Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
14:55:12 (196175): wrapper (7.7.26015): starting
14:55:12 (196175): wrapper: running run_atlas (--nthreads 10)
[2025-11-29 14:55:12] Arguments: --nthreads 10
[2025-11-29 14:55:12] Threads: 10
[2025-11-29 14:55:12] Checking for CVMFS
[2025-11-29 14:55:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 14:55:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 14:55:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 14:55:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 14:55:12] 2.13.3.0 4524 12652 59424 153458 1 81 2653950 4096001 11880 130560 1 1781475196 99.999 1493949 721 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-29 14:55:12] CVMFS is ok
[2025-11-29 14:55:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 14:55:12] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-29 14:55:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-29 14:55:12] Further information can be found at the LHC@home message board.
[2025-11-29 14:55:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 14:55:12] Checking for apptainer binary...
[2025-11-29 14:55:12] apptainer is not installed, using version from CVMFS
[2025-11-29 14:55:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 14:55:12] 7950x-linux
[2025-11-29 14:55:12] apptainer works
[2025-11-29 14:55:12] Set ATHENA_PROC_NUMBER=10
[2025-11-29 14:55:12] Set ATHENA_CORE_NUMBER=10
[2025-11-29 14:55:12] Starting ATLAS job with PandaID=6899449066
[2025-11-29 14:55:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc520/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 08:02:24]  *** The last 200 lines of the pilot log: ***
[2025-11-30 08:02:24] 2025-11-30 16:01:48,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 08:02:24] 2025-11-30 16:01:48,897 | INFO     | time since job start (61582s) is within the limit (172800.0s)
[2025-11-30 08:02:24] 2025-11-30 16:01:50,902 | INFO     | time since job start (61584s) is within the limit (172800.0s)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,103 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-30 08:02:24] 2025-11-30 16:01:51,106 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.88
[2025-11-30 08:02:24] 2025-11-30 16:01:51,111 | INFO     | using path: /var/lib/multiboinc/boinc520/slots/1/PanDA_Pilot-6899449066/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,111 | INFO     | extracted standard info from prmon json
[2025-11-30 08:02:24] 2025-11-30 16:01:51,111 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 08:02:24] 2025-11-30 16:01:51,111 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 08:02:24] 2025-11-30 16:01:51,121 | INFO     | fitting pss+swap vs Time
[2025-11-30 08:02:24] 2025-11-30 16:01:51,122 | INFO     | sum of square deviations: 318536657135.58386
[2025-11-30 08:02:24] 2025-11-30 16:01:51,136 | INFO     | sum of deviations: 2308959502606.679
[2025-11-30 08:02:24] 2025-11-30 16:01:51,136 | INFO     | mean x: 1764487700.1456888
[2025-11-30 08:02:24] 2025-11-30 16:01:51,136 | INFO     | mean y: 3160402.8116947473
[2025-11-30 08:02:24] 2025-11-30 16:01:51,136 | INFO     | intersect: -12786986511.896006
[2025-11-30 08:02:24] 2025-11-30 16:01:51,137 | INFO     | chi2: 4.882098070460242
[2025-11-30 08:02:24] 2025-11-30 16:01:51,137 | INFO     | sum of square deviations: 313824781065.477
[2025-11-30 08:02:24] 2025-11-30 16:01:51,148 | INFO     | sum of deviations: 2591606972647.618
[2025-11-30 08:02:24] 2025-11-30 16:01:51,149 | INFO     | mean x: 1764487547.6464143
[2025-11-30 08:02:24] 2025-11-30 16:01:51,149 | INFO     | mean y: 3169542.587649402
[2025-11-30 08:02:24] 2025-11-30 16:01:51,149 | INFO     | intersect: -14568204381.755991
[2025-11-30 08:02:24] 2025-11-30 16:01:51,149 | INFO     | chi2: 2.784154279506816
[2025-11-30 08:02:24] 2025-11-30 16:01:51,149 | INFO     | current chi2=2.784154279506816 (change=42.97217631999863 %)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,150 | INFO     | sum of square deviations: 309159542544.66284
[2025-11-30 08:02:24] 2025-11-30 16:01:51,161 | INFO     | sum of deviations: 2620216714068.278
[2025-11-30 08:02:24] 2025-11-30 16:01:51,161 | INFO     | mean x: 1764487395.146146
[2025-11-30 08:02:24] 2025-11-30 16:01:51,161 | INFO     | mean y: 3170473.9159159157
[2025-11-30 08:02:24] 2025-11-30 16:01:51,161 | INFO     | intersect: -14951371528.800423
[2025-11-30 08:02:24] 2025-11-30 16:01:51,162 | INFO     | chi2: 2.6650584162236264
[2025-11-30 08:02:24] 2025-11-30 16:01:51,162 | INFO     | current chi2=2.6650584162236264 (change=4.277631601086638 %)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,162 | INFO     | right removable region: 998
[2025-11-30 08:02:24] 2025-11-30 16:01:51,162 | INFO     | sum of square deviations: 313824691395.4769
[2025-11-30 08:02:24] 2025-11-30 16:01:51,173 | INFO     | sum of deviations: 1997016767162.5532
[2025-11-30 08:02:24] 2025-11-30 16:01:51,173 | INFO     | mean x: 1764487852.6464143
[2025-11-30 08:02:24] 2025-11-30 16:01:51,173 | INFO     | mean y: 3170487.584661355
[2025-11-30 08:02:24] 2025-11-30 16:01:51,173 | INFO     | intersect: -11225110536.195623
[2025-11-30 08:02:24] 2025-11-30 16:01:51,174 | INFO     | chi2: 2.591143858063286
[2025-11-30 08:02:24] 2025-11-30 16:01:51,174 | INFO     | current chi2=2.591143858063286 (change=46.92560819821845 %)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,174 | INFO     | sum of square deviations: 309159424205.3703
[2025-11-30 08:02:24] 2025-11-30 16:01:51,189 | INFO     | sum of deviations: 1915361479234.505
[2025-11-30 08:02:24] 2025-11-30 16:01:51,189 | INFO     | mean x: 1764488005.1471472
[2025-11-30 08:02:24] 2025-11-30 16:01:51,189 | INFO     | mean y: 3173156.64964965
[2025-11-30 08:02:24] 2025-11-30 16:01:51,190 | INFO     | intersect: -10928508335.24347
[2025-11-30 08:02:24] 2025-11-30 16:01:51,190 | INFO     | chi2: 2.5297891605774887
[2025-11-30 08:02:24] 2025-11-30 16:01:51,190 | INFO     | current chi2=2.5297891605774887 (change=2.367861486920914 %)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,190 | INFO     | left removable region: 20
[2025-11-30 08:02:24] 2025-11-30 16:01:51,191 | INFO     | sum of square deviations: 290070079415.0021
[2025-11-30 08:02:24] 2025-11-30 16:01:51,201 | INFO     | sum of deviations: 2071754110772.356
[2025-11-30 08:02:24] 2025-11-30 16:01:51,201 | INFO     | mean x: 1764487974.6482618
[2025-11-30 08:02:24] 2025-11-30 16:01:51,201 | INFO     | mean y: 3188421.1492842534
[2025-11-30 08:02:24] 2025-11-30 16:01:51,201 | INFO     | intersect: -12599232422.318317
[2025-11-30 08:02:24] 2025-11-30 16:01:51,202 | INFO     | chi2: 0.20917779785090293
[2025-11-30 08:02:24] 2025-11-30 16:01:51,202 | INFO     | current memory leak: 7.14 B/s (using 978 data points, chi2=0.21)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,202 | INFO     | could have reported an average CPU frequency of 3999 MHz (38 samples)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | ..............................
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | . Timing measurements:
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | . get job = 0 s
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | . initial setup = 3 s
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | . payload setup = 7 s
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | . stage-in = 0 s
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | . payload execution = 61543 s
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | . stage-out = 3 s
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | . log creation = 0 s
[2025-11-30 08:02:24] 2025-11-30 16:01:51,203 | INFO     | ..............................
[2025-11-30 08:02:24] 2025-11-30 16:01:51,539 | INFO     | 
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | job summary report
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | --------------------------------------------------
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | PanDA job id: 6899449066
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | task id: 47556185
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | errors: (none)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | pilot state: finished 
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | transexitcode: 0
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | exeerrorcode: 0
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | exeerrordiag: 
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | exitcode: 0
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | exitmsg: OK
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | cpuconsumptiontime: 138037 s
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | nevents: 1000
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | neventsw: 0
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | pid: 206748
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | pgrp: 206748
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | corecount: 10
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | event service: False
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | sizes: {0: 2284326, 5: 2284588, 11: 2284644, 61553: 2337711, 61554: 2337710, 61559: 2346788, 61560: 2346972, 61568: 2347218}
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | --------------------------------------------------
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | 
[2025-11-30 08:02:24] 2025-11-30 16:01:51,540 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc520/slots/1
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,562 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,562 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,562 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,562 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 08:02:24] 2025-11-30 16:01:51,562 | INFO     | job 6899449066 has completed (purged errors)
[2025-11-30 08:02:24] 2025-11-30 16:01:51,562 | INFO     | overall cleanup function is called
[2025-11-30 08:02:24] 2025-11-30 16:01:52,576 | INFO     | --- collectZombieJob: --- 10, [206748]
[2025-11-30 08:02:24] 2025-11-30 16:01:52,577 | INFO     | zombie collector waiting for pid 206748
[2025-11-30 08:02:24] 2025-11-30 16:01:52,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 08:02:24] 2025-11-30 16:01:52,577 | INFO     | collected zombie processes
[2025-11-30 08:02:24] 2025-11-30 16:01:52,577 | INFO     | will attempt to kill all subprocesses of pid=206748
[2025-11-30 08:02:24] 2025-11-30 16:01:53,054 | INFO     | process IDs to be killed: [206748] (in reverse order)
[2025-11-30 08:02:24] 2025-11-30 16:01:53,184 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 08:02:24] 2025-11-30 16:01:53,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 08:02:24] 2025-11-30 16:01:53,194 | INFO     | did not find any defunct processes belonging to 206748
[2025-11-30 08:02:24] 2025-11-30 16:01:53,203 | INFO     | did not find any defunct processes belonging to 206748
[2025-11-30 08:02:24] 2025-11-30 16:01:53,204 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 08:02:24] 2025-11-30 16:01:53,204 | INFO     | ready for new job
[2025-11-30 08:02:24] 2025-11-30 16:01:53,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 08:02:24] 2025-11-30 16:01:53,207 | INFO     | ***************************************
[2025-11-30 08:02:24] 2025-11-30 16:01:53,207 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 08:02:24] 2025-11-30 16:01:53,207 | INFO     | ***************************************
[2025-11-30 08:02:24] 2025-11-30 16:01:53,207 | INFO     | 
[2025-11-30 08:02:24] 2025-11-30 16:01:53,208 | INFO     | architecture information:
[2025-11-30 08:02:24] 2025-11-30 16:01:53,209 | INFO     | executing command: cat /etc/os-release
[2025-11-30 08:02:24] 2025-11-30 16:01:53,231 | INFO     | cat /etc/os-release:
[2025-11-30 08:02:24] NAME="CentOS Linux"
[2025-11-30 08:02:24] VERSION="7 (Core)"
[2025-11-30 08:02:24] ID="centos"
[2025-11-30 08:02:24] ID_LIKE="rhel fedora"
[2025-11-30 08:02:24] VERSION_ID="7"
[2025-11-30 08:02:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 08:02:24] ANSI_COLOR="0;31"
[2025-11-30 08:02:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 08:02:24] HOME_URL="https://www.centos.org/"
[2025-11-30 08:02:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 08:02:24] 
[2025-11-30 08:02:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 08:02:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 08:02:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 08:02:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 08:02:24] 
[2025-11-30 08:02:24] 2025-11-30 16:01:53,231 | INFO     | ***************************************
[2025-11-30 08:02:24] 2025-11-30 16:01:53,735 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc520/slots/1
[2025-11-30 08:02:24] 2025-11-30 16:01:53,760 | INFO     | sufficient remaining disk space (196189618176 B)
[2025-11-30 08:02:24] 2025-11-30 16:01:53,760 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 08:02:24] 2025-11-30 16:01:53,760 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 08:02:24] 2025-11-30 16:01:53,760 | INFO     | update_server=False
[2025-11-30 08:02:24] 2025-11-30 16:01:53,760 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 08:02:24] 2025-11-30 16:01:53,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 08:02:24] 2025-11-30 16:01:54,541 | INFO     | all data control threads have been joined
[2025-11-30 08:02:24] 2025-11-30 16:01:54,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 08:02:24] 2025-11-30 16:01:54,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 08:02:24] 2025-11-30 16:01:54,737 | INFO     | aborting loop
[2025-11-30 08:02:24] 2025-11-30 16:01:54,764 | INFO     | [job] retrieve thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:54,824 | INFO     | [data] copytool_in thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:55,050 | INFO     | all payload control threads have been joined
[2025-11-30 08:02:24] 2025-11-30 16:01:55,091 | INFO     | [payload] validate_post thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:55,242 | INFO     | all job control threads have been joined
[2025-11-30 08:02:24] 2025-11-30 16:01:55,405 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:55,425 | INFO     | [payload] failed_post thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:55,546 | INFO     | [data] control thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:55,653 | INFO     | [job] validate thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:55,741 | INFO     | [job] job monitor thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:55,874 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:55,964 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:56,055 | INFO     | [payload] control thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:56,196 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:56,247 | INFO     | [job] control thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:56,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 08:02:24] 2025-11-30 16:01:56,639 | INFO     | [data] copytool_out thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:57,273 | INFO     | [job] queue monitor thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:01:57,769 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 08:02:24] 2025-11-30 16:02:08,609 | INFO     | [monitor] cgroup control has ended
[2025-11-30 08:02:24] 2025-11-30 16:02:10,607 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138731644258112)>', '<ExcThread(monitor, started 138731294009088)>']
[2025-11-30 08:02:24] 2025-11-30 16:02:15,632 | INFO     | all workflow threads have been joined
[2025-11-30 08:02:24] 2025-11-30 16:02:15,633 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 08:02:24] 2025-11-30 16:02:15,633 | INFO     | traces error code: 0
[2025-11-30 08:02:24] 2025-11-30 16:02:15,633 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 08:02:24] 2025-11-30 16:02:24,304 | INFO     | PID=200018 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-30 08:02:24] 2025-11-30 16:02:24,304 | INFO     | .. there are 14 such processes running
[2025-11-30 08:02:24] 2025-11-30 16:02:24,304 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 08:02:24] 2025-11-30 16:02:24,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 08:02:24] 2025-11-30 16:02:24,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 08:02:24] 2025-11-30 16:02:24,304 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 08:02:24] 2025-11-30 16:02:24,304 | INFO     | [monitor] control thread has ended
[2025-11-30 08:02:24] 2025-11-30 16:02:24,396 [wrapper] ==== pilot stdout END ====
[2025-11-30 08:02:24] 2025-11-30 16:02:24,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 08:02:24] 2025-11-30 16:02:24,400 [wrapper] pilotpid: 200018
[2025-11-30 08:02:24] 2025-11-30 16:02:24,401 [wrapper] Pilot exit status: 0
[2025-11-30 08:02:24] 2025-11-30 16:02:24,424 [wrapper] pandaids: 6899449066
[2025-11-30 08:02:24] 2025-11-30 16:02:24,475 [wrapper] cleanup supervisor_pilot 1580705 200019
[2025-11-30 08:02:24] 2025-11-30 16:02:24,477 [wrapper] Test setup, not cleaning
[2025-11-30 08:02:24] 2025-11-30 16:02:24,479 [wrapper] apfmon messages muted
[2025-11-30 08:02:24] 2025-11-30 16:02:24,480 [wrapper] ==== wrapper stdout END ====
[2025-11-30 08:02:24] 2025-11-30 16:02:24,482 [wrapper] ==== wrapper stderr END ====
[2025-11-30 08:02:24]  *** Error codes and diagnostics ***
[2025-11-30 08:02:24]     "exeErrorCode": 0,
[2025-11-30 08:02:24]     "exeErrorDiag": "",
[2025-11-30 08:02:24]     "pilotErrorCode": 0,
[2025-11-30 08:02:24]     "pilotErrorDiag": "",
[2025-11-30 08:02:24]  *** Listing of results directory ***
[2025-11-30 08:02:24] total 1334764
[2025-11-30 08:02:24] -rw-r--r-- 1 root root    576529 Nov 26 18:19 pilot3.tar.gz
[2025-11-30 08:02:24] -rwx------ 1 4871 1028     36292 Nov 26 18:45 runpilot2-wrapper.sh
[2025-11-30 08:02:24] -rw-r--r-- 1 root root      5112 Nov 26 18:45 queuedata.json
[2025-11-30 08:02:24] -rw-r--r-- 1 root root       100 Nov 29 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 08:02:24] -rwxr-xr-x 1 root root      7986 Nov 29 14:55 run_atlas
[2025-11-30 08:02:24] -rw-r--r-- 1 root root       105 Nov 29 14:55 job.xml
[2025-11-30 08:02:24] -rw-r--r-- 2 root root 411317576 Nov 29 14:55 EVNT.47483658._004316.pool.root.1
[2025-11-30 08:02:24] -rw-r--r-- 2 root root     15847 Nov 29 14:55 start_atlas.sh
[2025-11-30 08:02:24] drwxrwx--x 2 root root      4096 Nov 29 14:55 shared
[2025-11-30 08:02:24] -rw-r--r-- 2 root root    590101 Nov 29 14:55 input.tar.gz
[2025-11-30 08:02:24] -rw-r--r-- 1 root root         0 Nov 29 14:55 boinc_lockfile
[2025-11-30 08:02:24] -rw-r--r-- 1 root root      2784 Nov 29 14:55 pandaJob.out
[2025-11-30 08:02:24] -rw------- 1 root root    991826 Nov 29 14:55 agis_schedconf.cvmfs.json
[2025-11-30 08:02:24] drwxr-xr-x 5  320  320      4096 Nov 29 14:55 pilot3
[2025-11-30 08:02:24] -rw-r--r-- 1 root root      7075 Nov 30 04:40 init_data.xml
[2025-11-30 08:02:24] -rw-r--r-- 1 root root       533 Nov 30 07:52 boinc_task_state.xml
[2025-11-30 08:02:24] -rw------- 1 root root 929327084 Nov 30 08:01 HITS.47556185._000797.pool.root.1
[2025-11-30 08:02:24] -rw------- 1 root root        95 Nov 30 08:01 pilot_heartbeat.json
[2025-11-30 08:02:24] -rw------- 1 root root      1050 Nov 30 08:01 memory_monitor_summary.json
[2025-11-30 08:02:24] -rw------- 1 root root   1516240 Nov 30 08:01 agis_ddmendpoints.agis.ALL.json
[2025-11-30 08:02:24] -rw------- 1 root root   2370029 Nov 30 08:01 log.47556185._000797.job.log.tgz.1
[2025-11-30 08:02:24] -rw------- 1 root root      8598 Nov 30 08:01 heartbeat.json
[2025-11-30 08:02:24] -rw-r--r-- 1 root root        29 Nov 30 08:02 wrapper_checkpoint.txt
[2025-11-30 08:02:24] -rw-r--r-- 1 root root      8192 Nov 30 08:02 boinc_mmap_file
[2025-11-30 08:02:24] -rw------- 1 root root       822 Nov 30 08:02 pilotlog.txt
[2025-11-30 08:02:24] -rw------- 1 root root   8747033 Nov 30 08:02 log.47556185._000797.job.log.1
[2025-11-30 08:02:24] -rw------- 1 root root       353 Nov 30 08:02 output.list
[2025-11-30 08:02:24] -rw-r--r-- 1 root root       620 Nov 30 08:02 runtime_log
[2025-11-30 08:02:24] -rw------- 1 root root  11141120 Nov 30 08:02 result.tar.gz
[2025-11-30 08:02:24] -rw------- 1 root root       662 Nov 30 08:02 xc5NDmqBhi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGhNKDm4FLCNm.diag
[2025-11-30 08:02:24] -rw-r--r-- 1 root root      9021 Nov 30 08:02 runtime_log.err
[2025-11-30 08:02:24] -rw-r--r-- 1 root root     21461 Nov 30 08:02 stderr.txt
[2025-11-30 08:02:24] HITS file was successfully produced:
[2025-11-30 08:02:24] -rw------- 1 root root 929327084 Nov 30 08:01 shared/HITS.pool.root.1
[2025-11-30 08:02:24]  *** Contents of shared directory: ***
[2025-11-30 08:02:24] total 1320712
[2025-11-30 08:02:24] -rw-r--r-- 2 root root 411317576 Nov 29 14:55 ATLAS.root_0
[2025-11-30 08:02:24] -rw-r--r-- 2 root root     15847 Nov 29 14:55 start_atlas.sh
[2025-11-30 08:02:24] -rw-r--r-- 2 root root    590101 Nov 29 14:55 input.tar.gz
[2025-11-30 08:02:24] -rw------- 1 root root 929327084 Nov 30 08:01 HITS.pool.root.1
[2025-11-30 08:02:24] -rw------- 1 root root  11141120 Nov 30 08:02 result.tar.gz
08:02:26 (196175): run_atlas exited; CPU time 138075.299745
08:02:26 (196175): called boinc_finish(0)

</stderr_txt>
]]>

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