAS job with PandaID=6898686890
[2025-12-01 07:52:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc520/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 00:43:10]  *** The last 200 lines of the pilot log: ***
[2025-12-02 00:43:10] 2025-12-02 08:42:12,119 | INFO     | monitor loop #4381: job 0:6898686890 is in state 'finished'
[2025-12-02 00:43:10] 2025-12-02 08:42:12,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 00:43:10] 2025-12-02 08:42:12,824 | INFO     | time since job start (60589s) is within the limit (172800.0s)
[2025-12-02 00:43:10] 2025-12-02 08:42:13,853 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 00:43:10] 2025-12-02 08:42:13,856 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.131562499999
[2025-12-02 00:43:10] 2025-12-02 08:42:13,859 | INFO     | using path: /var/lib/multiboinc/boinc520/slots/1/PanDA_Pilot-6898686890/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 00:43:10] 2025-12-02 08:42:13,860 | INFO     | extracted standard info from prmon json
[2025-12-02 00:43:10] 2025-12-02 08:42:13,860 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 00:43:10] 2025-12-02 08:42:13,860 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 00:43:10] 2025-12-02 08:42:13,868 | INFO     | fitting pss+swap vs Time
[2025-12-02 00:43:10] 2025-12-02 08:42:13,868 | INFO     | sum of square deviations: 303616751312.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,879 | INFO     | sum of deviations: 1919313093636.0012
[2025-12-02 00:43:10] 2025-12-02 08:42:13,879 | INFO     | mean x: 1764634622.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,879 | INFO     | mean y: 3175519.0312185297
[2025-12-02 00:43:10] 2025-12-02 08:42:13,879 | INFO     | intersect: -11151961082.794853
[2025-12-02 00:43:10] 2025-12-02 08:42:13,879 | INFO     | chi2: 4.401425514451872
[2025-12-02 00:43:10] 2025-12-02 08:42:13,880 | INFO     | sum of square deviations: 299053447147.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,891 | INFO     | sum of deviations: 2172295553323.4993
[2025-12-02 00:43:10] 2025-12-02 08:42:13,891 | INFO     | mean x: 1764634469.5
[2025-12-02 00:43:10] 2025-12-02 08:42:13,891 | INFO     | mean y: 3183965.003036437
[2025-12-02 00:43:10] 2025-12-02 08:42:13,891 | INFO     | intersect: -12814951548.586132
[2025-12-02 00:43:10] 2025-12-02 08:42:13,892 | INFO     | chi2: 2.678792169908043
[2025-12-02 00:43:10] 2025-12-02 08:42:13,892 | INFO     | current chi2=2.678792169908043 (change=39.1380778542689 %)
[2025-12-02 00:43:10] 2025-12-02 08:42:13,892 | INFO     | sum of square deviations: 294536097332.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,903 | INFO     | sum of deviations: 2229015751081.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,907 | INFO     | mean x: 1764634317.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,907 | INFO     | mean y: 3185875.7741607325
[2025-12-02 00:43:10] 2025-12-02 08:42:13,907 | INFO     | intersect: -13351366327.235956
[2025-12-02 00:43:10] 2025-12-02 08:42:13,907 | INFO     | chi2: 2.489879205066859
[2025-12-02 00:43:10] 2025-12-02 08:42:13,907 | INFO     | current chi2=2.489879205066859 (change=7.0521695174160905 %)
[2025-12-02 00:43:10] 2025-12-02 08:42:13,907 | INFO     | right removable region: 982
[2025-12-02 00:43:10] 2025-12-02 08:42:13,908 | INFO     | sum of square deviations: 299053447147.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,918 | INFO     | sum of deviations: 1608204838872.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,919 | INFO     | mean x: 1764634774.5
[2025-12-02 00:43:10] 2025-12-02 08:42:13,919 | INFO     | mean y: 3185904.902834008
[2025-12-02 00:43:10] 2025-12-02 08:42:13,919 | INFO     | intersect: -9486402696.28701
[2025-12-02 00:43:10] 2025-12-02 08:42:13,919 | INFO     | chi2: 2.074055396337226
[2025-12-02 00:43:10] 2025-12-02 08:42:13,919 | INFO     | current chi2=2.074055396337226 (change=52.877644083100726 %)
[2025-12-02 00:43:10] 2025-12-02 08:42:13,920 | INFO     | sum of square deviations: 294536097332.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,931 | INFO     | sum of deviations: 1544089379040.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,931 | INFO     | mean x: 1764634927.0
[2025-12-02 00:43:10] 2025-12-02 08:42:13,931 | INFO     | mean y: 3188068.2767039672
[2025-12-02 00:43:10] 2025-12-02 08:42:13,931 | INFO     | intersect: -9247814010.400236
[2025-12-02 00:43:10] 2025-12-02 08:42:13,931 | INFO     | chi2: 2.0358905724568537
[2025-12-02 00:43:10] 2025-12-02 08:42:13,931 | INFO     | current chi2=2.0358905724568537 (change=1.8401062935817138 %)
[2025-12-02 00:43:10] 2025-12-02 08:42:13,931 | INFO     | left removable region: 20
[2025-12-02 00:43:10] 2025-12-02 08:42:13,932 | INFO     | sum of square deviations: 276059801140.5
[2025-12-02 00:43:10] 2025-12-02 08:42:13,942 | INFO     | sum of deviations: 1760080599611.5
[2025-12-02 00:43:10] 2025-12-02 08:42:13,942 | INFO     | mean x: 1764634896.5
[2025-12-02 00:43:10] 2025-12-02 08:42:13,942 | INFO     | mean y: 3202042.974012474
[2025-12-02 00:43:10] 2025-12-02 08:42:13,942 | INFO     | intersect: -11247619822.054995
[2025-12-02 00:43:10] 2025-12-02 08:42:13,943 | INFO     | chi2: 0.0934469029614461
[2025-12-02 00:43:10] 2025-12-02 08:42:13,943 | INFO     | current memory leak: 6.38 B/s (using 962 data points, chi2=0.09)
[2025-12-02 00:43:10] 2025-12-02 08:42:13,943 | INFO     | could have reported an average CPU frequency of 4000 MHz (37 samples)
[2025-12-02 00:43:10] 2025-12-02 08:42:13,943 | INFO     | ..............................
[2025-12-02 00:43:10] 2025-12-02 08:42:13,943 | INFO     | . Timing measurements:
[2025-12-02 00:43:10] 2025-12-02 08:42:13,943 | INFO     | . get job = 0 s
[2025-12-02 00:43:10] 2025-12-02 08:42:13,943 | INFO     | . initial setup = 3 s
[2025-12-02 00:43:10] 2025-12-02 08:42:13,943 | INFO     | . payload setup = 4 s
[2025-12-02 00:43:10] 2025-12-02 08:42:13,944 | INFO     | . stage-in = 0 s
[2025-12-02 00:43:10] 2025-12-02 08:42:13,947 | INFO     | . payload execution = 60559 s
[2025-12-02 00:43:10] 2025-12-02 08:42:13,947 | INFO     | . stage-out = 3 s
[2025-12-02 00:43:10] 2025-12-02 08:42:13,947 | INFO     | . log creation = 0 s
[2025-12-02 00:43:10] 2025-12-02 08:42:13,947 | INFO     | ..............................
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | 
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | job summary report
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | --------------------------------------------------
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | PanDA job id: 6898686890
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | task id: 47556161
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | errors: (none)
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | pilot state: finished 
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | transexitcode: 0
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | exeerrorcode: 0
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | exeerrordiag: 
[2025-12-02 00:43:10] 2025-12-02 08:42:14,003 | INFO     | exitcode: 0
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | exitmsg: OK
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | cpuconsumptiontime: 134919 s
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | nevents: 1000
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | neventsw: 0
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | pid: 72126
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | pgrp: 72126
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | corecount: 10
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | event service: False
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | sizes: {0: 2284330, 3: 2284592, 11: 2284620, 60567: 2337323, 60568: 2337322, 60572: 2346584, 60577: 2346774}
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | --------------------------------------------------
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | 
[2025-12-02 00:43:10] 2025-12-02 08:42:14,004 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc520/slots/1
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 00:43:10] 2025-12-02 08:42:14,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 00:43:10] 2025-12-02 08:42:14,029 | INFO     | job 6898686890 has completed (purged errors)
[2025-12-02 00:43:10] 2025-12-02 08:42:14,029 | INFO     | overall cleanup function is called
[2025-12-02 00:43:10] 2025-12-02 08:42:15,043 | INFO     | --- collectZombieJob: --- 10, [72126]
[2025-12-02 00:43:10] 2025-12-02 08:42:15,043 | INFO     | zombie collector waiting for pid 72126
[2025-12-02 00:43:10] 2025-12-02 08:42:15,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 00:43:10] 2025-12-02 08:42:15,043 | INFO     | collected zombie processes
[2025-12-02 00:43:10] 2025-12-02 08:42:15,043 | INFO     | will attempt to kill all subprocesses of pid=72126
[2025-12-02 00:43:10] 2025-12-02 08:42:15,304 | INFO     | process IDs to be killed: [72126] (in reverse order)
[2025-12-02 00:43:10] 2025-12-02 08:42:15,420 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 00:43:10] 2025-12-02 08:42:15,420 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 00:43:10] 2025-12-02 08:42:15,425 | INFO     | did not find any defunct processes belonging to 72126
[2025-12-02 00:43:10] 2025-12-02 08:42:15,429 | INFO     | did not find any defunct processes belonging to 72126
[2025-12-02 00:43:10] 2025-12-02 08:42:15,430 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 00:43:10] 2025-12-02 08:42:15,430 | INFO     | ready for new job
[2025-12-02 00:43:10] 2025-12-02 08:42:15,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 00:43:10] 2025-12-02 08:42:15,432 | INFO     | ***************************************
[2025-12-02 00:43:10] 2025-12-02 08:42:15,432 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 00:43:10] 2025-12-02 08:42:15,433 | INFO     | ***************************************
[2025-12-02 00:43:10] 2025-12-02 08:42:15,433 | INFO     | 
[2025-12-02 00:43:10] 2025-12-02 08:42:15,434 | INFO     | architecture information:
[2025-12-02 00:43:10] 2025-12-02 08:42:15,438 | INFO     | executing command: cat /etc/os-release
[2025-12-02 00:43:10] 2025-12-02 08:42:15,473 | INFO     | cat /etc/os-release:
[2025-12-02 00:43:10] NAME="CentOS Linux"
[2025-12-02 00:43:10] VERSION="7 (Core)"
[2025-12-02 00:43:10] ID="centos"
[2025-12-02 00:43:10] ID_LIKE="rhel fedora"
[2025-12-02 00:43:10] VERSION_ID="7"
[2025-12-02 00:43:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 00:43:10] ANSI_COLOR="0;31"
[2025-12-02 00:43:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 00:43:10] HOME_URL="https://www.centos.org/"
[2025-12-02 00:43:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 00:43:10] 
[2025-12-02 00:43:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 00:43:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 00:43:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 00:43:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 00:43:10] 
[2025-12-02 00:43:10] 2025-12-02 08:42:15,473 | INFO     | ***************************************
[2025-12-02 00:43:10] 2025-12-02 08:42:15,976 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc520/slots/1
[2025-12-02 00:43:10] 2025-12-02 08:42:15,990 | INFO     | sufficient remaining disk space (169667985408 B)
[2025-12-02 00:43:10] 2025-12-02 08:42:15,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 00:43:10] 2025-12-02 08:42:15,990 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 00:43:10] 2025-12-02 08:42:15,990 | INFO     | update_server=False
[2025-12-02 00:43:10] 2025-12-02 08:42:15,990 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 00:43:10] 2025-12-02 08:42:15,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 00:43:10] 2025-12-02 08:42:15,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 00:43:10] 2025-12-02 08:42:15,991 | INFO     | aborting loop
[2025-12-02 00:43:10] 2025-12-02 08:42:16,172 | INFO     | all payload control threads have been joined
[2025-12-02 00:43:10] 2025-12-02 08:42:16,253 | INFO     | all data control threads have been joined
[2025-12-02 00:43:10] 2025-12-02 08:42:16,313 | INFO     | all job control threads have been joined
[2025-12-02 00:43:10] 2025-12-02 08:42:16,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 00:43:10] 2025-12-02 08:42:16,995 | INFO     | [job] retrieve thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:16,995 | INFO     | [job] queue monitor thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:16,996 | INFO     | [job] job monitor thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:17,012 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:17,061 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:17,167 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:17,177 | INFO     | [payload] control thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:17,258 | INFO     | [data] control thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:17,318 | INFO     | [job] control thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:17,347 | INFO     | [payload] validate_post thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:17,688 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:18,017 | INFO     | [job] validate thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:18,082 | INFO     | [data] copytool_in thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:18,101 | INFO     | [payload] failed_post thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:18,928 | INFO     | [data] copytool_out thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:19,489 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 00:43:10] 2025-12-02 08:42:23,494 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 00:43:10] 2025-12-02 08:42:46,196 | INFO     | PID=65446 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 00:43:10] 2025-12-02 08:42:46,196 | INFO     | .. there are 13 such processes running
[2025-12-02 00:43:10] 2025-12-02 08:42:46,196 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 00:43:10] 2025-12-02 08:42:46,196 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 00:43:10] 2025-12-02 08:42:46,196 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 00:43:10] 2025-12-02 08:43:04,500 | INFO     | [monitor] cgroup control has ended
[2025-12-02 00:43:10] 2025-12-02 08:43:05,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130618466096960)>', '<ExcThread(monitor, started 130617513592576)>']
[2025-12-02 00:43:10] 2025-12-02 08:43:05,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 00:43:10] 2025-12-02 08:43:05,297 | INFO     | [monitor] control thread has ended
[2025-12-02 00:43:10] 2025-12-02 08:43:10,295 | INFO     | all workflow threads have been joined
[2025-12-02 00:43:10] 2025-12-02 08:43:10,295 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 00:43:10] 2025-12-02 08:43:10,295 | INFO     | traces error code: 0
[2025-12-02 00:43:10] 2025-12-02 08:43:10,295 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 00:43:10] 2025-12-02 08:43:10,380 [wrapper] ==== pilot stdout END ====
[2025-12-02 00:43:10] 2025-12-02 08:43:10,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 00:43:10] 2025-12-02 08:43:10,384 [wrapper] pilotpid: 65446
[2025-12-02 00:43:10] 2025-12-02 08:43:10,393 [wrapper] Pilot exit status: 0
[2025-12-02 00:43:10] 2025-12-02 08:43:10,400 [wrapper] pandaids: 6898686890
[2025-12-02 00:43:10] 2025-12-02 08:43:10,452 [wrapper] cleanup supervisor_pilot 1448535 65447
[2025-12-02 00:43:10] 2025-12-02 08:43:10,455 [wrapper] Test setup, not cleaning
[2025-12-02 00:43:10] 2025-12-02 08:43:10,457 [wrapper] apfmon messages muted
[2025-12-02 00:43:10] 2025-12-02 08:43:10,459 [wrapper] ==== wrapper stdout END ====
[2025-12-02 00:43:10] 2025-12-02 08:43:10,460 [wrapper] ==== wrapper stderr END ====
[2025-12-02 00:43:10]  *** Error codes and diagnostics ***
[2025-12-02 00:43:10]     "exeErrorCode": 0,
[2025-12-02 00:43:10]     "exeErrorDiag": "",
[2025-12-02 00:43:10]     "pilotErrorCode": 0,
[2025-12-02 00:43:10]     "pilotErrorDiag": "",
[2025-12-02 00:43:10]  *** Listing of results directory ***
[2025-12-02 00:43:10] total 1314772
[2025-12-02 00:43:10] -rw-r--r-- 1 root root    576529 Nov 26 08:12 pilot3.tar.gz
[2025-12-02 00:43:10] -rwx------ 1 4871 1028     36292 Nov 26 08:39 runpilot2-wrapper.sh
[2025-12-02 00:43:10] -rw-r--r-- 1 root root      5112 Nov 26 08:41 queuedata.json
[2025-12-02 00:43:10] -rw-r--r-- 1 root root       100 Dec  1 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 00:43:10] -rwxr-xr-x 1 root root      7986 Dec  1 07:52 run_atlas
[2025-12-02 00:43:10] -rw-r--r-- 1 root root       105 Dec  1 07:52 job.xml
[2025-12-02 00:43:10] -rw-r--r-- 2 root root 410454151 Dec  1 07:52 EVNT.47483658._002662.pool.root.1
[2025-12-02 00:43:10] -rw-r--r-- 2 root root     15847 Dec  1 07:52 start_atlas.sh
[2025-12-02 00:43:10] drwxrwx--x 2 root root      4096 Dec  1 07:52 shared
[2025-12-02 00:43:10] -rw-r--r-- 2 root root    590106 Dec  1 07:52 input.tar.gz
[2025-12-02 00:43:10] -rw-r--r-- 1 root root         0 Dec  1 07:52 boinc_lockfile
[2025-12-02 00:43:10] -rw-r--r-- 1 root root      2787 Dec  1 07:52 pandaJob.out
[2025-12-02 00:43:10] -rw------- 1 root root    992142 Dec  1 07:52 agis_schedconf.cvmfs.json
[2025-12-02 00:43:10] drwxr-xr-x 5  320  320      4096 Dec  1 07:52 pilot3
[2025-12-02 00:43:10] -rw-r--r-- 1 root root      7076 Dec  1 07:58 init_data.xml
[2025-12-02 00:43:10] -rw-r--r-- 1 root root       533 Dec  2 00:31 boinc_task_state.xml
[2025-12-02 00:43:10] -rw------- 1 root root 910098811 Dec  2 00:41 HITS.47556161._006449.pool.root.1
[2025-12-02 00:43:10] -rw------- 1 root root        95 Dec  2 00:41 pilot_heartbeat.json
[2025-12-02 00:43:10] -rw------- 1 root root      1052 Dec  2 00:42 memory_monitor_summary.json
[2025-12-02 00:43:10] -rw------- 1 root root   1516240 Dec  2 00:42 agis_ddmendpoints.agis.ALL.json
[2025-12-02 00:43:10] -rw------- 1 root root   2358227 Dec  2 00:42 log.47556161._006449.job.log.tgz.1
[2025-12-02 00:43:10] -rw------- 1 root root      8601 Dec  2 00:42 heartbeat.json
[2025-12-02 00:43:10] -rw-r--r-- 1 root root      8192 Dec  2 00:43 boinc_mmap_file
[2025-12-02 00:43:10] -rw-r--r-- 1 root root        29 Dec  2 00:43 wrapper_checkpoint.txt
[2025-12-02 00:43:10] -rw------- 1 root root      4837 Dec  2 00:43 pilotlog.txt
[2025-12-02 00:43:10] -rw------- 1 root root   8567396 Dec  2 00:43 log.47556161._006449.job.log.1
[2025-12-02 00:43:10] -rw------- 1 root root       353 Dec  2 00:43 output.list
[2025-12-02 00:43:10] -rw-r--r-- 1 root root       620 Dec  2 00:43 runtime_log
[2025-12-02 00:43:10] -rw------- 1 root root  10946560 Dec  2 00:43 result.tar.gz
[2025-12-02 00:43:10] -rw-r--r-- 1 root root      9021 Dec  2 00:43 runtime_log.err
[2025-12-02 00:43:10] -rw------- 1 root root       664 Dec  2 00:43 AqVKDmwiXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSJNKDmxfEkTn.diag
[2025-12-02 00:43:10] -rw-r--r-- 1 root root     21369 Dec  2 00:43 stderr.txt
[2025-12-02 00:43:10] HITS file was successfully produced:
[2025-12-02 00:43:10] -rw------- 1 root root 910098811 Dec  2 00:41 shared/HITS.pool.root.1
[2025-12-02 00:43:10]  *** Contents of shared directory: ***
[2025-12-02 00:43:10] total 1300904
[2025-12-02 00:43:10] -rw-r--r-- 2 root root 410454151 Dec  1 07:52 ATLAS.root_0
[2025-12-02 00:43:10] -rw-r--r-- 2 root root     15847 Dec  1 07:52 start_atlas.sh
[2025-12-02 00:43:10] -rw-r--r-- 2 root root    590106 Dec  1 07:52 input.tar.gz
[2025-12-02 00:43:10] -rw------- 1 root root 910098811 Dec  2 00:41 HITS.pool.root.1
[2025-12-02 00:43:10] -rw------- 1 root root  10946560 Dec  2 00:43 result.tar.gz
00:43:12 (61354): run_atlas exited; CPU time 135362.345681
00:43:12 (61354): called boinc_finish(0)

</stderr_txt>
]]>

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