Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:45:27 (27519): wrapper (7.7.26015): starting
01:45:27 (27519): wrapper: running run_atlas (--nthreads 12)
[2025-11-28 01:45:27] Arguments: --nthreads 12
[2025-11-28 01:45:27] Threads: 12
[2025-11-28 01:45:27] Checking for CVMFS
[2025-11-28 01:45:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 01:45:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 01:45:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 01:45:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 01:45:27] 2.11.2.0 2924 290173 99508 153400 1 81 11063201 20275201 1 130560 4 132362380 99.966 17462782 14138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 01:45:27] CVMFS is ok
[2025-11-28 01:45:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 01:45:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 01:45:27] Further information can be found at the LHC@home message board.
[2025-11-28 01:45:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 01:45:27] Checking for apptainer binary...
[2025-11-28 01:45:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 01:45:27] Running /usr/bin/apptainer --version
[2025-11-28 01:45:27] apptainer version 1.3.2-1.el7
[2025-11-28 01:45:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 01:45:29] c-205-28.aglt2.org
[2025-11-28 01:45:29] apptainer works
[2025-11-28 01:45:29] Set ATHENA_PROC_NUMBER=12
[2025-11-28 01:45:29] Set ATHENA_CORE_NUMBER=12
[2025-11-28 01:45:29] Starting ATLAS job with PandaID=6892546606
[2025-11-28 01:45:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 09:10:33]  *** The last 200 lines of the pilot log: ***
[2025-11-28 09:10:33] 2025-11-28 14:09:32,915 | INFO     | extracted standard info from prmon json
[2025-11-28 09:10:33] 2025-11-28 14:09:32,915 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 09:10:33] 2025-11-28 14:09:32,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 09:10:33] 2025-11-28 14:09:32,922 | INFO     | fitting pss+swap vs Time
[2025-11-28 09:10:33] 2025-11-28 14:09:32,922 | INFO     | sum of square deviations: 25700170921.603424
[2025-11-28 09:10:33] 2025-11-28 14:09:32,926 | INFO     | sum of deviations: 253061964439.0826
[2025-11-28 09:10:33] 2025-11-28 14:09:32,926 | INFO     | mean x: 1764325639.7683487
[2025-11-28 09:10:33] 2025-11-28 14:09:32,927 | INFO     | mean y: 3424745.6146788993
[2025-11-28 09:10:33] 2025-11-28 14:09:32,927 | INFO     | intersect: -17369366807.87292
[2025-11-28 09:10:33] 2025-11-28 14:09:32,927 | INFO     | chi2: 7.27460650193051
[2025-11-28 09:10:33] 2025-11-28 14:09:32,928 | INFO     | sum of square deviations: 24826125101.23903
[2025-11-28 09:10:33] 2025-11-28 14:09:32,932 | INFO     | sum of deviations: 407255034528.65796
[2025-11-28 09:10:33] 2025-11-28 14:09:32,932 | INFO     | mean x: 1764325487.2714617
[2025-11-28 09:10:33] 2025-11-28 14:09:32,932 | INFO     | mean y: 3451620.874709977
[2025-11-28 09:10:33] 2025-11-28 14:09:32,932 | INFO     | intersect: -28939060926.227127
[2025-11-28 09:10:33] 2025-11-28 14:09:32,933 | INFO     | chi2: 4.601379108516284
[2025-11-28 09:10:33] 2025-11-28 14:09:32,933 | INFO     | current chi2=4.601379108516284 (change=36.747381356019936 %)
[2025-11-28 09:10:33] 2025-11-28 14:09:32,933 | INFO     | sum of square deviations: 23972126168.366154
[2025-11-28 09:10:33] 2025-11-28 14:09:32,937 | INFO     | sum of deviations: 514232577110.91547
[2025-11-28 09:10:33] 2025-11-28 14:09:32,937 | INFO     | mean x: 1764325334.774648
[2025-11-28 09:10:33] 2025-11-28 14:09:32,938 | INFO     | mean y: 3470716.603286385
[2025-11-28 09:10:33] 2025-11-28 14:09:32,938 | INFO     | intersect: -37843550335.72593
[2025-11-28 09:10:33] 2025-11-28 14:09:32,938 | INFO     | chi2: 3.2824604169362783
[2025-11-28 09:10:33] 2025-11-28 14:09:32,938 | INFO     | current chi2=3.2824604169362783 (change=28.66355195856251 %)
[2025-11-28 09:10:33] 2025-11-28 14:09:32,939 | INFO     | sum of square deviations: 23137941560.484554
[2025-11-28 09:10:33] 2025-11-28 14:09:32,943 | INFO     | sum of deviations: 582185938010.0521
[2025-11-28 09:10:33] 2025-11-28 14:09:32,943 | INFO     | mean x: 1764325182.2779098
[2025-11-28 09:10:33] 2025-11-28 14:09:32,943 | INFO     | mean y: 3483116.059382423
[2025-11-28 09:10:33] 2025-11-28 14:09:32,943 | INFO     | intersect: -44389632343.84976
[2025-11-28 09:10:33] 2025-11-28 14:09:32,943 | INFO     | chi2: 2.6124384705544945
[2025-11-28 09:10:33] 2025-11-28 14:09:32,944 | INFO     | current chi2=2.6124384705544945 (change=20.412186630635944 %)
[2025-11-28 09:10:33] 2025-11-28 14:09:32,944 | INFO     | right removable region: 420
[2025-11-28 09:10:33] 2025-11-28 14:09:32,944 | INFO     | sum of square deviations: 24826053731.239033
[2025-11-28 09:10:33] 2025-11-28 14:09:32,948 | INFO     | sum of deviations: 103650519542.78386
[2025-11-28 09:10:33] 2025-11-28 14:09:32,948 | INFO     | mean x: 1764325792.2714617
[2025-11-28 09:10:33] 2025-11-28 14:09:32,948 | INFO     | mean y: 3450742.1044083526
[2025-11-28 09:10:33] 2025-11-28 14:09:32,949 | INFO     | intersect: -7362733468.701447
[2025-11-28 09:10:33] 2025-11-28 14:09:32,949 | INFO     | chi2: 4.814740696318521
[2025-11-28 09:10:33] 2025-11-28 14:09:32,949 | INFO     | current chi2=4.814740696318521 (change=33.814417384077046 %)
[2025-11-28 09:10:33] 2025-11-28 14:09:32,950 | INFO     | sum of square deviations: 23972009962.913208
[2025-11-28 09:10:33] 2025-11-28 14:09:32,954 | INFO     | sum of deviations: 70229902457.23709
[2025-11-28 09:10:33] 2025-11-28 14:09:32,954 | INFO     | mean x: 1764325944.7723005
[2025-11-28 09:10:33] 2025-11-28 14:09:32,954 | INFO     | mean y: 3456704.0539906104
[2025-11-28 09:10:33] 2025-11-28 14:09:32,954 | INFO     | intersect: -5165423135.218082
[2025-11-28 09:10:33] 2025-11-28 14:09:32,954 | INFO     | chi2: 4.744450790499433
[2025-11-28 09:10:33] 2025-11-28 14:09:32,955 | INFO     | current chi2=4.744450790499433 (change=1.4598897480155795 %)
[2025-11-28 09:10:33] 2025-11-28 14:09:32,955 | INFO     | left removable region: 20
[2025-11-28 09:10:33] 2025-11-28 14:09:32,955 | INFO     | sum of square deviations: 19845230854.359943
[2025-11-28 09:10:33] 2025-11-28 14:09:32,959 | INFO     | sum of deviations: 354971662794.53046
[2025-11-28 09:10:33] 2025-11-28 14:09:32,959 | INFO     | mean x: 1764325761.79
[2025-11-28 09:10:33] 2025-11-28 14:09:32,959 | INFO     | mean y: 3525367.7325
[2025-11-28 09:10:33] 2025-11-28 14:09:32,959 | INFO     | intersect: -31554971178.364857
[2025-11-28 09:10:33] 2025-11-28 14:09:32,960 | INFO     | chi2: 0.030217092188389152
[2025-11-28 09:10:33] 2025-11-28 14:09:32,960 | INFO     | current memory leak: 17.89 B/s (using 400 data points, chi2=0.03)
[2025-11-28 09:10:33] 2025-11-28 14:09:32,960 | INFO     | could have reported an average CPU frequency of 2416 MHz (18 samples)
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | ..............................
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | . Timing measurements:
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | . get job = 0 s
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | . initial setup = 2 s
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | . payload setup = 7 s
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | . stage-in = 0 s
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | . payload execution = 26589 s
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | . stage-out = 3 s
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | . log creation = 0 s
[2025-11-28 09:10:33] 2025-11-28 14:09:32,961 | INFO     | ..............................
[2025-11-28 09:10:33] 2025-11-28 14:09:33,161 | INFO     | 
[2025-11-28 09:10:33] 2025-11-28 14:09:33,162 | INFO     | job summary report
[2025-11-28 09:10:33] 2025-11-28 14:09:33,162 | INFO     | --------------------------------------------------
[2025-11-28 09:10:33] 2025-11-28 14:09:33,162 | INFO     | PanDA job id: 6892546606
[2025-11-28 09:10:33] 2025-11-28 14:09:33,162 | INFO     | task id: 47493029
[2025-11-28 09:10:33] 2025-11-28 14:09:33,162 | INFO     | errors: (none)
[2025-11-28 09:10:33] 2025-11-28 14:09:33,163 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 09:10:33] 2025-11-28 14:09:33,163 | INFO     | pilot state: finished 
[2025-11-28 09:10:33] 2025-11-28 14:09:33,163 | INFO     | transexitcode: 0
[2025-11-28 09:10:33] 2025-11-28 14:09:33,163 | INFO     | exeerrorcode: 0
[2025-11-28 09:10:33] 2025-11-28 14:09:33,163 | INFO     | exeerrordiag: 
[2025-11-28 09:10:33] 2025-11-28 14:09:33,163 | INFO     | exitcode: 0
[2025-11-28 09:10:33] 2025-11-28 14:09:33,163 | INFO     | exitmsg: OK
[2025-11-28 09:10:33] 2025-11-28 14:09:33,163 | INFO     | cpuconsumptiontime: 301391 s
[2025-11-28 09:10:33] 2025-11-28 14:09:33,163 | INFO     | nevents: 1000
[2025-11-28 09:10:33] 2025-11-28 14:09:33,164 | INFO     | neventsw: 0
[2025-11-28 09:10:33] 2025-11-28 14:09:33,164 | INFO     | pid: 5442
[2025-11-28 09:10:33] 2025-11-28 14:09:33,164 | INFO     | pgrp: 5442
[2025-11-28 09:10:33] 2025-11-28 14:09:33,164 | INFO     | corecount: 12
[2025-11-28 09:10:33] 2025-11-28 14:09:33,164 | INFO     | event service: False
[2025-11-28 09:10:33] 2025-11-28 14:09:33,164 | INFO     | sizes: {0: 2284133, 1: 2284332, 5: 2284594, 11: 2284650, 26600: 2322179, 26603: 2331173, 26606: 2331357, 26613: 2331603}
[2025-11-28 09:10:33] 2025-11-28 14:09:33,164 | INFO     | --------------------------------------------------
[2025-11-28 09:10:33] 2025-11-28 14:09:33,164 | INFO     | 
[2025-11-28 09:10:33] 2025-11-28 14:09:33,164 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 09:10:33] 2025-11-28 14:09:33,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,191 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,191 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,191 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,191 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,191 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,191 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 09:10:33] 2025-11-28 14:09:33,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,192 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 09:10:33] 2025-11-28 14:09:33,192 | INFO     | job 6892546606 has completed (purged errors)
[2025-11-28 09:10:33] 2025-11-28 14:09:33,192 | INFO     | overall cleanup function is called
[2025-11-28 09:10:33] 2025-11-28 14:09:34,209 | INFO     | --- collectZombieJob: --- 10, [5442]
[2025-11-28 09:10:33] 2025-11-28 14:09:34,209 | INFO     | zombie collector waiting for pid 5442
[2025-11-28 09:10:33] 2025-11-28 14:09:34,209 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 09:10:33] 2025-11-28 14:09:34,210 | INFO     | collected zombie processes
[2025-11-28 09:10:33] 2025-11-28 14:09:34,210 | INFO     | will attempt to kill all subprocesses of pid=5442
[2025-11-28 09:10:33] 2025-11-28 14:09:34,303 | INFO     | process IDs to be killed: [5442] (in reverse order)
[2025-11-28 09:10:33] 2025-11-28 14:09:34,355 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 09:10:33] 2025-11-28 14:09:34,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 09:10:33] 2025-11-28 14:09:34,359 | INFO     | did not find any defunct processes belonging to 5442
[2025-11-28 09:10:33] 2025-11-28 14:09:34,361 | INFO     | did not find any defunct processes belonging to 5442
[2025-11-28 09:10:33] 2025-11-28 14:09:34,364 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 09:10:33] 2025-11-28 14:09:34,364 | INFO     | ready for new job
[2025-11-28 09:10:33] 2025-11-28 14:09:34,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 09:10:33] 2025-11-28 14:09:34,366 | INFO     | ***************************************
[2025-11-28 09:10:33] 2025-11-28 14:09:34,367 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 09:10:33] 2025-11-28 14:09:34,367 | INFO     | ***************************************
[2025-11-28 09:10:33] 2025-11-28 14:09:34,367 | INFO     | 
[2025-11-28 09:10:33] 2025-11-28 14:09:34,367 | INFO     | architecture information:
[2025-11-28 09:10:33] 2025-11-28 14:09:34,368 | INFO     | executing command: cat /etc/os-release
[2025-11-28 09:10:33] 2025-11-28 14:09:34,384 | INFO     | cat /etc/os-release:
[2025-11-28 09:10:33] NAME="CentOS Linux"
[2025-11-28 09:10:33] VERSION="7 (Core)"
[2025-11-28 09:10:33] ID="centos"
[2025-11-28 09:10:33] ID_LIKE="rhel fedora"
[2025-11-28 09:10:33] VERSION_ID="7"
[2025-11-28 09:10:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 09:10:33] ANSI_COLOR="0;31"
[2025-11-28 09:10:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 09:10:33] HOME_URL="https://www.centos.org/"
[2025-11-28 09:10:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 09:10:33] 
[2025-11-28 09:10:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 09:10:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 09:10:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 09:10:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 09:10:33] 
[2025-11-28 09:10:33] 2025-11-28 14:09:34,385 | INFO     | ***************************************
[2025-11-28 09:10:33] 2025-11-28 14:09:34,888 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 09:10:33] 2025-11-28 14:09:34,904 | INFO     | sufficient remaining disk space (28224520192 B)
[2025-11-28 09:10:33] 2025-11-28 14:09:34,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 09:10:33] 2025-11-28 14:09:34,905 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 09:10:33] 2025-11-28 14:09:34,905 | INFO     | update_server=False
[2025-11-28 09:10:33] 2025-11-28 14:09:34,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 09:10:33] 2025-11-28 14:09:34,905 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 09:10:33] 2025-11-28 14:09:34,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 09:10:33] 2025-11-28 14:09:34,906 | INFO     | aborting loop
[2025-11-28 09:10:33] 2025-11-28 14:09:35,351 | INFO     | all data control threads have been joined
[2025-11-28 09:10:33] 2025-11-28 14:09:35,404 | INFO     | all payload control threads have been joined
[2025-11-28 09:10:33] 2025-11-28 14:09:35,773 | INFO     | all job control threads have been joined
[2025-11-28 09:10:33] 2025-11-28 14:09:35,911 | INFO     | [job] retrieve thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:35,912 | INFO     | [job] queue monitor thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:35,912 | INFO     | [job] job monitor thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:35,940 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:36,103 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:36,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 09:10:33] 2025-11-28 14:09:36,356 | INFO     | [data] control thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:36,409 | INFO     | [payload] control thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:36,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 09:10:33] 2025-11-28 14:09:36,762 | INFO     | [payload] validate_post thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:36,779 | INFO     | [job] control thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:36,897 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:36,937 | INFO     | [data] copytool_in thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:36,970 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:37,197 | INFO     | [payload] failed_post thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:37,216 | INFO     | [job] validate thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:38,277 | INFO     | [data] copytool_out thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:09:40,762 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 09:10:33] 2025-11-28 14:10:04,452 | INFO     | PID=31294 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 09:10:33] 2025-11-28 14:10:04,453 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 09:10:33] 2025-11-28 14:10:04,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 09:10:33] 2025-11-28 14:10:04,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 09:10:33] 2025-11-28 14:10:26,691 | INFO     | [monitor] cgroup control has ended
[2025-11-28 09:10:33] 2025-11-28 14:10:27,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139808035571520)>', '<ExcThread(monitor, started 139807116207872)>']
[2025-11-28 09:10:33] 2025-11-28 14:10:28,567 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 09:10:33] 2025-11-28 14:10:28,567 | INFO     | [monitor] control thread has ended
[2025-11-28 09:10:33] 2025-11-28 14:10:32,976 | INFO     | all workflow threads have been joined
[2025-11-28 09:10:33] 2025-11-28 14:10:32,977 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 09:10:33] 2025-11-28 14:10:32,977 | INFO     | traces error code: 0
[2025-11-28 09:10:33] 2025-11-28 14:10:32,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 09:10:33] 2025-11-28 14:10:33,083 [wrapper] ==== pilot stdout END ====
[2025-11-28 09:10:33] 2025-11-28 14:10:33,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 09:10:33] 2025-11-28 14:10:33,091 [wrapper] pilotpid: 31294
[2025-11-28 09:10:33] 2025-11-28 14:10:33,095 [wrapper] Pilot exit status: 0
[2025-11-28 09:10:33] 2025-11-28 14:10:33,109 [wrapper] pandaids: 6892546606
[2025-11-28 09:10:33] 2025-11-28 14:10:33,157 [wrapper] cleanup supervisor_pilot 29518 31295
[2025-11-28 09:10:33] 2025-11-28 14:10:33,162 [wrapper] Test setup, not cleaning
[2025-11-28 09:10:33] 2025-11-28 14:10:33,165 [wrapper] apfmon messages muted
[2025-11-28 09:10:33] 2025-11-28 14:10:33,169 [wrapper] ==== wrapper stdout END ====
[2025-11-28 09:10:33] 2025-11-28 14:10:33,173 [wrapper] ==== wrapper stderr END ====
[2025-11-28 09:10:33]  *** Error codes and diagnostics ***
[2025-11-28 09:10:33]     "exeErrorCode": 0,
[2025-11-28 09:10:33]     "exeErrorDiag": "",
[2025-11-28 09:10:33]     "pilotErrorCode": 0,
[2025-11-28 09:10:33]     "pilotErrorDiag": "",
[2025-11-28 09:10:33]  *** Listing of results directory ***
[2025-11-28 09:10:33] total 1332280
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 03:16 pilot3.tar.gz
[2025-11-28 09:10:33] -rwx------ 1 boincer umatlas     36292 Nov 19 03:28 runpilot2-wrapper.sh
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 03:28 queuedata.json
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas       100 Nov 28 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 09:10:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 01:45 run_atlas
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas       105 Nov 28 01:45 job.xml
[2025-11-28 09:10:33] -rw-r--r-- 2 boincer umatlas 411165498 Nov 28 01:45 EVNT.47493027._000301.pool.root.1
[2025-11-28 09:10:33] -rw-r--r-- 2 boincer umatlas     15120 Nov 28 01:45 start_atlas.sh
[2025-11-28 09:10:33] drwxrwx--x 2 boincer umatlas      4096 Nov 28 01:45 shared
[2025-11-28 09:10:33] -rw-r--r-- 2 boincer umatlas    590101 Nov 28 01:45 input.tar.gz
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas         0 Nov 28 01:45 boinc_lockfile
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas      2773 Nov 28 01:45 pandaJob.out
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas    991866 Nov 28 01:45 agis_schedconf.cvmfs.json
[2025-11-28 09:10:33] drwx------ 5 boincer umatlas      4096 Nov 28 01:45 pilot3
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas       532 Nov 28 08:53 boinc_task_state.xml
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas      5956 Nov 28 09:04 init_data.xml
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas 937339119 Nov 28 09:08 HITS.47493029._002966.pool.root.1
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas      1074 Nov 28 09:09 memory_monitor_summary.json
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas   1516240 Nov 28 09:09 agis_ddmendpoints.agis.ALL.json
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas   2193779 Nov 28 09:09 log.47493029._002966.job.log.tgz.1
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas      8666 Nov 28 09:09 heartbeat.json
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas        95 Nov 28 09:10 pilot_heartbeat.json
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 09:10 boinc_mmap_file
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas        29 Nov 28 09:10 wrapper_checkpoint.txt
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas      4746 Nov 28 09:10 pilotlog.txt
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas   3722748 Nov 28 09:10 log.47493029._002966.job.log.1
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas       353 Nov 28 09:10 output.list
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas       620 Nov 28 09:10 runtime_log
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas   5939200 Nov 28 09:10 result.tar.gz
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas      8706 Nov 28 09:10 runtime_log.err
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas       669 Nov 28 09:10 LJDLDmQjsf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm55FKDmJKzFym.diag
[2025-11-28 09:10:33] -rw-r--r-- 1 boincer umatlas     21093 Nov 28 09:10 stderr.txt
[2025-11-28 09:10:33] HITS file was successfully produced:
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas 937339119 Nov 28 09:08 shared/HITS.pool.root.1
[2025-11-28 09:10:33]  *** Contents of shared directory: ***
[2025-11-28 09:10:33] total 1323304
[2025-11-28 09:10:33] -rw-r--r-- 2 boincer umatlas 411165498 Nov 28 01:45 ATLAS.root_0
[2025-11-28 09:10:33] -rw-r--r-- 2 boincer umatlas     15120 Nov 28 01:45 start_atlas.sh
[2025-11-28 09:10:33] -rw-r--r-- 2 boincer umatlas    590101 Nov 28 01:45 input.tar.gz
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas 937339119 Nov 28 09:08 HITS.pool.root.1
[2025-11-28 09:10:33] -rw------- 1 boincer umatlas   5939200 Nov 28 09:10 result.tar.gz
09:10:34 (27519): run_atlas exited; CPU time 294426.439952
09:10:34 (27519): called boinc_finish(0)

</stderr_txt>
]]>

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