Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:37:41 (1601653): wrapper (7.7.26015): starting
01:37:41 (1601653): wrapper: running run_atlas (--nthreads 4)
[2025-12-02 01:37:41] Arguments: --nthreads 4
[2025-12-02 01:37:41] Threads: 4
[2025-12-02 01:37:41] Checking for CVMFS
[2025-12-02 01:37:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 01:37:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 01:37:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 01:37:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 01:37:41] 2.9.2.0 57880 10660 108528 153538 1 81 36775576 36864000 0 130560 1 4254787 99.981 395061 632 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-02 01:37:41] CVMFS is ok
[2025-12-02 01:37:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 01:37:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 01:37:41] Further information can be found at the LHC@home message board.
[2025-12-02 01:37:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 01:37:41] Checking for apptainer binary...
[2025-12-02 01:37:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 01:37:41] Running /usr/bin/apptainer --version
[2025-12-02 01:37:41] apptainer version 1.4.1-1.1
[2025-12-02 01:37:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 01:37:41] magicA254
[2025-12-02 01:37:41] apptainer works
[2025-12-02 01:37:41] Set ATHENA_PROC_NUMBER=4
[2025-12-02 01:37:41] Set ATHENA_CORE_NUMBER=4
[2025-12-02 01:37:41] Starting ATLAS job with PandaID=6894246573
[2025-12-02 01:37:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 08:40:26]  *** The last 200 lines of the pilot log: ***
[2025-12-02 08:40:26] 2025-12-02 07:39:28,146 | INFO     | time since job start (25299s) is within the limit (172800.0s)
[2025-12-02 08:40:26] 2025-12-02 07:39:28,556 | INFO     | monitor loop #1923: job 0:6894246573 is in state 'finished'
[2025-12-02 08:40:26] 2025-12-02 07:39:28,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,150 | INFO     | time since job start (25301s) is within the limit (172800.0s)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,504 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 08:40:26] 2025-12-02 07:39:30,506 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3491.93
[2025-12-02 08:40:26] 2025-12-02 07:39:30,508 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6894246573/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,508 | INFO     | extracted standard info from prmon json
[2025-12-02 08:40:26] 2025-12-02 07:39:30,508 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 08:40:26] 2025-12-02 07:39:30,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 08:40:26] 2025-12-02 07:39:30,511 | INFO     | fitting pss+swap vs Time
[2025-12-02 08:40:26] 2025-12-02 07:39:30,511 | INFO     | sum of square deviations: 22162573680.0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,513 | INFO     | sum of deviations: 198901686057.99997
[2025-12-02 08:40:26] 2025-12-02 07:39:30,513 | INFO     | mean x: 1764648519.0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,513 | INFO     | mean y: 2371618.9903614456
[2025-12-02 08:40:26] 2025-12-02 07:39:30,513 | INFO     | intersect: -15834758616.727486
[2025-12-02 08:40:26] 2025-12-02 07:39:30,513 | INFO     | chi2: 4.7300257888879464
[2025-12-02 08:40:26] 2025-12-02 07:39:30,513 | INFO     | sum of square deviations: 21371126282.5
[2025-12-02 08:40:26] 2025-12-02 07:39:30,515 | INFO     | sum of deviations: 267870577431.49997
[2025-12-02 08:40:26] 2025-12-02 07:39:30,515 | INFO     | mean x: 1764648366.5
[2025-12-02 08:40:26] 2025-12-02 07:39:30,515 | INFO     | mean y: 2384839.831707317
[2025-12-02 08:40:26] 2025-12-02 07:39:30,515 | INFO     | intersect: -22116120785.441868
[2025-12-02 08:40:26] 2025-12-02 07:39:30,515 | INFO     | chi2: 2.9062651628833374
[2025-12-02 08:40:26] 2025-12-02 07:39:30,515 | INFO     | current chi2=2.9062651628833374 (change=38.55709688283506 %)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,515 | INFO     | sum of square deviations: 20598749010.0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,517 | INFO     | sum of deviations: 263402632705.99997
[2025-12-02 08:40:26] 2025-12-02 07:39:30,517 | INFO     | mean x: 1764648214.0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,517 | INFO     | mean y: 2383957.575308642
[2025-12-02 08:40:26] 2025-12-02 07:39:30,517 | INFO     | intersect: -22562723522.58719
[2025-12-02 08:40:26] 2025-12-02 07:39:30,517 | INFO     | chi2: 2.904033500350385
[2025-12-02 08:40:26] 2025-12-02 07:39:30,517 | INFO     | current chi2=2.904033500350385 (change=0.076787987601864 %)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,517 | INFO     | right removable region: 404
[2025-12-02 08:40:26] 2025-12-02 07:39:30,517 | INFO     | sum of square deviations: 21371126282.5
[2025-12-02 08:40:26] 2025-12-02 07:39:30,519 | INFO     | sum of deviations: 99131164660.00002
[2025-12-02 08:40:26] 2025-12-02 07:39:30,519 | INFO     | mean x: 1764648671.5
[2025-12-02 08:40:26] 2025-12-02 07:39:30,519 | INFO     | mean y: 2390816.9658536585
[2025-12-02 08:40:26] 2025-12-02 07:39:30,519 | INFO     | intersect: -8183030751.796372
[2025-12-02 08:40:26] 2025-12-02 07:39:30,519 | INFO     | chi2: 2.409901703243536
[2025-12-02 08:40:26] 2025-12-02 07:39:30,519 | INFO     | current chi2=2.409901703243536 (change=49.05098173238256 %)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,519 | INFO     | sum of square deviations: 20598749010.0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,521 | INFO     | sum of deviations: 60135325549.0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,521 | INFO     | mean x: 1764648824.0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,521 | INFO     | mean y: 2398480.002469136
[2025-12-02 08:40:26] 2025-12-02 07:39:30,521 | INFO     | intersect: -5149260558.096563
[2025-12-02 08:40:26] 2025-12-02 07:39:30,521 | INFO     | chi2: 1.9256866580707097
[2025-12-02 08:40:26] 2025-12-02 07:39:30,521 | INFO     | current chi2=1.9256866580707097 (change=20.092730110987983 %)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,521 | INFO     | left removable region: 20
[2025-12-02 08:40:26] 2025-12-02 07:39:30,521 | INFO     | sum of square deviations: 17557761760.0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | sum of deviations: 107256419285.4999
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | mean x: 1764648793.5
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | mean y: 2415737.0026041665
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | intersect: -10777427017.128008
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | chi2: 0.06018666921362677
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | current memory leak: 6.11 B/s (using 384 data points, chi2=0.06)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | could have reported an average CPU frequency of 3837 MHz (18 samples)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | ..............................
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | . Timing measurements:
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | . get job = 0 s
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | . initial setup = 1 s
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | . payload setup = 4 s
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | . stage-in = 0 s
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | . payload execution = 25272 s
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | . stage-out = 1 s
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | . log creation = 0 s
[2025-12-02 08:40:26] 2025-12-02 07:39:30,523 | INFO     | ..............................
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | 
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | job summary report
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | --------------------------------------------------
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | PanDA job id: 6894246573
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | task id: 47533962
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | errors: (none)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | pilot state: finished 
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | transexitcode: 0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | exeerrorcode: 0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | exeerrordiag: 
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | exitcode: 0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,563 | INFO     | exitmsg: OK
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | cpuconsumptiontime: 99119 s
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | nevents: 1000
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | neventsw: 0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | pid: 1612010
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | pgrp: 1612010
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | corecount: 4
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | event service: False
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | sizes: {0: 2284318, 3: 2284580, 11: 2284608, 25280: 2321823, 25281: 2330879, 25287: 2331069}
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | --------------------------------------------------
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | 
[2025-12-02 08:40:26] 2025-12-02 07:39:30,564 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | job 6894246573 has completed (purged errors)
[2025-12-02 08:40:26] 2025-12-02 07:39:30,583 | INFO     | overall cleanup function is called
[2025-12-02 08:40:26] 2025-12-02 07:39:31,590 | INFO     | --- collectZombieJob: --- 10, [1612010]
[2025-12-02 08:40:26] 2025-12-02 07:39:31,590 | INFO     | zombie collector waiting for pid 1612010
[2025-12-02 08:40:26] 2025-12-02 07:39:31,590 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 08:40:26] 2025-12-02 07:39:31,590 | INFO     | collected zombie processes
[2025-12-02 08:40:26] 2025-12-02 07:39:31,590 | INFO     | will attempt to kill all subprocesses of pid=1612010
[2025-12-02 08:40:26] 2025-12-02 07:39:31,638 | INFO     | process IDs to be killed: [1612010] (in reverse order)
[2025-12-02 08:40:26] 2025-12-02 07:39:31,671 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 08:40:26] 2025-12-02 07:39:31,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 08:40:26] 2025-12-02 07:39:31,673 | INFO     | did not find any defunct processes belonging to 1612010
[2025-12-02 08:40:26] 2025-12-02 07:39:31,675 | INFO     | did not find any defunct processes belonging to 1612010
[2025-12-02 08:40:26] 2025-12-02 07:39:31,675 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 08:40:26] 2025-12-02 07:39:31,675 | INFO     | ready for new job
[2025-12-02 08:40:26] 2025-12-02 07:39:31,675 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 08:40:26] 2025-12-02 07:39:31,677 | INFO     | ***************************************
[2025-12-02 08:40:26] 2025-12-02 07:39:31,677 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 08:40:26] 2025-12-02 07:39:31,677 | INFO     | ***************************************
[2025-12-02 08:40:26] 2025-12-02 07:39:31,677 | INFO     | 
[2025-12-02 08:40:26] 2025-12-02 07:39:31,677 | INFO     | architecture information:
[2025-12-02 08:40:26] 2025-12-02 07:39:31,677 | INFO     | executing command: cat /etc/os-release
[2025-12-02 08:40:26] 2025-12-02 07:39:31,691 | INFO     | cat /etc/os-release:
[2025-12-02 08:40:26] NAME="CentOS Linux"
[2025-12-02 08:40:26] VERSION="7 (Core)"
[2025-12-02 08:40:26] ID="centos"
[2025-12-02 08:40:26] ID_LIKE="rhel fedora"
[2025-12-02 08:40:26] VERSION_ID="7"
[2025-12-02 08:40:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 08:40:26] ANSI_COLOR="0;31"
[2025-12-02 08:40:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 08:40:26] HOME_URL="https://www.centos.org/"
[2025-12-02 08:40:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 08:40:26] 
[2025-12-02 08:40:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 08:40:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 08:40:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 08:40:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 08:40:26] 
[2025-12-02 08:40:26] 2025-12-02 07:39:31,691 | INFO     | ***************************************
[2025-12-02 08:40:26] 2025-12-02 07:39:32,195 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-02 08:40:26] 2025-12-02 07:39:32,212 | INFO     | sufficient remaining disk space (317981720576 B)
[2025-12-02 08:40:26] 2025-12-02 07:39:32,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 08:40:26] 2025-12-02 07:39:32,212 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 08:40:26] 2025-12-02 07:39:32,212 | INFO     | update_server=False
[2025-12-02 08:40:26] 2025-12-02 07:39:32,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 08:40:26] 2025-12-02 07:39:32,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 08:40:26] 2025-12-02 07:39:32,213 | INFO     | aborting loop
[2025-12-02 08:40:26] 2025-12-02 07:39:32,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 08:40:26] 2025-12-02 07:39:32,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 08:40:26] 2025-12-02 07:39:32,331 | INFO     | all payload control threads have been joined
[2025-12-02 08:40:26] 2025-12-02 07:39:32,551 | INFO     | all data control threads have been joined
[2025-12-02 08:40:26] 2025-12-02 07:39:33,214 | INFO     | [job] retrieve thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:33,218 | INFO     | [job] job monitor thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:33,218 | INFO     | [job] queue monitor thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:33,337 | INFO     | [payload] control thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:33,442 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:33,474 | INFO     | all job control threads have been joined
[2025-12-02 08:40:26] 2025-12-02 07:39:33,557 | INFO     | [data] control thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:33,722 | INFO     | [payload] validate_post thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:33,760 | INFO     | [payload] failed_post thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:33,810 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:34,079 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:34,241 | INFO     | [data] copytool_in thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:34,290 | INFO     | [data] copytool_out thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:34,480 | INFO     | [job] control thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:34,583 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:34,677 | INFO     | [job] validate thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:39:35,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 08:40:26] 2025-12-02 07:39:39,413 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 08:40:26] 2025-12-02 07:40:03,271 | INFO     | PID=1605437 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 08:40:26] 2025-12-02 07:40:03,271 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 08:40:26] 2025-12-02 07:40:03,271 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 08:40:26] 2025-12-02 07:40:03,271 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 08:40:26] 2025-12-02 07:40:20,105 | INFO     | [monitor] cgroup control has ended
[2025-12-02 08:40:26] 2025-12-02 07:40:21,085 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140720197793600)>', '<ExcThread(monitor, started 140719561893632)>']
[2025-12-02 08:40:26] 2025-12-02 07:40:21,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 08:40:26] 2025-12-02 07:40:21,367 | INFO     | [monitor] control thread has ended
[2025-12-02 08:40:26] 2025-12-02 07:40:26,111 | INFO     | all workflow threads have been joined
[2025-12-02 08:40:26] 2025-12-02 07:40:26,111 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 08:40:26] 2025-12-02 07:40:26,111 | INFO     | traces error code: 0
[2025-12-02 08:40:26] 2025-12-02 07:40:26,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 08:40:26] 2025-12-02 07:40:26,189 [wrapper] ==== pilot stdout END ====
[2025-12-02 08:40:26] 2025-12-02 07:40:26,193 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 08:40:26] 2025-12-02 07:40:26,197 [wrapper] pilotpid: 1605437
[2025-12-02 08:40:26] 2025-12-02 07:40:26,200 [wrapper] Pilot exit status: 0
[2025-12-02 08:40:26] 2025-12-02 07:40:26,211 [wrapper] pandaids: 6894246573
[2025-12-02 08:40:26] 2025-12-02 07:40:26,233 [wrapper] cleanup supervisor_pilot 1658553 1605438
[2025-12-02 08:40:26] 2025-12-02 07:40:26,238 [wrapper] Test setup, not cleaning
[2025-12-02 08:40:26] 2025-12-02 07:40:26,242 [wrapper] apfmon messages muted
[2025-12-02 08:40:26] 2025-12-02 07:40:26,245 [wrapper] ==== wrapper stdout END ====
[2025-12-02 08:40:26] 2025-12-02 07:40:26,249 [wrapper] ==== wrapper stderr END ====
[2025-12-02 08:40:26]  *** Error codes and diagnostics ***
[2025-12-02 08:40:26]     "exeErrorCode": 0,
[2025-12-02 08:40:26]     "exeErrorDiag": "",
[2025-12-02 08:40:26]     "pilotErrorCode": 0,
[2025-12-02 08:40:26]     "pilotErrorDiag": "",
[2025-12-02 08:40:26]  *** Listing of results directory ***
[2025-12-02 08:40:26] total 1325676
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc    576529 Nov 27 02:09 pilot3.tar.gz
[2025-12-02 08:40:26] -rwx------ 1 boinc boinc     36292 Nov 27 02:28 runpilot2-wrapper.sh
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc      5112 Nov 27 02:31 queuedata.json
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc       100 Dec  2 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 08:40:26] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 01:37 run_atlas
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc       105 Dec  2 01:37 job.xml
[2025-12-02 08:40:26] -rw-r--r-- 2 boinc boinc 408260116 Dec  2 01:37 EVNT.47493127._001030.pool.root.1
[2025-12-02 08:40:26] drwxrwx--x 2 boinc boinc      4096 Dec  2 01:37 shared
[2025-12-02 08:40:26] -rw-r--r-- 2 boinc boinc    590107 Dec  2 01:37 input.tar.gz
[2025-12-02 08:40:26] -rw-r--r-- 2 boinc boinc     15847 Dec  2 01:37 start_atlas.sh
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc         0 Dec  2 01:37 boinc_setup_complete
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc      6380 Dec  2 01:37 init_data.xml
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc         0 Dec  2 01:37 boinc_lockfile
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc      2787 Dec  2 01:37 pandaJob.out
[2025-12-02 08:40:26] -rw------- 1 boinc boinc    992024 Dec  2 01:37 agis_schedconf.cvmfs.json
[2025-12-02 08:40:26] drwx------ 5 boinc boinc      4096 Dec  2 01:37 pilot3
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc       531 Dec  2 08:35 boinc_task_state.xml
[2025-12-02 08:40:26] -rw------- 1 boinc boinc 935643150 Dec  2 08:39 HITS.47533962._000292.pool.root.1
[2025-12-02 08:40:26] -rw------- 1 boinc boinc        95 Dec  2 08:39 pilot_heartbeat.json
[2025-12-02 08:40:26] -rw------- 1 boinc boinc      1031 Dec  2 08:39 memory_monitor_summary.json
[2025-12-02 08:40:26] -rw------- 1 boinc boinc   1516240 Dec  2 08:39 agis_ddmendpoints.agis.ALL.json
[2025-12-02 08:40:26] -rw------- 1 boinc boinc   1266612 Dec  2 08:39 log.47533962._000292.job.log.tgz.1
[2025-12-02 08:40:26] -rw------- 1 boinc boinc      8590 Dec  2 08:39 heartbeat.json
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc      8192 Dec  2 08:40 boinc_mmap_file
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc        28 Dec  2 08:40 wrapper_checkpoint.txt
[2025-12-02 08:40:26] -rw------- 1 boinc boinc      4752 Dec  2 08:40 pilotlog.txt
[2025-12-02 08:40:26] -rw------- 1 boinc boinc   3568238 Dec  2 08:40 log.47533962._000292.job.log.1
[2025-12-02 08:40:26] -rw------- 1 boinc boinc       353 Dec  2 08:40 output.list
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc       620 Dec  2 08:40 runtime_log
[2025-12-02 08:40:26] -rw------- 1 boinc boinc   4853760 Dec  2 08:40 result.tar.gz
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc      8913 Dec  2 08:40 runtime_log.err
[2025-12-02 08:40:26] -rw------- 1 boinc boinc       668 Dec  2 08:40 FE1KDmmzfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaeNKDmFHcqOm.diag
[2025-12-02 08:40:26] -rw-r--r-- 1 boinc boinc     21239 Dec  2 08:40 stderr.txt
[2025-12-02 08:40:26] HITS file was successfully produced:
[2025-12-02 08:40:26] -rw------- 1 boinc boinc 935643150 Dec  2 08:39 shared/HITS.pool.root.1
[2025-12-02 08:40:26]  *** Contents of shared directory: ***
[2025-12-02 08:40:26] total 1317752
[2025-12-02 08:40:26] -rw-r--r-- 2 boinc boinc 408260116 Dec  2 01:37 ATLAS.root_0
[2025-12-02 08:40:26] -rw-r--r-- 2 boinc boinc    590107 Dec  2 01:37 input.tar.gz
[2025-12-02 08:40:26] -rw-r--r-- 2 boinc boinc     15847 Dec  2 01:37 start_atlas.sh
[2025-12-02 08:40:26] -rw------- 1 boinc boinc 935643150 Dec  2 08:39 HITS.pool.root.1
[2025-12-02 08:40:26] -rw------- 1 boinc boinc   4853760 Dec  2 08:40 result.tar.gz
08:40:28 (1601653): run_atlas exited; CPU time 99096.531823
08:40:28 (1601653): called boinc_finish(0)

</stderr_txt>
]]>

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