Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:58:03 (32022): wrapper (7.7.26015): starting
05:58:03 (32022): wrapper: running run_atlas (--nthreads 12)
[2025-11-28 05:58:03] Arguments: --nthreads 12
[2025-11-28 05:58:03] Threads: 12
[2025-11-28 05:58:03] Checking for CVMFS
[2025-11-28 05:58:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 05:58:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 05:58:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 05:58:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 05:58:03] 2.11.2.0 10903 8936 85644 153406 0 81 12113724 20275201 1 130560 0 3886255 99.850 785170 42718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 05:58:03] CVMFS is ok
[2025-11-28 05:58:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 05:58:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 05:58:03] Further information can be found at the LHC@home message board.
[2025-11-28 05:58:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 05:58:03] Checking for apptainer binary...
[2025-11-28 05:58:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 05:58:03] Running /usr/bin/apptainer --version
[2025-11-28 05:58:03] apptainer version 1.3.2-1.el7
[2025-11-28 05:58:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 05:58:05] c-205-22.aglt2.org
[2025-11-28 05:58:05] apptainer works
[2025-11-28 05:58:05] Set ATHENA_PROC_NUMBER=12
[2025-11-28 05:58:05] Set ATHENA_CORE_NUMBER=12
[2025-11-28 05:58:05] Starting ATLAS job with PandaID=6894252965
[2025-11-28 05:58:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 13:06:08]  *** The last 200 lines of the pilot log: ***
[2025-11-28 13:06:08] 2025-11-28 18:05:08,713 | INFO     | monitor loop #1919: job 0:6894252965 is in state 'finished'
[2025-11-28 13:06:08] 2025-11-28 18:05:08,713 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 13:06:08] 2025-11-28 18:05:08,713 | INFO     | time since job start (25608s) is within the limit (172800.0s)
[2025-11-28 13:06:08] 2025-11-28 18:05:10,719 | INFO     | time since job start (25610s) is within the limit (172800.0s)
[2025-11-28 13:06:08] 2025-11-28 18:05:10,956 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 13:06:08] 2025-11-28 18:05:10,960 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1784.5
[2025-11-28 13:06:08] 2025-11-28 18:05:10,963 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6894252965/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 13:06:08] 2025-11-28 18:05:10,964 | INFO     | extracted standard info from prmon json
[2025-11-28 13:06:08] 2025-11-28 18:05:10,964 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 13:06:08] 2025-11-28 18:05:10,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 13:06:08] 2025-11-28 18:05:10,971 | INFO     | fitting pss+swap vs Time
[2025-11-28 13:06:08] 2025-11-28 18:05:10,972 | INFO     | sum of square deviations: 22973326405.247696
[2025-11-28 13:06:08] 2025-11-28 18:05:10,975 | INFO     | sum of deviations: 412082210099.30396
[2025-11-28 13:06:08] 2025-11-28 18:05:10,975 | INFO     | mean x: 1764340308.7476192
[2025-11-28 13:06:08] 2025-11-28 18:05:10,976 | INFO     | mean y: 3434474.3047619048
[2025-11-28 13:06:08] 2025-11-28 18:05:10,976 | INFO     | intersect: -31644279094.503
[2025-11-28 13:06:08] 2025-11-28 18:05:10,976 | INFO     | chi2: 5.72390076508977
[2025-11-28 13:06:08] 2025-11-28 18:05:10,977 | INFO     | sum of square deviations: 22162608039.93734
[2025-11-28 13:06:08] 2025-11-28 18:05:10,980 | INFO     | sum of deviations: 576869305007.3007
[2025-11-28 13:06:08] 2025-11-28 18:05:10,981 | INFO     | mean x: 1764340156.2506025
[2025-11-28 13:06:08] 2025-11-28 18:05:10,981 | INFO     | mean y: 3465439.795180723
[2025-11-28 13:06:08] 2025-11-28 18:05:10,981 | INFO     | intersect: -45920447391.162186
[2025-11-28 13:06:08] 2025-11-28 18:05:10,981 | INFO     | chi2: 2.6048952410895114
[2025-11-28 13:06:08] 2025-11-28 18:05:10,981 | INFO     | current chi2=2.6048952410895114 (change=54.490908420760185 %)
[2025-11-28 13:06:08] 2025-11-28 18:05:10,982 | INFO     | sum of square deviations: 21371192362.119465
[2025-11-28 13:06:08] 2025-11-28 18:05:10,986 | INFO     | sum of deviations: 594145888124.8386
[2025-11-28 13:06:08] 2025-11-28 18:05:10,986 | INFO     | mean x: 1764340003.7536585
[2025-11-28 13:06:08] 2025-11-28 18:05:10,986 | INFO     | mean y: 3468736.1073170733
[2025-11-28 13:06:08] 2025-11-28 18:05:10,986 | INFO     | intersect: -49047390978.32169
[2025-11-28 13:06:08] 2025-11-28 18:05:10,986 | INFO     | chi2: 2.4242136744472815
[2025-11-28 13:06:08] 2025-11-28 18:05:10,986 | INFO     | current chi2=2.4242136744472815 (change=6.93623159166504 %)
[2025-11-28 13:06:08] 2025-11-28 18:05:10,987 | INFO     | right removable region: 409
[2025-11-28 13:06:08] 2025-11-28 18:05:10,987 | INFO     | sum of square deviations: 22162570097.436134
[2025-11-28 13:06:08] 2025-11-28 18:05:10,991 | INFO     | sum of deviations: 277262645612.301
[2025-11-28 13:06:08] 2025-11-28 18:05:10,991 | INFO     | mean x: 1764340461.2481928
[2025-11-28 13:06:08] 2025-11-28 18:05:10,991 | INFO     | mean y: 3459748.734939759
[2025-11-28 13:06:08] 2025-11-28 18:05:10,991 | INFO     | intersect: -22069147439.683727
[2025-11-28 13:06:08] 2025-11-28 18:05:10,992 | INFO     | chi2: 3.4843437185636006
[2025-11-28 13:06:08] 2025-11-28 18:05:10,992 | INFO     | current chi2=3.4843437185636006 (change=39.126412885864305 %)
[2025-11-28 13:06:08] 2025-11-28 18:05:10,992 | INFO     | sum of square deviations: 21371091284.62441
[2025-11-28 13:06:08] 2025-11-28 18:05:10,996 | INFO     | sum of deviations: 245264725292.47308
[2025-11-28 13:06:08] 2025-11-28 18:05:10,996 | INFO     | mean x: 1764340613.7512195
[2025-11-28 13:06:08] 2025-11-28 18:05:10,996 | INFO     | mean y: 3465907.5536585366
[2025-11-28 13:06:08] 2025-11-28 18:05:10,996 | INFO     | intersect: -20244939295.103325
[2025-11-28 13:06:08] 2025-11-28 18:05:10,997 | INFO     | chi2: 3.439581973759526
[2025-11-28 13:06:08] 2025-11-28 18:05:10,997 | INFO     | current chi2=3.439581973759526 (change=1.2846535364923024 %)
[2025-11-28 13:06:08] 2025-11-28 18:05:10,997 | INFO     | left removable region: 20
[2025-11-28 13:06:08] 2025-11-28 18:05:10,997 | INFO     | sum of square deviations: 18252579407.2544
[2025-11-28 13:06:08] 2025-11-28 18:05:11,000 | INFO     | sum of deviations: 373430549627.2184
[2025-11-28 13:06:08] 2025-11-28 18:05:11,001 | INFO     | mean x: 1764340583.2622108
[2025-11-28 13:06:08] 2025-11-28 18:05:11,001 | INFO     | mean y: 3512210.1645244216
[2025-11-28 13:06:08] 2025-11-28 18:05:11,001 | INFO     | intersect: -36093231106.85697
[2025-11-28 13:06:08] 2025-11-28 18:05:11,001 | INFO     | chi2: 0.07112856201011258
[2025-11-28 13:06:08] 2025-11-28 18:05:11,001 | INFO     | current memory leak: 20.46 B/s (using 389 data points, chi2=0.07)
[2025-11-28 13:06:08] 2025-11-28 18:05:11,002 | INFO     | could have reported an average CPU frequency of 2368 MHz (18 samples)
[2025-11-28 13:06:08] 2025-11-28 18:05:11,002 | INFO     | ..............................
[2025-11-28 13:06:08] 2025-11-28 18:05:11,002 | INFO     | . Timing measurements:
[2025-11-28 13:06:08] 2025-11-28 18:05:11,002 | INFO     | . get job = 0 s
[2025-11-28 13:06:08] 2025-11-28 18:05:11,002 | INFO     | . initial setup = 2 s
[2025-11-28 13:06:08] 2025-11-28 18:05:11,002 | INFO     | . payload setup = 7 s
[2025-11-28 13:06:08] 2025-11-28 18:05:11,002 | INFO     | . stage-in = 0 s
[2025-11-28 13:06:08] 2025-11-28 18:05:11,003 | INFO     | . payload execution = 25570 s
[2025-11-28 13:06:08] 2025-11-28 18:05:11,003 | INFO     | . stage-out = 3 s
[2025-11-28 13:06:08] 2025-11-28 18:05:11,003 | INFO     | . log creation = 0 s
[2025-11-28 13:06:08] 2025-11-28 18:05:11,003 | INFO     | ..............................
[2025-11-28 13:06:08] 2025-11-28 18:05:11,084 | INFO     | 
[2025-11-28 13:06:08] 2025-11-28 18:05:11,085 | INFO     | job summary report
[2025-11-28 13:06:08] 2025-11-28 18:05:11,085 | INFO     | --------------------------------------------------
[2025-11-28 13:06:08] 2025-11-28 18:05:11,085 | INFO     | PanDA job id: 6894252965
[2025-11-28 13:06:08] 2025-11-28 18:05:11,085 | INFO     | task id: 47533962
[2025-11-28 13:06:08] 2025-11-28 18:05:11,085 | INFO     | errors: (none)
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | pilot state: finished 
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | transexitcode: 0
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | exeerrorcode: 0
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | exeerrordiag: 
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | exitcode: 0
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | exitmsg: OK
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | cpuconsumptiontime: 294157 s
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | nevents: 1000
[2025-11-28 13:06:08] 2025-11-28 18:05:11,086 | INFO     | neventsw: 0
[2025-11-28 13:06:08] 2025-11-28 18:05:11,087 | INFO     | pid: 9902
[2025-11-28 13:06:08] 2025-11-28 18:05:11,087 | INFO     | pgrp: 9902
[2025-11-28 13:06:08] 2025-11-28 18:05:11,087 | INFO     | corecount: 12
[2025-11-28 13:06:08] 2025-11-28 18:05:11,087 | INFO     | event service: False
[2025-11-28 13:06:08] 2025-11-28 18:05:11,087 | INFO     | sizes: {0: 2283486, 1: 2284342, 6: 2284604, 12: 2284632, 25581: 2321811, 25585: 2330805, 25588: 2330989, 25595: 2331235}
[2025-11-28 13:06:08] 2025-11-28 18:05:11,087 | INFO     | --------------------------------------------------
[2025-11-28 13:06:08] 2025-11-28 18:05:11,087 | INFO     | 
[2025-11-28 13:06:08] 2025-11-28 18:05:11,087 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 13:06:08] 2025-11-28 18:05:11,111 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,111 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,111 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,112 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,114 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,114 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,114 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,114 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 13:06:08] 2025-11-28 18:05:11,114 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,114 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 13:06:08] 2025-11-28 18:05:11,115 | INFO     | job 6894252965 has completed (purged errors)
[2025-11-28 13:06:08] 2025-11-28 18:05:11,115 | INFO     | overall cleanup function is called
[2025-11-28 13:06:08] 2025-11-28 18:05:12,131 | INFO     | --- collectZombieJob: --- 10, [9902]
[2025-11-28 13:06:08] 2025-11-28 18:05:12,132 | INFO     | zombie collector waiting for pid 9902
[2025-11-28 13:06:08] 2025-11-28 18:05:12,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 13:06:08] 2025-11-28 18:05:12,132 | INFO     | collected zombie processes
[2025-11-28 13:06:08] 2025-11-28 18:05:12,132 | INFO     | will attempt to kill all subprocesses of pid=9902
[2025-11-28 13:06:08] 2025-11-28 18:05:12,225 | INFO     | process IDs to be killed: [9902] (in reverse order)
[2025-11-28 13:06:08] 2025-11-28 18:05:12,279 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 13:06:08] 2025-11-28 18:05:12,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 13:06:08] 2025-11-28 18:05:12,283 | INFO     | did not find any defunct processes belonging to 9902
[2025-11-28 13:06:08] 2025-11-28 18:05:12,287 | INFO     | did not find any defunct processes belonging to 9902
[2025-11-28 13:06:08] 2025-11-28 18:05:12,289 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 13:06:08] 2025-11-28 18:05:12,289 | INFO     | ready for new job
[2025-11-28 13:06:08] 2025-11-28 18:05:12,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 13:06:08] 2025-11-28 18:05:12,291 | INFO     | ***************************************
[2025-11-28 13:06:08] 2025-11-28 18:05:12,291 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 13:06:08] 2025-11-28 18:05:12,292 | INFO     | ***************************************
[2025-11-28 13:06:08] 2025-11-28 18:05:12,292 | INFO     | 
[2025-11-28 13:06:08] 2025-11-28 18:05:12,292 | INFO     | architecture information:
[2025-11-28 13:06:08] 2025-11-28 18:05:12,293 | INFO     | executing command: cat /etc/os-release
[2025-11-28 13:06:08] 2025-11-28 18:05:12,308 | INFO     | cat /etc/os-release:
[2025-11-28 13:06:08] NAME="CentOS Linux"
[2025-11-28 13:06:08] VERSION="7 (Core)"
[2025-11-28 13:06:08] ID="centos"
[2025-11-28 13:06:08] ID_LIKE="rhel fedora"
[2025-11-28 13:06:08] VERSION_ID="7"
[2025-11-28 13:06:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 13:06:08] ANSI_COLOR="0;31"
[2025-11-28 13:06:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 13:06:08] HOME_URL="https://www.centos.org/"
[2025-11-28 13:06:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 13:06:08] 
[2025-11-28 13:06:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 13:06:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 13:06:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 13:06:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 13:06:08] 
[2025-11-28 13:06:08] 2025-11-28 18:05:12,308 | INFO     | ***************************************
[2025-11-28 13:06:08] 2025-11-28 18:05:12,811 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 13:06:08] 2025-11-28 18:05:12,827 | INFO     | sufficient remaining disk space (28243394560 B)
[2025-11-28 13:06:08] 2025-11-28 18:05:12,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 13:06:08] 2025-11-28 18:05:12,827 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 13:06:08] 2025-11-28 18:05:12,828 | INFO     | update_server=False
[2025-11-28 13:06:08] 2025-11-28 18:05:12,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 13:06:08] 2025-11-28 18:05:12,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:06:08] 2025-11-28 18:05:12,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 13:06:08] 2025-11-28 18:05:12,829 | INFO     | aborting loop
[2025-11-28 13:06:08] 2025-11-28 18:05:13,234 | INFO     | all data control threads have been joined
[2025-11-28 13:06:08] 2025-11-28 18:05:13,534 | INFO     | all payload control threads have been joined
[2025-11-28 13:06:08] 2025-11-28 18:05:13,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 13:06:08] 2025-11-28 18:05:13,832 | INFO     | [job] retrieve thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:13,832 | INFO     | [job] job monitor thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:13,834 | INFO     | [job] queue monitor thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,139 | INFO     | all job control threads have been joined
[2025-11-28 13:06:08] 2025-11-28 18:05:14,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 13:06:08] 2025-11-28 18:05:14,240 | INFO     | [data] control thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,243 | INFO     | [job] validate thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,305 | INFO     | [data] copytool_in thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,325 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,365 | INFO     | [payload] validate_post thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,540 | INFO     | [payload] control thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,546 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,659 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,768 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:14,821 | INFO     | [payload] failed_post thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:15,144 | INFO     | [job] control thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:15,719 | INFO     | [data] copytool_out thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:18,216 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 13:06:08] 2025-11-28 18:05:43,921 | INFO     | PID=3413 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-28 13:06:08] 2025-11-28 18:05:43,922 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 13:06:08] 2025-11-28 18:05:43,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 13:06:08] 2025-11-28 18:05:43,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 13:06:08] 2025-11-28 18:06:01,719 | INFO     | [monitor] cgroup control has ended
[2025-11-28 13:06:08] 2025-11-28 18:06:02,793 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139906077009728)>', '<ExcThread(monitor, started 139905304868608)>']
[2025-11-28 13:06:08] 2025-11-28 18:06:03,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 13:06:08] 2025-11-28 18:06:03,019 | INFO     | [monitor] control thread has ended
[2025-11-28 13:06:08] 2025-11-28 18:06:07,800 | INFO     | all workflow threads have been joined
[2025-11-28 13:06:08] 2025-11-28 18:06:07,800 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 13:06:08] 2025-11-28 18:06:07,800 | INFO     | traces error code: 0
[2025-11-28 13:06:08] 2025-11-28 18:06:07,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 13:06:08] 2025-11-28 18:06:07,898 [wrapper] ==== pilot stdout END ====
[2025-11-28 13:06:08] 2025-11-28 18:06:07,902 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 13:06:08] 2025-11-28 18:06:07,906 [wrapper] pilotpid: 3413
[2025-11-28 13:06:08] 2025-11-28 18:06:07,910 [wrapper] Pilot exit status: 0
[2025-11-28 13:06:08] 2025-11-28 18:06:07,924 [wrapper] pandaids: 6894252965
[2025-11-28 13:06:08] 2025-11-28 18:06:07,970 [wrapper] cleanup supervisor_pilot  4025 3414
[2025-11-28 13:06:08] 2025-11-28 18:06:07,974 [wrapper] Test setup, not cleaning
[2025-11-28 13:06:08] 2025-11-28 18:06:07,978 [wrapper] apfmon messages muted
[2025-11-28 13:06:08] 2025-11-28 18:06:07,982 [wrapper] ==== wrapper stdout END ====
[2025-11-28 13:06:08] 2025-11-28 18:06:07,985 [wrapper] ==== wrapper stderr END ====
[2025-11-28 13:06:08]  *** Error codes and diagnostics ***
[2025-11-28 13:06:08]     "exeErrorCode": 0,
[2025-11-28 13:06:08]     "exeErrorDiag": "",
[2025-11-28 13:06:08]     "pilotErrorCode": 0,
[2025-11-28 13:06:08]     "pilotErrorDiag": "",
[2025-11-28 13:06:08]  *** Listing of results directory ***
[2025-11-28 13:06:08] total 1315376
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas    576529 Nov 27 11:16 pilot3.tar.gz
[2025-11-28 13:06:08] -rwx------ 1 boincer umatlas     36292 Nov 27 11:19 runpilot2-wrapper.sh
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas      5112 Nov 27 11:20 queuedata.json
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas       100 Nov 28 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 13:06:08] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 05:58 run_atlas
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas       105 Nov 28 05:58 job.xml
[2025-11-28 13:06:08] -rw-r--r-- 2 boincer umatlas 410005869 Nov 28 05:58 EVNT.47493127._001046.pool.root.1
[2025-11-28 13:06:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 05:58 start_atlas.sh
[2025-11-28 13:06:08] drwxrwx--x 2 boincer umatlas      4096 Nov 28 05:58 shared
[2025-11-28 13:06:08] -rw-r--r-- 2 boincer umatlas    590107 Nov 28 05:58 input.tar.gz
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas         0 Nov 28 05:58 boinc_lockfile
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas      2786 Nov 28 05:58 pandaJob.out
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas        57 Nov 28 05:58 setup.sh.local
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas    991856 Nov 28 05:58 agis_schedconf.cvmfs.json
[2025-11-28 13:06:08] drwx------ 5 boincer umatlas      4096 Nov 28 05:58 pilot3
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas       533 Nov 28 12:56 boinc_task_state.xml
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas      5956 Nov 28 13:03 init_data.xml
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas 921502831 Nov 28 13:04 HITS.47533962._000452.pool.root.1
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas      1064 Nov 28 13:04 memory_monitor_summary.json
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas   1516240 Nov 28 13:04 agis_ddmendpoints.agis.ALL.json
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas   2168643 Nov 28 13:05 log.47533962._000452.job.log.tgz.1
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas      8678 Nov 28 13:05 heartbeat.json
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas        29 Nov 28 13:05 wrapper_checkpoint.txt
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 13:05 boinc_mmap_file
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas        95 Nov 28 13:05 pilot_heartbeat.json
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas      4745 Nov 28 13:06 pilotlog.txt
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas   3585671 Nov 28 13:06 log.47533962._000452.job.log.1
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas       353 Nov 28 13:06 output.list
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas       620 Nov 28 13:06 runtime_log
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas   5775360 Nov 28 13:06 result.tar.gz
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas      9345 Nov 28 13:06 runtime_log.err
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas       670 Nov 28 13:06 0B0NDmgtti8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsoKKDmzbvGGn.diag
[2025-11-28 13:06:08] -rw-r--r-- 1 boincer umatlas     21309 Nov 28 13:06 stderr.txt
[2025-11-28 13:06:08] HITS file was successfully produced:
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas 921502831 Nov 28 13:04 shared/HITS.pool.root.1
[2025-11-28 13:06:08]  *** Contents of shared directory: ***
[2025-11-28 13:06:08] total 1306552
[2025-11-28 13:06:08] -rw-r--r-- 2 boincer umatlas 410005869 Nov 28 05:58 ATLAS.root_0
[2025-11-28 13:06:08] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 05:58 start_atlas.sh
[2025-11-28 13:06:08] -rw-r--r-- 2 boincer umatlas    590107 Nov 28 05:58 input.tar.gz
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas 921502831 Nov 28 13:04 HITS.pool.root.1
[2025-11-28 13:06:08] -rw------- 1 boincer umatlas   5775360 Nov 28 13:06 result.tar.gz
13:06:09 (32022): run_atlas exited; CPU time 287276.465875
13:06:09 (32022): called boinc_finish(0)

</stderr_txt>
]]>

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