Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:50:39 (1543299): wrapper (7.7.26015): starting
18:50:39 (1543299): wrapper: running run_atlas (--nthreads 4)
[2025-12-01 18:50:39] Arguments: --nthreads 4
[2025-12-01 18:50:39] Threads: 4
[2025-12-01 18:50:39] Checking for CVMFS
[2025-12-01 18:50:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 18:50:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 18:50:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 18:50:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 18:50:39] 2.9.2.0 57880 10253 108180 153527 0 81 36733825 36864001 0 130560 1 4091880 99.981 381833 627 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-01 18:50:39] CVMFS is ok
[2025-12-01 18:50:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 18:50:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 18:50:39] Further information can be found at the LHC@home message board.
[2025-12-01 18:50:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 18:50:39] Checking for apptainer binary...
[2025-12-01 18:50:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 18:50:39] Running /usr/bin/apptainer --version
[2025-12-01 18:50:39] apptainer version 1.4.1-1.1
[2025-12-01 18:50:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 18:50:39] magicA254
[2025-12-01 18:50:39] apptainer works
[2025-12-01 18:50:39] Set ATHENA_PROC_NUMBER=4
[2025-12-01 18:50:39] Set ATHENA_CORE_NUMBER=4
[2025-12-01 18:50:39] Starting ATLAS job with PandaID=6899218309
[2025-12-01 18:50:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 01:37:36]  *** The last 200 lines of the pilot log: ***
[2025-12-02 01:37:36] 2025-12-02 00:37:03,554 | INFO     | number of running child processes to parent process 1553675: 1
[2025-12-02 01:37:36] 2025-12-02 00:37:03,554 | INFO     | maximum number of monitored processes: 10
[2025-12-02 01:37:36] 2025-12-02 00:37:03,908 | INFO     | PID=1547095 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 01:37:36] 2025-12-02 00:37:04,661 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 01:37:36] 2025-12-02 00:37:04,663 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3399.3437499999995
[2025-12-02 01:37:36] 2025-12-02 00:37:04,664 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6899218309/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,664 | INFO     | extracted standard info from prmon json
[2025-12-02 01:37:36] 2025-12-02 00:37:04,664 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 01:37:36] 2025-12-02 00:37:04,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 01:37:36] 2025-12-02 00:37:04,667 | INFO     | fitting pss+swap vs Time
[2025-12-02 01:37:36] 2025-12-02 00:37:04,667 | INFO     | sum of square deviations: 19845209300.0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,669 | INFO     | sum of deviations: 210137430174.49997
[2025-12-02 01:37:36] 2025-12-02 00:37:04,669 | INFO     | mean x: 1764623638.5
[2025-12-02 01:37:36] 2025-12-02 00:37:04,669 | INFO     | mean y: 2370734.7025
[2025-12-02 01:37:36] 2025-12-02 00:37:04,669 | INFO     | intersect: -18682918546.653976
[2025-12-02 01:37:36] 2025-12-02 00:37:04,669 | INFO     | chi2: 4.493477413887224
[2025-12-02 01:37:36] 2025-12-02 00:37:04,669 | INFO     | sum of square deviations: 19110274590.0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,671 | INFO     | sum of deviations: 279844470592.0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,671 | INFO     | mean x: 1764623486.0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,671 | INFO     | mean y: 2385131.0784810125
[2025-12-02 01:37:36] 2025-12-02 00:37:04,671 | INFO     | intersect: -25838171105.21365
[2025-12-02 01:37:36] 2025-12-02 00:37:04,671 | INFO     | chi2: 2.6534740029440114
[2025-12-02 01:37:36] 2025-12-02 00:37:04,671 | INFO     | current chi2=2.6534740029440114 (change=40.948317782940855 %)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,671 | INFO     | sum of square deviations: 18393712317.5
[2025-12-02 01:37:36] 2025-12-02 00:37:04,673 | INFO     | sum of deviations: 273499015650.50003
[2025-12-02 01:37:36] 2025-12-02 00:37:04,673 | INFO     | mean x: 1764623333.5
[2025-12-02 01:37:36] 2025-12-02 00:37:04,673 | INFO     | mean y: 2383780.8384615383
[2025-12-02 01:37:36] 2025-12-02 00:37:04,673 | INFO     | intersect: -26236079470.920723
[2025-12-02 01:37:36] 2025-12-02 00:37:04,673 | INFO     | chi2: 2.6521953066662123
[2025-12-02 01:37:36] 2025-12-02 00:37:04,673 | INFO     | current chi2=2.6521953066662123 (change=0.04818951594703322 %)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,673 | INFO     | right removable region: 389
[2025-12-02 01:37:36] 2025-12-02 00:37:04,673 | INFO     | sum of square deviations: 19110274590.0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,675 | INFO     | sum of deviations: 116497641827.00002
[2025-12-02 01:37:36] 2025-12-02 00:37:04,675 | INFO     | mean x: 1764623791.0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,675 | INFO     | mean y: 2390134.210126582
[2025-12-02 01:37:36] 2025-12-02 00:37:04,675 | INFO     | intersect: -10754886502.24876
[2025-12-02 01:37:36] 2025-12-02 00:37:04,675 | INFO     | chi2: 2.2958651163049346
[2025-12-02 01:37:36] 2025-12-02 00:37:04,675 | INFO     | current chi2=2.2958651163049346 (change=48.906717340795 %)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,675 | INFO     | sum of square deviations: 18393712317.5
[2025-12-02 01:37:36] 2025-12-02 00:37:04,676 | INFO     | sum of deviations: 83304701301.00003
[2025-12-02 01:37:36] 2025-12-02 00:37:04,676 | INFO     | mean x: 1764623943.5
[2025-12-02 01:37:36] 2025-12-02 00:37:04,676 | INFO     | mean y: 2397163.7435897435
[2025-12-02 01:37:36] 2025-12-02 00:37:04,676 | INFO     | intersect: -7989544211.897112
[2025-12-02 01:37:36] 2025-12-02 00:37:04,677 | INFO     | chi2: 1.9356475474275534
[2025-12-02 01:37:36] 2025-12-02 00:37:04,677 | INFO     | current chi2=1.9356475474275534 (change=15.689840240141418 %)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,677 | INFO     | left removable region: 20
[2025-12-02 01:37:36] 2025-12-02 00:37:04,677 | INFO     | sum of square deviations: 15579529320.0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,678 | INFO     | sum of deviations: 128734118546.0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,678 | INFO     | mean x: 1764623913.0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,678 | INFO     | mean y: 2415433.3956639566
[2025-12-02 01:37:36] 2025-12-02 00:37:04,678 | INFO     | intersect: -14578724942.496538
[2025-12-02 01:37:36] 2025-12-02 00:37:04,678 | INFO     | chi2: 0.06389726600119822
[2025-12-02 01:37:36] 2025-12-02 00:37:04,678 | INFO     | current memory leak: 8.26 B/s (using 369 data points, chi2=0.06)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | could have reported an average CPU frequency of 3842 MHz (17 samples)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | ..............................
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | . Timing measurements:
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | . get job = 0 s
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | . initial setup = 1 s
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | . payload setup = 4 s
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | . stage-in = 0 s
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | . payload execution = 24348 s
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | . stage-out = 1 s
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | . log creation = 0 s
[2025-12-02 01:37:36] 2025-12-02 00:37:04,679 | INFO     | ..............................
[2025-12-02 01:37:36] 2025-12-02 00:37:04,717 | INFO     | 
[2025-12-02 01:37:36] 2025-12-02 00:37:04,717 | INFO     | job summary report
[2025-12-02 01:37:36] 2025-12-02 00:37:04,717 | INFO     | --------------------------------------------------
[2025-12-02 01:37:36] 2025-12-02 00:37:04,717 | INFO     | PanDA job id: 6899218309
[2025-12-02 01:37:36] 2025-12-02 00:37:04,717 | INFO     | task id: 47556161
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | errors: (none)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | pilot state: finished 
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | transexitcode: 0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | exeerrorcode: 0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | exeerrordiag: 
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | exitcode: 0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | exitmsg: OK
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | cpuconsumptiontime: 95471 s
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | nevents: 1000
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | neventsw: 0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | pid: 1553675
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | pgrp: 1553675
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | corecount: 4
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | event service: False
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | sizes: {0: 2284313, 3: 2284575, 10: 2284603, 24356: 2321068, 24357: 2330068, 24358: 2330124, 24363: 2330562}
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | --------------------------------------------------
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | 
[2025-12-02 01:37:36] 2025-12-02 00:37:04,718 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-02 01:37:36] 2025-12-02 00:37:04,736 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,736 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,736 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,736 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | job 6899218309 has completed (purged errors)
[2025-12-02 01:37:36] 2025-12-02 00:37:04,737 | INFO     | overall cleanup function is called
[2025-12-02 01:37:36] 2025-12-02 00:37:05,747 | INFO     | --- collectZombieJob: --- 10, [1553675]
[2025-12-02 01:37:36] 2025-12-02 00:37:05,747 | INFO     | zombie collector waiting for pid 1553675
[2025-12-02 01:37:36] 2025-12-02 00:37:05,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 01:37:36] 2025-12-02 00:37:05,747 | INFO     | collected zombie processes
[2025-12-02 01:37:36] 2025-12-02 00:37:05,747 | INFO     | will attempt to kill all subprocesses of pid=1553675
[2025-12-02 01:37:36] 2025-12-02 00:37:05,795 | INFO     | process IDs to be killed: [1553675] (in reverse order)
[2025-12-02 01:37:36] 2025-12-02 00:37:05,828 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 01:37:36] 2025-12-02 00:37:05,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 01:37:36] 2025-12-02 00:37:05,830 | INFO     | did not find any defunct processes belonging to 1553675
[2025-12-02 01:37:36] 2025-12-02 00:37:05,832 | INFO     | did not find any defunct processes belonging to 1553675
[2025-12-02 01:37:36] 2025-12-02 00:37:05,832 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 01:37:36] 2025-12-02 00:37:05,832 | INFO     | ready for new job
[2025-12-02 01:37:36] 2025-12-02 00:37:05,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 01:37:36] 2025-12-02 00:37:05,834 | INFO     | ***************************************
[2025-12-02 01:37:36] 2025-12-02 00:37:05,834 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 01:37:36] 2025-12-02 00:37:05,834 | INFO     | ***************************************
[2025-12-02 01:37:36] 2025-12-02 00:37:05,834 | INFO     | 
[2025-12-02 01:37:36] 2025-12-02 00:37:05,834 | INFO     | architecture information:
[2025-12-02 01:37:36] 2025-12-02 00:37:05,835 | INFO     | executing command: cat /etc/os-release
[2025-12-02 01:37:36] 2025-12-02 00:37:05,848 | INFO     | cat /etc/os-release:
[2025-12-02 01:37:36] NAME="CentOS Linux"
[2025-12-02 01:37:36] VERSION="7 (Core)"
[2025-12-02 01:37:36] ID="centos"
[2025-12-02 01:37:36] ID_LIKE="rhel fedora"
[2025-12-02 01:37:36] VERSION_ID="7"
[2025-12-02 01:37:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 01:37:36] ANSI_COLOR="0;31"
[2025-12-02 01:37:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 01:37:36] HOME_URL="https://www.centos.org/"
[2025-12-02 01:37:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 01:37:36] 
[2025-12-02 01:37:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 01:37:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 01:37:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 01:37:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 01:37:36] 
[2025-12-02 01:37:36] 2025-12-02 00:37:05,848 | INFO     | ***************************************
[2025-12-02 01:37:36] 2025-12-02 00:37:06,352 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-02 01:37:36] 2025-12-02 00:37:06,367 | INFO     | sufficient remaining disk space (318426316800 B)
[2025-12-02 01:37:36] 2025-12-02 00:37:06,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 01:37:36] 2025-12-02 00:37:06,368 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 01:37:36] 2025-12-02 00:37:06,368 | INFO     | update_server=False
[2025-12-02 01:37:36] 2025-12-02 00:37:06,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 01:37:36] 2025-12-02 00:37:06,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 01:37:36] 2025-12-02 00:37:06,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 01:37:36] 2025-12-02 00:37:06,446 | INFO     | all job control threads have been joined
[2025-12-02 01:37:36] 2025-12-02 00:37:06,528 | INFO     | all data control threads have been joined
[2025-12-02 01:37:36] 2025-12-02 00:37:06,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 01:37:36] 2025-12-02 00:37:07,063 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 01:37:36] 2025-12-02 00:37:07,063 | INFO     | aborting loop
[2025-12-02 01:37:36] 2025-12-02 00:37:07,248 | INFO     | all payload control threads have been joined
[2025-12-02 01:37:36] 2025-12-02 00:37:07,373 | INFO     | [job] retrieve thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:07,374 | INFO     | [job] queue monitor thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:07,407 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:07,452 | INFO     | [job] control thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:07,534 | INFO     | [data] control thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:07,660 | INFO     | [job] validate thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:07,851 | INFO     | [payload] validate_post thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:08,069 | INFO     | [job] job monitor thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:08,139 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:08,218 | INFO     | [payload] failed_post thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:08,254 | INFO     | [payload] control thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:08,501 | INFO     | [data] copytool_in thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:08,724 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:08,725 | INFO     | [data] copytool_out thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:10,375 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:16,794 | INFO     | [monitor] cgroup control has ended
[2025-12-02 01:37:36] 2025-12-02 00:37:17,056 | INFO     | job.realtimelogging is not enabled
[2025-12-02 01:37:36] 2025-12-02 00:37:18,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 01:37:36] 2025-12-02 00:37:18,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752434349888)>', '<ExcThread(monitor, started 139751046768384)>']
[2025-12-02 01:37:36] 2025-12-02 00:37:23,526 | INFO     | all workflow threads have been joined
[2025-12-02 01:37:36] 2025-12-02 00:37:23,526 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 01:37:36] 2025-12-02 00:37:23,526 | INFO     | traces error code: 0
[2025-12-02 01:37:36] 2025-12-02 00:37:23,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 01:37:36] 2025-12-02 00:37:36,026 | INFO     | PID=1547095 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 01:37:36] 2025-12-02 00:37:36,026 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 01:37:36] 2025-12-02 00:37:36,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 01:37:36] 2025-12-02 00:37:36,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 01:37:36] 2025-12-02 00:37:36,026 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 01:37:36] 2025-12-02 00:37:36,026 | INFO     | [monitor] control thread has ended
[2025-12-02 01:37:36] 2025-12-02 00:37:36,101 [wrapper] ==== pilot stdout END ====
[2025-12-02 01:37:36] 2025-12-02 00:37:36,105 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 01:37:36] 2025-12-02 00:37:36,109 [wrapper] pilotpid: 1547095
[2025-12-02 01:37:36] 2025-12-02 00:37:36,113 [wrapper] Pilot exit status: 0
[2025-12-02 01:37:36] 2025-12-02 00:37:36,123 [wrapper] pandaids: 6899218309
[2025-12-02 01:37:36] 2025-12-02 00:37:36,145 [wrapper] cleanup supervisor_pilot 1599230 1547096
[2025-12-02 01:37:36] 2025-12-02 00:37:36,148 [wrapper] Test setup, not cleaning
[2025-12-02 01:37:36] 2025-12-02 00:37:36,152 [wrapper] apfmon messages muted
[2025-12-02 01:37:36] 2025-12-02 00:37:36,156 [wrapper] ==== wrapper stdout END ====
[2025-12-02 01:37:36] 2025-12-02 00:37:36,159 [wrapper] ==== wrapper stderr END ====
[2025-12-02 01:37:36]  *** Error codes and diagnostics ***
[2025-12-02 01:37:36]     "exeErrorCode": 0,
[2025-12-02 01:37:36]     "exeErrorDiag": "",
[2025-12-02 01:37:36]     "pilotErrorCode": 0,
[2025-12-02 01:37:36]     "pilotErrorDiag": "",
[2025-12-02 01:37:36]  *** Listing of results directory ***
[2025-12-02 01:37:36] total 1306984
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc    576529 Nov 27 02:09 pilot3.tar.gz
[2025-12-02 01:37:36] -rwx------ 1 boinc boinc     36292 Nov 27 02:26 runpilot2-wrapper.sh
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc      5112 Nov 27 02:27 queuedata.json
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc       100 Dec  1 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 01:37:36] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 18:50 run_atlas
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc       105 Dec  1 18:50 job.xml
[2025-12-02 01:37:36] -rw-r--r-- 2 boinc boinc 407310603 Dec  1 18:50 EVNT.47483658._002787.pool.root.1
[2025-12-02 01:37:36] drwxrwx--x 2 boinc boinc      4096 Dec  1 18:50 shared
[2025-12-02 01:37:36] -rw-r--r-- 2 boinc boinc    590108 Dec  1 18:50 input.tar.gz
[2025-12-02 01:37:36] -rw-r--r-- 2 boinc boinc     15847 Dec  1 18:50 start_atlas.sh
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc         0 Dec  1 18:50 boinc_setup_complete
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc      6380 Dec  1 18:50 init_data.xml
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc         0 Dec  1 18:50 boinc_lockfile
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc      2784 Dec  1 18:50 pandaJob.out
[2025-12-02 01:37:36] -rw------- 1 boinc boinc    991946 Dec  1 18:50 agis_schedconf.cvmfs.json
[2025-12-02 01:37:36] drwx------ 5 boinc boinc      4096 Dec  1 18:50 pilot3
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc       531 Dec  2 01:33 boinc_task_state.xml
[2025-12-02 01:37:36] -rw------- 1 boinc boinc 917743813 Dec  2 01:36 HITS.47556161._007691.pool.root.1
[2025-12-02 01:37:36] -rw------- 1 boinc boinc      1032 Dec  2 01:36 memory_monitor_summary.json
[2025-12-02 01:37:36] -rw------- 1 boinc boinc   1516240 Dec  2 01:36 agis_ddmendpoints.agis.ALL.json
[2025-12-02 01:37:36] -rw------- 1 boinc boinc   1249343 Dec  2 01:36 log.47556161._007691.job.log.tgz.1
[2025-12-02 01:37:36] -rw------- 1 boinc boinc        95 Dec  2 01:36 pilot_heartbeat.json
[2025-12-02 01:37:36] -rw------- 1 boinc boinc      8574 Dec  2 01:37 heartbeat.json
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc        28 Dec  2 01:37 wrapper_checkpoint.txt
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc      8192 Dec  2 01:37 boinc_mmap_file
[2025-12-02 01:37:36] -rw------- 1 boinc boinc       747 Dec  2 01:37 pilotlog.txt
[2025-12-02 01:37:36] -rw------- 1 boinc boinc   3439089 Dec  2 01:37 log.47556161._007691.job.log.1
[2025-12-02 01:37:36] -rw------- 1 boinc boinc       353 Dec  2 01:37 output.list
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc       620 Dec  2 01:37 runtime_log
[2025-12-02 01:37:36] -rw------- 1 boinc boinc   4710400 Dec  2 01:37 result.tar.gz
[2025-12-02 01:37:36] -rw------- 1 boinc boinc       668 Dec  2 01:37 t06LDmLxfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4VNKDmvE01yn.diag
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc      8913 Dec  2 01:37 runtime_log.err
[2025-12-02 01:37:36] -rw-r--r-- 1 boinc boinc     21304 Dec  2 01:37 stderr.txt
[2025-12-02 01:37:36] HITS file was successfully produced:
[2025-12-02 01:37:36] -rw------- 1 boinc boinc 917743813 Dec  2 01:36 shared/HITS.pool.root.1
[2025-12-02 01:37:36]  *** Contents of shared directory: ***
[2025-12-02 01:37:36] total 1299208
[2025-12-02 01:37:36] -rw-r--r-- 2 boinc boinc 407310603 Dec  1 18:50 ATLAS.root_0
[2025-12-02 01:37:36] -rw-r--r-- 2 boinc boinc    590108 Dec  1 18:50 input.tar.gz
[2025-12-02 01:37:36] -rw-r--r-- 2 boinc boinc     15847 Dec  1 18:50 start_atlas.sh
[2025-12-02 01:37:36] -rw------- 1 boinc boinc 917743813 Dec  2 01:36 HITS.pool.root.1
[2025-12-02 01:37:36] -rw------- 1 boinc boinc   4710400 Dec  2 01:37 result.tar.gz
01:37:37 (1543299): run_atlas exited; CPU time 95434.889403
01:37:37 (1543299): called boinc_finish(0)

</stderr_txt>
]]>

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