Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:37 (1025998): wrapper (7.7.26015): starting
00:10:37 (1025998): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 00:10:37] Arguments: --nthreads 8
[2025-11-28 00:10:37] Threads: 8
[2025-11-28 00:10:37] Checking for CVMFS
[2025-11-28 00:10:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 00:10:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 00:10:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 00:10:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 00:10:39] 2.13.2.0 7884 39092 199208 153398 2 84 39778150 40960001 33088 16776704 0 399622445 99.726 288157954 47449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 00:10:39] CVMFS is ok
[2025-11-28 00:10:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 00:10:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 00:10:39] Further information can be found at the LHC@home message board.
[2025-11-28 00:10:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 00:10:39] Checking for apptainer binary...
[2025-11-28 00:10:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 00:10:39] Running /usr/bin/apptainer --version
[2025-11-28 00:10:39] apptainer version 1.4.4-1.el9
[2025-11-28 00:10:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 00:10:39] c-208-38.aglt2.org
[2025-11-28 00:10:39] apptainer works
[2025-11-28 00:10:39] Set ATHENA_PROC_NUMBER=8
[2025-11-28 00:10:39] Set ATHENA_CORE_NUMBER=8
[2025-11-28 00:10:39] Starting ATLAS job with PandaID=6893834589
[2025-11-28 00:10:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 11:02:54]  *** The last 200 lines of the pilot log: ***
[2025-11-28 11:02:54] 2025-11-28 16:01:54,764 | INFO     | fitting pss+swap vs Time
[2025-11-28 11:02:54] 2025-11-28 16:01:54,765 | INFO     | sum of square deviations: 79762252388.24364
[2025-11-28 11:02:54] 2025-11-28 16:01:54,770 | INFO     | sum of deviations: 1378096342055.9788
[2025-11-28 11:02:54] 2025-11-28 16:01:54,770 | INFO     | mean x: 1764326288.413522
[2025-11-28 11:02:54] 2025-11-28 16:01:54,770 | INFO     | mean y: 2791498.863207547
[2025-11-28 11:02:54] 2025-11-28 16:01:54,770 | INFO     | intersect: -30480445012.825977
[2025-11-28 11:02:54] 2025-11-28 16:01:54,770 | INFO     | chi2: 10.338593484898775
[2025-11-28 11:02:54] 2025-11-28 16:01:54,771 | INFO     | sum of square deviations: 77895926750.64673
[2025-11-28 11:02:54] 2025-11-28 16:01:54,775 | INFO     | sum of deviations: 1483287089294.0654
[2025-11-28 11:02:54] 2025-11-28 16:01:54,775 | INFO     | mean x: 1764326135.9271
[2025-11-28 11:02:54] 2025-11-28 16:01:54,775 | INFO     | mean y: 2800061.6101426305
[2025-11-28 11:02:54] 2025-11-28 16:01:54,775 | INFO     | intersect: -33593336320.489277
[2025-11-28 11:02:54] 2025-11-28 16:01:54,776 | INFO     | chi2: 8.91406140312407
[2025-11-28 11:02:54] 2025-11-28 16:01:54,776 | INFO     | current chi2=8.91406140312407 (change=13.77878029400682 %)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,776 | INFO     | right removable region: 630
[2025-11-28 11:02:54] 2025-11-28 16:01:54,776 | INFO     | sum of square deviations: 77895222929.79056
[2025-11-28 11:02:54] 2025-11-28 16:01:54,781 | INFO     | sum of deviations: 1129153160526.2761
[2025-11-28 11:02:54] 2025-11-28 16:01:54,781 | INFO     | mean x: 1764326440.9286847
[2025-11-28 11:02:54] 2025-11-28 16:01:54,781 | INFO     | mean y: 2811828.117274168
[2025-11-28 11:02:54] 2025-11-28 16:01:54,781 | INFO     | intersect: -25572502062.05965
[2025-11-28 11:02:54] 2025-11-28 16:01:54,781 | INFO     | chi2: 5.922706713359842
[2025-11-28 11:02:54] 2025-11-28 16:01:54,781 | INFO     | current chi2=5.922706713359842 (change=42.71264537085306 %)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,782 | INFO     | sum of square deviations: 76057542858.54318
[2025-11-28 11:02:54] 2025-11-28 16:01:54,786 | INFO     | sum of deviations: 904541369380.9976
[2025-11-28 11:02:54] 2025-11-28 16:01:54,786 | INFO     | mean x: 1764326593.4440894
[2025-11-28 11:02:54] 2025-11-28 16:01:54,786 | INFO     | mean y: 2830469.485623003
[2025-11-28 11:02:54] 2025-11-28 16:01:54,786 | INFO     | intersect: -20980050818.664833
[2025-11-28 11:02:54] 2025-11-28 16:01:54,787 | INFO     | chi2: 2.521480499765537
[2025-11-28 11:02:54] 2025-11-28 16:01:54,787 | INFO     | current chi2=2.521480499765537 (change=57.42688905939177 %)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,787 | INFO     | sum of square deviations: 74249093688.73755
[2025-11-28 11:02:54] 2025-11-28 16:01:54,792 | INFO     | sum of deviations: 789263681047.6632
[2025-11-28 11:02:54] 2025-11-28 16:01:54,792 | INFO     | mean x: 1764326745.9549115
[2025-11-28 11:02:54] 2025-11-28 16:01:54,792 | INFO     | mean y: 2840173.880837359
[2025-11-28 11:02:54] 2025-11-28 16:01:54,792 | INFO     | intersect: -18751853693.775658
[2025-11-28 11:02:54] 2025-11-28 16:01:54,792 | INFO     | chi2: 1.6158470500955535
[2025-11-28 11:02:54] 2025-11-28 16:01:54,792 | INFO     | current chi2=1.6158470500955535 (change=35.91673422634817 %)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,793 | INFO     | sum of square deviations: 72470210597.53133
[2025-11-28 11:02:54] 2025-11-28 16:01:54,797 | INFO     | sum of deviations: 744815106085.884
[2025-11-28 11:02:54] 2025-11-28 16:01:54,797 | INFO     | mean x: 1764326898.4366884
[2025-11-28 11:02:54] 2025-11-28 16:01:54,797 | INFO     | mean y: 2843982.7662337665
[2025-11-28 11:02:54] 2025-11-28 16:01:54,797 | INFO     | intersect: -18130086985.617966
[2025-11-28 11:02:54] 2025-11-28 16:01:54,797 | INFO     | chi2: 1.5673596524985802
[2025-11-28 11:02:54] 2025-11-28 16:01:54,798 | INFO     | current chi2=1.5673596524985802 (change=3.000741783952013 %)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,798 | INFO     | left removable region: 40
[2025-11-28 11:02:54] 2025-11-28 16:01:54,798 | INFO     | sum of square deviations: 63675844396.3728
[2025-11-28 11:02:54] 2025-11-28 16:01:54,802 | INFO     | sum of deviations: 730250736455.9655
[2025-11-28 11:02:54] 2025-11-28 16:01:54,802 | INFO     | mean x: 1764327325.4067798
[2025-11-28 11:02:54] 2025-11-28 16:01:54,802 | INFO     | mean y: 2863738.308474576
[2025-11-28 11:02:54] 2025-11-28 16:01:54,802 | INFO     | intersect: -20230889593.764755
[2025-11-28 11:02:54] 2025-11-28 16:01:54,803 | INFO     | chi2: 0.051505891946080865
[2025-11-28 11:02:54] 2025-11-28 16:01:54,803 | INFO     | current memory leak: 11.47 B/s (using 590 data points, chi2=0.05)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,803 | INFO     | could have reported an average CPU frequency of 3749 MHz (25 samples)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,803 | INFO     | ..............................
[2025-11-28 11:02:54] 2025-11-28 16:01:54,803 | INFO     | . Timing measurements:
[2025-11-28 11:02:54] 2025-11-28 16:01:54,803 | INFO     | . get job = 0 s
[2025-11-28 11:02:54] 2025-11-28 16:01:54,804 | INFO     | . initial setup = 5 s
[2025-11-28 11:02:54] 2025-11-28 16:01:54,804 | INFO     | . payload setup = 62 s
[2025-11-28 11:02:54] 2025-11-28 16:01:54,804 | INFO     | . stage-in = 0 s
[2025-11-28 11:02:54] 2025-11-28 16:01:54,804 | INFO     | . payload execution = 38829 s
[2025-11-28 11:02:54] 2025-11-28 16:01:54,804 | INFO     | . stage-out = 3 s
[2025-11-28 11:02:54] 2025-11-28 16:01:54,804 | INFO     | . log creation = 0 s
[2025-11-28 11:02:54] 2025-11-28 16:01:54,804 | INFO     | ..............................
[2025-11-28 11:02:54] 2025-11-28 16:01:54,852 | INFO     | 
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | job summary report
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | --------------------------------------------------
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | PanDA job id: 6893834589
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | task id: 47523449
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | errors: (none)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | pilot state: finished 
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | transexitcode: 0
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | exeerrorcode: 0
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | exeerrordiag: 
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | exitcode: 0
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | exitmsg: OK
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | cpuconsumptiontime: 140171 s
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | nevents: 1000
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | neventsw: 0
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | pid: 1078747
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | pgrp: 1078747
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | corecount: 8
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | event service: False
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | sizes: {0: 2284312, 11: 2284312, 22: 2284340, 32: 2284368, 37: 2284658, 43: 2284686, 38895: 2328128, 38899: 2337124, 38901: 2337180, 38907: 2337490}
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | --------------------------------------------------
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | 
[2025-11-28 11:02:54] 2025-11-28 16:01:54,853 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,872 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 11:02:54] 2025-11-28 16:01:54,873 | INFO     | job 6893834589 has completed (purged errors)
[2025-11-28 11:02:54] 2025-11-28 16:01:54,873 | INFO     | overall cleanup function is called
[2025-11-28 11:02:54] 2025-11-28 16:01:55,885 | INFO     | --- collectZombieJob: --- 10, [1078747]
[2025-11-28 11:02:54] 2025-11-28 16:01:55,885 | INFO     | zombie collector waiting for pid 1078747
[2025-11-28 11:02:54] 2025-11-28 16:01:55,886 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 11:02:54] 2025-11-28 16:01:55,886 | INFO     | collected zombie processes
[2025-11-28 11:02:54] 2025-11-28 16:01:55,886 | INFO     | will attempt to kill all subprocesses of pid=1078747
[2025-11-28 11:02:54] 2025-11-28 16:01:56,257 | INFO     | process IDs to be killed: [1078747] (in reverse order)
[2025-11-28 11:02:54] 2025-11-28 16:01:56,390 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 11:02:54] 2025-11-28 16:01:56,390 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 11:02:54] 2025-11-28 16:01:56,410 | INFO     | did not find any defunct processes belonging to 1078747
[2025-11-28 11:02:54] 2025-11-28 16:01:56,430 | INFO     | did not find any defunct processes belonging to 1078747
[2025-11-28 11:02:54] 2025-11-28 16:01:56,431 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 11:02:54] 2025-11-28 16:01:56,432 | INFO     | ready for new job
[2025-11-28 11:02:54] 2025-11-28 16:01:56,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 11:02:54] 2025-11-28 16:01:56,434 | INFO     | ***************************************
[2025-11-28 11:02:54] 2025-11-28 16:01:56,434 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 11:02:54] 2025-11-28 16:01:56,434 | INFO     | ***************************************
[2025-11-28 11:02:54] 2025-11-28 16:01:56,434 | INFO     | 
[2025-11-28 11:02:54] 2025-11-28 16:01:56,439 | INFO     | architecture information:
[2025-11-28 11:02:54] 2025-11-28 16:01:56,439 | INFO     | executing command: cat /etc/os-release
[2025-11-28 11:02:54] 2025-11-28 16:01:56,453 | INFO     | cat /etc/os-release:
[2025-11-28 11:02:54] NAME="CentOS Linux"
[2025-11-28 11:02:54] VERSION="7 (Core)"
[2025-11-28 11:02:54] ID="centos"
[2025-11-28 11:02:54] ID_LIKE="rhel fedora"
[2025-11-28 11:02:54] VERSION_ID="7"
[2025-11-28 11:02:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 11:02:54] ANSI_COLOR="0;31"
[2025-11-28 11:02:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 11:02:54] HOME_URL="https://www.centos.org/"
[2025-11-28 11:02:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 11:02:54] 
[2025-11-28 11:02:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 11:02:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 11:02:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 11:02:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 11:02:54] 
[2025-11-28 11:02:54] 2025-11-28 16:01:56,453 | INFO     | ***************************************
[2025-11-28 11:02:54] 2025-11-28 16:01:56,955 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-11-28 11:02:54] 2025-11-28 16:01:56,970 | INFO     | sufficient remaining disk space (160374456320 B)
[2025-11-28 11:02:54] 2025-11-28 16:01:56,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 11:02:54] 2025-11-28 16:01:56,970 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 11:02:54] 2025-11-28 16:01:56,970 | INFO     | update_server=False
[2025-11-28 11:02:54] 2025-11-28 16:01:56,970 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 11:02:54] 2025-11-28 16:01:57,028 | INFO     | all payload control threads have been joined
[2025-11-28 11:02:54] 2025-11-28 16:01:57,043 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 11:02:54] 2025-11-28 16:01:57,044 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 11:02:54] 2025-11-28 16:01:57,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:02:54] 2025-11-28 16:01:57,044 | INFO     | will abort loop
[2025-11-28 11:02:54] 2025-11-28 16:01:57,044 | INFO     | all job control threads have been joined
[2025-11-28 11:02:54] 2025-11-28 16:01:57,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 11:02:54] 2025-11-28 16:01:57,586 | INFO     | all data control threads have been joined
[2025-11-28 11:02:54] 2025-11-28 16:01:57,975 | INFO     | [job] retrieve thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:58,034 | INFO     | [payload] control thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:58,049 | INFO     | [job] job monitor thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:58,050 | INFO     | [job] control thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:58,204 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:58,415 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:58,422 | INFO     | [job] validate thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:58,592 | INFO     | [data] control thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:58,759 | INFO     | [payload] validate_post thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:59,043 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:59,083 | INFO     | [data] copytool_in thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:59,291 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:59,310 | INFO     | [data] copytool_out thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:59,346 | INFO     | [payload] failed_post thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:01:59,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 11:02:54] 2025-11-28 16:01:59,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:02:54] 2025-11-28 16:02:00,868 | INFO     | [job] queue monitor thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:02:03,520 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 11:02:54] 2025-11-28 16:02:10,920 | INFO     | [monitor] cgroup control has ended
[2025-11-28 11:02:54] 2025-11-28 16:02:12,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438483756864)>', '<ExcThread(monitor, started 140437771773696)>']
[2025-11-28 11:02:54] 2025-11-28 16:02:17,546 | INFO     | all workflow threads have been joined
[2025-11-28 11:02:54] 2025-11-28 16:02:17,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 11:02:54] 2025-11-28 16:02:17,547 | INFO     | traces error code: 0
[2025-11-28 11:02:54] 2025-11-28 16:02:17,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 11:02:54] 2025-11-28 16:02:26,892 | INFO     | PID=1040690 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 11:02:54] 2025-11-28 16:02:26,892 | INFO     | .. there are 31 such processes running
[2025-11-28 11:02:54] 2025-11-28 16:02:26,892 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 11:02:54] 2025-11-28 16:02:26,892 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 11:02:54] 2025-11-28 16:02:26,892 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 11:02:54] 2025-11-28 16:02:26,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 11:02:54] 2025-11-28 16:02:26,893 | INFO     | [monitor] control thread has ended
[2025-11-28 11:02:54] 2025-11-28 16:02:27,003 [wrapper] ==== pilot stdout END ====
[2025-11-28 11:02:54] 2025-11-28 16:02:27,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 11:02:54] 2025-11-28 16:02:27,009 [wrapper] pilotpid: 1040690
[2025-11-28 11:02:54] 2025-11-28 16:02:27,011 [wrapper] Pilot exit status: 0
[2025-11-28 11:02:54] 2025-11-28 16:02:27,020 [wrapper] pandaids: 6893834589
[2025-11-28 11:02:54] 2025-11-28 16:02:27,131 [wrapper] cleanup supervisor_pilot 3600242 1040691
[2025-11-28 11:02:54] 2025-11-28 16:02:27,134 [wrapper] Test setup, not cleaning
[2025-11-28 11:02:54] 2025-11-28 16:02:27,138 [wrapper] apfmon messages muted
[2025-11-28 11:02:54] 2025-11-28 16:02:27,140 [wrapper] ==== wrapper stdout END ====
[2025-11-28 11:02:54] 2025-11-28 16:02:27,143 [wrapper] ==== wrapper stderr END ====
[2025-11-28 11:02:54]  *** Error codes and diagnostics ***
[2025-11-28 11:02:54]     "exeErrorCode": 0,
[2025-11-28 11:02:54]     "exeErrorDiag": "",
[2025-11-28 11:02:54]     "pilotErrorCode": 0,
[2025-11-28 11:02:54]     "pilotErrorDiag": "",
[2025-11-28 11:02:54]  *** Listing of results directory ***
[2025-11-28 11:02:54] total 1308712
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:13 queuedata.json
[2025-11-28 11:02:54] -rwx------. 1 boincer umatlas     36292 Nov 20 05:13 runpilot2-wrapper.sh
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas       100 Nov 28 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 11:02:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 28 00:10 run_atlas
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas       105 Nov 28 00:10 job.xml
[2025-11-28 11:02:54] -rw-r--r--. 2 boincer umatlas 409210319 Nov 28 00:10 EVNT.47493127._000068.pool.root.1
[2025-11-28 11:02:54] -rw-r--r--. 2 boincer umatlas    590099 Nov 28 00:10 input.tar.gz
[2025-11-28 11:02:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 00:10 start_atlas.sh
[2025-11-28 11:02:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 28 00:10 shared
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas         0 Nov 28 00:10 boinc_lockfile
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas      2784 Nov 28 00:10 pandaJob.out
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas        57 Nov 28 00:10 setup.sh.local
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas    991858 Nov 28 00:11 agis_schedconf.cvmfs.json
[2025-11-28 11:02:54] drwx------. 5 boincer umatlas      4096 Nov 28 00:12 pilot3
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas       533 Nov 28 10:57 boinc_task_state.xml
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas 913168561 Nov 28 11:01 HITS.47523449._000678.pool.root.1
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas      1065 Nov 28 11:01 memory_monitor_summary.json
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas   1516240 Nov 28 11:01 agis_ddmendpoints.agis.ALL.json
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas   1868510 Nov 28 11:01 log.47523449._000678.job.log.tgz.1
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas      8614 Nov 28 11:01 heartbeat.json
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas      7176 Nov 28 11:02 init_data.xml
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas       823 Nov 28 11:02 pilotlog.txt
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas        95 Nov 28 11:02 pilot_heartbeat.json
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas   5040839 Nov 28 11:02 log.47523449._000678.job.log.1
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas       353 Nov 28 11:02 output.list
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas       620 Nov 28 11:02 runtime_log
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas   6932480 Nov 28 11:02 result.tar.gz
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas      9361 Nov 28 11:02 runtime_log.err
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas       664 Nov 28 11:02 ij1KDmdqGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvDHKDm3AmSYo.diag
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas        29 Nov 28 11:02 wrapper_checkpoint.txt
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 11:02 boinc_mmap_file
[2025-11-28 11:02:54] -rw-r--r--. 1 boincer umatlas     21180 Nov 28 11:02 stderr.txt
[2025-11-28 11:02:54] HITS file was successfully produced:
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas 913168561 Nov 28 11:01 shared/HITS.pool.root.1
[2025-11-28 11:02:54]  *** Contents of shared directory: ***
[2025-11-28 11:02:54] total 1298764
[2025-11-28 11:02:54] -rw-r--r--. 2 boincer umatlas 409210319 Nov 28 00:10 ATLAS.root_0
[2025-11-28 11:02:54] -rw-r--r--. 2 boincer umatlas    590099 Nov 28 00:10 input.tar.gz
[2025-11-28 11:02:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 00:10 start_atlas.sh
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas 913168561 Nov 28 11:01 HITS.pool.root.1
[2025-11-28 11:02:54] -rw-------. 1 boincer umatlas   6932480 Nov 28 11:02 result.tar.gz
11:02:56 (1025998): run_atlas exited; CPU time 140702.755131
11:02:56 (1025998): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN