Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:18:13 (3498092): wrapper (7.7.26015): starting
00:18:13 (3498092): wrapper: running run_atlas (--nthreads 4)
[2025-12-01 00:18:13] Arguments: --nthreads 4
[2025-12-01 00:18:13] Threads: 4
[2025-12-01 00:18:13] Checking for CVMFS
[2025-12-01 00:18:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 00:18:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 00:18:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 00:18:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 00:18:14] 2.9.2.0 844198 17737 101348 153498 1 71 35849787 36864001 0 130560 1 6990065 99.953 810776 1305 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-01 00:18:14] CVMFS is ok
[2025-12-01 00:18:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 00:18:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 00:18:14] Further information can be found at the LHC@home message board.
[2025-12-01 00:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 00:18:14] Checking for apptainer binary...
[2025-12-01 00:18:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 00:18:14] Running /usr/bin/apptainer --version
[2025-12-01 00:18:14] apptainer version 1.4.1-1.1
[2025-12-01 00:18:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 00:18:14] thA309
[2025-12-01 00:18:14] apptainer works
[2025-12-01 00:18:14] Set ATHENA_PROC_NUMBER=4
[2025-12-01 00:18:14] Set ATHENA_CORE_NUMBER=4
[2025-12-01 00:18:14] Starting ATLAS job with PandaID=6898988807
[2025-12-01 00:18:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 07:21:01]  *** The last 200 lines of the pilot log: ***
[2025-12-01 07:21:01] 2025-12-01 06:20:00,179 | INFO     | cat /etc/os-release:
[2025-12-01 07:21:01] NAME="CentOS Linux"
[2025-12-01 07:21:01] VERSION="7 (Core)"
[2025-12-01 07:21:01] ID="centos"
[2025-12-01 07:21:01] ID_LIKE="rhel fedora"
[2025-12-01 07:21:01] VERSION_ID="7"
[2025-12-01 07:21:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 07:21:01] ANSI_COLOR="0;31"
[2025-12-01 07:21:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 07:21:01] HOME_URL="https://www.centos.org/"
[2025-12-01 07:21:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 07:21:01] 
[2025-12-01 07:21:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 07:21:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 07:21:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 07:21:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 07:21:01] 
[2025-12-01 07:21:01] 2025-12-01 06:20:00,180 | INFO     | ***************************************
[2025-12-01 07:21:01] 2025-12-01 06:20:00,683 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-01 07:21:01] 2025-12-01 06:20:00,702 | INFO     | sufficient remaining disk space (220198862848 B)
[2025-12-01 07:21:01] 2025-12-01 06:20:00,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 07:21:01] 2025-12-01 06:20:00,702 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 07:21:01] 2025-12-01 06:20:00,702 | INFO     | update_server=False
[2025-12-01 07:21:01] 2025-12-01 06:20:00,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 07:21:01] 2025-12-01 06:20:00,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 07:21:01] 2025-12-01 06:20:00,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 07:21:01] 2025-12-01 06:20:00,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 07:21:01] 2025-12-01 06:20:00,763 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 07:21:01] 2025-12-01 06:20:00,764 | INFO     | aborting loop
[2025-12-01 07:21:01] 2025-12-01 06:20:00,830 | INFO     | all data control threads have been joined
[2025-12-01 07:21:01] 2025-12-01 06:20:01,062 | INFO     | all payload control threads have been joined
[2025-12-01 07:21:01] 2025-12-01 06:20:01,708 | INFO     | [job] queue monitor thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:01,708 | INFO     | [job] retrieve thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:01,769 | INFO     | [job] job monitor thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:01,835 | INFO     | [data] control thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:02,068 | INFO     | [payload] control thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:02,227 | INFO     | [payload] failed_post thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:02,329 | INFO     | [data] copytool_in thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:02,347 | INFO     | all job control threads have been joined
[2025-12-01 07:21:01] 2025-12-01 06:20:02,708 | INFO     | [data] copytool_out thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:02,910 | INFO     | [payload] validate_post thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:02,938 | INFO     | [job] validate thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:03,024 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:03,127 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:03,137 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:03,353 | INFO     | [job] control thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:04,709 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:11,545 | INFO     | job.realtimelogging is not enabled
[2025-12-01 07:21:01] 2025-12-01 06:20:12,551 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 07:21:01] 2025-12-01 06:20:31,782 | INFO     | PID=3501899 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 07:21:01] 2025-12-01 06:20:31,782 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 07:21:01] 2025-12-01 06:20:31,782 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 07:21:01] 2025-12-01 06:20:31,782 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 07:21:01] 2025-12-01 06:20:54,907 | INFO     | [monitor] cgroup control has ended
[2025-12-01 07:21:01] 2025-12-01 06:20:55,790 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139638084941632)>', '<ExcThread(monitor, started 139637121062656)>']
[2025-12-01 07:21:01] 2025-12-01 06:20:55,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 07:21:01] 2025-12-01 06:20:55,910 | INFO     | [monitor] control thread has ended
[2025-12-01 07:21:01] 2025-12-01 06:21:00,816 | INFO     | all workflow threads have been joined
[2025-12-01 07:21:01] 2025-12-01 06:21:00,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 07:21:01] 2025-12-01 06:21:00,816 | INFO     | traces error code: 0
[2025-12-01 07:21:01] 2025-12-01 06:21:00,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 07:21:01] 2025-12-01 06:21:00,901 [wrapper] ==== pilot stdout END ====
[2025-12-01 07:21:01] 2025-12-01 06:21:00,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 07:21:01] 2025-12-01 06:21:00,910 [wrapper] pilotpid: 3501899
[2025-12-01 07:21:01] 2025-12-01 06:21:00,914 [wrapper] Pilot exit status: 0
[2025-12-01 07:21:01] 2025-12-01 06:21:00,925 [wrapper] pandaids: 6898988807
[2025-12-01 07:21:01] 2025-12-01 06:21:00,951 [wrapper] cleanup supervisor_pilot 3557300 3501900
[2025-12-01 07:21:01] 2025-12-01 06:21:00,955 [wrapper] Test setup, not cleaning
[2025-12-01 07:21:01] 2025-12-01 06:21:00,959 [wrapper] apfmon messages muted
[2025-12-01 07:21:01] 2025-12-01 06:21:00,963 [wrapper] ==== wrapper stdout END ====
[2025-12-01 07:21:01] 2025-12-01 06:21:00,967 [wrapper] ==== wrapper stderr END ====
[2025-12-01 07:21:01]  *** Error codes and diagnostics ***
[2025-12-01 07:21:01]     "exeErrorCode": 0,
[2025-12-01 07:21:01]     "exeErrorDiag": "",
[2025-12-01 07:21:01]     "pilotErrorCode": 0,
[2025-12-01 07:21:01]     "pilotErrorDiag": "",
[2025-12-01 07:21:01]  *** Listing of results directory ***
[2025-12-01 07:21:01] total 1317668
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc    576529 Nov 27 02:09 pilot3.tar.gz
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc      5112 Nov 27 02:25 queuedata.json
[2025-12-01 07:21:01] -rwx------ 1 boinc boinc     36292 Nov 27 02:25 runpilot2-wrapper.sh
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc       100 Dec  1 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 07:21:01] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 00:18 run_atlas
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc       105 Dec  1 00:18 job.xml
[2025-12-01 07:21:01] -rw-r--r-- 2 boinc boinc 411033443 Dec  1 00:18 EVNT.47483658._002772.pool.root.1
[2025-12-01 07:21:01] -rw-r--r-- 2 boinc boinc    590106 Dec  1 00:18 input.tar.gz
[2025-12-01 07:21:01] -rw-r--r-- 2 boinc boinc     15847 Dec  1 00:18 start_atlas.sh
[2025-12-01 07:21:01] drwxrwx--x 2 boinc boinc      4096 Dec  1 00:18 shared
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc         0 Dec  1 00:18 boinc_setup_complete
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc      6378 Dec  1 00:18 init_data.xml
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc         0 Dec  1 00:18 boinc_lockfile
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc      2785 Dec  1 00:18 pandaJob.out
[2025-12-01 07:21:01] -rw------- 1 boinc boinc    993245 Dec  1 00:18 agis_schedconf.cvmfs.json
[2025-12-01 07:21:01] drwx------ 5 boinc boinc      4096 Dec  1 00:18 pilot3
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc       532 Dec  1 07:15 boinc_task_state.xml
[2025-12-01 07:21:01] -rw------- 1 boinc boinc 924693408 Dec  1 07:19 HITS.47556161._007541.pool.root.1
[2025-12-01 07:21:01] -rw------- 1 boinc boinc      1028 Dec  1 07:19 memory_monitor_summary.json
[2025-12-01 07:21:01] -rw------- 1 boinc boinc        95 Dec  1 07:19 pilot_heartbeat.json
[2025-12-01 07:21:01] -rw------- 1 boinc boinc   1516240 Dec  1 07:19 agis_ddmendpoints.agis.ALL.json
[2025-12-01 07:21:01] -rw------- 1 boinc boinc   1263938 Dec  1 07:19 log.47556161._007541.job.log.tgz.1
[2025-12-01 07:21:01] -rw------- 1 boinc boinc      8568 Dec  1 07:19 heartbeat.json
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc      8192 Dec  1 07:20 boinc_mmap_file
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc        28 Dec  1 07:20 wrapper_checkpoint.txt
[2025-12-01 07:21:01] -rw------- 1 boinc boinc      4824 Dec  1 07:21 pilotlog.txt
[2025-12-01 07:21:01] -rw------- 1 boinc boinc   3565275 Dec  1 07:21 log.47556161._007541.job.log.1
[2025-12-01 07:21:01] -rw------- 1 boinc boinc       353 Dec  1 07:21 output.list
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc       620 Dec  1 07:21 runtime_log
[2025-12-01 07:21:01] -rw------- 1 boinc boinc   4853760 Dec  1 07:21 result.tar.gz
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc      8898 Dec  1 07:21 runtime_log.err
[2025-12-01 07:21:01] -rw------- 1 boinc boinc       665 Dec  1 07:21 pN0KDmLwfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSTNKDmW4Rmim.diag
[2025-12-01 07:21:01] -rw-r--r-- 1 boinc boinc      8882 Dec  1 07:21 stderr.txt
[2025-12-01 07:21:01] HITS file was successfully produced:
[2025-12-01 07:21:01] -rw------- 1 boinc boinc 924693408 Dec  1 07:19 shared/HITS.pool.root.1
[2025-12-01 07:21:01]  *** Contents of shared directory: ***
[2025-12-01 07:21:01] total 1309764
[2025-12-01 07:21:01] -rw-r--r-- 2 boinc boinc 411033443 Dec  1 00:18 ATLAS.root_0
[2025-12-01 07:21:01] -rw-r--r-- 2 boinc boinc    590106 Dec  1 00:18 input.tar.gz
[2025-12-01 07:21:01] -rw-r--r-- 2 boinc boinc     15847 Dec  1 00:18 start_atlas.sh
[2025-12-01 07:21:01] -rw------- 1 boinc boinc 924693408 Dec  1 07:19 HITS.pool.root.1
[2025-12-01 07:21:01] -rw------- 1 boinc boinc   4853760 Dec  1 07:21 result.tar.gz
07:21:02 (3498092): run_atlas exited; CPU time 99105.761085
07:21:02 (3498092): called boinc_finish(0)

</stderr_txt>
]]>

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