Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:14:36 (29260): wrapper (7.7.26015): starting
00:14:36 (29260): wrapper: running run_atlas (--nthreads 12)
[2025-11-28 00:14:36] Arguments: --nthreads 12
[2025-11-28 00:14:36] Threads: 12
[2025-11-28 00:14:36] Checking for CVMFS
[2025-11-28 00:14:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 00:14:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 00:14:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 00:14:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 00:14:36] 2.11.2.0 2947 290082 92600 153398 3 80 20214750 20275201 1 130560 1 130695962 99.971 16543373 12856 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 00:14:36] CVMFS is ok
[2025-11-28 00:14:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 00:14:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 00:14:36] Further information can be found at the LHC@home message board.
[2025-11-28 00:14:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 00:14:36] Checking for apptainer binary...
[2025-11-28 00:14:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 00:14:36] Running /usr/bin/apptainer --version
[2025-11-28 00:14:36] apptainer version 1.3.2-1.el7
[2025-11-28 00:14:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 00:14:38] c-205-18.aglt2.org
[2025-11-28 00:14:38] apptainer works
[2025-11-28 00:14:38] Set ATHENA_PROC_NUMBER=12
[2025-11-28 00:14:38] Set ATHENA_CORE_NUMBER=12
[2025-11-28 00:14:38] Starting ATLAS job with PandaID=6898987344
[2025-11-28 00:14:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 07:31:42]  *** The last 200 lines of the pilot log: ***
[2025-11-28 07:31:42] 2025-11-28 12:31:13,416 | INFO     | fitting pss+swap vs Time
[2025-11-28 07:31:42] 2025-11-28 12:31:13,417 | INFO     | sum of square deviations: 24482118160.279648
[2025-11-28 07:31:42] 2025-11-28 12:31:13,421 | INFO     | sum of deviations: 338381187689.4823
[2025-11-28 07:31:42] 2025-11-28 12:31:13,421 | INFO     | mean x: 1764319976.2587411
[2025-11-28 07:31:42] 2025-11-28 12:31:13,421 | INFO     | mean y: 3402028.6713286713
[2025-11-28 07:31:42] 2025-11-28 12:31:13,421 | INFO     | intersect: -24382261218.36418
[2025-11-28 07:31:42] 2025-11-28 12:31:13,422 | INFO     | chi2: 7.495576142983585
[2025-11-28 07:31:42] 2025-11-28 12:31:13,422 | INFO     | sum of square deviations: 23636071034.941055
[2025-11-28 07:31:42] 2025-11-28 12:31:13,426 | INFO     | sum of deviations: 517290788588.7965
[2025-11-28 07:31:42] 2025-11-28 12:31:13,426 | INFO     | mean x: 1764319823.7617924
[2025-11-28 07:31:42] 2025-11-28 12:31:13,426 | INFO     | mean y: 3434248.7405660376
[2025-11-28 07:31:42] 2025-11-28 12:31:13,426 | INFO     | intersect: -38609852689.15174
[2025-11-28 07:31:42] 2025-11-28 12:31:13,427 | INFO     | chi2: 3.8711875832284512
[2025-11-28 07:31:42] 2025-11-28 12:31:13,427 | INFO     | current chi2=3.8711875832284512 (change=48.35370211198281 %)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,428 | INFO     | sum of square deviations: 22809745209.594303
[2025-11-28 07:31:42] 2025-11-28 12:31:13,431 | INFO     | sum of deviations: 608359157696.43
[2025-11-28 07:31:42] 2025-11-28 12:31:13,432 | INFO     | mean x: 1764319671.2649164
[2025-11-28 07:31:42] 2025-11-28 12:31:13,432 | INFO     | mean y: 3451032.1312649166
[2025-11-28 07:31:42] 2025-11-28 12:31:13,432 | INFO     | intersect: -47052753202.29813
[2025-11-28 07:31:42] 2025-11-28 12:31:13,432 | INFO     | chi2: 2.784603200367579
[2025-11-28 07:31:42] 2025-11-28 12:31:13,432 | INFO     | current chi2=2.784603200367579 (change=28.068502481470926 %)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,433 | INFO     | sum of square deviations: 22002908121.73915
[2025-11-28 07:31:42] 2025-11-28 12:31:13,436 | INFO     | sum of deviations: 607393259356.3188
[2025-11-28 07:31:42] 2025-11-28 12:31:13,437 | INFO     | mean x: 1764319518.768116
[2025-11-28 07:31:42] 2025-11-28 12:31:13,437 | INFO     | mean y: 3450829.3574879225
[2025-11-28 07:31:42] 2025-11-28 12:31:13,437 | INFO     | intersect: -48700828492.32673
[2025-11-28 07:31:42] 2025-11-28 12:31:13,437 | INFO     | chi2: 2.726786274905016
[2025-11-28 07:31:42] 2025-11-28 12:31:13,437 | INFO     | current chi2=2.726786274905016 (change=2.076307513218805 %)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,438 | INFO     | right removable region: 413
[2025-11-28 07:31:42] 2025-11-28 12:31:13,438 | INFO     | sum of square deviations: 23636029249.462276
[2025-11-28 07:31:42] 2025-11-28 12:31:13,442 | INFO     | sum of deviations: 188937444792.4382
[2025-11-28 07:31:42] 2025-11-28 12:31:13,442 | INFO     | mean x: 1764320128.759434
[2025-11-28 07:31:42] 2025-11-28 12:31:13,442 | INFO     | mean y: 3428896.327830189
[2025-11-28 07:31:42] 2025-11-28 12:31:13,442 | INFO     | intersect: -14099876418.005234
[2025-11-28 07:31:42] 2025-11-28 12:31:13,443 | INFO     | chi2: 5.004916687720582
[2025-11-28 07:31:42] 2025-11-28 12:31:13,443 | INFO     | current chi2=5.004916687720582 (change=33.22839242443617 %)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,443 | INFO     | sum of square deviations: 22809661760.644356
[2025-11-28 07:31:42] 2025-11-28 12:31:13,447 | INFO     | sum of deviations: 149207954446.94998
[2025-11-28 07:31:42] 2025-11-28 12:31:13,447 | INFO     | mean x: 1764320281.2601433
[2025-11-28 07:31:42] 2025-11-28 12:31:13,447 | INFO     | mean y: 3436221.8353221957
[2025-11-28 07:31:42] 2025-11-28 12:31:13,448 | INFO     | intersect: -11537752898.74622
[2025-11-28 07:31:42] 2025-11-28 12:31:13,448 | INFO     | chi2: 4.909960841171782
[2025-11-28 07:31:42] 2025-11-28 12:31:13,448 | INFO     | current chi2=4.909960841171782 (change=1.897251292549423 %)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,448 | INFO     | left removable region: 20
[2025-11-28 07:31:42] 2025-11-28 12:31:13,449 | INFO     | sum of square deviations: 18821590215.867634
[2025-11-28 07:31:42] 2025-11-28 12:31:13,452 | INFO     | sum of deviations: 362715135981.88574
[2025-11-28 07:31:42] 2025-11-28 12:31:13,452 | INFO     | mean x: 1764320098.2722647
[2025-11-28 07:31:42] 2025-11-28 12:31:13,453 | INFO     | mean y: 3498090.8702290077
[2025-11-28 07:31:42] 2025-11-28 12:31:13,453 | INFO     | intersect: -33997114876.512794
[2025-11-28 07:31:42] 2025-11-28 12:31:13,453 | INFO     | chi2: 0.04696357637017159
[2025-11-28 07:31:42] 2025-11-28 12:31:13,453 | INFO     | current memory leak: 19.27 B/s (using 393 data points, chi2=0.05)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,454 | INFO     | could have reported an average CPU frequency of 2391 MHz (18 samples)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,454 | INFO     | ..............................
[2025-11-28 07:31:42] 2025-11-28 12:31:13,454 | INFO     | . Timing measurements:
[2025-11-28 07:31:42] 2025-11-28 12:31:13,454 | INFO     | . get job = 0 s
[2025-11-28 07:31:42] 2025-11-28 12:31:13,454 | INFO     | . initial setup = 2 s
[2025-11-28 07:31:42] 2025-11-28 12:31:13,454 | INFO     | . payload setup = 7 s
[2025-11-28 07:31:42] 2025-11-28 12:31:13,454 | INFO     | . stage-in = 0 s
[2025-11-28 07:31:42] 2025-11-28 12:31:13,455 | INFO     | . payload execution = 26140 s
[2025-11-28 07:31:42] 2025-11-28 12:31:13,455 | INFO     | . stage-out = 3 s
[2025-11-28 07:31:42] 2025-11-28 12:31:13,455 | INFO     | . log creation = 0 s
[2025-11-28 07:31:42] 2025-11-28 12:31:13,455 | INFO     | ..............................
[2025-11-28 07:31:42] 2025-11-28 12:31:13,536 | INFO     | 
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | job summary report
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | --------------------------------------------------
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | PanDA job id: 6898987344
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | task id: 47556161
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | errors: (none)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | pilot state: finished 
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | transexitcode: 0
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | exeerrorcode: 0
[2025-11-28 07:31:42] 2025-11-28 12:31:13,537 | INFO     | exeerrordiag: 
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | exitcode: 0
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | exitmsg: OK
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | cpuconsumptiontime: 298715 s
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | nevents: 1000
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | neventsw: 0
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | pid: 7194
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | pgrp: 7194
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | corecount: 12
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | event service: False
[2025-11-28 07:31:42] 2025-11-28 12:31:13,538 | INFO     | sizes: {0: 2284144, 1: 2284343, 5: 2284605, 11: 2284661, 26151: 2322037, 26155: 2331031, 26156: 2331215, 26165: 2331461}
[2025-11-28 07:31:42] 2025-11-28 12:31:13,539 | INFO     | --------------------------------------------------
[2025-11-28 07:31:42] 2025-11-28 12:31:13,539 | INFO     | 
[2025-11-28 07:31:42] 2025-11-28 12:31:13,539 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 07:31:42] 2025-11-28 12:31:13,562 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,565 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 07:31:42] 2025-11-28 12:31:13,565 | INFO     | job 6898987344 has completed (purged errors)
[2025-11-28 07:31:42] 2025-11-28 12:31:13,566 | INFO     | overall cleanup function is called
[2025-11-28 07:31:42] 2025-11-28 12:31:14,580 | INFO     | --- collectZombieJob: --- 10, [7194]
[2025-11-28 07:31:42] 2025-11-28 12:31:14,580 | INFO     | zombie collector waiting for pid 7194
[2025-11-28 07:31:42] 2025-11-28 12:31:14,581 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 07:31:42] 2025-11-28 12:31:14,581 | INFO     | collected zombie processes
[2025-11-28 07:31:42] 2025-11-28 12:31:14,581 | INFO     | will attempt to kill all subprocesses of pid=7194
[2025-11-28 07:31:42] 2025-11-28 12:31:14,672 | INFO     | process IDs to be killed: [7194] (in reverse order)
[2025-11-28 07:31:42] 2025-11-28 12:31:14,725 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 07:31:42] 2025-11-28 12:31:14,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 07:31:42] 2025-11-28 12:31:14,729 | INFO     | did not find any defunct processes belonging to 7194
[2025-11-28 07:31:42] 2025-11-28 12:31:14,731 | INFO     | did not find any defunct processes belonging to 7194
[2025-11-28 07:31:42] 2025-11-28 12:31:14,733 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 07:31:42] 2025-11-28 12:31:14,733 | INFO     | ready for new job
[2025-11-28 07:31:42] 2025-11-28 12:31:14,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 07:31:42] 2025-11-28 12:31:14,735 | INFO     | ***************************************
[2025-11-28 07:31:42] 2025-11-28 12:31:14,735 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 07:31:42] 2025-11-28 12:31:14,735 | INFO     | ***************************************
[2025-11-28 07:31:42] 2025-11-28 12:31:14,735 | INFO     | 
[2025-11-28 07:31:42] 2025-11-28 12:31:14,736 | INFO     | architecture information:
[2025-11-28 07:31:42] 2025-11-28 12:31:14,736 | INFO     | executing command: cat /etc/os-release
[2025-11-28 07:31:42] 2025-11-28 12:31:14,751 | INFO     | cat /etc/os-release:
[2025-11-28 07:31:42] NAME="CentOS Linux"
[2025-11-28 07:31:42] VERSION="7 (Core)"
[2025-11-28 07:31:42] ID="centos"
[2025-11-28 07:31:42] ID_LIKE="rhel fedora"
[2025-11-28 07:31:42] VERSION_ID="7"
[2025-11-28 07:31:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 07:31:42] ANSI_COLOR="0;31"
[2025-11-28 07:31:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 07:31:42] HOME_URL="https://www.centos.org/"
[2025-11-28 07:31:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 07:31:42] 
[2025-11-28 07:31:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 07:31:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 07:31:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 07:31:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 07:31:42] 
[2025-11-28 07:31:42] 2025-11-28 12:31:14,751 | INFO     | ***************************************
[2025-11-28 07:31:42] 2025-11-28 12:31:15,254 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 07:31:42] 2025-11-28 12:31:15,272 | INFO     | sufficient remaining disk space (28249686016 B)
[2025-11-28 07:31:42] 2025-11-28 12:31:15,272 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 07:31:42] 2025-11-28 12:31:15,273 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 07:31:42] 2025-11-28 12:31:15,273 | INFO     | update_server=False
[2025-11-28 07:31:42] 2025-11-28 12:31:15,273 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 07:31:42] 2025-11-28 12:31:15,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:31:42] 2025-11-28 12:31:15,273 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-28 07:31:42] 2025-11-28 12:31:15,274 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 07:31:42] 2025-11-28 12:31:15,274 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 07:31:42] 2025-11-28 12:31:15,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 07:31:42] 2025-11-28 12:31:15,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 07:31:42] 2025-11-28 12:31:15,398 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 07:31:42] 2025-11-28 12:31:15,399 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 07:31:42] 2025-11-28 12:31:15,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:31:42] 2025-11-28 12:31:15,399 | INFO     | will abort loop
[2025-11-28 07:31:42] 2025-11-28 12:31:15,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 07:31:42] 2025-11-28 12:31:16,278 | INFO     | [job] retrieve thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:16,279 | INFO     | [job] queue monitor thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:16,290 | INFO     | all data control threads have been joined
[2025-11-28 07:31:42] 2025-11-28 12:31:16,405 | INFO     | [job] job monitor thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:16,461 | INFO     | [payload] failed_post thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:16,476 | INFO     | all job control threads have been joined
[2025-11-28 07:31:42] 2025-11-28 12:31:16,759 | INFO     | all payload control threads have been joined
[2025-11-28 07:31:42] 2025-11-28 12:31:16,935 | INFO     | [job] validate thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:17,136 | INFO     | [payload] validate_post thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:17,280 | INFO     | [data] copytool_out thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:17,296 | INFO     | [data] control thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:17,464 | INFO     | [data] copytool_in thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:17,464 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:17,481 | INFO     | [job] control thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:17,516 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:17,689 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:17,764 | INFO     | [payload] control thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:19,751 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:25,605 | INFO     | job.realtimelogging is not enabled
[2025-11-28 07:31:42] 2025-11-28 12:31:26,610 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 07:31:42] 2025-11-28 12:31:35,119 | INFO     | [monitor] cgroup control has ended
[2025-11-28 07:31:42] 2025-11-28 12:31:36,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185625941824)>', '<ExcThread(monitor, started 140185048184576)>']
[2025-11-28 07:31:42] 2025-11-28 12:31:37,380 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 07:31:42] 2025-11-28 12:31:37,380 | INFO     | [monitor] control thread has ended
[2025-11-28 07:31:42] 2025-11-28 12:31:41,955 | INFO     | all workflow threads have been joined
[2025-11-28 07:31:42] 2025-11-28 12:31:41,955 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 07:31:42] 2025-11-28 12:31:41,955 | INFO     | traces error code: 0
[2025-11-28 07:31:42] 2025-11-28 12:31:41,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 07:31:42] 2025-11-28 12:31:42,048 [wrapper] ==== pilot stdout END ====
[2025-11-28 07:31:42] 2025-11-28 12:31:42,051 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 07:31:42] 2025-11-28 12:31:42,055 [wrapper] pilotpid: 495
[2025-11-28 07:31:42] 2025-11-28 12:31:42,059 [wrapper] Pilot exit status: 0
[2025-11-28 07:31:42] 2025-11-28 12:31:42,073 [wrapper] pandaids: 6898987344
[2025-11-28 07:31:42] 2025-11-28 12:31:42,114 [wrapper] cleanup supervisor_pilot  4588 496
[2025-11-28 07:31:42] 2025-11-28 12:31:42,119 [wrapper] Test setup, not cleaning
[2025-11-28 07:31:42] 2025-11-28 12:31:42,123 [wrapper] apfmon messages muted
[2025-11-28 07:31:42] 2025-11-28 12:31:42,127 [wrapper] ==== wrapper stdout END ====
[2025-11-28 07:31:42] 2025-11-28 12:31:42,131 [wrapper] ==== wrapper stderr END ====
[2025-11-28 07:31:42]  *** Error codes and diagnostics ***
[2025-11-28 07:31:42]     "exeErrorCode": 0,
[2025-11-28 07:31:42]     "exeErrorDiag": "",
[2025-11-28 07:31:42]     "pilotErrorCode": 0,
[2025-11-28 07:31:42]     "pilotErrorDiag": "",
[2025-11-28 07:31:42]  *** Listing of results directory ***
[2025-11-28 07:31:42] total 1309232
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 19:01 pilot3.tar.gz
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 19:13 queuedata.json
[2025-11-28 07:31:42] -rwx------ 1 boincer umatlas     36292 Nov 26 19:15 runpilot2-wrapper.sh
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas       100 Nov 28 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 07:31:42] -rwxr-xr-x 1 boincer umatlas      7986 Nov 28 00:14 run_atlas
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas       105 Nov 28 00:14 job.xml
[2025-11-28 07:31:42] -rw-r--r-- 2 boincer umatlas 409650127 Nov 28 00:14 EVNT.47483658._002753.pool.root.1
[2025-11-28 07:31:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 00:14 start_atlas.sh
[2025-11-28 07:31:42] drwxrwx--x 2 boincer umatlas      4096 Nov 28 00:14 shared
[2025-11-28 07:31:42] -rw-r--r-- 2 boincer umatlas    590106 Nov 28 00:14 input.tar.gz
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas         0 Nov 28 00:14 boinc_lockfile
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas      2786 Nov 28 00:14 pandaJob.out
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas        57 Nov 28 00:14 setup.sh.local
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas    991858 Nov 28 00:14 agis_schedconf.cvmfs.json
[2025-11-28 07:31:42] drwx------ 5 boincer umatlas      4096 Nov 28 00:14 pilot3
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas       533 Nov 28 07:18 boinc_task_state.xml
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas      5955 Nov 28 07:27 init_data.xml
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas 915364075 Nov 28 07:30 HITS.47556161._007352.pool.root.1
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas      1060 Nov 28 07:30 memory_monitor_summary.json
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas   1516240 Nov 28 07:31 agis_ddmendpoints.agis.ALL.json
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas   2182412 Nov 28 07:31 log.47556161._007352.job.log.tgz.1
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas        95 Nov 28 07:31 pilot_heartbeat.json
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas      8666 Nov 28 07:31 heartbeat.json
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas        29 Nov 28 07:31 wrapper_checkpoint.txt
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 07:31 boinc_mmap_file
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas      4810 Nov 28 07:31 pilotlog.txt
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas   3674604 Nov 28 07:31 log.47556161._007352.job.log.1
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas       353 Nov 28 07:31 output.list
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas       620 Nov 28 07:31 runtime_log
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas   5877760 Nov 28 07:31 result.tar.gz
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas       670 Nov 28 07:31 x8pNDmSqei8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdJKKDm8bCHgm.diag
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas      9345 Nov 28 07:31 runtime_log.err
[2025-11-28 07:31:42] -rw-r--r-- 1 boincer umatlas     21032 Nov 28 07:31 stderr.txt
[2025-11-28 07:31:42] HITS file was successfully produced:
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas 915364075 Nov 28 07:30 shared/HITS.pool.root.1
[2025-11-28 07:31:42]  *** Contents of shared directory: ***
[2025-11-28 07:31:42] total 1300308
[2025-11-28 07:31:42] -rw-r--r-- 2 boincer umatlas 409650127 Nov 28 00:14 ATLAS.root_0
[2025-11-28 07:31:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 28 00:14 start_atlas.sh
[2025-11-28 07:31:42] -rw-r--r-- 2 boincer umatlas    590106 Nov 28 00:14 input.tar.gz
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas 915364075 Nov 28 07:30 HITS.pool.root.1
[2025-11-28 07:31:42] -rw------- 1 boincer umatlas   5877760 Nov 28 07:31 result.tar.gz
07:31:43 (29260): run_atlas exited; CPU time 292214.512000
07:31:43 (29260): called boinc_finish(0)

</stderr_txt>
]]>

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