Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-01 13:16:20 (9188): vboxwrapper version 26210
2025-12-01 13:16:20 (9188): BOINC client version: 8.0.2
2025-12-01 13:16:20 (9188): Detected: VirtualBox VboxManage Interface (Version: 6.1.30)
2025-12-01 13:16:21 (9188): Successfully copied 'init_data.xml' to the shared directory.
2025-12-01 13:16:21 (9188): Create VM. (boinc_1b34b4f91009268e, slot#3)
2025-12-01 13:16:21 (9188): Setting Memory Size for VM. (4800MB)
2025-12-01 13:16:22 (9188): Setting CPU Count for VM. (8)
2025-12-01 13:16:22 (9188): Setting Chipset Options for VM.
2025-12-01 13:16:22 (9188): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-01 13:16:22 (9188): Setting Boot Options for VM.
2025-12-01 13:16:23 (9188): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-01 13:16:23 (9188): Enabling VM Network Access.
2025-12-01 13:16:24 (9188): Disabling USB Support for VM.
2025-12-01 13:16:24 (9188): Disabling COM Port Support for VM.
2025-12-01 13:16:24 (9188): Disabling LPT Port Support for VM.
2025-12-01 13:16:24 (9188): Disabling Audio Support for VM.
2025-12-01 13:16:25 (9188): Disabling Clipboard Support for VM.
2025-12-01 13:16:25 (9188): Disabling Drag and Drop Support for VM.
2025-12-01 13:16:25 (9188): Adding storage controller(s) to VM.
2025-12-01 13:16:25 (9188): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-01 13:16:26 (9188): Adding VirtualBox Guest Additions to VM.
2025-12-01 13:16:26 (9188): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-01 13:16:26 (9188): forwarding host port 57037 to guest port 80
2025-12-01 13:16:27 (9188): Enabling remote desktop for VM.
2025-12-01 13:16:27 (9188): Required extension pack not installed, remote desktop not enabled.
2025-12-01 13:16:27 (9188): Enabling shared directory for VM.
2025-12-01 13:16:27 (9188): Starting VM using VBoxManage interface. (boinc_1b34b4f91009268e, slot#3)
2025-12-01 13:16:32 (9188): Successfully started VM. (PID = '13156')
2025-12-01 13:16:32 (9188): Reporting VM Process ID to BOINC.
2025-12-01 13:16:32 (9188): Guest Log: BIOS: VirtualBox 6.1.30
2025-12-01 13:16:32 (9188): Guest Log: CPUID EDX: 0x178bfbff
2025-12-01 13:16:32 (9188): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-01 13:16:32 (9188): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-01 13:16:32 (9188): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-01 13:16:32 (9188): Detected: Web Application Enabled (http://localhost:57037)
2025-12-01 13:16:32 (9188): Preference change detected
2025-12-01 13:16:32 (9188): Setting CPU throttle for VM. (100%)
2025-12-01 13:16:32 (9188): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-01 13:16:34 (9188): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-01 13:16:34 (9188): Guest Log: BIOS: Booting from Hard Disk...
2025-12-01 13:16:37 (9188): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-01 13:16:37 (9188): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-01 13:16:37 (9188): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-01 13:16:43 (9188): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-01 13:16:43 (9188): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-12-01 13:16:47 (9188): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-01 13:16:47 (9188): Guest Log: 00:00:00.000090 main     Log opened 2025-12-01T13:16:46.308765000Z
2025-12-01 13:16:47 (9188): Guest Log: 00:00:00.000201 main     OS Product: Linux
2025-12-01 13:16:47 (9188): Guest Log: 00:00:00.000228 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-01 13:16:47 (9188): Guest Log: 00:00:00.000248 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-01 13:16:47 (9188): Guest Log: 00:00:00.000265 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-01 13:16:47 (9188): Guest Log: 00:00:00.000266 main     Process ID: 1368
2025-12-01 13:16:47 (9188): Guest Log: 00:00:00.000266 main     Package type: LINUX_64BITS_GENERIC
2025-12-01 13:16:47 (9188): Guest Log: 00:00:00.000833 main     5.2.32 r132073 started. Verbose level = 0
2025-12-01 13:16:47 (9188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-01 13:16:47 (9188): Guest Log: [INFO] Mounting shared directory
2025-12-01 13:16:47 (9188): Guest Log: [INFO] Checking for init_data.xml
2025-12-01 13:16:52 (9188): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-01 13:16:52 (9188): Guest Log: [INFO] Detected branch: prod
2025-12-01 13:16:52 (9188): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-01 13:16:52 (9188): Guest Log: Copying input files
2025-12-01 13:16:53 (9188): Guest Log: Copied input files into RunAtlas.
2025-12-01 13:16:53 (9188): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-01 13:16:53 (9188): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-01 13:16:53 (9188): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-01 13:16:53 (9188): Guest Log: Further information can be found at the LHC@home message board.
2025-12-01 13:16:57 (9188): Guest Log: 00:00:10.004753 timesync vgsvcTimeSyncWorker: Radical guest time change: -35 988 923 105 000ns (GuestNow=1 764 559 017 387 636 000 ns GuestLast=1 764 595 006 310 741 000 ns fSetTimeLastLoop=true )
2025-12-01 13:17:55 (9188): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-01 13:17:56 (9188): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-01 13:17:56 (9188): Guest Log: 2.6.3.0 1645 1 30164 153503 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-12-01 13:17:56 (9188): Guest Log: copied the webapp to /var/www
2025-12-01 13:17:56 (9188): Guest Log: ATHENA_PROC_NUMBER=8
2025-12-01 13:17:56 (9188): Guest Log: ATHENA_CORE_NUMBER=8
2025-12-01 13:17:56 (9188): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-01 13:17:56 (9188): Guest Log:  *** Starting ATLAS job. (PandaID=6898377093 taskID=47556161) ***
2025-12-01 14:56:37 (9188): Status Report: Elapsed Time: '6000.000000'
2025-12-01 14:56:37 (9188): Status Report: CPU Time: '41181.843750'
2025-12-01 16:36:41 (9188): Status Report: Elapsed Time: '12000.000000'
2025-12-01 16:36:41 (9188): Status Report: CPU Time: '87538.562500'
2025-12-01 18:16:46 (9188): Status Report: Elapsed Time: '18000.000000'
2025-12-01 18:16:46 (9188): Status Report: CPU Time: '133884.921875'
2025-12-01 19:56:50 (9188): Status Report: Elapsed Time: '24000.000000'
2025-12-01 19:56:50 (9188): Status Report: CPU Time: '180495.171875'
2025-12-01 21:02:47 (9188): Guest Log:  *** Job finished ***
2025-12-01 21:02:47 (9188): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-01 21:02:47 (9188): Guest Log: 2025-12-01 11:02:22,270 | INFO     | all workflow threads have been joined
2025-12-01 21:02:47 (9188): Guest Log: 2025-12-01 11:02:22,270 | INFO     | end of generic workflow (traces error code: 0)
2025-12-01 21:02:47 (9188): Guest Log: 2025-12-01 11:02:22,271 | INFO     | traces error code: 0
2025-12-01 21:02:47 (9188): Guest Log: 2025-12-01 11:02:22,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-01 21:02:47 (9188): Guest Log: 2025-12-01 11:02:35,596 | INFO     | PID=6095 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-12-01 21:02:47 (9188): Guest Log: 2025-12-01 11:02:35,597 | INFO     | found 0 job(s) in 20 queues
2025-12-01 21:02:47 (9188): Guest Log: 2025-12-01 11:02:35,597 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-01 21:02:47 (9188): Guest Log: 2025-12-01 11:02:35,597 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-01 21:02:47 (9188): Guest Log: 2025-12-01 11:02:35,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,597 | INFO     | [monitor] control thread has ended
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,701 [wrapper] ==== pilot stdout END ====
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,705 [wrapper] ==== wrapper stdout RESUME ====
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,709 [wrapper] pilotpid: 6095
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,712 [wrapper] Pilot exit status: 0
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,725 [wrapper] pandaids: 6898377093
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,748 [wrapper] cleanup supervisor_pilot 31233 6096
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,752 [wrapper] Test setup, not cleaning
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,757 [wrapper] apfmon messages muted
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,761 [wrapper] ==== wrapper stdout END ====
2025-12-01 21:02:48 (9188): Guest Log: 2025-12-01 11:02:35,765 [wrapper] ==== wrapper stderr END ====
2025-12-01 21:02:48 (9188): Guest Log:  *** Error codes and diagnostics ***
2025-12-01 21:02:48 (9188): Guest Log:     "exeErrorCode": 0,
2025-12-01 21:02:48 (9188): Guest Log:     "exeErrorDiag": "",
2025-12-01 21:02:48 (9188): Guest Log:     "pilotErrorCode": 0,
2025-12-01 21:02:48 (9188): Guest Log:     "pilotErrorDiag": "",
2025-12-01 21:02:48 (9188): Guest Log:  *** Listing of results directory ***
2025-12-01 21:02:48 (9188): Guest Log: total 919728
2025-12-01 21:02:48 (9188): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 26 16:12 pilot3.tar.gz
2025-12-01 21:02:48 (9188): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 26 16:14 queuedata.json
2025-12-01 21:02:48 (9188): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 26 16:15 runpilot2-wrapper.sh
2025-12-01 21:02:48 (9188): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec  1 03:16 start_atlas.sh
2025-12-01 21:02:48 (9188): Guest Log: -rwxr-xr-x. 1 atlas atlas    590105 Dec  1 03:16 input.tar.gz
2025-12-01 21:02:48 (9188): Guest Log: -rwxr-xr-x. 1 atlas atlas      9229 Dec  1 03:16 init_data.xml
2025-12-01 21:02:48 (9188): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  1 03:16 EVNT.47483658._002569.pool.root.1 -> /data/./ATLAS.root_0
2025-12-01 21:02:48 (9188): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Dec  1 03:17 pandaJob.out
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas    993245 Dec  1 03:18 agis_schedconf.cvmfs.json
2025-12-01 21:02:48 (9188): Guest Log: drwx------. 5 atlas atlas      4096 Dec  1 03:18 pilot3
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas 927102558 Dec  1 11:01 HITS.47556161._005515.pool.root.1
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas        95 Dec  1 11:01 pilot_heartbeat.json
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas      1038 Dec  1 11:01 memory_monitor_summary.json
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec  1 11:01 agis_ddmendpoints.agis.ALL.json
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas   1733353 Dec  1 11:01 log.47556161._005515.job.log.tgz.1
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas      8649 Dec  1 11:02 heartbeat.json
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas       744 Dec  1 11:02 pilotlog.txt
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas   3691679 Dec  1 11:02 log.47556161._005515.job.log.1
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas       353 Dec  1 11:02 output.list
2025-12-01 21:02:48 (9188): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec  1 11:02 runtime_log
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas   5447680 Dec  1 11:02 result.tar.gz
2025-12-01 21:02:48 (9188): Guest Log: -rw-r--r--. 1 atlas atlas      8732 Dec  1 11:02 runtime_log.err
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas       654 Dec  1 11:02 0A4KDmzLXi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmT8MKDmtaDndn.diag
2025-12-01 21:02:48 (9188): Guest Log: Looking for outputfile HITS.47556161._005515.pool.root.1
2025-12-01 21:02:48 (9188): Guest Log: HITS file was successfully produced
2025-12-01 21:02:48 (9188): Guest Log: -rw-------. 1 atlas atlas 927102558 Dec  1 11:01 /home/atlas/RunAtlas/HITS.47556161._005515.pool.root.1
2025-12-01 21:02:50 (9188): Guest Log: Successfully finished the ATLAS job!
2025-12-01 21:02:50 (9188): Guest Log: Copying the results back to the shared directory!
2025-12-01 21:02:50 (9188): Guest Log:  *** Contents of shared directory: ***
2025-12-01 21:02:50 (9188): Guest Log: total 1312824
2025-12-01 21:02:50 (9188): Guest Log: -rwxrwxrwx. 1 root root 411152397 Dec  1 03:16 ATLAS.root_0
2025-12-01 21:02:50 (9188): Guest Log: -rwxrwxrwx. 1 root root 927102558 Dec  1  2025 HITS.pool.root.1
2025-12-01 21:02:50 (9188): Guest Log: -rwxrwxrwx. 1 root root      9229 Dec  1 03:16 init_data.xml
2025-12-01 21:02:50 (9188): Guest Log: -rwxrwxrwx. 1 root root    590105 Nov 28 06:13 input.tar.gz
2025-12-01 21:02:50 (9188): Guest Log: -rwxrwxrwx. 1 root root   5447680 Dec  1  2025 result.tar.gz
2025-12-01 21:02:50 (9188): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 28 06:13 start_atlas.sh
2025-12-01 21:02:50 (9188): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-01 21:02:50 (9188): VM Completion File Detected.
2025-12-01 21:02:50 (9188): Powering off VM.
2025-12-01 21:02:51 (9188): Successfully stopped VM.
2025-12-01 21:02:51 (9188): Deregistering VM. (boinc_1b34b4f91009268e, slot#3)
2025-12-01 21:02:51 (9188): Removing network bandwidth throttle group from VM.
2025-12-01 21:02:51 (9188): Removing VM from VirtualBox.
2025-12-01 21:02:57 (9188): called boinc_finish(0)

</stderr_txt>
]]>

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