Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
04:40:57 (1306884): wrapper (7.7.26015): starting
04:40:57 (1306884): wrapper: running run_atlas (--nthreads 10)
[2025-11-30 04:40:57] Arguments: --nthreads 10
[2025-11-30 04:40:57] Threads: 10
[2025-11-30 04:40:57] Checking for CVMFS
[2025-11-30 04:40:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 04:40:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 04:40:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 04:40:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 04:40:57] 2.13.3.0 4524 13478 75484 153481 1 56 3063096 4096000 12885 130560 1 1903797142 99.999 1640976 720 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-30 04:40:57] CVMFS is ok
[2025-11-30 04:40:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 04:40:57] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-30 04:40:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-30 04:40:57] Further information can be found at the LHC@home message board.
[2025-11-30 04:40:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 04:40:57] Checking for apptainer binary...
[2025-11-30 04:40:57] apptainer is not installed, using version from CVMFS
[2025-11-30 04:40:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 04:40:58] 7950x-linux
[2025-11-30 04:40:58] apptainer works
[2025-11-30 04:40:58] Set ATHENA_PROC_NUMBER=10
[2025-11-30 04:40:58] Set ATHENA_CORE_NUMBER=10
[2025-11-30 04:40:58] Starting ATLAS job with PandaID=6898377767
[2025-11-30 04:40:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc520/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 21:12:12]  *** The last 200 lines of the pilot log: ***
[2025-11-30 21:12:12] 2025-12-01 05:11:38,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,335 | INFO     | time since job start (59429s) is within the limit (172800.0s)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,462 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-30 21:12:12] 2025-12-01 05:11:39,466 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.8755625
[2025-11-30 21:12:12] 2025-12-01 05:11:39,470 | INFO     | using path: /var/lib/multiboinc/boinc520/slots/3/PanDA_Pilot-6898377767/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,470 | INFO     | extracted standard info from prmon json
[2025-11-30 21:12:12] 2025-12-01 05:11:39,470 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 21:12:12] 2025-12-01 05:11:39,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 21:12:12] 2025-12-01 05:11:39,479 | INFO     | fitting pss+swap vs Time
[2025-11-30 21:12:12] 2025-12-01 05:11:39,480 | INFO     | sum of square deviations: 286526219901.3581
[2025-11-30 21:12:12] 2025-12-01 05:11:39,491 | INFO     | sum of deviations: 2201546000514.8013
[2025-11-30 21:12:12] 2025-12-01 05:11:39,491 | INFO     | mean x: 1764536178.1991787
[2025-11-30 21:12:12] 2025-12-01 05:11:39,491 | INFO     | mean y: 3147853.001026694
[2025-11-30 21:12:12] 2025-12-01 05:11:39,491 | INFO     | intersect: -13554800062.604939
[2025-11-30 21:12:12] 2025-12-01 05:11:39,491 | INFO     | chi2: 4.901336223697045
[2025-11-30 21:12:12] 2025-12-01 05:11:39,492 | INFO     | sum of square deviations: 282136512736.4024
[2025-11-30 21:12:12] 2025-12-01 05:11:39,508 | INFO     | sum of deviations: 2485283407325.94
[2025-11-30 21:12:12] 2025-12-01 05:11:39,508 | INFO     | mean x: 1764536025.7027864
[2025-11-30 21:12:12] 2025-12-01 05:11:39,508 | INFO     | mean y: 3157702.3921568627
[2025-11-30 21:12:12] 2025-12-01 05:11:39,508 | INFO     | intersect: -15540282824.942945
[2025-11-30 21:12:12] 2025-12-01 05:11:39,508 | INFO     | chi2: 2.6720173139885364
[2025-11-30 21:12:12] 2025-12-01 05:11:39,509 | INFO     | current chi2=2.6720173139885364 (change=45.483900878502645 %)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,509 | INFO     | sum of square deviations: 277791876183.92017
[2025-11-30 21:12:12] 2025-12-01 05:11:39,519 | INFO     | sum of deviations: 2489893923773.549
[2025-11-30 21:12:12] 2025-12-01 05:11:39,522 | INFO     | mean x: 1764535873.2064316
[2025-11-30 21:12:12] 2025-12-01 05:11:39,522 | INFO     | mean y: 3157860.4595435685
[2025-11-30 21:12:12] 2025-12-01 05:11:39,523 | INFO     | intersect: -15812665155.431313
[2025-11-30 21:12:12] 2025-12-01 05:11:39,523 | INFO     | chi2: 2.6033592507313044
[2025-11-30 21:12:12] 2025-12-01 05:11:39,523 | INFO     | current chi2=2.6033592507313044 (change=2.569521645604373 %)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,523 | INFO     | right removable region: 963
[2025-11-30 21:12:12] 2025-12-01 05:11:39,524 | INFO     | sum of square deviations: 282136097326.4025
[2025-11-30 21:12:12] 2025-12-01 05:11:39,534 | INFO     | sum of deviations: 1899255120325.8208
[2025-11-30 21:12:12] 2025-12-01 05:11:39,534 | INFO     | mean x: 1764536330.7027864
[2025-11-30 21:12:12] 2025-12-01 05:11:39,534 | INFO     | mean y: 3158342.2528379774
[2025-11-30 21:12:12] 2025-12-01 05:11:39,534 | INFO     | intersect: -11875168085.475008
[2025-11-30 21:12:12] 2025-12-01 05:11:39,534 | INFO     | chi2: 2.5891056725812613
[2025-11-30 21:12:12] 2025-12-01 05:11:39,534 | INFO     | current chi2=2.5891056725812613 (change=47.175513892243934 %)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,535 | INFO     | sum of square deviations: 277791045363.9203
[2025-11-30 21:12:12] 2025-12-01 05:11:39,545 | INFO     | sum of deviations: 1817225486158.878
[2025-11-30 21:12:12] 2025-12-01 05:11:39,545 | INFO     | mean x: 1764536483.2064316
[2025-11-30 21:12:12] 2025-12-01 05:11:39,545 | INFO     | mean y: 3161220.503112033
[2025-11-30 21:12:12] 2025-12-01 05:11:39,545 | INFO     | intersect: -11539905851.148272
[2025-11-30 21:12:12] 2025-12-01 05:11:39,545 | INFO     | chi2: 2.519796558513939
[2025-11-30 21:12:12] 2025-12-01 05:11:39,546 | INFO     | current chi2=2.519796558513939 (change=2.676951922098382 %)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,546 | INFO     | left removable region: 20
[2025-11-30 21:12:12] 2025-12-01 05:11:39,546 | INFO     | sum of square deviations: 260029663641.20663
[2025-11-30 21:12:12] 2025-12-01 05:11:39,556 | INFO     | sum of deviations: 1977724218631.1648
[2025-11-30 21:12:12] 2025-12-01 05:11:39,556 | INFO     | mean x: 1764536452.7221632
[2025-11-30 21:12:12] 2025-12-01 05:11:39,556 | INFO     | mean y: 3175824.015906681
[2025-11-30 21:12:12] 2025-12-01 05:11:39,556 | INFO     | intersect: -13417471760.335802
[2025-11-30 21:12:12] 2025-12-01 05:11:39,556 | INFO     | chi2: 0.16012176011596682
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | current memory leak: 7.61 B/s (using 943 data points, chi2=0.16)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | could have reported an average CPU frequency of 3999 MHz (36 samples)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | ..............................
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | . Timing measurements:
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | . get job = 0 s
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | . initial setup = 3 s
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | . payload setup = 7 s
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | . stage-in = 0 s
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | . payload execution = 59389 s
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | . stage-out = 3 s
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | . log creation = 0 s
[2025-11-30 21:12:12] 2025-12-01 05:11:39,557 | INFO     | ..............................
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | 
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | job summary report
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | --------------------------------------------------
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | PanDA job id: 6898377767
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | task id: 47556161
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | errors: (none)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | pilot state: finished 
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | transexitcode: 0
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | exeerrorcode: 0
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | exeerrordiag: 
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | exitcode: 0
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | exitmsg: OK
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | cpuconsumptiontime: 134911 s
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | nevents: 1000
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | neventsw: 0
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | pid: 1319313
[2025-11-30 21:12:12] 2025-12-01 05:11:39,606 | INFO     | pgrp: 1319313
[2025-11-30 21:12:12] 2025-12-01 05:11:39,607 | INFO     | corecount: 10
[2025-11-30 21:12:12] 2025-12-01 05:11:39,607 | INFO     | event service: False
[2025-11-30 21:12:12] 2025-12-01 05:11:39,607 | INFO     | sizes: {0: 2284329, 5: 2284591, 11: 2284647, 59400: 2336911, 59404: 2345989, 59412: 2346179}
[2025-11-30 21:12:12] 2025-12-01 05:11:39,607 | INFO     | --------------------------------------------------
[2025-11-30 21:12:12] 2025-12-01 05:11:39,607 | INFO     | 
[2025-11-30 21:12:12] 2025-12-01 05:11:39,607 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc520/slots/3
[2025-11-30 21:12:12] 2025-12-01 05:11:39,636 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 21:12:12] 2025-12-01 05:11:39,637 | INFO     | job 6898377767 has completed (purged errors)
[2025-11-30 21:12:12] 2025-12-01 05:11:39,638 | INFO     | overall cleanup function is called
[2025-11-30 21:12:12] 2025-12-01 05:11:40,657 | INFO     | --- collectZombieJob: --- 10, [1319313]
[2025-11-30 21:12:12] 2025-12-01 05:11:40,658 | INFO     | zombie collector waiting for pid 1319313
[2025-11-30 21:12:12] 2025-12-01 05:11:40,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 21:12:12] 2025-12-01 05:11:40,658 | INFO     | collected zombie processes
[2025-11-30 21:12:12] 2025-12-01 05:11:40,658 | INFO     | will attempt to kill all subprocesses of pid=1319313
[2025-11-30 21:12:12] 2025-12-01 05:11:40,929 | INFO     | process IDs to be killed: [1319313] (in reverse order)
[2025-11-30 21:12:12] 2025-12-01 05:11:41,066 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 21:12:12] 2025-12-01 05:11:41,067 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 21:12:12] 2025-12-01 05:11:41,072 | INFO     | did not find any defunct processes belonging to 1319313
[2025-11-30 21:12:12] 2025-12-01 05:11:41,076 | INFO     | did not find any defunct processes belonging to 1319313
[2025-11-30 21:12:12] 2025-12-01 05:11:41,077 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 21:12:12] 2025-12-01 05:11:41,077 | INFO     | ready for new job
[2025-11-30 21:12:12] 2025-12-01 05:11:41,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 21:12:12] 2025-12-01 05:11:41,080 | INFO     | ***************************************
[2025-11-30 21:12:12] 2025-12-01 05:11:41,080 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 21:12:12] 2025-12-01 05:11:41,080 | INFO     | ***************************************
[2025-11-30 21:12:12] 2025-12-01 05:11:41,080 | INFO     | 
[2025-11-30 21:12:12] 2025-12-01 05:11:41,081 | INFO     | architecture information:
[2025-11-30 21:12:12] 2025-12-01 05:11:41,081 | INFO     | executing command: cat /etc/os-release
[2025-11-30 21:12:12] 2025-12-01 05:11:41,098 | INFO     | cat /etc/os-release:
[2025-11-30 21:12:12] NAME="CentOS Linux"
[2025-11-30 21:12:12] VERSION="7 (Core)"
[2025-11-30 21:12:12] ID="centos"
[2025-11-30 21:12:12] ID_LIKE="rhel fedora"
[2025-11-30 21:12:12] VERSION_ID="7"
[2025-11-30 21:12:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 21:12:12] ANSI_COLOR="0;31"
[2025-11-30 21:12:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 21:12:12] HOME_URL="https://www.centos.org/"
[2025-11-30 21:12:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 21:12:12] 
[2025-11-30 21:12:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 21:12:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 21:12:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 21:12:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 21:12:12] 
[2025-11-30 21:12:12] 2025-12-01 05:11:41,099 | INFO     | ***************************************
[2025-11-30 21:12:12] 2025-12-01 05:11:41,600 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc520/slots/3
[2025-11-30 21:12:12] 2025-12-01 05:11:41,615 | INFO     | sufficient remaining disk space (182875848704 B)
[2025-11-30 21:12:12] 2025-12-01 05:11:41,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 21:12:12] 2025-12-01 05:11:41,616 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 21:12:12] 2025-12-01 05:11:41,616 | INFO     | update_server=False
[2025-11-30 21:12:12] 2025-12-01 05:11:41,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 21:12:12] 2025-12-01 05:11:41,797 | INFO     | all payload control threads have been joined
[2025-11-30 21:12:12] 2025-12-01 05:11:41,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 21:12:12] 2025-12-01 05:11:42,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 21:12:12] 2025-12-01 05:11:42,121 | INFO     | all data control threads have been joined
[2025-11-30 21:12:12] 2025-12-01 05:11:42,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 21:12:12] 2025-12-01 05:11:42,362 | INFO     | aborting loop
[2025-11-30 21:12:12] 2025-12-01 05:11:42,620 | INFO     | [job] retrieve thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:42,802 | INFO     | [payload] control thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:42,832 | INFO     | [data] copytool_in thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:43,126 | INFO     | [data] control thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:43,227 | INFO     | [payload] failed_post thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:43,237 | INFO     | all job control threads have been joined
[2025-11-30 21:12:12] 2025-12-01 05:11:43,354 | INFO     | [payload] validate_post thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:43,366 | INFO     | [job] job monitor thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:43,637 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:43,638 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:43,843 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:43,903 | INFO     | [job] validate thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:43,936 | INFO     | [data] copytool_out thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:44,242 | INFO     | [job] control thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:44,615 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 21:12:12] 2025-12-01 05:11:45,620 | INFO     | [job] queue monitor thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:46,010 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:49,115 | INFO     | [monitor] cgroup control has ended
[2025-11-30 21:12:12] 2025-12-01 05:11:52,609 | INFO     | job.realtimelogging is not enabled
[2025-11-30 21:12:12] 2025-12-01 05:11:53,614 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 21:12:12] 2025-12-01 05:11:54,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137670452959040)>', '<ExcThread(monitor, started 137670093149952)>']
[2025-11-30 21:12:12] 2025-12-01 05:11:59,733 | INFO     | all workflow threads have been joined
[2025-11-30 21:12:12] 2025-12-01 05:11:59,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 21:12:12] 2025-12-01 05:11:59,734 | INFO     | traces error code: 0
[2025-11-30 21:12:12] 2025-12-01 05:11:59,734 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 21:12:12] 2025-12-01 05:12:12,697 | INFO     | PID=1312613 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 21:12:12] 2025-12-01 05:12:12,697 | INFO     | .. there are 13 such processes running
[2025-11-30 21:12:12] 2025-12-01 05:12:12,697 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 21:12:12] 2025-12-01 05:12:12,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 21:12:12] 2025-12-01 05:12:12,698 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 21:12:12] 2025-12-01 05:12:12,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 21:12:12] 2025-12-01 05:12:12,698 | INFO     | [monitor] control thread has ended
[2025-11-30 21:12:12] 2025-12-01 05:12:12,778 [wrapper] ==== pilot stdout END ====
[2025-11-30 21:12:12] 2025-12-01 05:12:12,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 21:12:12] 2025-12-01 05:12:12,780 [wrapper] pilotpid: 1312613
[2025-11-30 21:12:12] 2025-12-01 05:12:12,782 [wrapper] Pilot exit status: 0
[2025-11-30 21:12:12] 2025-12-01 05:12:12,790 [wrapper] pandaids: 6898377767
[2025-11-30 21:12:12] 2025-12-01 05:12:12,854 [wrapper] cleanup supervisor_pilot 2629455 1312614
[2025-11-30 21:12:12] 2025-12-01 05:12:12,856 [wrapper] Test setup, not cleaning
[2025-11-30 21:12:12] 2025-12-01 05:12:12,858 [wrapper] apfmon messages muted
[2025-11-30 21:12:12] 2025-12-01 05:12:12,860 [wrapper] ==== wrapper stdout END ====
[2025-11-30 21:12:12] 2025-12-01 05:12:12,862 [wrapper] ==== wrapper stderr END ====
[2025-11-30 21:12:12]  *** Error codes and diagnostics ***
[2025-11-30 21:12:12]     "exeErrorCode": 0,
[2025-11-30 21:12:12]     "exeErrorDiag": "",
[2025-11-30 21:12:12]     "pilotErrorCode": 0,
[2025-11-30 21:12:12]     "pilotErrorDiag": "",
[2025-11-30 21:12:12]  *** Listing of results directory ***
[2025-11-30 21:12:12] total 1317496
[2025-11-30 21:12:12] -rw-r--r-- 1 root root    576529 Nov 26 08:12 pilot3.tar.gz
[2025-11-30 21:12:12] -rw-r--r-- 1 root root      5112 Nov 26 08:35 queuedata.json
[2025-11-30 21:12:12] -rwx------ 1 4871 1028     36292 Nov 26 08:35 runpilot2-wrapper.sh
[2025-11-30 21:12:12] -rw-r--r-- 1 root root       100 Nov 30 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 21:12:12] -rwxr-xr-x 1 root root      7986 Nov 30 04:40 run_atlas
[2025-11-30 21:12:12] -rw-r--r-- 1 root root       105 Nov 30 04:40 job.xml
[2025-11-30 21:12:12] -rw-r--r-- 1 root root      7066 Nov 30 04:40 init_data.xml
[2025-11-30 21:12:12] -rw-r--r-- 2 root root 409689291 Nov 30 04:40 EVNT.47483658._002580.pool.root.1
[2025-11-30 21:12:12] -rw-r--r-- 2 root root     15847 Nov 30 04:40 start_atlas.sh
[2025-11-30 21:12:12] drwxrwx--x 2 root root      4096 Nov 30 04:40 shared
[2025-11-30 21:12:12] -rw-r--r-- 2 root root    590105 Nov 30 04:40 input.tar.gz
[2025-11-30 21:12:12] -rw-r--r-- 1 root root         0 Nov 30 04:40 boinc_lockfile
[2025-11-30 21:12:12] -rw-r--r-- 1 root root      2786 Nov 30 04:40 pandaJob.out
[2025-11-30 21:12:12] -rw------- 1 root root    991788 Nov 30 04:41 agis_schedconf.cvmfs.json
[2025-11-30 21:12:12] drwxr-xr-x 5  320  320      4096 Nov 30 04:41 pilot3
[2025-11-30 21:12:12] -rw-r--r-- 1 root root       533 Nov 30 21:04 boinc_task_state.xml
[2025-11-30 21:12:12] -rw------- 1 root root 913923524 Nov 30 21:11 HITS.47556161._005625.pool.root.1
[2025-11-30 21:12:12] -rw------- 1 root root      1055 Nov 30 21:11 memory_monitor_summary.json
[2025-11-30 21:12:12] -rw------- 1 root root   1516240 Nov 30 21:11 agis_ddmendpoints.agis.ALL.json
[2025-11-30 21:12:12] -rw------- 1 root root   2343945 Nov 30 21:11 log.47556161._005625.job.log.tgz.1
[2025-11-30 21:12:12] -rw------- 1 root root        95 Nov 30 21:11 pilot_heartbeat.json
[2025-11-30 21:12:12] -rw------- 1 root root      8599 Nov 30 21:11 heartbeat.json
[2025-11-30 21:12:12] -rw-r--r-- 1 root root      8192 Nov 30 21:12 boinc_mmap_file
[2025-11-30 21:12:12] -rw-r--r-- 1 root root        29 Nov 30 21:12 wrapper_checkpoint.txt
[2025-11-30 21:12:12] -rw------- 1 root root       823 Nov 30 21:12 pilotlog.txt
[2025-11-30 21:12:12] -rw------- 1 root root   8452369 Nov 30 21:12 log.47556161._005625.job.log.1
[2025-11-30 21:12:12] -rw------- 1 root root       353 Nov 30 21:12 output.list
[2025-11-30 21:12:12] -rw-r--r-- 1 root root       620 Nov 30 21:12 runtime_log
[2025-11-30 21:12:12] -rw------- 1 root root  10813440 Nov 30 21:12 result.tar.gz
[2025-11-30 21:12:12] -rw-r--r-- 1 root root      9021 Nov 30 21:12 runtime_log.err
[2025-11-30 21:12:12] -rw------- 1 root root       663 Nov 30 21:12 KNMMDmwfXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwBNKDmWnvqHm.diag
[2025-11-30 21:12:12] -rw-r--r-- 1 root root     21428 Nov 30 21:12 stderr.txt
[2025-11-30 21:12:12] HITS file was successfully produced:
[2025-11-30 21:12:12] -rw------- 1 root root 913923524 Nov 30 21:11 shared/HITS.pool.root.1
[2025-11-30 21:12:12]  *** Contents of shared directory: ***
[2025-11-30 21:12:12] total 1303756
[2025-11-30 21:12:12] -rw-r--r-- 2 root root 409689291 Nov 30 04:40 ATLAS.root_0
[2025-11-30 21:12:12] -rw-r--r-- 2 root root     15847 Nov 30 04:40 start_atlas.sh
[2025-11-30 21:12:12] -rw-r--r-- 2 root root    590105 Nov 30 04:40 input.tar.gz
[2025-11-30 21:12:12] -rw------- 1 root root 913923524 Nov 30 21:11 HITS.pool.root.1
[2025-11-30 21:12:12] -rw------- 1 root root  10813440 Nov 30 21:12 result.tar.gz
21:12:14 (1306884): run_atlas exited; CPU time 134965.646442
21:12:14 (1306884): called boinc_finish(0)

</stderr_txt>
]]>

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