Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:40:17 (1351444): wrapper (7.7.26015): starting
06:40:17 (1351444): wrapper: running run_atlas (--nthreads 3)
[2025-11-28 06:40:17] Arguments: --nthreads 3
[2025-11-28 06:40:17] Threads: 3
[2025-11-28 06:40:17] Checking for CVMFS
[2025-11-28 06:40:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 06:40:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 06:40:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 06:40:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 06:40:17] 2.9.2.0 1330245 4 46636 153399 3 88 36253771 36864000 0 130560 0 62632 100.000 1 200 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-28 06:40:17] CVMFS is ok
[2025-11-28 06:40:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 06:40:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 06:40:17] Further information can be found at the LHC@home message board.
[2025-11-28 06:40:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 06:40:17] Checking for apptainer binary...
[2025-11-28 06:40:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 06:40:17] Running /usr/bin/apptainer --version
[2025-11-28 06:40:17] apptainer version 1.4.1-1.1
[2025-11-28 06:40:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 06:40:17] thA335
[2025-11-28 06:40:17] apptainer works
[2025-11-28 06:40:17] Set ATHENA_PROC_NUMBER=3
[2025-11-28 06:40:17] Set ATHENA_CORE_NUMBER=3
[2025-11-28 06:40:17] Starting ATLAS job with PandaID=6898271592
[2025-11-28 06:40:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 06:44:36]  *** The last 200 lines of the pilot log: ***
[2025-11-28 06:44:36] ANSI_COLOR="0;31"
[2025-11-28 06:44:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 06:44:36] HOME_URL="https://www.centos.org/"
[2025-11-28 06:44:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 06:44:36] 
[2025-11-28 06:44:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 06:44:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 06:44:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 06:44:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 06:44:36] 
[2025-11-28 06:44:36] 2025-11-28 05:43:44,527 | INFO     | ***************************************
[2025-11-28 06:44:36] 2025-11-28 05:43:45,031 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-28 06:44:36] 2025-11-28 05:43:45,043 | INFO     | sufficient remaining disk space (825745211392 B)
[2025-11-28 06:44:36] 2025-11-28 05:43:45,044 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 06:44:36] 2025-11-28 05:43:45,044 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 06:44:36] 2025-11-28 05:43:45,044 | INFO     | update_server=False
[2025-11-28 06:44:36] 2025-11-28 05:43:45,044 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 06:44:36] 2025-11-28 05:43:45,044 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 06:44:36] 2025-11-28 05:43:45,044 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:44:36] 2025-11-28 05:43:45,366 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 06:44:36] 2025-11-28 05:43:45,366 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 06:44:36] 2025-11-28 05:43:45,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:44:36] 2025-11-28 05:43:45,367 | INFO     | will abort loop
[2025-11-28 06:44:36] 2025-11-28 05:43:45,466 | INFO     | all data control threads have been joined
[2025-11-28 06:44:36] 2025-11-28 05:43:45,841 | INFO     | all payload control threads have been joined
[2025-11-28 06:44:36] 2025-11-28 05:43:46,050 | INFO     | [job] retrieve thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,051 | INFO     | [job] queue monitor thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,371 | INFO     | [job] job monitor thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,387 | INFO     | all job control threads have been joined
[2025-11-28 06:44:36] 2025-11-28 05:43:46,402 | INFO     | [payload] validate_post thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,472 | INFO     | [data] control thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,476 | INFO     | [data] copytool_in thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,814 | INFO     | [job] validate thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,846 | INFO     | [payload] control thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,895 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,937 | INFO     | [payload] failed_post thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:46,950 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:47,050 | INFO     | [data] copytool_out thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:47,338 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:47,393 | INFO     | [job] control thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:43:47,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 06:44:36] 2025-11-28 05:43:51,467 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 06:44:36] 2025-11-28 05:44:14,992 | INFO     | PID=1355177 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 06:44:36] 2025-11-28 05:44:14,992 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 06:44:36] 2025-11-28 05:44:14,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 06:44:36] 2025-11-28 05:44:14,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 06:44:36] 2025-11-28 05:44:30,038 | INFO     | [monitor] cgroup control has ended
[2025-11-28 06:44:36] 2025-11-28 05:44:31,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121634023232)>', '<ExcThread(monitor, started 140120984364800)>']
[2025-11-28 06:44:36] 2025-11-28 05:44:32,082 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 06:44:36] 2025-11-28 05:44:32,082 | INFO     | [monitor] control thread has ended
[2025-11-28 06:44:36] 2025-11-28 05:44:36,345 | INFO     | all workflow threads have been joined
[2025-11-28 06:44:36] 2025-11-28 05:44:36,346 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 06:44:36] 2025-11-28 05:44:36,346 | INFO     | traces error code: 0
[2025-11-28 06:44:36] 2025-11-28 05:44:36,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 06:44:36] 2025-11-28 05:44:36,394 [wrapper] ==== pilot stdout END ====
[2025-11-28 06:44:36] 2025-11-28 05:44:36,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 06:44:36] 2025-11-28 05:44:36,400 [wrapper] pilotpid: 1355177
[2025-11-28 06:44:36] 2025-11-28 05:44:36,403 [wrapper] Pilot exit status: 0
[2025-11-28 06:44:36] 2025-11-28 05:44:36,410 [wrapper] pandaids: 6898271592
[2025-11-28 06:44:36] 2025-11-28 05:44:36,426 [wrapper] cleanup supervisor_pilot 1355183 1355178
[2025-11-28 06:44:36] 2025-11-28 05:44:36,429 [wrapper] Test setup, not cleaning
[2025-11-28 06:44:36] 2025-11-28 05:44:36,431 [wrapper] apfmon messages muted
[2025-11-28 06:44:36] 2025-11-28 05:44:36,434 [wrapper] ==== wrapper stdout END ====
[2025-11-28 06:44:36] 2025-11-28 05:44:36,436 [wrapper] ==== wrapper stderr END ====
[2025-11-28 06:44:36]  *** Error codes and diagnostics ***
[2025-11-28 06:44:36]     "exeErrorCode": 65,
[2025-11-28 06:44:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-28 06:44:36]     "pilotErrorCode": 1305,
[2025-11-28 06:44:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-28 06:44:36]  *** Listing of results directory ***
[2025-11-28 06:44:36] total 404924
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc    576529 Nov 26 16:05 pilot3.tar.gz
[2025-11-28 06:44:36] -rwx------ 1 boinc boinc     36292 Nov 26 16:23 runpilot2-wrapper.sh
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc      5112 Nov 26 16:23 queuedata.json
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc       100 Nov 28 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 06:44:36] -rwxr-xr-x 1 boinc boinc      7986 Nov 28 06:40 run_atlas
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc       105 Nov 28 06:40 job.xml
[2025-11-28 06:44:36] -rw-r--r-- 2 boinc boinc 410448901 Nov 28 06:40 EVNT.47483658._002541.pool.root.1
[2025-11-28 06:44:36] drwxrwx--x 2 boinc boinc      4096 Nov 28 06:40 shared
[2025-11-28 06:44:36] -rw-r--r-- 2 boinc boinc    590104 Nov 28 06:40 input.tar.gz
[2025-11-28 06:44:36] -rw-r--r-- 2 boinc boinc     15847 Nov 28 06:40 start_atlas.sh
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc         0 Nov 28 06:40 boinc_setup_complete
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc      6196 Nov 28 06:40 init_data.xml
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc         0 Nov 28 06:40 boinc_lockfile
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc      2786 Nov 28 06:40 pandaJob.out
[2025-11-28 06:44:36] -rw------- 1 boinc boinc    991858 Nov 28 06:40 agis_schedconf.cvmfs.json
[2025-11-28 06:44:36] -rw------- 1 boinc boinc   1516240 Nov 28 06:40 agis_ddmendpoints.agis.ALL.json
[2025-11-28 06:44:36] drwx------ 5 boinc boinc      4096 Nov 28 06:40 pilot3
[2025-11-28 06:44:36] -rw------- 1 boinc boinc       982 Nov 28 06:41 memory_monitor_summary.json
[2025-11-28 06:44:36] -rw------- 1 boinc boinc     54448 Nov 28 06:41 log.47556161._005238.job.log.tgz.1
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc       522 Nov 28 06:41 boinc_task_state.xml
[2025-11-28 06:44:36] -rw------- 1 boinc boinc        95 Nov 28 06:43 pilot_heartbeat.json
[2025-11-28 06:44:36] -rw------- 1 boinc boinc      8397 Nov 28 06:43 heartbeat.json
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc      8192 Nov 28 06:44 boinc_mmap_file
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc        22 Nov 28 06:44 wrapper_checkpoint.txt
[2025-11-28 06:44:36] -rw------- 1 boinc boinc      4938 Nov 28 06:44 pilotlog.txt
[2025-11-28 06:44:36] -rw------- 1 boinc boinc     92492 Nov 28 06:44 log.47556161._005238.job.log.1
[2025-11-28 06:44:36] -rw------- 1 boinc boinc       186 Nov 28 06:44 output.list
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc       620 Nov 28 06:44 runtime_log
[2025-11-28 06:44:36] -rw------- 1 boinc boinc    163840 Nov 28 06:44 result.tar.gz
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc      8744 Nov 28 06:44 runtime_log.err
[2025-11-28 06:44:36] -rw------- 1 boinc boinc       649 Nov 28 06:44 WiJLDm3XWi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmL4MKDmFSSyRn.diag
[2025-11-28 06:44:36] -rw-r--r-- 1 boinc boinc      9047 Nov 28 06:44 stderr.txt
[2025-11-28 06:44:36] No HITS result produced
[2025-11-28 06:44:36]  *** Contents of shared directory: ***
[2025-11-28 06:44:36] total 401592
[2025-11-28 06:44:36] -rw-r--r-- 2 boinc boinc 410448901 Nov 28 06:40 ATLAS.root_0
[2025-11-28 06:44:36] -rw-r--r-- 2 boinc boinc    590104 Nov 28 06:40 input.tar.gz
[2025-11-28 06:44:36] -rw-r--r-- 2 boinc boinc     15847 Nov 28 06:40 start_atlas.sh
[2025-11-28 06:44:36] -rw------- 1 boinc boinc    163840 Nov 28 06:44 result.tar.gz
06:44:38 (1351444): run_atlas exited; CPU time 31.499501
06:44:38 (1351444): called boinc_finish(0)

</stderr_txt>
]]>

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