Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:01:26 (1601668): wrapper (7.7.26015): starting
15:01:26 (1601668): wrapper: running run_atlas (--nthreads 9)
[2025-11-28 15:01:26] Arguments: --nthreads 9
[2025-11-28 15:01:26] Threads: 9
[2025-11-28 15:01:26] Checking for CVMFS
[2025-11-28 15:01:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 15:01:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 15:01:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 15:01:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 15:01:27] 2.13.3.0 11393 33384 346568 153417 0 687 23432874 32935936 14887 16776704 0 102001772 99.406 157808020 40866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-28 15:01:27] CVMFS is ok
[2025-11-28 15:01:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 15:01:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 15:01:27] Further information can be found at the LHC@home message board.
[2025-11-28 15:01:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 15:01:27] Checking for apptainer binary...
[2025-11-28 15:01:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 15:01:27] Running /usr/bin/apptainer --version
[2025-11-28 15:01:27] apptainer version 1.4.4-1.el9
[2025-11-28 15:01:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 15:01:27] c6-5-37-2.aglt2.org
[2025-11-28 15:01:27] apptainer works
[2025-11-28 15:01:27] Set ATHENA_PROC_NUMBER=9
[2025-11-28 15:01:27] Set ATHENA_CORE_NUMBER=9
[2025-11-28 15:01:27] Starting ATLAS job with PandaID=6898487632
[2025-11-28 15:01:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 22:25:06]  *** The last 200 lines of the pilot log: ***
[2025-11-29 22:25:06] 2025-11-30 03:24:32,541 | INFO     | monitor loop #6903: job 0:6898487632 is in state 'finished'
[2025-11-29 22:25:06] 2025-11-30 03:24:32,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 22:25:06] 2025-11-30 03:24:32,715 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-29 22:25:06] 2025-11-30 03:24:32,722 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3248.376535714286
[2025-11-29 22:25:06] 2025-11-30 03:24:32,732 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6898487632/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 22:25:06] 2025-11-30 03:24:32,732 | INFO     | extracted standard info from prmon json
[2025-11-29 22:25:06] 2025-11-30 03:24:32,732 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 22:25:06] 2025-11-30 03:24:32,733 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 22:25:06] 2025-11-30 03:24:32,761 | INFO     | fitting pss+swap vs Time
[2025-11-29 22:25:06] 2025-11-30 03:24:32,764 | INFO     | sum of square deviations: 1969712321376.9404
[2025-11-29 22:25:06] 2025-11-30 03:24:32,815 | INFO     | time since job start (112974s) is within the limit (172800.0s)
[2025-11-29 22:25:06] 2025-11-30 03:24:32,819 | INFO     | sum of deviations: 5864153068097.189
[2025-11-29 22:25:06] 2025-11-30 03:24:32,820 | INFO     | mean x: 1764416588.737041
[2025-11-29 22:25:06] 2025-11-30 03:24:32,820 | INFO     | mean y: 3153948.090712743
[2025-11-29 22:25:06] 2025-11-30 03:24:32,820 | INFO     | intersect: -5249800424.9676285
[2025-11-29 22:25:06] 2025-11-30 03:24:32,822 | INFO     | chi2: 7.239933795007664
[2025-11-29 22:25:06] 2025-11-30 03:24:32,825 | INFO     | sum of square deviations: 1953803842184.4065
[2025-11-29 22:25:06] 2025-11-30 03:24:32,879 | INFO     | sum of deviations: 6589255027276.583
[2025-11-29 22:25:06] 2025-11-30 03:24:32,880 | INFO     | mean x: 1764416436.245804
[2025-11-29 22:25:06] 2025-11-30 03:24:32,880 | INFO     | mean y: 3160898.8489442337
[2025-11-29 22:25:06] 2025-11-30 03:24:32,880 | INFO     | intersect: -5947380103.129891
[2025-11-29 22:25:06] 2025-11-30 03:24:32,882 | INFO     | chi2: 3.757728126243401
[2025-11-29 22:25:06] 2025-11-30 03:24:32,882 | INFO     | current chi2=3.757728126243401 (change=48.09720319770655 %)
[2025-11-29 22:25:06] 2025-11-30 03:24:32,884 | INFO     | sum of square deviations: 1937981159161.5957
[2025-11-29 22:25:06] 2025-11-30 03:24:32,939 | INFO     | sum of deviations: 6850060578594.42
[2025-11-29 22:25:06] 2025-11-30 03:24:32,939 | INFO     | mean x: 1764416283.7540717
[2025-11-29 22:25:06] 2025-11-30 03:24:32,940 | INFO     | mean y: 3163410.144408252
[2025-11-29 22:25:06] 2025-11-30 03:24:32,940 | INFO     | intersect: -6233408278.097701
[2025-11-29 22:25:06] 2025-11-30 03:24:32,942 | INFO     | chi2: 3.0356830476550614
[2025-11-29 22:25:06] 2025-11-30 03:24:32,942 | INFO     | current chi2=3.0356830476550614 (change=19.21493664072413 %)
[2025-11-29 22:25:06] 2025-11-30 03:24:32,942 | INFO     | right removable region: 1841
[2025-11-29 22:25:06] 2025-11-30 03:24:32,944 | INFO     | sum of square deviations: 1953800297967.8965
[2025-11-29 22:25:06] 2025-11-30 03:24:33,000 | INFO     | sum of deviations: 5298701324007.333
[2025-11-29 22:25:06] 2025-11-30 03:24:33,000 | INFO     | mean x: 1764416741.2452626
[2025-11-29 22:25:06] 2025-11-30 03:24:33,000 | INFO     | mean y: 3159363.952896589
[2025-11-29 22:25:06] 2025-11-30 03:24:33,000 | INFO     | intersect: -4781934247.027092
[2025-11-29 22:25:06] 2025-11-30 03:24:33,002 | INFO     | chi2: 4.906442051610521
[2025-11-29 22:25:06] 2025-11-30 03:24:33,002 | INFO     | current chi2=4.906442051610521 (change=32.23084367161223 %)
[2025-11-29 22:25:06] 2025-11-30 03:24:33,004 | INFO     | sum of square deviations: 1937974634080.1235
[2025-11-29 22:25:06] 2025-11-30 03:24:33,059 | INFO     | sum of deviations: 5177991775823.684
[2025-11-29 22:25:06] 2025-11-30 03:24:33,060 | INFO     | mean x: 1764416893.7513573
[2025-11-29 22:25:06] 2025-11-30 03:24:33,060 | INFO     | mean y: 3160526.927252986
[2025-11-29 22:25:06] 2025-11-30 03:24:33,060 | INFO     | intersect: -4711109724.2442465
[2025-11-29 22:25:06] 2025-11-30 03:24:33,062 | INFO     | chi2: 4.866219307645131
[2025-11-29 22:25:06] 2025-11-30 03:24:33,062 | INFO     | current chi2=4.866219307645131 (change=0.8197945383292082 %)
[2025-11-29 22:25:06] 2025-11-30 03:24:33,062 | INFO     | left removable region: 20
[2025-11-29 22:25:06] 2025-11-30 03:24:33,064 | INFO     | sum of square deviations: 1872446180117.3525
[2025-11-29 22:25:06] 2025-11-30 03:24:33,118 | INFO     | sum of deviations: 5931438625588.241
[2025-11-29 22:25:06] 2025-11-30 03:24:33,118 | INFO     | mean x: 1764416863.2828116
[2025-11-29 22:25:06] 2025-11-30 03:24:33,118 | INFO     | mean y: 3172195.3975837454
[2025-11-29 22:25:06] 2025-11-30 03:24:33,118 | INFO     | intersect: -5586056721.109381
[2025-11-29 22:25:06] 2025-11-30 03:24:33,120 | INFO     | chi2: 0.591698805854903
[2025-11-29 22:25:06] 2025-11-30 03:24:33,120 | INFO     | current memory leak: 3.17 B/s (using 1821 data points, chi2=0.59)
[2025-11-29 22:25:06] 2025-11-30 03:24:33,122 | INFO     | could have reported an average CPU frequency of 2870 MHz (65 samples)
[2025-11-29 22:25:06] 2025-11-30 03:24:33,122 | INFO     | ..............................
[2025-11-29 22:25:06] 2025-11-30 03:24:33,122 | INFO     | . Timing measurements:
[2025-11-29 22:25:06] 2025-11-30 03:24:33,122 | INFO     | . get job = 0 s
[2025-11-29 22:25:06] 2025-11-30 03:24:33,122 | INFO     | . initial setup = 2 s
[2025-11-29 22:25:06] 2025-11-30 03:24:33,122 | INFO     | . payload setup = 7 s
[2025-11-29 22:25:06] 2025-11-30 03:24:33,122 | INFO     | . stage-in = 0 s
[2025-11-29 22:25:06] 2025-11-30 03:24:33,123 | INFO     | . payload execution = 112936 s
[2025-11-29 22:25:06] 2025-11-30 03:24:33,123 | INFO     | . stage-out = 3 s
[2025-11-29 22:25:06] 2025-11-30 03:24:33,123 | INFO     | . log creation = 0 s
[2025-11-29 22:25:06] 2025-11-30 03:24:33,123 | INFO     | ..............................
[2025-11-29 22:25:06] 2025-11-30 03:24:33,262 | INFO     | 
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | job summary report
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | --------------------------------------------------
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | PanDA job id: 6898487632
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | task id: 47556161
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | errors: (none)
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | pilot state: finished 
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | transexitcode: 0
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | exeerrorcode: 0
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | exeerrordiag: 
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | exitcode: 0
[2025-11-29 22:25:06] 2025-11-30 03:24:33,263 | INFO     | exitmsg: OK
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | cpuconsumptiontime: 246376 s
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | nevents: 1000
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | neventsw: 0
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | pid: 1612461
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | pgrp: 1612461
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | corecount: 9
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | event service: False
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | sizes: {0: 2284316, 4: 2284578, 11: 2284606, 112948: 2361656, 112953: 2370706, 112958: 2370992}
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | --------------------------------------------------
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | 
[2025-11-29 22:25:06] 2025-11-30 03:24:33,264 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-29 22:25:06] 2025-11-30 03:24:33,282 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,282 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,283 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 22:25:06] 2025-11-30 03:24:33,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,284 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 22:25:06] 2025-11-30 03:24:33,284 | INFO     | job 6898487632 has completed (purged errors)
[2025-11-29 22:25:06] 2025-11-30 03:24:33,284 | INFO     | overall cleanup function is called
[2025-11-29 22:25:06] 2025-11-30 03:24:34,298 | INFO     | --- collectZombieJob: --- 10, [1612461]
[2025-11-29 22:25:06] 2025-11-30 03:24:34,299 | INFO     | zombie collector waiting for pid 1612461
[2025-11-29 22:25:06] 2025-11-30 03:24:34,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 22:25:06] 2025-11-30 03:24:34,299 | INFO     | collected zombie processes
[2025-11-29 22:25:06] 2025-11-30 03:24:34,299 | INFO     | will attempt to kill all subprocesses of pid=1612461
[2025-11-29 22:25:06] 2025-11-30 03:24:34,564 | INFO     | process IDs to be killed: [1612461] (in reverse order)
[2025-11-29 22:25:06] 2025-11-30 03:24:34,656 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 22:25:06] 2025-11-30 03:24:34,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 22:25:06] 2025-11-30 03:24:34,666 | INFO     | did not find any defunct processes belonging to 1612461
[2025-11-29 22:25:06] 2025-11-30 03:24:34,677 | INFO     | did not find any defunct processes belonging to 1612461
[2025-11-29 22:25:06] 2025-11-30 03:24:34,678 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 22:25:06] 2025-11-30 03:24:34,678 | INFO     | ready for new job
[2025-11-29 22:25:06] 2025-11-30 03:24:34,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 22:25:06] 2025-11-30 03:24:34,685 | INFO     | ***************************************
[2025-11-29 22:25:06] 2025-11-30 03:24:34,685 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 22:25:06] 2025-11-30 03:24:34,685 | INFO     | ***************************************
[2025-11-29 22:25:06] 2025-11-30 03:24:34,685 | INFO     | 
[2025-11-29 22:25:06] 2025-11-30 03:24:34,688 | INFO     | architecture information:
[2025-11-29 22:25:06] 2025-11-30 03:24:34,689 | INFO     | executing command: cat /etc/os-release
[2025-11-29 22:25:06] 2025-11-30 03:24:34,704 | INFO     | cat /etc/os-release:
[2025-11-29 22:25:06] NAME="CentOS Linux"
[2025-11-29 22:25:06] VERSION="7 (Core)"
[2025-11-29 22:25:06] ID="centos"
[2025-11-29 22:25:06] ID_LIKE="rhel fedora"
[2025-11-29 22:25:06] VERSION_ID="7"
[2025-11-29 22:25:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 22:25:06] ANSI_COLOR="0;31"
[2025-11-29 22:25:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 22:25:06] HOME_URL="https://www.centos.org/"
[2025-11-29 22:25:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 22:25:06] 
[2025-11-29 22:25:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 22:25:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 22:25:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 22:25:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 22:25:06] 
[2025-11-29 22:25:06] 2025-11-30 03:24:34,704 | INFO     | ***************************************
[2025-11-29 22:25:06] 2025-11-30 03:24:35,207 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-29 22:25:06] 2025-11-30 03:24:35,223 | INFO     | sufficient remaining disk space (70406635520 B)
[2025-11-29 22:25:06] 2025-11-30 03:24:35,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 22:25:06] 2025-11-30 03:24:35,223 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 22:25:06] 2025-11-30 03:24:35,223 | INFO     | update_server=False
[2025-11-29 22:25:06] 2025-11-30 03:24:35,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 22:25:06] 2025-11-30 03:24:35,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 22:25:06] 2025-11-30 03:24:35,517 | INFO     | all data control threads have been joined
[2025-11-29 22:25:06] 2025-11-30 03:24:35,728 | INFO     | all payload control threads have been joined
[2025-11-29 22:25:06] 2025-11-30 03:24:35,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 22:25:06] 2025-11-30 03:24:36,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 22:25:06] 2025-11-30 03:24:36,049 | INFO     | aborting loop
[2025-11-29 22:25:06] 2025-11-30 03:24:36,225 | INFO     | [job] retrieve thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:36,467 | INFO     | [job] validate thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:36,523 | INFO     | [data] control thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:36,536 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:36,574 | INFO     | [payload] failed_post thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:36,731 | INFO     | [payload] control thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:36,734 | INFO     | [payload] validate_post thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:36,780 | INFO     | all job control threads have been joined
[2025-11-29 22:25:06] 2025-11-30 03:24:36,792 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:37,055 | INFO     | [job] job monitor thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:37,339 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:37,509 | INFO     | [data] copytool_in thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:37,652 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:37,781 | INFO     | [job] control thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:37,784 | INFO     | [data] copytool_out thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:38,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 22:25:06] 2025-11-30 03:24:39,223 | INFO     | [job] queue monitor thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:24:39,230 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 22:25:06] 2025-11-30 03:25:00,423 | INFO     | [monitor] cgroup control has ended
[2025-11-29 22:25:06] 2025-11-30 03:25:00,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976965674816)>', '<ExcThread(monitor, started 139976322832128)>']
[2025-11-29 22:25:06] 2025-11-30 03:25:05,649 | INFO     | all workflow threads have been joined
[2025-11-29 22:25:06] 2025-11-30 03:25:05,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 22:25:06] 2025-11-30 03:25:05,650 | INFO     | traces error code: 0
[2025-11-29 22:25:06] 2025-11-30 03:25:05,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 22:25:06] 2025-11-30 03:25:06,266 | INFO     | PID=1605577 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 22:25:06] 2025-11-30 03:25:06,266 | INFO     | .. there are 25 such processes running
[2025-11-29 22:25:06] 2025-11-30 03:25:06,267 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 22:25:06] 2025-11-30 03:25:06,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 22:25:06] 2025-11-30 03:25:06,267 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 22:25:06] 2025-11-30 03:25:06,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 22:25:06] 2025-11-30 03:25:06,267 | INFO     | [monitor] control thread has ended
[2025-11-29 22:25:06] 2025-11-30 03:25:06,412 [wrapper] ==== pilot stdout END ====
[2025-11-29 22:25:06] 2025-11-30 03:25:06,415 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 22:25:06] 2025-11-30 03:25:06,418 [wrapper] pilotpid: 1605577
[2025-11-29 22:25:06] 2025-11-30 03:25:06,421 [wrapper] Pilot exit status: 0
[2025-11-29 22:25:06] 2025-11-30 03:25:06,430 [wrapper] pandaids: 6898487632
[2025-11-29 22:25:06] 2025-11-30 03:25:06,491 [wrapper] cleanup supervisor_pilot 2774367 1605578
[2025-11-29 22:25:06] 2025-11-30 03:25:06,493 [wrapper] Test setup, not cleaning
[2025-11-29 22:25:06] 2025-11-30 03:25:06,496 [wrapper] apfmon messages muted
[2025-11-29 22:25:06] 2025-11-30 03:25:06,498 [wrapper] ==== wrapper stdout END ====
[2025-11-29 22:25:06] 2025-11-30 03:25:06,501 [wrapper] ==== wrapper stderr END ====
[2025-11-29 22:25:06]  *** Error codes and diagnostics ***
[2025-11-29 22:25:06]     "exeErrorCode": 0,
[2025-11-29 22:25:06]     "exeErrorDiag": "",
[2025-11-29 22:25:06]     "pilotErrorCode": 0,
[2025-11-29 22:25:06]     "pilotErrorDiag": "",
[2025-11-29 22:25:06]  *** Listing of results directory ***
[2025-11-29 22:25:06] total 1313024
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 11:12 pilot3.tar.gz
[2025-11-29 22:25:06] -rwx------. 1 boincer umatlas     36292 Nov 26 11:36 runpilot2-wrapper.sh
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 11:37 queuedata.json
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas       100 Nov 28 15:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 22:25:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 28 15:01 run_atlas
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas       105 Nov 28 15:01 job.xml
[2025-11-29 22:25:06] -rw-r--r--. 2 boincer umatlas 409213190 Nov 28 15:01 EVNT.47483658._002636.pool.root.1
[2025-11-29 22:25:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 15:01 start_atlas.sh
[2025-11-29 22:25:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 28 15:01 shared
[2025-11-29 22:25:06] -rw-r--r--. 2 boincer umatlas    590111 Nov 28 15:01 input.tar.gz
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas         0 Nov 28 15:01 boinc_lockfile
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas      2787 Nov 28 15:01 pandaJob.out
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas        57 Nov 28 15:01 setup.sh.local
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas    991794 Nov 28 15:01 agis_schedconf.cvmfs.json
[2025-11-29 22:25:06] drwx------. 5 boincer umatlas      4096 Nov 28 15:01 pilot3
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas       533 Nov 29 22:14 boinc_task_state.xml
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas      6842 Nov 29 22:22 init_data.xml
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas 896973293 Nov 29 22:23 HITS.47556161._006184.pool.root.1
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas      1059 Nov 29 22:24 memory_monitor_summary.json
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas   1516240 Nov 29 22:24 agis_ddmendpoints.agis.ALL.json
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas   2844623 Nov 29 22:24 log.47556161._006184.job.log.tgz.1
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas      8617 Nov 29 22:24 heartbeat.json
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas        29 Nov 29 22:25 wrapper_checkpoint.txt
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 29 22:25 boinc_mmap_file
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas       823 Nov 29 22:25 pilotlog.txt
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas        95 Nov 29 22:25 pilot_heartbeat.json
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas  14369911 Nov 29 22:25 log.47556161._006184.job.log.1
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas       353 Nov 29 22:25 output.list
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas       620 Nov 29 22:25 runtime_log
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas  17233920 Nov 29 22:25 result.tar.gz
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas      9349 Nov 29 22:25 runtime_log.err
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas       664 Nov 29 22:25 hYTMDm0fXi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmN5JKDmbt0fSo.diag
[2025-11-29 22:25:06] -rw-r--r--. 1 boincer umatlas     21316 Nov 29 22:25 stderr.txt
[2025-11-29 22:25:06] HITS file was successfully produced:
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas 896973293 Nov 29 22:23 shared/HITS.pool.root.1
[2025-11-29 22:25:06]  *** Contents of shared directory: ***
[2025-11-29 22:25:06] total 1293012
[2025-11-29 22:25:06] -rw-r--r--. 2 boincer umatlas 409213190 Nov 28 15:01 ATLAS.root_0
[2025-11-29 22:25:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 15:01 start_atlas.sh
[2025-11-29 22:25:06] -rw-r--r--. 2 boincer umatlas    590111 Nov 28 15:01 input.tar.gz
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas 896973293 Nov 29 22:23 HITS.pool.root.1
[2025-11-29 22:25:06] -rw-------. 1 boincer umatlas  17233920 Nov 29 22:25 result.tar.gz
22:25:08 (1601668): run_atlas exited; CPU time 248665.977556
22:25:08 (1601668): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN