Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:47:30 (13357): wrapper (7.7.26015): starting
10:47:30 (13357): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 10:47:30] Arguments: --nthreads 8
[2025-11-28 10:47:30] Threads: 8
[2025-11-28 10:47:30] Checking for CVMFS
[2025-11-28 10:47:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 10:47:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 10:47:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 10:47:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 10:47:30] 2.11.2.0 2880 156476 88404 153408 2 82 15066152 20275201 1 130560 0 60941146 99.975 5546125 22329 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 10:47:30] CVMFS is ok
[2025-11-28 10:47:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 10:47:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 10:47:30] Further information can be found at the LHC@home message board.
[2025-11-28 10:47:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 10:47:30] Checking for apptainer binary...
[2025-11-28 10:47:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 10:47:30] Running /usr/bin/apptainer --version
[2025-11-28 10:47:30] apptainer version 1.3.2-1.el7
[2025-11-28 10:47:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 10:47:32] c-115-10.aglt2.org
[2025-11-28 10:47:32] apptainer works
[2025-11-28 10:47:32] Set ATHENA_PROC_NUMBER=8
[2025-11-28 10:47:32] Set ATHENA_CORE_NUMBER=8
[2025-11-28 10:47:32] Starting ATLAS job with PandaID=6894246165
[2025-11-28 10:47:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 22:05:02]  *** The last 200 lines of the pilot log: ***
[2025-11-28 22:05:02] 2025-11-29 03:04:19,509 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 22:05:02] 2025-11-29 03:04:19,520 | INFO     | fitting pss+swap vs Time
[2025-11-28 22:05:02] 2025-11-29 03:04:19,521 | INFO     | sum of square deviations: 91189295187.36249
[2025-11-28 22:05:02] 2025-11-29 03:04:19,533 | INFO     | sum of deviations: 530527395162.1125
[2025-11-28 22:05:02] 2025-11-29 03:04:19,533 | INFO     | mean x: 1764365153.649624
[2025-11-28 22:05:02] 2025-11-29 03:04:19,533 | INFO     | mean y: 3186111.4511278197
[2025-11-28 22:05:02] 2025-11-29 03:04:19,534 | INFO     | intersect: -10261659637.792665
[2025-11-28 22:05:02] 2025-11-29 03:04:19,534 | INFO     | chi2: 6.895647397759409
[2025-11-28 22:05:02] 2025-11-29 03:04:19,535 | INFO     | sum of square deviations: 89147956110.23648
[2025-11-28 22:05:02] 2025-11-29 03:04:19,543 | INFO     | sum of deviations: 763465075339.9369
[2025-11-28 22:05:02] 2025-11-29 03:04:19,543 | INFO     | mean x: 1764365001.1545455
[2025-11-28 22:05:02] 2025-11-29 03:04:19,544 | INFO     | mean y: 3203506.3045454547
[2025-11-28 22:05:02] 2025-11-29 03:04:19,544 | INFO     | intersect: -15106857535.004387
[2025-11-28 22:05:02] 2025-11-29 03:04:19,544 | INFO     | chi2: 4.0076073330539534
[2025-11-28 22:05:02] 2025-11-29 03:04:19,545 | INFO     | current chi2=4.0076073330539534 (change=41.882072822398975 %)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,545 | INFO     | sum of square deviations: 87137315283.07869
[2025-11-28 22:05:02] 2025-11-29 03:04:19,554 | INFO     | sum of deviations: 904678997200.1003
[2025-11-28 22:05:02] 2025-11-29 03:04:19,554 | INFO     | mean x: 1764364848.659542
[2025-11-28 22:05:02] 2025-11-29 03:04:19,554 | INFO     | mean y: 3214216.7358778627
[2025-11-28 22:05:02] 2025-11-29 03:04:19,554 | INFO     | intersect: -18314814251.26291
[2025-11-28 22:05:02] 2025-11-29 03:04:19,555 | INFO     | chi2: 2.899789215708296
[2025-11-28 22:05:02] 2025-11-29 03:04:19,555 | INFO     | current chi2=2.899789215708296 (change=27.642880783468797 %)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,556 | INFO     | sum of square deviations: 85157100432.71364
[2025-11-28 22:05:02] 2025-11-29 03:04:19,564 | INFO     | sum of deviations: 961262247064.3711
[2025-11-28 22:05:02] 2025-11-29 03:04:19,564 | INFO     | mean x: 1764364696.1630769
[2025-11-28 22:05:02] 2025-11-29 03:04:19,564 | INFO     | mean y: 3218556.5153846154
[2025-11-28 22:05:02] 2025-11-29 03:04:19,564 | INFO     | intersect: -19913114478.037186
[2025-11-28 22:05:02] 2025-11-29 03:04:19,565 | INFO     | chi2: 2.519394020449393
[2025-11-28 22:05:02] 2025-11-29 03:04:19,565 | INFO     | current chi2=2.519394020449393 (change=13.11802917254413 %)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,565 | INFO     | right removable region: 649
[2025-11-28 22:05:02] 2025-11-29 03:04:19,566 | INFO     | sum of square deviations: 89147692590.23651
[2025-11-28 22:05:02] 2025-11-29 03:04:19,574 | INFO     | sum of deviations: 325395144958.08105
[2025-11-28 22:05:02] 2025-11-29 03:04:19,574 | INFO     | mean x: 1764365306.1545455
[2025-11-28 22:05:02] 2025-11-29 03:04:19,575 | INFO     | mean y: 3201404.9893939393
[2025-11-28 22:05:02] 2025-11-29 03:04:19,575 | INFO     | intersect: -6436852037.493589
[2025-11-28 22:05:02] 2025-11-29 03:04:19,575 | INFO     | chi2: 4.522736313150374
[2025-11-28 22:05:02] 2025-11-29 03:04:19,576 | INFO     | current chi2=4.522736313150374 (change=34.41172304401847 %)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,576 | INFO     | sum of square deviations: 87136828747.39557
[2025-11-28 22:05:02] 2025-11-29 03:04:19,585 | INFO     | sum of deviations: 287587983245.46844
[2025-11-28 22:05:02] 2025-11-29 03:04:19,585 | INFO     | mean x: 1764365458.6580153
[2025-11-28 22:05:02] 2025-11-29 03:04:19,585 | INFO     | mean y: 3204269.7297709924
[2025-11-28 22:05:02] 2025-11-29 03:04:19,585 | INFO     | intersect: -5819939758.547602
[2025-11-28 22:05:02] 2025-11-29 03:04:19,586 | INFO     | chi2: 4.483514382182749
[2025-11-28 22:05:02] 2025-11-29 03:04:19,586 | INFO     | current chi2=4.483514382182749 (change=0.8672168406896265 %)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,586 | INFO     | left removable region: 20
[2025-11-28 22:05:02] 2025-11-29 03:04:19,586 | INFO     | sum of square deviations: 77166906265.83789
[2025-11-28 22:05:02] 2025-11-29 03:04:19,594 | INFO     | sum of deviations: 671916889069.3793
[2025-11-28 22:05:02] 2025-11-29 03:04:19,594 | INFO     | mean x: 1764365275.6756756
[2025-11-28 22:05:02] 2025-11-29 03:04:19,594 | INFO     | mean y: 3240951.5802861685
[2025-11-28 22:05:02] 2025-11-29 03:04:19,595 | INFO     | intersect: -15359650792.841848
[2025-11-28 22:05:02] 2025-11-29 03:04:19,595 | INFO     | chi2: 0.07112822390817043
[2025-11-28 22:05:02] 2025-11-29 03:04:19,595 | INFO     | current memory leak: 8.71 B/s (using 629 data points, chi2=0.07)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,596 | INFO     | could have reported an average CPU frequency of 2376 MHz (26 samples)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,596 | INFO     | ..............................
[2025-11-28 22:05:02] 2025-11-29 03:04:19,596 | INFO     | . Timing measurements:
[2025-11-28 22:05:02] 2025-11-29 03:04:19,596 | INFO     | . get job = 0 s
[2025-11-28 22:05:02] 2025-11-29 03:04:19,596 | INFO     | . initial setup = 2 s
[2025-11-28 22:05:02] 2025-11-29 03:04:19,597 | INFO     | . payload setup = 8 s
[2025-11-28 22:05:02] 2025-11-29 03:04:19,597 | INFO     | . stage-in = 0 s
[2025-11-28 22:05:02] 2025-11-29 03:04:19,597 | INFO     | . payload execution = 40547 s
[2025-11-28 22:05:02] 2025-11-29 03:04:19,597 | INFO     | . stage-out = 3 s
[2025-11-28 22:05:02] 2025-11-29 03:04:19,597 | INFO     | . log creation = 0 s
[2025-11-28 22:05:02] 2025-11-29 03:04:19,597 | INFO     | ..............................
[2025-11-28 22:05:02] 2025-11-29 03:04:19,681 | INFO     | 
[2025-11-28 22:05:02] 2025-11-29 03:04:19,681 | INFO     | job summary report
[2025-11-28 22:05:02] 2025-11-29 03:04:19,681 | INFO     | --------------------------------------------------
[2025-11-28 22:05:02] 2025-11-29 03:04:19,681 | INFO     | PanDA job id: 6894246165
[2025-11-28 22:05:02] 2025-11-29 03:04:19,682 | INFO     | task id: 47533962
[2025-11-28 22:05:02] 2025-11-29 03:04:19,682 | INFO     | errors: (none)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,682 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 22:05:02] 2025-11-29 03:04:19,682 | INFO     | pilot state: finished 
[2025-11-28 22:05:02] 2025-11-29 03:04:19,682 | INFO     | transexitcode: 0
[2025-11-28 22:05:02] 2025-11-29 03:04:19,682 | INFO     | exeerrorcode: 0
[2025-11-28 22:05:02] 2025-11-29 03:04:19,682 | INFO     | exeerrordiag: 
[2025-11-28 22:05:02] 2025-11-29 03:04:19,682 | INFO     | exitcode: 0
[2025-11-28 22:05:02] 2025-11-29 03:04:19,683 | INFO     | exitmsg: OK
[2025-11-28 22:05:02] 2025-11-29 03:04:19,683 | INFO     | cpuconsumptiontime: 314127 s
[2025-11-28 22:05:02] 2025-11-29 03:04:19,683 | INFO     | nevents: 1000
[2025-11-28 22:05:02] 2025-11-29 03:04:19,683 | INFO     | neventsw: 0
[2025-11-28 22:05:02] 2025-11-29 03:04:19,683 | INFO     | pid: 23539
[2025-11-28 22:05:02] 2025-11-29 03:04:19,683 | INFO     | pgrp: 23539
[2025-11-28 22:05:02] 2025-11-29 03:04:19,683 | INFO     | corecount: 8
[2025-11-28 22:05:02] 2025-11-29 03:04:19,683 | INFO     | event service: False
[2025-11-28 22:05:02] 2025-11-29 03:04:19,684 | INFO     | sizes: {0: 2284315, 6: 2284577, 11: 2284605, 40560: 2328394, 40565: 2337388, 40566: 2337444, 40573: 2337818}
[2025-11-28 22:05:02] 2025-11-29 03:04:19,684 | INFO     | --------------------------------------------------
[2025-11-28 22:05:02] 2025-11-29 03:04:19,684 | INFO     | 
[2025-11-28 22:05:02] 2025-11-29 03:04:19,684 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 22:05:02] 2025-11-29 03:04:19,715 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,716 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,716 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,717 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,717 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,717 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,717 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,717 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,718 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,718 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,718 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,719 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 22:05:02] 2025-11-29 03:04:19,719 | INFO     | job 6894246165 has completed (purged errors)
[2025-11-28 22:05:02] 2025-11-29 03:04:19,719 | INFO     | overall cleanup function is called
[2025-11-28 22:05:02] 2025-11-29 03:04:20,734 | INFO     | --- collectZombieJob: --- 10, [23539]
[2025-11-28 22:05:02] 2025-11-29 03:04:20,734 | INFO     | zombie collector waiting for pid 23539
[2025-11-28 22:05:02] 2025-11-29 03:04:20,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 22:05:02] 2025-11-29 03:04:20,734 | INFO     | collected zombie processes
[2025-11-28 22:05:02] 2025-11-29 03:04:20,735 | INFO     | will attempt to kill all subprocesses of pid=23539
[2025-11-28 22:05:02] 2025-11-29 03:04:20,831 | INFO     | process IDs to be killed: [23539] (in reverse order)
[2025-11-28 22:05:02] 2025-11-29 03:04:20,890 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 22:05:02] 2025-11-29 03:04:20,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 22:05:02] 2025-11-29 03:04:20,896 | INFO     | did not find any defunct processes belonging to 23539
[2025-11-28 22:05:02] 2025-11-29 03:04:20,899 | INFO     | did not find any defunct processes belonging to 23539
[2025-11-28 22:05:02] 2025-11-29 03:04:20,902 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 22:05:02] 2025-11-29 03:04:20,902 | INFO     | ready for new job
[2025-11-28 22:05:02] 2025-11-29 03:04:20,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 22:05:02] 2025-11-29 03:04:20,906 | INFO     | ***************************************
[2025-11-28 22:05:02] 2025-11-29 03:04:20,906 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 22:05:02] 2025-11-29 03:04:20,906 | INFO     | ***************************************
[2025-11-28 22:05:02] 2025-11-29 03:04:20,906 | INFO     | 
[2025-11-28 22:05:02] 2025-11-29 03:04:20,907 | INFO     | architecture information:
[2025-11-28 22:05:02] 2025-11-29 03:04:20,908 | INFO     | executing command: cat /etc/os-release
[2025-11-28 22:05:02] 2025-11-29 03:04:20,928 | INFO     | cat /etc/os-release:
[2025-11-28 22:05:02] NAME="CentOS Linux"
[2025-11-28 22:05:02] VERSION="7 (Core)"
[2025-11-28 22:05:02] ID="centos"
[2025-11-28 22:05:02] ID_LIKE="rhel fedora"
[2025-11-28 22:05:02] VERSION_ID="7"
[2025-11-28 22:05:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 22:05:02] ANSI_COLOR="0;31"
[2025-11-28 22:05:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 22:05:02] HOME_URL="https://www.centos.org/"
[2025-11-28 22:05:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 22:05:02] 
[2025-11-28 22:05:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 22:05:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 22:05:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 22:05:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 22:05:02] 
[2025-11-28 22:05:02] 2025-11-29 03:04:20,928 | INFO     | ***************************************
[2025-11-28 22:05:02] 2025-11-29 03:04:21,431 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 22:05:02] 2025-11-29 03:04:21,456 | INFO     | sufficient remaining disk space (17464033280 B)
[2025-11-28 22:05:02] 2025-11-29 03:04:21,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 22:05:02] 2025-11-29 03:04:21,456 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 22:05:02] 2025-11-29 03:04:21,456 | INFO     | update_server=False
[2025-11-28 22:05:02] 2025-11-29 03:04:21,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 22:05:02] 2025-11-29 03:04:21,457 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 22:05:02] 2025-11-29 03:04:21,767 | INFO     | all data control threads have been joined
[2025-11-28 22:05:02] 2025-11-29 03:04:21,801 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 22:05:02] 2025-11-29 03:04:21,802 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 22:05:02] 2025-11-29 03:04:21,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 22:05:02] 2025-11-29 03:04:21,802 | INFO     | will abort loop
[2025-11-28 22:05:02] 2025-11-29 03:04:22,017 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 22:05:02] 2025-11-29 03:04:22,349 | INFO     | all job control threads have been joined
[2025-11-28 22:05:02] 2025-11-29 03:04:22,462 | INFO     | [job] retrieve thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:22,463 | INFO     | [job] queue monitor thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:22,630 | INFO     | [job] validate thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:22,772 | INFO     | [data] control thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:22,808 | INFO     | [job] job monitor thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:22,943 | INFO     | all payload control threads have been joined
[2025-11-28 22:05:02] 2025-11-29 03:04:23,128 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:23,133 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:23,351 | INFO     | [job] control thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:23,462 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 22:05:02] 2025-11-29 03:04:23,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:23,553 | INFO     | [payload] validate_post thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:23,666 | INFO     | [payload] failed_post thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:23,886 | INFO     | [data] copytool_in thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:23,948 | INFO     | [payload] control thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:23,959 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:24,018 | INFO     | [data] copytool_out thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:27,468 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 22:05:02] 2025-11-29 03:04:51,247 | INFO     | PID=17041 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 22:05:02] 2025-11-29 03:04:51,248 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 22:05:02] 2025-11-29 03:04:51,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 22:05:02] 2025-11-29 03:04:51,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 22:05:02] 2025-11-29 03:04:56,128 | INFO     | [monitor] cgroup control has ended
[2025-11-28 22:05:02] 2025-11-29 03:04:56,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139842560419648)>', '<ExcThread(monitor, started 139841853454080)>']
[2025-11-28 22:05:02] 2025-11-29 03:04:57,276 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 22:05:02] 2025-11-29 03:04:57,276 | INFO     | [monitor] control thread has ended
[2025-11-28 22:05:02] 2025-11-29 03:05:01,876 | INFO     | all workflow threads have been joined
[2025-11-28 22:05:02] 2025-11-29 03:05:01,876 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 22:05:02] 2025-11-29 03:05:01,877 | INFO     | traces error code: 0
[2025-11-28 22:05:02] 2025-11-29 03:05:01,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 22:05:02] 2025-11-29 03:05:02,011 [wrapper] ==== pilot stdout END ====
[2025-11-28 22:05:02] 2025-11-29 03:05:02,014 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 22:05:02] 2025-11-29 03:05:02,017 [wrapper] pilotpid: 17041
[2025-11-28 22:05:02] 2025-11-29 03:05:02,022 [wrapper] Pilot exit status: 0
[2025-11-28 22:05:02] 2025-11-29 03:05:02,034 [wrapper] pandaids: 6894246165
[2025-11-28 22:05:02] 2025-11-29 03:05:02,071 [wrapper] cleanup supervisor_pilot 27330 17042
[2025-11-28 22:05:02] 2025-11-29 03:05:02,076 [wrapper] Test setup, not cleaning
[2025-11-28 22:05:02] 2025-11-29 03:05:02,080 [wrapper] apfmon messages muted
[2025-11-28 22:05:02] 2025-11-29 03:05:02,084 [wrapper] ==== wrapper stdout END ====
[2025-11-28 22:05:02] 2025-11-29 03:05:02,087 [wrapper] ==== wrapper stderr END ====
[2025-11-28 22:05:02]  *** Error codes and diagnostics ***
[2025-11-28 22:05:02]     "exeErrorCode": 0,
[2025-11-28 22:05:02]     "exeErrorDiag": "",
[2025-11-28 22:05:02]     "pilotErrorCode": 0,
[2025-11-28 22:05:02]     "pilotErrorDiag": "",
[2025-11-28 22:05:02]  *** Listing of results directory ***
[2025-11-28 22:05:02] total 1320360
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-28 22:05:02] -rwx------ 1 boincer umatlas     36292 Nov 26 20:28 runpilot2-wrapper.sh
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 20:31 queuedata.json
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas       100 Nov 28 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 22:05:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 10:47 run_atlas
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas       105 Nov 28 10:47 job.xml
[2025-11-28 22:05:02] -rw-r--r-- 2 boincer umatlas 410523718 Nov 28 10:47 EVNT.47493127._001024.pool.root.1
[2025-11-28 22:05:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 10:47 start_atlas.sh
[2025-11-28 22:05:02] drwxrwx--x 2 boincer umatlas      4096 Nov 28 10:47 shared
[2025-11-28 22:05:02] -rw-r--r-- 2 boincer umatlas    590108 Nov 28 10:47 input.tar.gz
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas         0 Nov 28 10:47 boinc_lockfile
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas      2787 Nov 28 10:47 pandaJob.out
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas        57 Nov 28 10:47 setup.sh.local
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas    991856 Nov 28 10:47 agis_schedconf.cvmfs.json
[2025-11-28 22:05:02] drwx------ 5 boincer umatlas      4096 Nov 28 10:47 pilot3
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas       532 Nov 28 21:49 boinc_task_state.xml
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas      5913 Nov 28 22:02 init_data.xml
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas 922589310 Nov 28 22:03 HITS.47533962._000240.pool.root.1
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas      1063 Nov 28 22:04 memory_monitor_summary.json
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas   1516240 Nov 28 22:04 agis_ddmendpoints.agis.ALL.json
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas   1924197 Nov 28 22:04 log.47533962._000240.job.log.tgz.1
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas      8658 Nov 28 22:04 heartbeat.json
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas        95 Nov 28 22:04 pilot_heartbeat.json
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas      4932 Nov 28 22:05 pilotlog.txt
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 22:05 boinc_mmap_file
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas        29 Nov 28 22:05 wrapper_checkpoint.txt
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas   5582118 Nov 28 22:05 log.47533962._000240.job.log.1
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas       353 Nov 28 22:05 output.list
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas       620 Nov 28 22:05 runtime_log
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas   7526400 Nov 28 22:05 result.tar.gz
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas       667 Nov 28 22:05 ytxNDmlzfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqdNKDmHChgQn.diag
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas      9343 Nov 28 22:05 runtime_log.err
[2025-11-28 22:05:02] -rw-r--r-- 1 boincer umatlas     21107 Nov 28 22:05 stderr.txt
[2025-11-28 22:05:02] HITS file was successfully produced:
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas 922589310 Nov 28 22:03 shared/HITS.pool.root.1
[2025-11-28 22:05:02]  *** Contents of shared directory: ***
[2025-11-28 22:05:02] total 1309828
[2025-11-28 22:05:02] -rw-r--r-- 2 boincer umatlas 410523718 Nov 28 10:47 ATLAS.root_0
[2025-11-28 22:05:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 10:47 start_atlas.sh
[2025-11-28 22:05:02] -rw-r--r-- 2 boincer umatlas    590108 Nov 28 10:47 input.tar.gz
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas 922589310 Nov 28 22:03 HITS.pool.root.1
[2025-11-28 22:05:02] -rw------- 1 boincer umatlas   7526400 Nov 28 22:05 result.tar.gz
22:05:03 (13357): run_atlas exited; CPU time 312348.453554
22:05:03 (13357): called boinc_finish(0)

</stderr_txt>
]]>

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