Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:56:32 (11541): wrapper (7.7.26015): starting
03:56:32 (11541): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 03:56:32] Arguments: --nthreads 8
[2025-11-28 03:56:32] Threads: 8
[2025-11-28 03:56:32] Checking for CVMFS
[2025-11-28 03:56:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 03:56:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 03:56:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 03:56:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 03:56:33] 2.11.2.0 7040 120351 141772 153403 0 81 17813645 18432001 1885 130560 0 87171550 99.975 4977127 31339 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 03:56:33] CVMFS is ok
[2025-11-28 03:56:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 03:56:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 03:56:33] Further information can be found at the LHC@home message board.
[2025-11-28 03:56:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 03:56:33] Checking for apptainer binary...
[2025-11-28 03:56:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 03:56:33] Running /usr/bin/apptainer --version
[2025-11-28 03:56:33] apptainer version 1.3.2-1.el7
[2025-11-28 03:56:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 03:56:34] c-206-7.aglt2.org
[2025-11-28 03:56:34] apptainer works
[2025-11-28 03:56:34] Set ATHENA_PROC_NUMBER=8
[2025-11-28 03:56:34] Set ATHENA_CORE_NUMBER=8
[2025-11-28 03:56:34] Starting ATLAS job with PandaID=6898376948
[2025-11-28 03:56:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 23:02:46]  *** The last 200 lines of the pilot log: ***
[2025-11-28 23:02:46] 2025-11-29 04:01:54,880 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-28 23:02:46] 2025-11-29 04:01:54,885 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2489.0
[2025-11-28 23:02:46] 2025-11-29 04:01:54,890 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898376948/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 23:02:46] 2025-11-29 04:01:54,890 | INFO     | extracted standard info from prmon json
[2025-11-28 23:02:46] 2025-11-29 04:01:54,891 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 23:02:46] 2025-11-29 04:01:54,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 23:02:46] 2025-11-29 04:01:54,921 | INFO     | fitting pss+swap vs Time
[2025-11-28 23:02:46] 2025-11-29 04:01:54,923 | INFO     | sum of square deviations: 442684321091.9935
[2025-11-28 23:02:46] 2025-11-29 04:01:54,966 | INFO     | sum of deviations: 2180603278252.0596
[2025-11-28 23:02:46] 2025-11-29 04:01:54,966 | INFO     | mean x: 1764354543.10746
[2025-11-28 23:02:46] 2025-11-29 04:01:54,966 | INFO     | mean y: 2885502.528419183
[2025-11-28 23:02:46] 2025-11-29 04:01:54,967 | INFO     | intersect: -8688087087.620146
[2025-11-28 23:02:46] 2025-11-29 04:01:54,968 | INFO     | chi2: 4.901576344996129
[2025-11-28 23:02:46] 2025-11-29 04:01:54,970 | INFO     | sum of square deviations: 436813470792.64294
[2025-11-28 23:02:46] 2025-11-29 04:01:55,013 | INFO     | sum of deviations: 2507799922385.8535
[2025-11-28 23:02:46] 2025-11-29 04:01:55,013 | INFO     | mean x: 1764354390.6101694
[2025-11-28 23:02:46] 2025-11-29 04:01:55,013 | INFO     | mean y: 2893998.960749331
[2025-11-28 23:02:46] 2025-11-29 04:01:55,013 | INFO     | intersect: -10126481809.446314
[2025-11-28 23:02:46] 2025-11-29 04:01:55,015 | INFO     | chi2: 2.426682864524915
[2025-11-28 23:02:46] 2025-11-29 04:01:55,015 | INFO     | current chi2=2.426682864524915 (change=50.49178685134136 %)
[2025-11-28 23:02:46] 2025-11-29 04:01:55,017 | INFO     | sum of square deviations: 430994761005.7743
[2025-11-28 23:02:46] 2025-11-29 04:01:55,053 | INFO     | sum of deviations: 2553473245606.4824
[2025-11-28 23:02:46] 2025-11-29 04:01:55,053 | INFO     | mean x: 1764354238.112903
[2025-11-28 23:02:46] 2025-11-29 04:01:55,053 | INFO     | mean y: 2895194.2025089604
[2025-11-28 23:02:46] 2025-11-29 04:01:55,053 | INFO     | intersect: -10450204820.93514
[2025-11-28 23:02:46] 2025-11-29 04:01:55,054 | INFO     | chi2: 2.2979124678068708
[2025-11-28 23:02:46] 2025-11-29 04:01:55,054 | INFO     | current chi2=2.2979124678068708 (change=5.30643697207029 %)
[2025-11-28 23:02:46] 2025-11-29 04:01:55,054 | INFO     | right removable region: 1115
[2025-11-28 23:02:46] 2025-11-29 04:01:55,056 | INFO     | sum of square deviations: 436813053552.64325
[2025-11-28 23:02:46] 2025-11-29 04:01:55,078 | INFO     | sum of deviations: 1889734399037.76
[2025-11-28 23:02:46] 2025-11-29 04:01:55,078 | INFO     | mean x: 1764354695.6101694
[2025-11-28 23:02:46] 2025-11-29 04:01:55,078 | INFO     | mean y: 2893048.9330954505
[2025-11-28 23:02:46] 2025-11-29 04:01:55,078 | INFO     | intersect: -7630033058.199625
[2025-11-28 23:02:46] 2025-11-29 04:01:55,079 | INFO     | chi2: 2.903425759360139
[2025-11-28 23:02:46] 2025-11-29 04:01:55,079 | INFO     | current chi2=2.903425759360139 (change=40.76546900418763 %)
[2025-11-28 23:02:46] 2025-11-29 04:01:55,080 | INFO     | sum of square deviations: 430994131791.44324
[2025-11-28 23:02:46] 2025-11-29 04:01:55,109 | INFO     | sum of deviations: 1814689913984.6848
[2025-11-28 23:02:46] 2025-11-29 04:01:55,109 | INFO     | mean x: 1764354848.110215
[2025-11-28 23:02:46] 2025-11-29 04:01:55,109 | INFO     | mean y: 2895015.3521505375
[2025-11-28 23:02:46] 2025-11-29 04:01:55,109 | INFO     | intersect: -7425876541.808883
[2025-11-28 23:02:46] 2025-11-29 04:01:55,110 | INFO     | chi2: 2.8509787450776836
[2025-11-28 23:02:46] 2025-11-29 04:01:55,110 | INFO     | current chi2=2.8509787450776836 (change=1.8063838592523171 %)
[2025-11-28 23:02:46] 2025-11-29 04:01:55,110 | INFO     | left removable region: 20
[2025-11-28 23:02:46] 2025-11-29 04:01:55,111 | INFO     | sum of square deviations: 407119247479.3663
[2025-11-28 23:02:46] 2025-11-29 04:01:55,133 | INFO     | sum of deviations: 2065540257997.5718
[2025-11-28 23:02:46] 2025-11-29 04:01:55,133 | INFO     | mean x: 1764354817.6146119
[2025-11-28 23:02:46] 2025-11-29 04:01:55,133 | INFO     | mean y: 2907961.401826484
[2025-11-28 23:02:46] 2025-11-29 04:01:55,133 | INFO     | intersect: -8948636156.785923
[2025-11-28 23:02:46] 2025-11-29 04:01:55,134 | INFO     | chi2: 0.19431907674905108
[2025-11-28 23:02:46] 2025-11-29 04:01:55,134 | INFO     | current memory leak: 5.07 B/s (using 1095 data points, chi2=0.19)
[2025-11-28 23:02:46] 2025-11-29 04:01:55,135 | INFO     | could have reported an average CPU frequency of 2633 MHz (41 samples)
[2025-11-28 23:02:46] 2025-11-29 04:01:55,135 | INFO     | ..............................
[2025-11-28 23:02:46] 2025-11-29 04:01:55,135 | INFO     | . Timing measurements:
[2025-11-28 23:02:46] 2025-11-29 04:01:55,135 | INFO     | . get job = 0 s
[2025-11-28 23:02:46] 2025-11-29 04:01:55,135 | INFO     | . initial setup = 2 s
[2025-11-28 23:02:46] 2025-11-29 04:01:55,135 | INFO     | . payload setup = 5 s
[2025-11-28 23:02:46] 2025-11-29 04:01:55,136 | INFO     | . stage-in = 0 s
[2025-11-28 23:02:46] 2025-11-29 04:01:55,136 | INFO     | . payload execution = 68675 s
[2025-11-28 23:02:46] 2025-11-29 04:01:55,136 | INFO     | . stage-out = 4 s
[2025-11-28 23:02:46] 2025-11-29 04:01:55,136 | INFO     | . log creation = 0 s
[2025-11-28 23:02:46] 2025-11-29 04:01:55,136 | INFO     | ..............................
[2025-11-28 23:02:46] 2025-11-29 04:01:55,211 | INFO     | 
[2025-11-28 23:02:46] 2025-11-29 04:01:55,211 | INFO     | job summary report
[2025-11-28 23:02:46] 2025-11-29 04:01:55,211 | INFO     | --------------------------------------------------
[2025-11-28 23:02:46] 2025-11-29 04:01:55,211 | INFO     | PanDA job id: 6898376948
[2025-11-28 23:02:46] 2025-11-29 04:01:55,211 | INFO     | task id: 47556161
[2025-11-28 23:02:46] 2025-11-29 04:01:55,211 | INFO     | errors: (none)
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | pilot state: finished 
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | transexitcode: 0
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | exeerrorcode: 0
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | exeerrordiag: 
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | exitcode: 0
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | exitmsg: OK
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | cpuconsumptiontime: 531697 s
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | nevents: 1000
[2025-11-28 23:02:46] 2025-11-29 04:01:55,212 | INFO     | neventsw: 0
[2025-11-28 23:02:46] 2025-11-29 04:01:55,213 | INFO     | pid: 21763
[2025-11-28 23:02:46] 2025-11-29 04:01:55,213 | INFO     | pgrp: 21763
[2025-11-28 23:02:46] 2025-11-29 04:01:55,213 | INFO     | corecount: 8
[2025-11-28 23:02:46] 2025-11-29 04:01:55,213 | INFO     | event service: False
[2025-11-28 23:02:46] 2025-11-29 04:01:55,213 | INFO     | sizes: {0: 2284315, 4: 2284577, 11: 2284605, 68684: 2340582, 68689: 2349576, 68690: 2349632, 68695: 2350102}
[2025-11-28 23:02:46] 2025-11-29 04:01:55,213 | INFO     | --------------------------------------------------
[2025-11-28 23:02:46] 2025-11-29 04:01:55,213 | INFO     | 
[2025-11-28 23:02:46] 2025-11-29 04:01:55,213 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 23:02:46] 2025-11-29 04:01:55,230 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,230 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,231 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,231 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,231 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,231 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,231 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,231 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,232 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,232 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,232 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,232 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,232 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,232 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,233 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,233 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,233 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,233 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 23:02:46] 2025-11-29 04:01:55,233 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,233 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 23:02:46] 2025-11-29 04:01:55,234 | INFO     | job 6898376948 has completed (purged errors)
[2025-11-28 23:02:46] 2025-11-29 04:01:55,234 | INFO     | overall cleanup function is called
[2025-11-28 23:02:46] 2025-11-29 04:01:56,250 | INFO     | --- collectZombieJob: --- 10, [21763]
[2025-11-28 23:02:46] 2025-11-29 04:01:56,250 | INFO     | zombie collector waiting for pid 21763
[2025-11-28 23:02:46] 2025-11-29 04:01:56,250 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 23:02:46] 2025-11-29 04:01:56,250 | INFO     | collected zombie processes
[2025-11-28 23:02:46] 2025-11-29 04:01:56,250 | INFO     | will attempt to kill all subprocesses of pid=21763
[2025-11-28 23:02:46] 2025-11-29 04:01:56,406 | INFO     | process IDs to be killed: [21763] (in reverse order)
[2025-11-28 23:02:46] 2025-11-29 04:01:56,467 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 23:02:46] 2025-11-29 04:01:56,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 23:02:46] 2025-11-29 04:01:56,473 | INFO     | did not find any defunct processes belonging to 21763
[2025-11-28 23:02:46] 2025-11-29 04:01:56,478 | INFO     | did not find any defunct processes belonging to 21763
[2025-11-28 23:02:46] 2025-11-29 04:01:56,480 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 23:02:46] 2025-11-29 04:01:56,481 | INFO     | ready for new job
[2025-11-28 23:02:46] 2025-11-29 04:01:56,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 23:02:46] 2025-11-29 04:01:56,486 | INFO     | ***************************************
[2025-11-28 23:02:46] 2025-11-29 04:01:56,486 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 23:02:46] 2025-11-29 04:01:56,486 | INFO     | ***************************************
[2025-11-28 23:02:46] 2025-11-29 04:01:56,486 | INFO     | 
[2025-11-28 23:02:46] 2025-11-29 04:01:56,487 | INFO     | architecture information:
[2025-11-28 23:02:46] 2025-11-29 04:01:56,488 | INFO     | executing command: cat /etc/os-release
[2025-11-28 23:02:46] 2025-11-29 04:01:56,505 | INFO     | cat /etc/os-release:
[2025-11-28 23:02:46] NAME="CentOS Linux"
[2025-11-28 23:02:46] VERSION="7 (Core)"
[2025-11-28 23:02:46] ID="centos"
[2025-11-28 23:02:46] ID_LIKE="rhel fedora"
[2025-11-28 23:02:46] VERSION_ID="7"
[2025-11-28 23:02:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 23:02:46] ANSI_COLOR="0;31"
[2025-11-28 23:02:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 23:02:46] HOME_URL="https://www.centos.org/"
[2025-11-28 23:02:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 23:02:46] 
[2025-11-28 23:02:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 23:02:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 23:02:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 23:02:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 23:02:46] 
[2025-11-28 23:02:46] 2025-11-29 04:01:56,505 | INFO     | ***************************************
[2025-11-28 23:02:46] 2025-11-29 04:01:57,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 23:02:46] 2025-11-29 04:01:57,025 | INFO     | sufficient remaining disk space (24913117184 B)
[2025-11-28 23:02:46] 2025-11-29 04:01:57,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 23:02:46] 2025-11-29 04:01:57,025 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 23:02:46] 2025-11-29 04:01:57,026 | INFO     | update_server=False
[2025-11-28 23:02:46] 2025-11-29 04:01:57,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 23:02:46] 2025-11-29 04:01:57,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 23:02:46] 2025-11-29 04:01:57,026 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 23:02:46] 2025-11-29 04:01:57,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 23:02:46] 2025-11-29 04:01:57,097 | INFO     | all data control threads have been joined
[2025-11-28 23:02:46] 2025-11-29 04:01:57,118 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 23:02:46] 2025-11-29 04:01:57,119 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 23:02:46] 2025-11-29 04:01:57,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 23:02:46] 2025-11-29 04:01:57,119 | INFO     | will abort loop
[2025-11-28 23:02:46] 2025-11-29 04:01:57,496 | INFO     | all payload control threads have been joined
[2025-11-28 23:02:46] 2025-11-29 04:01:57,602 | INFO     | all job control threads have been joined
[2025-11-28 23:02:46] 2025-11-29 04:01:58,031 | INFO     | [job] retrieve thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,031 | INFO     | [job] queue monitor thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,103 | INFO     | [data] control thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,118 | INFO     | [payload] validate_post thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,124 | INFO     | [job] job monitor thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,441 | INFO     | [payload] failed_post thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,503 | INFO     | [payload] control thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,607 | INFO     | [job] control thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,757 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,834 | INFO     | [data] copytool_in thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:58,835 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:59,066 | INFO     | [data] copytool_out thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:59,243 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:01:59,249 | INFO     | [job] validate thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:02:01,032 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:02:07,924 | INFO     | job.realtimelogging is not enabled
[2025-11-28 23:02:46] 2025-11-29 04:02:08,929 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 23:02:46] 2025-11-29 04:02:27,102 | INFO     | PID=15297 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 23:02:46] 2025-11-29 04:02:27,102 | INFO     | .. there are 3 such processes running
[2025-11-28 23:02:46] 2025-11-29 04:02:27,102 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 23:02:46] 2025-11-29 04:02:27,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 23:02:46] 2025-11-29 04:02:27,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 23:02:46] 2025-11-29 04:02:39,310 | INFO     | [monitor] cgroup control has ended
[2025-11-28 23:02:46] 2025-11-29 04:02:41,215 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139681836844864)>', '<ExcThread(monitor, started 139681119332096)>']
[2025-11-28 23:02:46] 2025-11-29 04:02:42,174 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 23:02:46] 2025-11-29 04:02:42,175 | INFO     | [monitor] control thread has ended
[2025-11-28 23:02:46] 2025-11-29 04:02:46,240 | INFO     | all workflow threads have been joined
[2025-11-28 23:02:46] 2025-11-29 04:02:46,240 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 23:02:46] 2025-11-29 04:02:46,240 | INFO     | traces error code: 0
[2025-11-28 23:02:46] 2025-11-29 04:02:46,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 23:02:46] 2025-11-29 04:02:46,360 [wrapper] ==== pilot stdout END ====
[2025-11-28 23:02:46] 2025-11-29 04:02:46,362 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 23:02:46] 2025-11-29 04:02:46,364 [wrapper] pilotpid: 15297
[2025-11-28 23:02:46] 2025-11-29 04:02:46,367 [wrapper] Pilot exit status: 0
[2025-11-28 23:02:46] 2025-11-29 04:02:46,376 [wrapper] pandaids: 6898376948
[2025-11-28 23:02:46] 2025-11-29 04:02:46,417 [wrapper] cleanup supervisor_pilot 19431 15298
[2025-11-28 23:02:46] 2025-11-29 04:02:46,420 [wrapper] Test setup, not cleaning
[2025-11-28 23:02:46] 2025-11-29 04:02:46,422 [wrapper] apfmon messages muted
[2025-11-28 23:02:46] 2025-11-29 04:02:46,425 [wrapper] ==== wrapper stdout END ====
[2025-11-28 23:02:46] 2025-11-29 04:02:46,427 [wrapper] ==== wrapper stderr END ====
[2025-11-28 23:02:46]  *** Error codes and diagnostics ***
[2025-11-28 23:02:46]     "exeErrorCode": 0,
[2025-11-28 23:02:46]     "exeErrorDiag": "",
[2025-11-28 23:02:46]     "pilotErrorCode": 0,
[2025-11-28 23:02:46]     "pilotErrorDiag": "",
[2025-11-28 23:02:46]  *** Listing of results directory ***
[2025-11-28 23:02:46] total 1322876
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 10:45 pilot3.tar.gz
[2025-11-28 23:02:46] -rwx------ 1 boincer umatlas     36292 Nov 26 10:54 runpilot2-wrapper.sh
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 10:54 queuedata.json
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas       100 Nov 28 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 23:02:46] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 03:56 run_atlas
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas       105 Nov 28 03:56 job.xml
[2025-11-28 23:02:46] -rw-r--r-- 2 boincer umatlas 409066968 Nov 28 03:56 EVNT.47483658._002560.pool.root.1
[2025-11-28 23:02:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 03:56 start_atlas.sh
[2025-11-28 23:02:46] drwxrwx--x 2 boincer umatlas      4096 Nov 28 03:56 shared
[2025-11-28 23:02:46] -rw-r--r-- 2 boincer umatlas    590102 Nov 28 03:56 input.tar.gz
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas         0 Nov 28 03:56 boinc_lockfile
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas      2786 Nov 28 03:56 pandaJob.out
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas        57 Nov 28 03:56 setup.sh.local
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas    991858 Nov 28 03:56 agis_schedconf.cvmfs.json
[2025-11-28 23:02:46] drwx------ 5 boincer umatlas      4096 Nov 28 03:56 pilot3
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas       533 Nov 28 22:51 boinc_task_state.xml
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas      5952 Nov 28 22:55 init_data.xml
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas 918060395 Nov 28 23:01 HITS.47556161._005426.pool.root.1
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas        95 Nov 28 23:01 pilot_heartbeat.json
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas      1067 Nov 28 23:01 memory_monitor_summary.json
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas   1516240 Nov 28 23:01 agis_ddmendpoints.agis.ALL.json
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas   2291663 Nov 28 23:01 log.47556161._005426.job.log.tgz.1
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas      8672 Nov 28 23:01 heartbeat.json
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 23:02 boinc_mmap_file
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas        29 Nov 28 23:02 wrapper_checkpoint.txt
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas      5079 Nov 28 23:02 pilotlog.txt
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas   9499931 Nov 28 23:02 log.47556161._005426.job.log.1
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas       353 Nov 28 23:02 output.list
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas       620 Nov 28 23:02 runtime_log
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas  11806720 Nov 28 23:02 result.tar.gz
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas      9338 Nov 28 23:02 runtime_log.err
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas       667 Nov 28 23:02 jjOKDm11Wi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmt0JKDmZYkcKm.diag
[2025-11-28 23:02:46] -rw-r--r-- 1 boincer umatlas     21227 Nov 28 23:02 stderr.txt
[2025-11-28 23:02:46] HITS file was successfully produced:
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas 918060395 Nov 28 23:01 shared/HITS.pool.root.1
[2025-11-28 23:02:46]  *** Contents of shared directory: ***
[2025-11-28 23:02:46] total 1308156
[2025-11-28 23:02:46] -rw-r--r-- 2 boincer umatlas 409066968 Nov 28 03:56 ATLAS.root_0
[2025-11-28 23:02:46] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 03:56 start_atlas.sh
[2025-11-28 23:02:46] -rw-r--r-- 2 boincer umatlas    590102 Nov 28 03:56 input.tar.gz
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas 918060395 Nov 28 23:01 HITS.pool.root.1
[2025-11-28 23:02:46] -rw------- 1 boincer umatlas  11806720 Nov 28 23:02 result.tar.gz
23:02:48 (11541): run_atlas exited; CPU time 530579.914219
23:02:48 (11541): called boinc_finish(0)

</stderr_txt>
]]>

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