Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:28 (3521342): wrapper (7.7.26015): starting
00:04:28 (3521342): wrapper: running run_atlas (--nthreads 9)
[2025-11-28 00:04:28] Arguments: --nthreads 9
[2025-11-28 00:04:28] Threads: 9
[2025-11-28 00:04:28] Checking for CVMFS
[2025-11-28 00:04:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 00:04:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 00:04:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 00:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 00:04:30] 2.13.3.0 9393 32439 344280 153397 2 444 21900495 32935937 22868 16776704 0 121920687 99.534 147791454 38915 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-28 00:04:30] CVMFS is ok
[2025-11-28 00:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 00:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 00:04:30] Further information can be found at the LHC@home message board.
[2025-11-28 00:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 00:04:30] Checking for apptainer binary...
[2025-11-28 00:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 00:04:30] Running /usr/bin/apptainer --version
[2025-11-28 00:04:30] apptainer version 1.4.4-1.el9
[2025-11-28 00:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 00:04:31] c6-6-39-1.aglt2.org
[2025-11-28 00:04:31] apptainer works
[2025-11-28 00:04:31] Set ATHENA_PROC_NUMBER=9
[2025-11-28 00:04:31] Set ATHENA_CORE_NUMBER=9
[2025-11-28 00:04:32] Starting ATLAS job with PandaID=6898762237
[2025-11-28 00:04:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 14:51:35]  *** The last 200 lines of the pilot log: ***
[2025-11-28 14:51:35] 2025-11-28 19:50:36,285 | INFO     | sum of square deviations: 199252397188.55185
[2025-11-28 14:51:35] 2025-11-28 19:50:36,298 | INFO     | sum of deviations: 2504598652456.842
[2025-11-28 14:51:35] 2025-11-28 19:50:36,298 | INFO     | mean x: 1764332825.2711473
[2025-11-28 14:51:35] 2025-11-28 19:50:36,298 | INFO     | mean y: 2985776.8852838934
[2025-11-28 14:51:35] 2025-11-28 19:50:36,298 | INFO     | intersect: -22174642593.015102
[2025-11-28 14:51:35] 2025-11-28 19:50:36,299 | INFO     | chi2: 10.246022394434032
[2025-11-28 14:51:35] 2025-11-28 19:50:36,299 | INFO     | current chi2=10.246022394434032 (change=25.10977551830103 %)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,300 | INFO     | sum of square deviations: 195810236920.16333
[2025-11-28 14:51:35] 2025-11-28 19:50:36,314 | INFO     | sum of deviations: 2565971587184.532
[2025-11-28 14:51:35] 2025-11-28 19:50:36,314 | INFO     | mean x: 1764332672.8135197
[2025-11-28 14:51:35] 2025-11-28 19:50:36,314 | INFO     | mean y: 2988486.247086247
[2025-11-28 14:51:35] 2025-11-28 19:50:36,314 | INFO     | intersect: -23117495815.228416
[2025-11-28 14:51:35] 2025-11-28 19:50:36,315 | INFO     | chi2: 9.889151154019858
[2025-11-28 14:51:35] 2025-11-28 19:50:36,315 | INFO     | current chi2=9.889151154019858 (change=3.4830222565982067 %)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,315 | INFO     | right removable region: 857
[2025-11-28 14:51:35] 2025-11-28 19:50:36,316 | INFO     | sum of square deviations: 199248622156.0926
[2025-11-28 14:51:35] 2025-11-28 19:50:36,330 | INFO     | sum of deviations: 1811394790863.2915
[2025-11-28 14:51:35] 2025-11-28 19:50:36,330 | INFO     | mean x: 1764333130.2699883
[2025-11-28 14:51:35] 2025-11-28 19:50:36,330 | INFO     | mean y: 2988164.3163383547
[2025-11-28 14:51:35] 2025-11-28 19:50:36,330 | INFO     | intersect: -16036790715.634417
[2025-11-28 14:51:35] 2025-11-28 19:50:36,331 | INFO     | chi2: 9.019510485456756
[2025-11-28 14:51:35] 2025-11-28 19:50:36,331 | INFO     | current chi2=9.019510485456756 (change=34.07459607566027 %)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,333 | INFO     | sum of square deviations: 195802687221.41226
[2025-11-28 14:51:35] 2025-11-28 19:50:36,347 | INFO     | sum of deviations: 1486099442131.1758
[2025-11-28 14:51:35] 2025-11-28 19:50:36,347 | INFO     | mean x: 1764333282.8111887
[2025-11-28 14:51:35] 2025-11-28 19:50:36,347 | INFO     | mean y: 3002564.8776223776
[2025-11-28 14:51:35] 2025-11-28 19:50:36,347 | INFO     | intersect: -13387900004.065487
[2025-11-28 14:51:35] 2025-11-28 19:50:36,348 | INFO     | chi2: 5.6634581149876535
[2025-11-28 14:51:35] 2025-11-28 19:50:36,349 | INFO     | current chi2=5.6634581149876535 (change=37.20880834808574 %)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,349 | INFO     | sum of square deviations: 192396763852.19235
[2025-11-28 14:51:35] 2025-11-28 19:50:36,363 | INFO     | sum of deviations: 1271853445312.4683
[2025-11-28 14:51:35] 2025-11-28 19:50:36,363 | INFO     | mean x: 1764333435.3505275
[2025-11-28 14:51:35] 2025-11-28 19:50:36,363 | INFO     | mean y: 3012151.6271981243
[2025-11-28 14:51:35] 2025-11-28 19:50:36,363 | INFO     | intersect: -11660248256.19583
[2025-11-28 14:51:35] 2025-11-28 19:50:36,364 | INFO     | chi2: 4.210239622592547
[2025-11-28 14:51:35] 2025-11-28 19:50:36,364 | INFO     | current chi2=4.210239622592547 (change=25.659561047151396 %)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,365 | INFO     | sum of square deviations: 189031193056.75
[2025-11-28 14:51:35] 2025-11-28 19:50:36,378 | INFO     | sum of deviations: 1192926574136.6245
[2025-11-28 14:51:35] 2025-11-28 19:50:36,378 | INFO     | mean x: 1764333587.875
[2025-11-28 14:51:35] 2025-11-28 19:50:36,378 | INFO     | mean y: 3015728.0341981133
[2025-11-28 14:51:35] 2025-11-28 19:50:36,379 | INFO     | intersect: -11131233538.360868
[2025-11-28 14:51:35] 2025-11-28 19:50:36,379 | INFO     | chi2: 4.103810289457945
[2025-11-28 14:51:35] 2025-11-28 19:50:36,380 | INFO     | current chi2=4.103810289457945 (change=2.5278687836077567 %)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,380 | INFO     | left removable region: 40
[2025-11-28 14:51:35] 2025-11-28 19:50:36,381 | INFO     | sum of square deviations: 169043521794.24277
[2025-11-28 14:51:35] 2025-11-28 19:50:36,393 | INFO     | sum of deviations: 1362868181451.6233
[2025-11-28 14:51:35] 2025-11-28 19:50:36,393 | INFO     | mean x: 1764333862.5495715
[2025-11-28 14:51:35] 2025-11-28 19:50:36,393 | INFO     | mean y: 3042999.4908200735
[2025-11-28 14:51:35] 2025-11-28 19:50:36,393 | INFO     | intersect: -14221426871.961813
[2025-11-28 14:51:35] 2025-11-28 19:50:36,394 | INFO     | chi2: 0.07133854788959851
[2025-11-28 14:51:35] 2025-11-28 19:50:36,394 | INFO     | current memory leak: 8.06 B/s (using 817 data points, chi2=0.07)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,395 | INFO     | could have reported an average CPU frequency of 2874 MHz (32 samples)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,395 | INFO     | ..............................
[2025-11-28 14:51:35] 2025-11-28 19:50:36,395 | INFO     | . Timing measurements:
[2025-11-28 14:51:35] 2025-11-28 19:50:36,395 | INFO     | . get job = 0 s
[2025-11-28 14:51:35] 2025-11-28 19:50:36,395 | INFO     | . initial setup = 5 s
[2025-11-28 14:51:35] 2025-11-28 19:50:36,395 | INFO     | . payload setup = 53 s
[2025-11-28 14:51:35] 2025-11-28 19:50:36,396 | INFO     | . stage-in = 0 s
[2025-11-28 14:51:35] 2025-11-28 19:50:36,396 | INFO     | . payload execution = 52931 s
[2025-11-28 14:51:35] 2025-11-28 19:50:36,396 | INFO     | . stage-out = 3 s
[2025-11-28 14:51:35] 2025-11-28 19:50:36,396 | INFO     | . log creation = 0 s
[2025-11-28 14:51:35] 2025-11-28 19:50:36,396 | INFO     | ..............................
[2025-11-28 14:51:35] 2025-11-28 19:50:36,813 | INFO     | 
[2025-11-28 14:51:35] 2025-11-28 19:50:36,813 | INFO     | job summary report
[2025-11-28 14:51:35] 2025-11-28 19:50:36,813 | INFO     | --------------------------------------------------
[2025-11-28 14:51:35] 2025-11-28 19:50:36,813 | INFO     | PanDA job id: 6898762237
[2025-11-28 14:51:35] 2025-11-28 19:50:36,813 | INFO     | task id: 47556161
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | errors: (none)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | pilot state: finished 
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | transexitcode: 0
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | exeerrorcode: 0
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | exeerrordiag: 
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | exitcode: 0
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | exitmsg: OK
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | cpuconsumptiontime: 231503 s
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | nevents: 1000
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | neventsw: 0
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | pid: 3551560
[2025-11-28 14:51:35] 2025-11-28 19:50:36,814 | INFO     | pgrp: 3551560
[2025-11-28 14:51:35] 2025-11-28 19:50:36,815 | INFO     | corecount: 9
[2025-11-28 14:51:35] 2025-11-28 19:50:36,815 | INFO     | event service: False
[2025-11-28 14:51:35] 2025-11-28 19:50:36,815 | INFO     | sizes: {0: 2283487, 1: 2284172, 2: 2284371, 3: 2284371, 14: 2284399, 25: 2284427, 36: 2284583, 38: 2284873, 47: 2284901, 52988: 2334103, 52991: 2343097, 52994: 234
[2025-11-28 14:51:35] 2025-11-28 19:50:36,815 | INFO     | --------------------------------------------------
[2025-11-28 14:51:35] 2025-11-28 19:50:36,815 | INFO     | 
[2025-11-28 14:51:35] 2025-11-28 19:50:36,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-28 14:51:35] 2025-11-28 19:50:36,840 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,840 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,840 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,840 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,840 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,840 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,840 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,840 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 14:51:35] 2025-11-28 19:50:36,841 | INFO     | job 6898762237 has completed (purged errors)
[2025-11-28 14:51:35] 2025-11-28 19:50:36,842 | INFO     | overall cleanup function is called
[2025-11-28 14:51:35] 2025-11-28 19:50:37,857 | INFO     | --- collectZombieJob: --- 10, [3551560]
[2025-11-28 14:51:35] 2025-11-28 19:50:37,858 | INFO     | zombie collector waiting for pid 3551560
[2025-11-28 14:51:35] 2025-11-28 19:50:37,858 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 14:51:35] 2025-11-28 19:50:37,858 | INFO     | collected zombie processes
[2025-11-28 14:51:35] 2025-11-28 19:50:37,858 | INFO     | will attempt to kill all subprocesses of pid=3551560
[2025-11-28 14:51:35] 2025-11-28 19:50:38,265 | INFO     | process IDs to be killed: [3551560] (in reverse order)
[2025-11-28 14:51:35] 2025-11-28 19:50:38,390 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 14:51:35] 2025-11-28 19:50:38,390 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 14:51:35] 2025-11-28 19:50:38,406 | INFO     | did not find any defunct processes belonging to 3551560
[2025-11-28 14:51:35] 2025-11-28 19:50:38,421 | INFO     | did not find any defunct processes belonging to 3551560
[2025-11-28 14:51:35] 2025-11-28 19:50:38,422 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 14:51:35] 2025-11-28 19:50:38,423 | INFO     | ready for new job
[2025-11-28 14:51:35] 2025-11-28 19:50:38,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 14:51:35] 2025-11-28 19:50:38,426 | INFO     | ***************************************
[2025-11-28 14:51:35] 2025-11-28 19:50:38,427 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 14:51:35] 2025-11-28 19:50:38,427 | INFO     | ***************************************
[2025-11-28 14:51:35] 2025-11-28 19:50:38,427 | INFO     | 
[2025-11-28 14:51:35] 2025-11-28 19:50:38,430 | INFO     | architecture information:
[2025-11-28 14:51:35] 2025-11-28 19:50:38,430 | INFO     | executing command: cat /etc/os-release
[2025-11-28 14:51:35] 2025-11-28 19:50:38,449 | INFO     | cat /etc/os-release:
[2025-11-28 14:51:35] NAME="CentOS Linux"
[2025-11-28 14:51:35] VERSION="7 (Core)"
[2025-11-28 14:51:35] ID="centos"
[2025-11-28 14:51:35] ID_LIKE="rhel fedora"
[2025-11-28 14:51:35] VERSION_ID="7"
[2025-11-28 14:51:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 14:51:35] ANSI_COLOR="0;31"
[2025-11-28 14:51:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 14:51:35] HOME_URL="https://www.centos.org/"
[2025-11-28 14:51:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 14:51:35] 
[2025-11-28 14:51:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 14:51:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 14:51:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 14:51:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 14:51:35] 
[2025-11-28 14:51:35] 2025-11-28 19:50:38,449 | INFO     | ***************************************
[2025-11-28 14:51:35] 2025-11-28 19:50:38,953 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-28 14:51:35] 2025-11-28 19:50:38,992 | INFO     | sufficient remaining disk space (70990692352 B)
[2025-11-28 14:51:35] 2025-11-28 19:50:38,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 14:51:35] 2025-11-28 19:50:38,993 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 14:51:35] 2025-11-28 19:50:38,993 | INFO     | update_server=False
[2025-11-28 14:51:35] 2025-11-28 19:50:38,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 14:51:35] 2025-11-28 19:50:38,993 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:51:35] 2025-11-28 19:50:38,994 | INFO     | aborting loop
[2025-11-28 14:51:35] 2025-11-28 19:50:38,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 14:51:35] 2025-11-28 19:50:39,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 14:51:35] 2025-11-28 19:50:39,479 | INFO     | all job control threads have been joined
[2025-11-28 14:51:35] 2025-11-28 19:50:39,972 | INFO     | all payload control threads have been joined
[2025-11-28 14:51:35] 2025-11-28 19:50:39,999 | INFO     | [job] retrieve thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:39,999 | INFO     | [job] job monitor thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:40,039 | INFO     | all data control threads have been joined
[2025-11-28 14:51:35] 2025-11-28 19:50:40,165 | INFO     | [payload] failed_post thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:40,257 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:40,487 | INFO     | [job] control thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:40,509 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:40,587 | INFO     | [payload] validate_post thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:40,895 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:40,978 | INFO     | [payload] control thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:40,999 | INFO     | [data] copytool_out thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:41,024 | INFO     | [data] copytool_in thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:41,044 | INFO     | [data] control thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:41,148 | INFO     | [job] validate thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:41,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:51:35] 2025-11-28 19:50:42,505 | INFO     | [job] queue monitor thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:43,139 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:49,554 | INFO     | job.realtimelogging is not enabled
[2025-11-28 14:51:35] 2025-11-28 19:50:50,560 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 14:51:35] 2025-11-28 19:50:53,080 [wrapper] supervise_pilot (15 min periods counter: 60)
[2025-11-28 14:51:35] 2025-11-28 19:51:09,076 | INFO     | PID=3532871 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 14:51:35] 2025-11-28 19:51:09,076 | INFO     | .. there are 31 such processes running
[2025-11-28 14:51:35] 2025-11-28 19:51:09,076 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 14:51:35] 2025-11-28 19:51:09,077 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 14:51:35] 2025-11-28 19:51:09,077 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 14:51:35] 2025-11-28 19:51:27,919 | INFO     | [monitor] cgroup control has ended
[2025-11-28 14:51:35] 2025-11-28 19:51:29,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140441835730752)>', '<ExcThread(monitor, started 140441043322624)>']
[2025-11-28 14:51:35] 2025-11-28 19:51:30,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 14:51:35] 2025-11-28 19:51:30,211 | INFO     | [monitor] control thread has ended
[2025-11-28 14:51:35] 2025-11-28 19:51:34,704 | INFO     | all workflow threads have been joined
[2025-11-28 14:51:35] 2025-11-28 19:51:34,704 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 14:51:35] 2025-11-28 19:51:34,704 | INFO     | traces error code: 0
[2025-11-28 14:51:35] 2025-11-28 19:51:34,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 14:51:35] 2025-11-28 19:51:34,867 [wrapper] ==== pilot stdout END ====
[2025-11-28 14:51:35] 2025-11-28 19:51:34,870 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 14:51:35] 2025-11-28 19:51:34,872 [wrapper] pilotpid: 3532871
[2025-11-28 14:51:35] 2025-11-28 19:51:34,875 [wrapper] Pilot exit status: 0
[2025-11-28 14:51:35] 2025-11-28 19:51:34,886 [wrapper] pandaids: 6898762237
[2025-11-28 14:51:35] 2025-11-28 19:51:34,981 [wrapper] cleanup supervisor_pilot 2092336 3532872
[2025-11-28 14:51:35] 2025-11-28 19:51:34,990 [wrapper] Test setup, not cleaning
[2025-11-28 14:51:35] 2025-11-28 19:51:34,997 [wrapper] apfmon messages muted
[2025-11-28 14:51:35] 2025-11-28 19:51:34,999 [wrapper] ==== wrapper stdout END ====
[2025-11-28 14:51:35] 2025-11-28 19:51:35,002 [wrapper] ==== wrapper stderr END ====
[2025-11-28 14:51:35]  *** Error codes and diagnostics ***
[2025-11-28 14:51:35]     "exeErrorCode": 0,
[2025-11-28 14:51:35]     "exeErrorDiag": "",
[2025-11-28 14:51:35]     "pilotErrorCode": 0,
[2025-11-28 14:51:35]     "pilotErrorDiag": "",
[2025-11-28 14:51:35]  *** Listing of results directory ***
[2025-11-28 14:51:35] total 1324576
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 18:42 pilot3.tar.gz
[2025-11-28 14:51:35] -rwx------. 1 boincer umatlas     36292 Nov 26 18:47 runpilot2-wrapper.sh
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 18:47 queuedata.json
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas       100 Nov 28 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 14:51:35] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 28 00:04 run_atlas
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas       105 Nov 28 00:04 job.xml
[2025-11-28 14:51:35] -rw-r--r--. 2 boincer umatlas 410210120 Nov 28 00:04 EVNT.47483658._002741.pool.root.1
[2025-11-28 14:51:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 00:04 start_atlas.sh
[2025-11-28 14:51:35] drwxrwx--x. 2 boincer umatlas      4096 Nov 28 00:04 shared
[2025-11-28 14:51:35] -rw-r--r--. 2 boincer umatlas    590099 Nov 28 00:04 input.tar.gz
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas         0 Nov 28 00:04 boinc_lockfile
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas      2786 Nov 28 00:04 pandaJob.out
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas        57 Nov 28 00:04 setup.sh.local
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas    991858 Nov 28 00:05 agis_schedconf.cvmfs.json
[2025-11-28 14:51:35] drwx------. 5 boincer umatlas      4096 Nov 28 00:05 pilot3
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas       533 Nov 28 14:41 boinc_task_state.xml
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas      6844 Nov 28 14:46 init_data.xml
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas 924329596 Nov 28 14:49 HITS.47556161._007232.pool.root.1
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas      1057 Nov 28 14:50 memory_monitor_summary.json
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas   1516240 Nov 28 14:50 agis_ddmendpoints.agis.ALL.json
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas   2164242 Nov 28 14:50 log.47556161._007232.job.log.tgz.1
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas      8628 Nov 28 14:50 heartbeat.json
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas        95 Nov 28 14:51 pilot_heartbeat.json
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 14:51 boinc_mmap_file
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas        29 Nov 28 14:51 wrapper_checkpoint.txt
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas      4896 Nov 28 14:51 pilotlog.txt
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas   6787593 Nov 28 14:51 log.47556161._007232.job.log.1
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas       353 Nov 28 14:51 output.list
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas       620 Nov 28 14:51 runtime_log
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas   8970240 Nov 28 14:51 result.tar.gz
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas      9348 Nov 28 14:51 runtime_log.err
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas       661 Nov 28 14:51 Na3NDmSPei8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvQNKDmoFgIdn.diag
[2025-11-28 14:51:35] -rw-r--r--. 1 boincer umatlas     21206 Nov 28 14:51 stderr.txt
[2025-11-28 14:51:35] HITS file was successfully produced:
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas 924329596 Nov 28 14:49 shared/HITS.pool.root.1
[2025-11-28 14:51:35]  *** Contents of shared directory: ***
[2025-11-28 14:51:35] total 1312628
[2025-11-28 14:51:35] -rw-r--r--. 2 boincer umatlas 410210120 Nov 28 00:04 ATLAS.root_0
[2025-11-28 14:51:35] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 00:04 start_atlas.sh
[2025-11-28 14:51:35] -rw-r--r--. 2 boincer umatlas    590099 Nov 28 00:04 input.tar.gz
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas 924329596 Nov 28 14:49 HITS.pool.root.1
[2025-11-28 14:51:35] -rw-------. 1 boincer umatlas   8970240 Nov 28 14:51 result.tar.gz
14:51:37 (3521342): run_atlas exited; CPU time 232803.081674
14:51:37 (3521342): called boinc_finish(0)

</stderr_txt>
]]>

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