Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:37:22 (31946): wrapper (7.7.26015): starting
23:37:22 (31946): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 23:37:22] Arguments: --nthreads 8
[2025-11-27 23:37:22] Threads: 8
[2025-11-27 23:37:22] Checking for CVMFS
[2025-11-27 23:37:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 23:37:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 23:37:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 23:37:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 23:37:22] 2.11.2.0 2830 59565 84768 153397 3 81 14607860 20275200 1 130560 0 12737076 99.764 3945443 28105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 23:37:22] CVMFS is ok
[2025-11-27 23:37:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 23:37:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 23:37:22] Further information can be found at the LHC@home message board.
[2025-11-27 23:37:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 23:37:22] Checking for apptainer binary...
[2025-11-27 23:37:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 23:37:22] Running /usr/bin/apptainer --version
[2025-11-27 23:37:22] apptainer version 1.3.2-1.el7
[2025-11-27 23:37:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 23:37:24] c-204-15.aglt2.org
[2025-11-27 23:37:24] apptainer works
[2025-11-27 23:37:24] Set ATHENA_PROC_NUMBER=8
[2025-11-27 23:37:24] Set ATHENA_CORE_NUMBER=8
[2025-11-27 23:37:24] Starting ATLAS job with PandaID=6895363947
[2025-11-27 23:37:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 12:00:00]  *** The last 200 lines of the pilot log: ***
[2025-11-28 12:00:00] 2025-11-28 16:58:54,965 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 12:00:00] 2025-11-28 16:58:54,965 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 12:00:00] 2025-11-28 16:58:54,980 | INFO     | fitting pss+swap vs Time
[2025-11-28 12:00:00] 2025-11-28 16:58:54,981 | INFO     | sum of square deviations: 120132055118.66939
[2025-11-28 12:00:00] 2025-11-28 16:58:54,993 | INFO     | sum of deviations: 566665026259.5758
[2025-11-28 12:00:00] 2025-11-28 16:58:54,993 | INFO     | mean x: 1764326898.6364884
[2025-11-28 12:00:00] 2025-11-28 16:58:54,993 | INFO     | mean y: 3208308.6625514403
[2025-11-28 12:00:00] 2025-11-28 16:58:54,993 | INFO     | intersect: -8319152840.979917
[2025-11-28 12:00:00] 2025-11-28 16:58:54,994 | INFO     | chi2: 8.296797973322422
[2025-11-28 12:00:00] 2025-11-28 16:58:54,995 | INFO     | sum of square deviations: 117677248281.62987
[2025-11-28 12:00:00] 2025-11-28 16:58:55,007 | INFO     | sum of deviations: 869172542317.6664
[2025-11-28 12:00:00] 2025-11-28 16:58:55,007 | INFO     | mean x: 1764326746.140884
[2025-11-28 12:00:00] 2025-11-28 16:58:55,007 | INFO     | mean y: 3227103.3660220993
[2025-11-28 12:00:00] 2025-11-28 16:58:55,007 | INFO     | intersect: -13028215981.981152
[2025-11-28 12:00:00] 2025-11-28 16:58:55,008 | INFO     | chi2: 4.464967594599164
[2025-11-28 12:00:00] 2025-11-28 16:58:55,008 | INFO     | current chi2=4.464967594599164 (change=46.18444839857677 %)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,009 | INFO     | sum of square deviations: 115256116494.5619
[2025-11-28 12:00:00] 2025-11-28 16:58:55,022 | INFO     | sum of deviations: 1027466100191.3939
[2025-11-28 12:00:00] 2025-11-28 16:58:55,022 | INFO     | mean x: 1764326593.6453407
[2025-11-28 12:00:00] 2025-11-28 16:58:55,022 | INFO     | mean y: 3237073.6995827537
[2025-11-28 12:00:00] 2025-11-28 16:58:55,022 | INFO     | intersect: -15725088847.487223
[2025-11-28 12:00:00] 2025-11-28 16:58:55,023 | INFO     | chi2: 3.328189690110745
[2025-11-28 12:00:00] 2025-11-28 16:58:55,023 | INFO     | current chi2=3.328189690110745 (change=25.459936279570506 %)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,024 | INFO     | sum of square deviations: 112868427194.9648
[2025-11-28 12:00:00] 2025-11-28 16:58:55,036 | INFO     | sum of deviations: 1141305185892.0518
[2025-11-28 12:00:00] 2025-11-28 16:58:55,036 | INFO     | mean x: 1764326441.14986
[2025-11-28 12:00:00] 2025-11-28 16:58:55,036 | INFO     | mean y: 3244332.0182072828
[2025-11-28 12:00:00] 2025-11-28 16:58:55,036 | INFO     | intersect: -17837306537.114784
[2025-11-28 12:00:00] 2025-11-28 16:58:55,037 | INFO     | chi2: 2.5758883327051736
[2025-11-28 12:00:00] 2025-11-28 16:58:55,037 | INFO     | current chi2=2.5758883327051736 (change=22.603920673179502 %)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,038 | INFO     | right removable region: 713
[2025-11-28 12:00:00] 2025-11-28 16:58:55,038 | INFO     | sum of square deviations: 117676965241.62982
[2025-11-28 12:00:00] 2025-11-28 16:58:55,050 | INFO     | sum of deviations: 337158767180.05176
[2025-11-28 12:00:00] 2025-11-28 16:58:55,050 | INFO     | mean x: 1764327051.140884
[2025-11-28 12:00:00] 2025-11-28 16:58:55,051 | INFO     | mean y: 3222540.6367403315
[2025-11-28 12:00:00] 2025-11-28 16:58:55,051 | INFO     | intersect: -5051788287.044235
[2025-11-28 12:00:00] 2025-11-28 16:58:55,052 | INFO     | chi2: 5.884141279102469
[2025-11-28 12:00:00] 2025-11-28 16:58:55,052 | INFO     | current chi2=5.884141279102469 (change=29.079371366852907 %)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,053 | INFO     | sum of square deviations: 115255682541.4214
[2025-11-28 12:00:00] 2025-11-28 16:58:55,065 | INFO     | sum of deviations: 293259772399.90625
[2025-11-28 12:00:00] 2025-11-28 16:58:55,065 | INFO     | mean x: 1764327203.6411684
[2025-11-28 12:00:00] 2025-11-28 16:58:55,065 | INFO     | mean y: 3225303.922114047
[2025-11-28 12:00:00] 2025-11-28 16:58:55,065 | INFO     | intersect: -4485978028.7883835
[2025-11-28 12:00:00] 2025-11-28 16:58:55,066 | INFO     | chi2: 5.84042320253002
[2025-11-28 12:00:00] 2025-11-28 16:58:55,066 | INFO     | current chi2=5.84042320253002 (change=0.7429814224161093 %)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,067 | INFO     | left removable region: 20
[2025-11-28 12:00:00] 2025-11-28 16:58:55,067 | INFO     | sum of square deviations: 103199332164.88304
[2025-11-28 12:00:00] 2025-11-28 16:58:55,078 | INFO     | sum of deviations: 816395994044.2563
[2025-11-28 12:00:00] 2025-11-28 16:58:55,078 | INFO     | mean x: 1764327020.6536796
[2025-11-28 12:00:00] 2025-11-28 16:58:55,078 | INFO     | mean y: 3265178.8802308803
[2025-11-28 12:00:00] 2025-11-28 16:58:55,078 | INFO     | intersect: -13954087854.610056
[2025-11-28 12:00:00] 2025-11-28 16:58:55,079 | INFO     | chi2: 0.07029487573423843
[2025-11-28 12:00:00] 2025-11-28 16:58:55,079 | INFO     | current memory leak: 7.91 B/s (using 693 data points, chi2=0.07)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,080 | INFO     | could have reported an average CPU frequency of 2160 MHz (28 samples)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,080 | INFO     | ..............................
[2025-11-28 12:00:00] 2025-11-28 16:58:55,080 | INFO     | . Timing measurements:
[2025-11-28 12:00:00] 2025-11-28 16:58:55,081 | INFO     | . get job = 0 s
[2025-11-28 12:00:00] 2025-11-28 16:58:55,081 | INFO     | . initial setup = 2 s
[2025-11-28 12:00:00] 2025-11-28 16:58:55,081 | INFO     | . payload setup = 9 s
[2025-11-28 12:00:00] 2025-11-28 16:58:55,081 | INFO     | . stage-in = 0 s
[2025-11-28 12:00:00] 2025-11-28 16:58:55,081 | INFO     | . payload execution = 44429 s
[2025-11-28 12:00:00] 2025-11-28 16:58:55,081 | INFO     | . stage-out = 3 s
[2025-11-28 12:00:00] 2025-11-28 16:58:55,081 | INFO     | . log creation = 0 s
[2025-11-28 12:00:00] 2025-11-28 16:58:55,082 | INFO     | ..............................
[2025-11-28 12:00:00] 2025-11-28 16:58:55,177 | INFO     | 
[2025-11-28 12:00:00] 2025-11-28 16:58:55,177 | INFO     | job summary report
[2025-11-28 12:00:00] 2025-11-28 16:58:55,177 | INFO     | --------------------------------------------------
[2025-11-28 12:00:00] 2025-11-28 16:58:55,177 | INFO     | PanDA job id: 6895363947
[2025-11-28 12:00:00] 2025-11-28 16:58:55,177 | INFO     | task id: 47556149
[2025-11-28 12:00:00] 2025-11-28 16:58:55,178 | INFO     | errors: (none)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,178 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 12:00:00] 2025-11-28 16:58:55,178 | INFO     | pilot state: finished 
[2025-11-28 12:00:00] 2025-11-28 16:58:55,178 | INFO     | transexitcode: 0
[2025-11-28 12:00:00] 2025-11-28 16:58:55,179 | INFO     | exeerrorcode: 0
[2025-11-28 12:00:00] 2025-11-28 16:58:55,179 | INFO     | exeerrordiag: 
[2025-11-28 12:00:00] 2025-11-28 16:58:55,180 | INFO     | exitcode: 0
[2025-11-28 12:00:00] 2025-11-28 16:58:55,180 | INFO     | exitmsg: OK
[2025-11-28 12:00:00] 2025-11-28 16:58:55,180 | INFO     | cpuconsumptiontime: 342772 s
[2025-11-28 12:00:00] 2025-11-28 16:58:55,180 | INFO     | nevents: 1000
[2025-11-28 12:00:00] 2025-11-28 16:58:55,180 | INFO     | neventsw: 0
[2025-11-28 12:00:00] 2025-11-28 16:58:55,181 | INFO     | pid: 10839
[2025-11-28 12:00:00] 2025-11-28 16:58:55,181 | INFO     | pgrp: 10839
[2025-11-28 12:00:00] 2025-11-28 16:58:55,181 | INFO     | corecount: 8
[2025-11-28 12:00:00] 2025-11-28 16:58:55,181 | INFO     | event service: False
[2025-11-28 12:00:00] 2025-11-28 16:58:55,181 | INFO     | sizes: {0: 2283486, 1: 2284342, 7: 2284604, 12: 2284632, 44441: 2330390, 44446: 2339384, 44449: 2339568, 44455: 2339814}
[2025-11-28 12:00:00] 2025-11-28 16:58:55,182 | INFO     | --------------------------------------------------
[2025-11-28 12:00:00] 2025-11-28 16:58:55,182 | INFO     | 
[2025-11-28 12:00:00] 2025-11-28 16:58:55,182 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-28 12:00:00] 2025-11-28 16:58:55,208 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,208 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,209 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,211 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,211 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,212 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,212 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,212 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 12:00:00] 2025-11-28 16:58:55,214 | INFO     | job 6895363947 has completed (purged errors)
[2025-11-28 12:00:00] 2025-11-28 16:58:55,214 | INFO     | overall cleanup function is called
[2025-11-28 12:00:00] 2025-11-28 16:58:55,253 | INFO     | PID=3283 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 12:00:00] 2025-11-28 16:58:56,236 | INFO     | --- collectZombieJob: --- 10, [10839]
[2025-11-28 12:00:00] 2025-11-28 16:58:56,236 | INFO     | zombie collector waiting for pid 10839
[2025-11-28 12:00:00] 2025-11-28 16:58:56,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 12:00:00] 2025-11-28 16:58:56,243 | INFO     | collected zombie processes
[2025-11-28 12:00:00] 2025-11-28 16:58:56,244 | INFO     | will attempt to kill all subprocesses of pid=10839
[2025-11-28 12:00:00] 2025-11-28 16:58:56,335 | INFO     | process IDs to be killed: [10839] (in reverse order)
[2025-11-28 12:00:00] 2025-11-28 16:58:56,394 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 12:00:00] 2025-11-28 16:58:56,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 12:00:00] 2025-11-28 16:58:56,400 | INFO     | did not find any defunct processes belonging to 10839
[2025-11-28 12:00:00] 2025-11-28 16:58:56,403 | INFO     | did not find any defunct processes belonging to 10839
[2025-11-28 12:00:00] 2025-11-28 16:58:56,405 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 12:00:00] 2025-11-28 16:58:56,406 | INFO     | ready for new job
[2025-11-28 12:00:00] 2025-11-28 16:58:56,406 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 12:00:00] 2025-11-28 16:58:56,409 | INFO     | ***************************************
[2025-11-28 12:00:00] 2025-11-28 16:58:56,409 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 12:00:00] 2025-11-28 16:58:56,409 | INFO     | ***************************************
[2025-11-28 12:00:00] 2025-11-28 16:58:56,409 | INFO     | 
[2025-11-28 12:00:00] 2025-11-28 16:58:56,410 | INFO     | architecture information:
[2025-11-28 12:00:00] 2025-11-28 16:58:56,411 | INFO     | executing command: cat /etc/os-release
[2025-11-28 12:00:00] 2025-11-28 16:58:56,430 | INFO     | cat /etc/os-release:
[2025-11-28 12:00:00] NAME="CentOS Linux"
[2025-11-28 12:00:00] VERSION="7 (Core)"
[2025-11-28 12:00:00] ID="centos"
[2025-11-28 12:00:00] ID_LIKE="rhel fedora"
[2025-11-28 12:00:00] VERSION_ID="7"
[2025-11-28 12:00:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 12:00:00] ANSI_COLOR="0;31"
[2025-11-28 12:00:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 12:00:00] HOME_URL="https://www.centos.org/"
[2025-11-28 12:00:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 12:00:00] 
[2025-11-28 12:00:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 12:00:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 12:00:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 12:00:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 12:00:00] 
[2025-11-28 12:00:00] 2025-11-28 16:58:56,430 | INFO     | ***************************************
[2025-11-28 12:00:00] 2025-11-28 16:58:56,934 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-28 12:00:00] 2025-11-28 16:58:56,953 | INFO     | sufficient remaining disk space (17471373312 B)
[2025-11-28 12:00:00] 2025-11-28 16:58:56,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 12:00:00] 2025-11-28 16:58:56,955 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 12:00:00] 2025-11-28 16:58:56,955 | INFO     | update_server=False
[2025-11-28 12:00:00] 2025-11-28 16:58:56,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 12:00:00] 2025-11-28 16:58:56,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 12:00:00] 2025-11-28 16:58:56,956 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 12:00:00] 2025-11-28 16:58:56,956 | INFO     | aborting loop
[2025-11-28 12:00:00] 2025-11-28 16:58:56,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 12:00:00] 2025-11-28 16:58:57,098 | INFO     | all data control threads have been joined
[2025-11-28 12:00:00] 2025-11-28 16:58:57,853 | INFO     | all job control threads have been joined
[2025-11-28 12:00:00] 2025-11-28 16:58:57,961 | INFO     | [job] retrieve thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:57,962 | INFO     | [data] copytool_in thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:57,963 | INFO     | [job] job monitor thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:57,963 | INFO     | [job] queue monitor thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:57,987 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:58,031 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:58,038 | INFO     | all payload control threads have been joined
[2025-11-28 12:00:00] 2025-11-28 16:58:58,103 | INFO     | [data] control thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:58,255 | INFO     | [payload] validate_post thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:58,648 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:58,760 | INFO     | [job] validate thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:58,859 | INFO     | [job] control thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:58,961 | INFO     | [data] copytool_out thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:59,044 | INFO     | [payload] control thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:59,138 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:59,440 | INFO     | [payload] failed_post thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:58:59,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 12:00:00] 2025-11-28 16:59:03,670 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 12:00:00] 2025-11-28 16:59:27,455 | INFO     | PID=3283 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-28 12:00:00] 2025-11-28 16:59:27,456 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 12:00:00] 2025-11-28 16:59:27,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 12:00:00] 2025-11-28 16:59:27,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 12:00:00] 2025-11-28 16:59:54,964 | INFO     | [monitor] cgroup control has ended
[2025-11-28 12:00:00] 2025-11-28 16:59:55,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140059815356224)>', '<ExcThread(monitor, started 140059370034944)>']
[2025-11-28 12:00:00] 2025-11-28 16:59:55,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 12:00:00] 2025-11-28 16:59:55,581 | INFO     | [monitor] control thread has ended
[2025-11-28 12:00:00] 2025-11-28 17:00:00,246 | INFO     | all workflow threads have been joined
[2025-11-28 12:00:00] 2025-11-28 17:00:00,246 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 12:00:00] 2025-11-28 17:00:00,247 | INFO     | traces error code: 0
[2025-11-28 12:00:00] 2025-11-28 17:00:00,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 12:00:00] 2025-11-28 17:00:00,363 [wrapper] ==== pilot stdout END ====
[2025-11-28 12:00:00] 2025-11-28 17:00:00,368 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 12:00:00] 2025-11-28 17:00:00,373 [wrapper] pilotpid: 3283
[2025-11-28 12:00:00] 2025-11-28 17:00:00,378 [wrapper] Pilot exit status: 0
[2025-11-28 12:00:00] 2025-11-28 17:00:00,395 [wrapper] pandaids: 6895363947
[2025-11-28 12:00:00] 2025-11-28 17:00:00,455 [wrapper] cleanup supervisor_pilot 31963 3284
[2025-11-28 12:00:00] 2025-11-28 17:00:00,460 [wrapper] Test setup, not cleaning
[2025-11-28 12:00:00] 2025-11-28 17:00:00,466 [wrapper] apfmon messages muted
[2025-11-28 12:00:00] 2025-11-28 17:00:00,470 [wrapper] ==== wrapper stdout END ====
[2025-11-28 12:00:00] 2025-11-28 17:00:00,475 [wrapper] ==== wrapper stderr END ====
[2025-11-28 12:00:00]  *** Error codes and diagnostics ***
[2025-11-28 12:00:00]     "exeErrorCode": 0,
[2025-11-28 12:00:00]     "exeErrorDiag": "",
[2025-11-28 12:00:00]     "pilotErrorCode": 0,
[2025-11-28 12:00:00]     "pilotErrorDiag": "",
[2025-11-28 12:00:00]  *** Listing of results directory ***
[2025-11-28 12:00:00] total 1316560
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 10:18 pilot3.tar.gz
[2025-11-28 12:00:00] -rwx------ 1 boincer umatlas     36292 Nov 23 10:43 runpilot2-wrapper.sh
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 10:43 queuedata.json
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas       100 Nov 27 23:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 12:00:00] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 23:37 run_atlas
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas       105 Nov 27 23:37 job.xml
[2025-11-28 12:00:00] -rw-r--r-- 2 boincer umatlas 410455712 Nov 27 23:37 EVNT.47483658._001173.pool.root.1
[2025-11-28 12:00:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 23:37 start_atlas.sh
[2025-11-28 12:00:00] drwxrwx--x 2 boincer umatlas      4096 Nov 27 23:37 shared
[2025-11-28 12:00:00] -rw-r--r-- 2 boincer umatlas    590102 Nov 27 23:37 input.tar.gz
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas         0 Nov 27 23:37 boinc_lockfile
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 23:37 pandaJob.out
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas        57 Nov 27 23:37 setup.sh.local
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas    991858 Nov 27 23:37 agis_schedconf.cvmfs.json
[2025-11-28 12:00:00] drwx------ 5 boincer umatlas      4096 Nov 27 23:37 pilot3
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas       532 Nov 28 11:43 boinc_task_state.xml
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas      5912 Nov 28 11:54 init_data.xml
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas 917578254 Nov 28 11:58 HITS.47556149._001594.pool.root.1
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas      1063 Nov 28 11:58 memory_monitor_summary.json
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas   1516240 Nov 28 11:58 agis_ddmendpoints.agis.ALL.json
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas   1979187 Nov 28 11:58 log.47556149._001594.job.log.tgz.1
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas        95 Nov 28 11:58 pilot_heartbeat.json
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas      8660 Nov 28 11:58 heartbeat.json
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas      8192 Nov 28 11:59 boinc_mmap_file
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas        29 Nov 28 11:59 wrapper_checkpoint.txt
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas      4745 Nov 28 12:00 pilotlog.txt
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas   6120104 Nov 28 12:00 log.47556149._001594.job.log.1
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas       353 Nov 28 12:00 output.list
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas       620 Nov 28 12:00 runtime_log
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas   8120320 Nov 28 12:00 result.tar.gz
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas      9343 Nov 28 12:00 runtime_log.err
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas       668 Nov 28 12:00 iTlNDmrQRh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmF1KKDmwC0P3m.diag
[2025-11-28 12:00:00] -rw-r--r-- 1 boincer umatlas     21220 Nov 28 12:00 stderr.txt
[2025-11-28 12:00:00] HITS file was successfully produced:
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas 917578254 Nov 28 11:58 shared/HITS.pool.root.1
[2025-11-28 12:00:00]  *** Contents of shared directory: ***
[2025-11-28 12:00:00] total 1305444
[2025-11-28 12:00:00] -rw-r--r-- 2 boincer umatlas 410455712 Nov 27 23:37 ATLAS.root_0
[2025-11-28 12:00:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 23:37 start_atlas.sh
[2025-11-28 12:00:00] -rw-r--r-- 2 boincer umatlas    590102 Nov 27 23:37 input.tar.gz
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas 917578254 Nov 28 11:58 HITS.pool.root.1
[2025-11-28 12:00:00] -rw------- 1 boincer umatlas   8120320 Nov 28 12:00 result.tar.gz
12:00:02 (31946): run_atlas exited; CPU time 340556.259706
12:00:02 (31946): called boinc_finish(0)

</stderr_txt>
]]>

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