Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
00:15:18 (3189529): wrapper (7.7.26015): starting
00:15:18 (3189529): wrapper: running run_atlas (--nthreads 4)
[2025-11-28 07:54:20] Arguments: --nthreads 4
[2025-11-28 07:54:20] Threads: 4
[2025-11-28 07:54:20] Checking for CVMFS
[2025-11-28 07:54:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 07:54:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 07:54:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 07:54:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 07:54:20] 2.13.2.0 213864 6637 62576 153400 0 90 3669172 4096001 5106 130560 0 19684098 99.962 703763 755 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-28 07:54:20] CVMFS is ok
[2025-11-28 07:54:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 07:54:20] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-28 07:54:20] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-28 07:54:20] Further information can be found at the LHC@home message board.
[2025-11-28 07:54:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 07:54:20] Checking for apptainer binary...
[2025-11-28 07:54:20] apptainer is not installed, using version from CVMFS
[2025-11-28 07:54:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 07:54:20] X670EPG
[2025-11-28 07:54:20] apptainer works
[2025-11-28 07:54:20] Set ATHENA_PROC_NUMBER=4
[2025-11-28 07:54:20] Set ATHENA_CORE_NUMBER=4
[2025-11-28 07:54:20] Starting ATLAS job with PandaID=6893848391
[2025-11-28 07:54:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 07:54:20]  *** The last 200 lines of the pilot log: ***
[2025-11-28 07:54:20] 2025-11-28 14:53:43,430 | INFO     | time since job start (27496s) is within the limit (172800.0s)
[2025-11-28 07:54:20] 2025-11-28 14:53:43,686 | INFO     | monitor loop #2055: job 0:6893848391 is in state 'finished'
[2025-11-28 07:54:20] 2025-11-28 14:53:43,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,074 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 07:54:20] 2025-11-28 14:53:45,077 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4640.86528125
[2025-11-28 07:54:20] 2025-11-28 14:53:45,080 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6893848391/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,081 | INFO     | extracted standard info from prmon json
[2025-11-28 07:54:20] 2025-11-28 14:53:45,081 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 07:54:20] 2025-11-28 14:53:45,081 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 07:54:20] 2025-11-28 14:53:45,084 | INFO     | fitting pss+swap vs Time
[2025-11-28 07:54:20] 2025-11-28 14:53:45,084 | INFO     | sum of square deviations: 28444998450.0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,087 | INFO     | sum of deviations: 201746740332.0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,087 | INFO     | mean x: 1764327872.0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,087 | INFO     | mean y: 2248199.1263858094
[2025-11-28 07:54:20] 2025-11-28 14:53:45,087 | INFO     | intersect: -12511283755.483164
[2025-11-28 07:54:20] 2025-11-28 14:53:45,087 | INFO     | chi2: 3.094705572821447
[2025-11-28 07:54:20] 2025-11-28 14:53:45,087 | INFO     | sum of square deviations: 27509380907.5
[2025-11-28 07:54:20] 2025-11-28 14:53:45,090 | INFO     | sum of deviations: 255974755853.00006
[2025-11-28 07:54:20] 2025-11-28 14:53:45,090 | INFO     | mean x: 1764327719.5
[2025-11-28 07:54:20] 2025-11-28 14:53:45,090 | INFO     | mean y: 2256979.7040358745
[2025-11-28 07:54:20] 2025-11-28 14:53:45,090 | INFO     | intersect: -16414810302.263216
[2025-11-28 07:54:20] 2025-11-28 14:53:45,090 | INFO     | chi2: 1.6954854348579895
[2025-11-28 07:54:20] 2025-11-28 14:53:45,090 | INFO     | current chi2=1.6954854348579895 (change=45.21335245109559 %)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,091 | INFO     | sum of square deviations: 26594507940.0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,093 | INFO     | sum of deviations: 251111374449.0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,093 | INFO     | mean x: 1764327567.0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,093 | INFO     | mean y: 2256169.009070295
[2025-11-28 07:54:20] 2025-11-28 14:53:45,093 | INFO     | intersect: -16656924791.480255
[2025-11-28 07:54:20] 2025-11-28 14:53:45,093 | INFO     | chi2: 1.694158611374692
[2025-11-28 07:54:20] 2025-11-28 14:53:45,093 | INFO     | current chi2=1.694158611374692 (change=0.07825625959497684 %)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,093 | INFO     | right removable region: 440
[2025-11-28 07:54:20] 2025-11-28 14:53:45,093 | INFO     | sum of square deviations: 27509380907.5
[2025-11-28 07:54:20] 2025-11-28 14:53:45,096 | INFO     | sum of deviations: 128486242026.5
[2025-11-28 07:54:20] 2025-11-28 14:53:45,096 | INFO     | mean x: 1764328024.5
[2025-11-28 07:54:20] 2025-11-28 14:53:45,096 | INFO     | mean y: 2260089.2892376683
[2025-11-28 07:54:20] 2025-11-28 14:53:45,096 | INFO     | intersect: -8238269871.464609
[2025-11-28 07:54:20] 2025-11-28 14:53:45,096 | INFO     | chi2: 1.4702534349484033
[2025-11-28 07:54:20] 2025-11-28 14:53:45,096 | INFO     | current chi2=1.4702534349484033 (change=52.49133074691912 %)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,097 | INFO     | sum of square deviations: 26594507940.0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,099 | INFO     | sum of deviations: 115331307125.99994
[2025-11-28 07:54:20] 2025-11-28 14:53:45,099 | INFO     | mean x: 1764328177.0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,099 | INFO     | mean y: 2262281.034013605
[2025-11-28 07:54:20] 2025-11-28 14:53:45,099 | INFO     | intersect: -7649027049.519495
[2025-11-28 07:54:20] 2025-11-28 14:53:45,099 | INFO     | chi2: 1.4554053573729613
[2025-11-28 07:54:20] 2025-11-28 14:53:45,099 | INFO     | current chi2=1.4554053573729613 (change=1.00989919305736 %)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,099 | INFO     | left removable region: 20
[2025-11-28 07:54:20] 2025-11-28 14:53:45,099 | INFO     | sum of square deviations: 22973323765.0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,101 | INFO     | sum of deviations: 144300448777.5
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | mean x: 1764328146.5
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | mean y: 2274343.530952381
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | intersect: -11079854909.293982
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | chi2: 0.030415997948728495
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | current memory leak: 6.28 B/s (using 420 data points, chi2=0.03)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | could have reported an average CPU frequency of 4614 MHz (19 samples)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | ..............................
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | . Timing measurements:
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | . get job = 0 s
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | . initial setup = 3 s
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | . payload setup = 3 s
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | . stage-in = 0 s
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | . payload execution = 27463 s
[2025-11-28 07:54:20] 2025-11-28 14:53:45,102 | INFO     | . stage-out = 7 s
[2025-11-28 07:54:20] 2025-11-28 14:53:45,103 | INFO     | . log creation = 0 s
[2025-11-28 07:54:20] 2025-11-28 14:53:45,103 | INFO     | ..............................
[2025-11-28 07:54:20] 2025-11-28 14:53:45,434 | INFO     | time since job start (27498s) is within the limit (172800.0s)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,579 | INFO     | 
[2025-11-28 07:54:20] 2025-11-28 14:53:45,579 | INFO     | job summary report
[2025-11-28 07:54:20] 2025-11-28 14:53:45,579 | INFO     | --------------------------------------------------
[2025-11-28 07:54:20] 2025-11-28 14:53:45,579 | INFO     | PanDA job id: 6893848391
[2025-11-28 07:54:20] 2025-11-28 14:53:45,579 | INFO     | task id: 47523449
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | errors: (none)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | pilot state: finished 
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | transexitcode: 0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | exeerrorcode: 0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | exeerrordiag: 
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | exitcode: 0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | exitmsg: OK
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | cpuconsumptiontime: 107660 s
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | nevents: 1000
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | neventsw: 0
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | pid: 3205992
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | pgrp: 3205992
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | corecount: 4
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | event service: False
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | sizes: {0: 2284271, 2: 2284533, 11: 2284561, 27469: 2322440, 27478: 2331448, 27481: 2331504, 27484: 2331878}
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | --------------------------------------------------
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | 
[2025-11-28 07:54:20] 2025-11-28 14:53:45,580 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-28 07:54:20] 2025-11-28 14:53:45,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | job 6893848391 has completed (purged errors)
[2025-11-28 07:54:20] 2025-11-28 14:53:45,593 | INFO     | overall cleanup function is called
[2025-11-28 07:54:20] 2025-11-28 14:53:46,603 | INFO     | --- collectZombieJob: --- 10, [3205992]
[2025-11-28 07:54:20] 2025-11-28 14:53:46,603 | INFO     | zombie collector waiting for pid 3205992
[2025-11-28 07:54:20] 2025-11-28 14:53:46,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 07:54:20] 2025-11-28 14:53:46,603 | INFO     | collected zombie processes
[2025-11-28 07:54:20] 2025-11-28 14:53:46,603 | INFO     | will attempt to kill all subprocesses of pid=3205992
[2025-11-28 07:54:20] 2025-11-28 14:53:46,690 | INFO     | process IDs to be killed: [3205992] (in reverse order)
[2025-11-28 07:54:20] 2025-11-28 14:53:46,737 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 07:54:20] 2025-11-28 14:53:46,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 07:54:20] 2025-11-28 14:53:46,740 | INFO     | did not find any defunct processes belonging to 3205992
[2025-11-28 07:54:20] 2025-11-28 14:53:46,743 | INFO     | did not find any defunct processes belonging to 3205992
[2025-11-28 07:54:20] 2025-11-28 14:53:46,743 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 07:54:20] 2025-11-28 14:53:46,743 | INFO     | ready for new job
[2025-11-28 07:54:20] 2025-11-28 14:53:46,743 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 07:54:20] 2025-11-28 14:53:46,745 | INFO     | ***************************************
[2025-11-28 07:54:20] 2025-11-28 14:53:46,745 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 07:54:20] 2025-11-28 14:53:46,745 | INFO     | ***************************************
[2025-11-28 07:54:20] 2025-11-28 14:53:46,745 | INFO     | 
[2025-11-28 07:54:20] 2025-11-28 14:53:46,746 | INFO     | architecture information:
[2025-11-28 07:54:20] 2025-11-28 14:53:46,746 | INFO     | executing command: cat /etc/os-release
[2025-11-28 07:54:20] 2025-11-28 14:53:46,756 | INFO     | cat /etc/os-release:
[2025-11-28 07:54:20] NAME="CentOS Linux"
[2025-11-28 07:54:20] VERSION="7 (Core)"
[2025-11-28 07:54:20] ID="centos"
[2025-11-28 07:54:20] ID_LIKE="rhel fedora"
[2025-11-28 07:54:20] VERSION_ID="7"
[2025-11-28 07:54:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 07:54:20] ANSI_COLOR="0;31"
[2025-11-28 07:54:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 07:54:20] HOME_URL="https://www.centos.org/"
[2025-11-28 07:54:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 07:54:20] 
[2025-11-28 07:54:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 07:54:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 07:54:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 07:54:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 07:54:20] 
[2025-11-28 07:54:20] 2025-11-28 14:53:46,756 | INFO     | ***************************************
[2025-11-28 07:54:20] 2025-11-28 14:53:47,258 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-28 07:54:20] 2025-11-28 14:53:47,272 | INFO     | sufficient remaining disk space (425427206144 B)
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | INFO     | update_server=False
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | INFO     | aborting loop
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 07:54:20] 2025-11-28 14:53:47,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 07:54:20] 2025-11-28 14:53:47,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 07:54:20] 2025-11-28 14:53:47,356 | INFO     | all job control threads have been joined
[2025-11-28 07:54:20] 2025-11-28 14:53:47,945 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 07:54:20] 2025-11-28 14:53:47,961 | INFO     | all data control threads have been joined
[2025-11-28 07:54:20] 2025-11-28 14:53:48,277 | INFO     | [job] retrieve thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:48,278 | INFO     | [job] job monitor thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:48,361 | INFO     | [job] control thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:48,375 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:48,513 | INFO     | all payload control threads have been joined
[2025-11-28 07:54:20] 2025-11-28 14:53:48,967 | INFO     | [data] control thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:49,028 | INFO     | [payload] validate_post thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:49,125 | INFO     | [payload] failed_post thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:49,312 | INFO     | [data] copytool_in thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:49,339 | INFO     | [data] copytool_out thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:49,383 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:49,399 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:49,426 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:49,516 | INFO     | [payload] control thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:49,705 | INFO     | [job] validate thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:50,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:54:20] 2025-11-28 14:53:51,165 | INFO     | [job] queue monitor thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:53:51,951 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 07:54:20] 2025-11-28 14:54:12,833 | INFO     | [monitor] cgroup control has ended
[2025-11-28 07:54:20] 2025-11-28 14:54:14,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138643199219520)>', '<ExcThread(monitor, started 138642796316416)>']
[2025-11-28 07:54:20] 2025-11-28 14:54:14,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 07:54:20] 2025-11-28 14:54:14,408 | INFO     | [monitor] control thread has ended
[2025-11-28 07:54:20] 2025-11-28 14:54:19,263 | INFO     | all workflow threads have been joined
[2025-11-28 07:54:20] 2025-11-28 14:54:19,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 07:54:20] 2025-11-28 14:54:19,264 | INFO     | traces error code: 0
[2025-11-28 07:54:20] 2025-11-28 14:54:19,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 07:54:20] 2025-11-28 14:54:19,319 [wrapper] ==== pilot stdout END ====
[2025-11-28 07:54:20] 2025-11-28 14:54:19,320 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 07:54:20] 2025-11-28 14:54:19,322 [wrapper] pilotpid: 3193378
[2025-11-28 07:54:20] 2025-11-28 14:54:19,323 [wrapper] Pilot exit status: 0
[2025-11-28 07:54:20] 2025-11-28 14:54:19,329 [wrapper] pandaids: 6893848391
[2025-11-28 07:54:20] 2025-11-28 14:54:19,355 [wrapper] cleanup supervisor_pilot 3770083 3193379
[2025-11-28 07:54:20] 2025-11-28 14:54:19,357 [wrapper] Test setup, not cleaning
[2025-11-28 07:54:20] 2025-11-28 14:54:19,358 [wrapper] apfmon messages muted
[2025-11-28 07:54:20] 2025-11-28 14:54:19,360 [wrapper] ==== wrapper stdout END ====
[2025-11-28 07:54:20] 2025-11-28 14:54:19,361 [wrapper] ==== wrapper stderr END ====
[2025-11-28 07:54:20]  *** Error codes and diagnostics ***
[2025-11-28 07:54:20]     "exeErrorCode": 0,
[2025-11-28 07:54:20]     "exeErrorDiag": "",
[2025-11-28 07:54:20]     "pilotErrorCode": 0,
[2025-11-28 07:54:20]     "pilotErrorDiag": "",
[2025-11-28 07:54:20]  *** Listing of results directory ***
[2025-11-28 07:54:20] total 1317792
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc    576529 Nov 20 03:06 pilot3.tar.gz
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc      5112 Nov 20 03:32 queuedata.json
[2025-11-28 07:54:20] -rwx------ 1 boinc boinc     36292 Nov 20 03:33 runpilot2-wrapper.sh
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc       100 Nov 28 00:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 07:54:20] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 00:15 run_atlas
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc       105 Nov 28 00:15 job.xml
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc      9986 Nov 28 00:15 init_data.xml
[2025-11-28 07:54:20] -rw-r--r-- 2 boinc boinc 413856517 Nov 28 00:15 EVNT.47493127._000267.pool.root.1
[2025-11-28 07:54:20] -rw-r--r-- 2 boinc boinc     15847 Nov 28 00:15 start_atlas.sh
[2025-11-28 07:54:20] drwxrwx--x 2 boinc boinc      4096 Nov 28 00:15 shared
[2025-11-28 07:54:20] -rw-r--r-- 2 boinc boinc    590100 Nov 28 00:15 input.tar.gz
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc       112 Nov 28 00:15 stderr.txt
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc         0 Nov 28 00:15 boinc_lockfile
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc      2785 Nov 28 00:15 pandaJob.out
[2025-11-28 07:54:20] -rw------- 1 boinc boinc    991866 Nov 28 00:15 agis_schedconf.cvmfs.json
[2025-11-28 07:54:20] drwx------ 5 boinc boinc      4096 Nov 28 00:15 pilot3
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc       532 Nov 28 07:51 boinc_task_state.xml
[2025-11-28 07:54:20] -rw------- 1 boinc boinc 921182477 Nov 28 07:53 HITS.47523449._002670.pool.root.1
[2025-11-28 07:54:20] -rw------- 1 boinc boinc      1043 Nov 28 07:53 memory_monitor_summary.json
[2025-11-28 07:54:20] -rw------- 1 boinc boinc        95 Nov 28 07:53 pilot_heartbeat.json
[2025-11-28 07:54:20] -rw------- 1 boinc boinc   1516240 Nov 28 07:53 agis_ddmendpoints.agis.ALL.json
[2025-11-28 07:54:20] -rw------- 1 boinc boinc   1278072 Nov 28 07:53 log.47523449._002670.job.log.tgz.1
[2025-11-28 07:54:20] -rw------- 1 boinc boinc      8544 Nov 28 07:53 heartbeat.json
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc        29 Nov 28 07:54 wrapper_checkpoint.txt
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc      8192 Nov 28 07:54 boinc_mmap_file
[2025-11-28 07:54:20] -rw------- 1 boinc boinc      4560 Nov 28 07:54 pilotlog.txt
[2025-11-28 07:54:20] -rw------- 1 boinc boinc   3957744 Nov 28 07:54 log.47523449._002670.job.log.1
[2025-11-28 07:54:20] -rw------- 1 boinc boinc       353 Nov 28 07:54 output.list
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc       620 Nov 28 07:54 runtime_log
[2025-11-28 07:54:20] -rw------- 1 boinc boinc   5253120 Nov 28 07:54 result.tar.gz
[2025-11-28 07:54:20] -rw------- 1 boinc boinc       661 Nov 28 07:54 tRwKDmj9Gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwVHKDm5uso7m.diag
[2025-11-28 07:54:20] -rw-r--r-- 1 boinc boinc      8920 Nov 28 07:54 runtime_log.err
[2025-11-28 07:54:20] HITS file was successfully produced:
[2025-11-28 07:54:20] -rw------- 1 boinc boinc 921182477 Nov 28 07:53 shared/HITS.pool.root.1
[2025-11-28 07:54:20]  *** Contents of shared directory: ***
[2025-11-28 07:54:20] total 1309492
[2025-11-28 07:54:20] -rw-r--r-- 2 boinc boinc 413856517 Nov 28 00:15 ATLAS.root_0
[2025-11-28 07:54:20] -rw-r--r-- 2 boinc boinc     15847 Nov 28 00:15 start_atlas.sh
[2025-11-28 07:54:20] -rw-r--r-- 2 boinc boinc    590100 Nov 28 00:15 input.tar.gz
[2025-11-28 07:54:20] -rw------- 1 boinc boinc 921182477 Nov 28 07:53 HITS.pool.root.1
[2025-11-28 07:54:20] -rw------- 1 boinc boinc   5253120 Nov 28 07:54 result.tar.gz
07:54:21 (3189529): run_atlas exited; CPU time 107655.937552
07:54:21 (3189529): called boinc_finish(0)

</stderr_txt>
]]>

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