Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:27:07 (1205163): wrapper (7.7.26015): starting
20:27:07 (1205163): wrapper: running run_atlas (--nthreads 4)
[2025-12-02 20:27:07] Arguments: --nthreads 4
[2025-12-02 20:27:07] Threads: 4
[2025-12-02 20:27:07] Checking for CVMFS
[2025-12-02 20:27:07] No cvmfs_config command found, will try listing directly
[2025-12-02 20:27:07] CVMFS is ok
[2025-12-02 20:27:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 20:27:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 20:27:07] Further information can be found at the LHC@home message board.
[2025-12-02 20:27:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 20:27:07] Checking for apptainer binary...
[2025-12-02 20:27:07] which: no apptainer in ((null))
[2025-12-02 20:27:07] apptainer is not installed, using version from CVMFS
[2025-12-02 20:27:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 20:27:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-12-02 20:27:07] apptainer works
[2025-12-02 20:27:07] Set ATHENA_PROC_NUMBER=4
[2025-12-02 20:27:07] Set ATHENA_CORE_NUMBER=4
[2025-12-02 20:27:07] Starting ATLAS job with PandaID=6900215213
[2025-12-02 20:27:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 12:29:13]  *** The last 200 lines of the pilot log: ***
[2025-12-03 12:29:13] 2025-12-03 11:17:52,678 | INFO     | time since job start (57027s) is within the limit (172800.0s)
[2025-12-03 12:29:13] 2025-12-03 11:17:52,974 | INFO     | monitor loop #3817: job 0:6900215213 is in state 'finished'
[2025-12-03 12:29:13] 2025-12-03 11:17:52,974 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,050 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 12:29:13] 2025-12-03 11:17:53,071 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2649.3473515625005
[2025-12-03 12:29:13] 2025-12-03 11:17:53,096 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6900215213/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,097 | INFO     | extracted standard info from prmon json
[2025-12-03 12:29:13] 2025-12-03 11:17:53,097 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 12:29:13] 2025-12-03 11:17:53,097 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 12:29:13] 2025-12-03 11:17:53,114 | INFO     | fitting pss+swap vs Time
[2025-12-03 12:29:13] 2025-12-03 11:17:53,115 | INFO     | sum of square deviations: 252649623321.43155
[2025-12-03 12:29:13] 2025-12-03 11:17:53,135 | INFO     | sum of deviations: 519029300423.81226
[2025-12-03 12:29:13] 2025-12-03 11:17:53,136 | INFO     | mean x: 1764732137.5085654
[2025-12-03 12:29:13] 2025-12-03 11:17:53,136 | INFO     | mean y: 2274237.2109207707
[2025-12-03 12:29:13] 2025-12-03 11:17:53,136 | INFO     | intersect: -3623093078.699074
[2025-12-03 12:29:13] 2025-12-03 11:17:53,137 | INFO     | chi2: 4.153877375426247
[2025-12-03 12:29:13] 2025-12-03 11:17:53,138 | INFO     | sum of square deviations: 248613764043.93118
[2025-12-03 12:29:13] 2025-12-03 11:17:53,158 | INFO     | sum of deviations: 703110586360.3513
[2025-12-03 12:29:13] 2025-12-03 11:17:53,159 | INFO     | mean x: 1764731985.0086114
[2025-12-03 12:29:13] 2025-12-03 11:17:53,159 | INFO     | mean y: 2281187.7061356297
[2025-12-03 12:29:13] 2025-12-03 11:17:53,159 | INFO     | intersect: -4988599930.722272
[2025-12-03 12:29:13] 2025-12-03 11:17:53,160 | INFO     | chi2: 2.2404041565983466
[2025-12-03 12:29:13] 2025-12-03 11:17:53,160 | INFO     | current chi2=2.2404041565983466 (change=46.06474977205004 %)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,161 | INFO     | sum of square deviations: 244621114878.93103
[2025-12-03 12:29:13] 2025-12-03 11:17:53,179 | INFO     | sum of deviations: 760901612935.6659
[2025-12-03 12:29:13] 2025-12-03 11:17:53,179 | INFO     | mean x: 1764731832.508658
[2025-12-03 12:29:13] 2025-12-03 11:17:53,179 | INFO     | mean y: 2283392.979437229
[2025-12-03 12:29:13] 2025-12-03 11:17:53,179 | INFO     | intersect: -5486970052.780261
[2025-12-03 12:29:13] 2025-12-03 11:17:53,180 | INFO     | chi2: 2.0020163865692724
[2025-12-03 12:29:13] 2025-12-03 11:17:53,181 | INFO     | current chi2=2.0020163865692724 (change=10.640391347560406 %)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,181 | INFO     | right removable region: 923
[2025-12-03 12:29:13] 2025-12-03 11:17:53,182 | INFO     | sum of square deviations: 248613759163.9311
[2025-12-03 12:29:13] 2025-12-03 11:17:53,201 | INFO     | sum of deviations: 349510060084.5743
[2025-12-03 12:29:13] 2025-12-03 11:17:53,201 | INFO     | mean x: 1764732290.0086114
[2025-12-03 12:29:13] 2025-12-03 11:17:53,201 | INFO     | mean y: 2280630.6781485467
[2025-12-03 12:29:13] 2025-12-03 11:17:53,201 | INFO     | intersect: -2478642753.40293
[2025-12-03 12:29:13] 2025-12-03 11:17:53,202 | INFO     | chi2: 2.2759406247185225
[2025-12-03 12:29:13] 2025-12-03 11:17:53,202 | INFO     | current chi2=2.2759406247185225 (change=45.20924863640255 %)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,203 | INFO     | sum of square deviations: 244621105118.9311
[2025-12-03 12:29:13] 2025-12-03 11:17:53,223 | INFO     | sum of deviations: 337439207736.238
[2025-12-03 12:29:13] 2025-12-03 11:17:53,223 | INFO     | mean x: 1764732442.508658
[2025-12-03 12:29:13] 2025-12-03 11:17:53,223 | INFO     | mean y: 2281091.095238095
[2025-12-03 12:29:13] 2025-12-03 11:17:53,223 | INFO     | intersect: -2432054723.7848372
[2025-12-03 12:29:13] 2025-12-03 11:17:53,224 | INFO     | chi2: 2.2731793972554257
[2025-12-03 12:29:13] 2025-12-03 11:17:53,225 | INFO     | current chi2=2.2731793972554257 (change=0.12132247357895425 %)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,225 | INFO     | left removable region: 20
[2025-12-03 12:29:13] 2025-12-03 11:17:53,226 | INFO     | sum of square deviations: 228318574823.92908
[2025-12-03 12:29:13] 2025-12-03 11:17:53,245 | INFO     | sum of deviations: 575657352269.3419
[2025-12-03 12:29:13] 2025-12-03 11:17:53,245 | INFO     | mean x: 1764732412.0088594
[2025-12-03 12:29:13] 2025-12-03 11:17:53,245 | INFO     | mean y: 2290781.3322259136
[2025-12-03 12:29:13] 2025-12-03 11:17:53,245 | INFO     | intersect: -4447111500.30132
[2025-12-03 12:29:13] 2025-12-03 11:17:53,246 | INFO     | chi2: 0.1002518419909426
[2025-12-03 12:29:13] 2025-12-03 11:17:53,246 | INFO     | current memory leak: 2.52 B/s (using 903 data points, chi2=0.10)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | could have reported an average CPU frequency of 2668 MHz (35 samples)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | ..............................
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | . Timing measurements:
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | . get job = 0 s
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | . initial setup = 1 s
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | . payload setup = 9 s
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | . stage-in = 0 s
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | . payload execution = 56981 s
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | . stage-out = 2 s
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | . log creation = 0 s
[2025-12-03 12:29:13] 2025-12-03 11:17:53,248 | INFO     | ..............................
[2025-12-03 12:29:13] 2025-12-03 11:17:53,350 | INFO     | 
[2025-12-03 12:29:13] 2025-12-03 11:17:53,350 | INFO     | job summary report
[2025-12-03 12:29:13] 2025-12-03 11:17:53,350 | INFO     | --------------------------------------------------
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | PanDA job id: 6900215213
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | task id: 47556185
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | errors: (none)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | pilot state: finished 
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | transexitcode: 0
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | exeerrorcode: 0
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | exeerrordiag: 
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | exitcode: 0
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | exitmsg: OK
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | cpuconsumptiontime: 224093 s
[2025-12-03 12:29:13] 2025-12-03 11:17:53,351 | INFO     | nevents: 1000
[2025-12-03 12:29:13] 2025-12-03 11:17:53,352 | INFO     | neventsw: 0
[2025-12-03 12:29:13] 2025-12-03 11:17:53,352 | INFO     | pid: 1217093
[2025-12-03 12:29:13] 2025-12-03 11:17:53,352 | INFO     | pgrp: 1217093
[2025-12-03 12:29:13] 2025-12-03 11:17:53,352 | INFO     | corecount: 4
[2025-12-03 12:29:13] 2025-12-03 11:17:53,352 | INFO     | event service: False
[2025-12-03 12:29:13] 2025-12-03 11:17:53,352 | INFO     | sizes: {0: 2284322, 7: 2284584, 11: 2284612, 56994: 2338645, 56997: 2347663, 57000: 2347719, 57010: 2348093}
[2025-12-03 12:29:13] 2025-12-03 11:17:53,352 | INFO     | --------------------------------------------------
[2025-12-03 12:29:13] 2025-12-03 11:17:53,352 | INFO     | 
[2025-12-03 12:29:13] 2025-12-03 11:17:53,352 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-12-03 12:29:13] 2025-12-03 11:17:53,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 12:29:13] 2025-12-03 11:17:53,387 | INFO     | job 6900215213 has completed (purged errors)
[2025-12-03 12:29:13] 2025-12-03 11:17:53,387 | INFO     | overall cleanup function is called
[2025-12-03 12:29:13] 2025-12-03 11:17:54,402 | INFO     | --- collectZombieJob: --- 10, [1217093]
[2025-12-03 12:29:13] 2025-12-03 11:17:54,402 | INFO     | zombie collector waiting for pid 1217093
[2025-12-03 12:29:13] 2025-12-03 11:17:54,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 12:29:13] 2025-12-03 11:17:54,403 | INFO     | collected zombie processes
[2025-12-03 12:29:13] 2025-12-03 11:17:54,403 | INFO     | will attempt to kill all subprocesses of pid=1217093
[2025-12-03 12:29:13] 2025-12-03 11:17:55,202 | INFO     | process IDs to be killed: [1217093] (in reverse order)
[2025-12-03 12:29:13] 2025-12-03 11:17:55,489 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 12:29:13] 2025-12-03 11:17:55,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 12:29:13] 2025-12-03 11:17:55,527 | INFO     | did not find any defunct processes belonging to 1217093
[2025-12-03 12:29:13] 2025-12-03 11:17:55,561 | INFO     | did not find any defunct processes belonging to 1217093
[2025-12-03 12:29:13] 2025-12-03 11:17:55,563 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 12:29:13] 2025-12-03 11:17:55,563 | INFO     | ready for new job
[2025-12-03 12:29:13] 2025-12-03 11:17:55,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 12:29:13] 2025-12-03 11:17:55,570 | INFO     | ***************************************
[2025-12-03 12:29:13] 2025-12-03 11:17:55,570 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 12:29:13] 2025-12-03 11:17:55,570 | INFO     | ***************************************
[2025-12-03 12:29:13] 2025-12-03 11:17:55,570 | INFO     | 
[2025-12-03 12:29:13] 2025-12-03 11:17:55,579 | INFO     | architecture information:
[2025-12-03 12:29:13] 2025-12-03 11:17:55,580 | INFO     | executing command: cat /etc/os-release
[2025-12-03 12:29:13] 2025-12-03 11:17:55,605 | INFO     | cat /etc/os-release:
[2025-12-03 12:29:13] NAME="CentOS Linux"
[2025-12-03 12:29:13] VERSION="7 (Core)"
[2025-12-03 12:29:13] ID="centos"
[2025-12-03 12:29:13] ID_LIKE="rhel fedora"
[2025-12-03 12:29:13] VERSION_ID="7"
[2025-12-03 12:29:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 12:29:13] ANSI_COLOR="0;31"
[2025-12-03 12:29:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 12:29:13] HOME_URL="https://www.centos.org/"
[2025-12-03 12:29:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 12:29:13] 
[2025-12-03 12:29:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 12:29:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 12:29:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 12:29:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 12:29:13] 
[2025-12-03 12:29:13] 2025-12-03 11:17:55,606 | INFO     | ***************************************
[2025-12-03 12:29:13] 2025-12-03 11:17:56,109 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-12-03 12:29:13] 2025-12-03 11:17:56,136 | INFO     | sufficient remaining disk space (3158826811392 B)
[2025-12-03 12:29:13] 2025-12-03 11:17:56,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 12:29:13] 2025-12-03 11:17:56,137 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 12:29:13] 2025-12-03 11:17:56,137 | INFO     | update_server=False
[2025-12-03 12:29:13] 2025-12-03 11:17:56,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 12:29:13] 2025-12-03 11:17:56,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 12:29:13] 2025-12-03 11:17:56,455 | INFO     | all data control threads have been joined
[2025-12-03 12:29:13] 2025-12-03 11:17:56,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 12:29:13] 2025-12-03 11:17:56,482 | INFO     | aborting loop
[2025-12-03 12:29:13] 2025-12-03 11:17:56,852 | INFO     | all payload control threads have been joined
[2025-12-03 12:29:13] 2025-12-03 11:17:57,142 | INFO     | [job] retrieve thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:57,179 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:57,252 | INFO     | all job control threads have been joined
[2025-12-03 12:29:13] 2025-12-03 11:17:57,460 | INFO     | [data] control thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:57,487 | INFO     | [job] job monitor thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:57,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:57,857 | INFO     | [payload] control thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:58,143 | INFO     | [data] copytool_out thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:58,224 | INFO     | [payload] validate_post thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:58,257 | INFO     | [job] control thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:58,306 | INFO     | [payload] failed_post thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:58,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 12:29:13] 2025-12-03 11:17:58,406 | INFO     | [job] validate thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:58,422 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:58,574 | INFO     | [data] copytool_in thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:58,608 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:17:59,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 12:29:13] 2025-12-03 11:17:59,220 | INFO     | [monitor] cgroup control has ended
[2025-12-03 12:29:13] 2025-12-03 11:17:59,370 | INFO     | [job] queue monitor thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:18:03,032 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 12:29:13] 2025-12-03 11:18:04,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22745579525952)>', '<ExcThread(monitor, started 22745001744128)>']
[2025-12-03 12:29:13] 2025-12-03 11:18:09,402 | INFO     | all workflow threads have been joined
[2025-12-03 12:29:13] 2025-12-03 11:18:09,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 12:29:13] 2025-12-03 11:18:09,402 | INFO     | traces error code: 0
[2025-12-03 12:29:13] 2025-12-03 11:18:09,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 12:29:13] 2025-12-03 11:18:26,819 | INFO     | PID=1209718 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 12:29:13] 2025-12-03 11:18:26,819 | INFO     | .. there are 8 such processes running
[2025-12-03 12:29:13] 2025-12-03 11:18:26,819 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 12:29:13] 2025-12-03 11:18:26,820 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 12:29:13] 2025-12-03 11:18:26,820 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 12:29:13] 2025-12-03 11:18:26,820 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 12:29:13] 2025-12-03 11:18:26,820 | INFO     | [monitor] control thread has ended
[2025-12-03 12:29:13] 2025-12-03 11:18:26,969 [wrapper] ==== pilot stdout END ====
[2025-12-03 12:29:13] 2025-12-03 11:18:26,973 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 12:29:13] 2025-12-03 11:18:26,976 [wrapper] pilotpid: 1209718
[2025-12-03 12:29:13] 2025-12-03 11:18:26,980 [wrapper] Pilot exit status: 0
[2025-12-03 12:29:13] 2025-12-03 11:18:26,996 [wrapper] pandaids: 6900215213
[2025-12-03 12:29:13] 2025-12-03 11:18:27,184 [wrapper] cleanup supervisor_pilot 2618555 1209719
[2025-12-03 12:29:13] 2025-12-03 11:18:27,188 [wrapper] Test setup, not cleaning
[2025-12-03 12:29:13] 2025-12-03 11:18:27,192 [wrapper] apfmon messages muted
[2025-12-03 12:29:13] 2025-12-03 11:18:27,196 [wrapper] ==== wrapper stdout END ====
[2025-12-03 12:29:13] 2025-12-03 11:18:27,199 [wrapper] ==== wrapper stderr END ====
[2025-12-03 12:29:13]  *** Error codes and diagnostics ***
[2025-12-03 12:29:13]     "exeErrorCode": 0,
[2025-12-03 12:29:13]     "exeErrorDiag": "",
[2025-12-03 12:29:13]     "pilotErrorCode": 0,
[2025-12-03 12:29:13]     "pilotErrorDiag": "",
[2025-12-03 12:29:13]  *** Listing of results directory ***
[2025-12-03 12:29:13] total 1309864
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc      5112 Nov 27 17:16 queuedata.json
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc    576529 Nov 27 17:16 pilot3.tar.gz
[2025-12-03 12:29:13] -rwx------ 1 boinc boinc     36292 Nov 27 17:16 runpilot2-wrapper.sh
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc       100 Dec  2 20:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 12:29:13] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 20:27 run_atlas
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc       105 Dec  2 20:27 job.xml
[2025-12-03 12:29:13] -rw-r--r-- 2 boinc boinc 411338969 Dec  2 20:27 EVNT.47483658._004345.pool.root.1
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc      6688 Dec  2 20:27 init_data.xml
[2025-12-03 12:29:13] -rw-r--r-- 2 boinc boinc     15847 Dec  2 20:27 start_atlas.sh
[2025-12-03 12:29:13] drwxrwx--x 2 boinc boinc      4096 Dec  2 20:27 shared
[2025-12-03 12:29:13] -rw-r--r-- 2 boinc boinc    590104 Dec  2 20:27 input.tar.gz
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc         0 Dec  2 20:27 boinc_lockfile
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc      2784 Dec  2 20:27 pandaJob.out
[2025-12-03 12:29:13] -rw------- 1 boinc boinc    989224 Dec  2 20:27 agis_schedconf.cvmfs.json
[2025-12-03 12:29:13] drwx------ 5 boinc boinc      4096 Dec  2 20:27 pilot3
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc       531 Dec  3 12:06 boinc_task_state.xml
[2025-12-03 12:29:13] -rw------- 1 boinc boinc 907047573 Dec  3 12:17 HITS.47556185._001081.pool.root.1
[2025-12-03 12:29:13] -rw------- 1 boinc boinc      1040 Dec  3 12:17 memory_monitor_summary.json
[2025-12-03 12:29:13] -rw------- 1 boinc boinc   1516240 Dec  3 12:17 agis_ddmendpoints.agis.ALL.json
[2025-12-03 12:29:13] -rw------- 1 boinc boinc   1672723 Dec  3 12:17 log.47556185._001081.job.log.tgz.1
[2025-12-03 12:29:13] -rw------- 1 boinc boinc        95 Dec  3 12:17 pilot_heartbeat.json
[2025-12-03 12:29:13] -rw------- 1 boinc boinc      8590 Dec  3 12:17 heartbeat.json
[2025-12-03 12:29:13] -rw------- 1 boinc boinc       822 Dec  3 12:18 pilotlog.txt
[2025-12-03 12:29:13] -rw------- 1 boinc boinc   7826444 Dec  3 12:18 log.47556185._001081.job.log.1
[2025-12-03 12:29:13] -rw------- 1 boinc boinc       353 Dec  3 12:18 output.list
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc       620 Dec  3 12:18 runtime_log
[2025-12-03 12:29:13] -rw------- 1 boinc boinc   9523200 Dec  3 12:18 result.tar.gz
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc      9223 Dec  3 12:18 runtime_log.err
[2025-12-03 12:29:13] -rw------- 1 boinc boinc       671 Dec  3 12:18 JfgLDmOqti8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3tNKDmiJG00n.diag
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc        28 Dec  3 12:28 wrapper_checkpoint.txt
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc      8192 Dec  3 12:29 boinc_mmap_file
[2025-12-03 12:29:13] -rw-r--r-- 1 boinc boinc     21118 Dec  3 12:29 stderr.txt
[2025-12-03 12:29:13] HITS file was successfully produced:
[2025-12-03 12:29:13] -rw------- 1 boinc boinc 907047573 Dec  3 12:17 shared/HITS.pool.root.1
[2025-12-03 12:29:13]  *** Contents of shared directory: ***
[2025-12-03 12:29:13] total 1297396
[2025-12-03 12:29:13] -rw-r--r-- 2 boinc boinc 411338969 Dec  2 20:27 ATLAS.root_0
[2025-12-03 12:29:13] -rw-r--r-- 2 boinc boinc     15847 Dec  2 20:27 start_atlas.sh
[2025-12-03 12:29:13] -rw-r--r-- 2 boinc boinc    590104 Dec  2 20:27 input.tar.gz
[2025-12-03 12:29:13] -rw------- 1 boinc boinc 907047573 Dec  3 12:17 HITS.pool.root.1
[2025-12-03 12:29:13] -rw------- 1 boinc boinc   9523200 Dec  3 12:18 result.tar.gz
12:29:14 (1205163): run_atlas exited; CPU time 227138.730829
12:29:14 (1205163): called boinc_finish(0)

</stderr_txt>
]]>

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