Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:43:43 (1145342): wrapper (7.7.26015): starting
07:43:43 (1145342): wrapper: running run_atlas (--nthreads 4)
[2025-12-02 07:43:43] Arguments: --nthreads 4
[2025-12-02 07:43:43] Threads: 4
[2025-12-02 07:43:43] Checking for CVMFS
[2025-12-02 07:43:43] No cvmfs_config command found, will try listing directly
[2025-12-02 07:43:43] CVMFS is ok
[2025-12-02 07:43:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 07:43:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 07:43:43] Further information can be found at the LHC@home message board.
[2025-12-02 07:43:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 07:43:43] Checking for apptainer binary...
[2025-12-02 07:43:43] which: no apptainer in ((null))
[2025-12-02 07:43:43] apptainer is not installed, using version from CVMFS
[2025-12-02 07:43:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 07:43:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-12-02 07:43:44] apptainer works
[2025-12-02 07:43:44] Set ATHENA_PROC_NUMBER=4
[2025-12-02 07:43:44] Set ATHENA_CORE_NUMBER=4
[2025-12-02 07:43:44] Starting ATLAS job with PandaID=6898721174
[2025-12-02 07:43:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 23:31:37]  *** The last 200 lines of the pilot log: ***
[2025-12-02 23:31:37] 2025-12-02 22:29:55,129 | INFO     | time since job start (56756s) is within the limit (172800.0s)
[2025-12-02 23:31:37] 2025-12-02 22:29:55,748 | INFO     | monitor loop #3812: job 0:6898721174 is in state 'finished'
[2025-12-02 23:31:37] 2025-12-02 22:29:55,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 23:31:37] 2025-12-02 22:29:56,374 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 23:31:37] 2025-12-02 22:29:56,395 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2694.098203125001
[2025-12-02 23:31:37] 2025-12-02 22:29:56,421 | INFO     | using path: /scratch/boinc/var/slot104/slots/0/PanDA_Pilot-6898721174/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 23:31:37] 2025-12-02 22:29:56,422 | INFO     | extracted standard info from prmon json
[2025-12-02 23:31:37] 2025-12-02 22:29:56,422 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 23:31:37] 2025-12-02 22:29:56,422 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 23:31:37] 2025-12-02 22:29:56,439 | INFO     | fitting pss+swap vs Time
[2025-12-02 23:31:37] 2025-12-02 22:29:56,441 | INFO     | sum of square deviations: 249417446082.49875
[2025-12-02 23:31:37] 2025-12-02 22:29:56,461 | INFO     | sum of deviations: 615935151331.244
[2025-12-02 23:31:37] 2025-12-02 22:29:56,462 | INFO     | mean x: 1764686208.5010753
[2025-12-02 23:31:37] 2025-12-02 22:29:56,462 | INFO     | mean y: 2273248.2548387097
[2025-12-02 23:31:37] 2025-12-02 22:29:56,462 | INFO     | intersect: -4355610628.584109
[2025-12-02 23:31:37] 2025-12-02 22:29:56,463 | INFO     | chi2: 4.087402874185594
[2025-12-02 23:31:37] 2025-12-02 22:29:56,464 | INFO     | sum of square deviations: 245416171364.9991
[2025-12-02 23:31:37] 2025-12-02 22:29:56,485 | INFO     | sum of deviations: 804964407645.2341
[2025-12-02 23:31:37] 2025-12-02 22:29:56,485 | INFO     | mean x: 1764686056.001081
[2025-12-02 23:31:37] 2025-12-02 22:29:56,486 | INFO     | mean y: 2280449.7654054053
[2025-12-02 23:31:37] 2025-12-02 22:29:56,486 | INFO     | intersect: -5785885251.980627
[2025-12-02 23:31:37] 2025-12-02 22:29:56,487 | INFO     | chi2: 2.0939220699322223
[2025-12-02 23:31:37] 2025-12-02 22:29:56,487 | INFO     | current chi2=2.0939220699322223 (change=48.77133146926625 %)
[2025-12-02 23:31:37] 2025-12-02 22:29:56,488 | INFO     | sum of square deviations: 241457920709.9987
[2025-12-02 23:31:37] 2025-12-02 22:29:56,508 | INFO     | sum of deviations: 833598436798.1367
[2025-12-02 23:31:37] 2025-12-02 22:29:56,508 | INFO     | mean x: 1764685903.501087
[2025-12-02 23:31:37] 2025-12-02 22:29:56,508 | INFO     | mean y: 2281548.863043478
[2025-12-02 23:31:37] 2025-12-02 22:29:56,508 | INFO     | intersect: -6090040485.024571
[2025-12-02 23:31:37] 2025-12-02 22:29:56,509 | INFO     | chi2: 1.957604477549105
[2025-12-02 23:31:37] 2025-12-02 22:29:56,510 | INFO     | current chi2=1.957604477549105 (change=6.510155957596344 %)
[2025-12-02 23:31:37] 2025-12-02 22:29:56,510 | INFO     | right removable region: 919
[2025-12-02 23:31:37] 2025-12-02 22:29:56,511 | INFO     | sum of square deviations: 245416170754.9991
[2025-12-02 23:31:37] 2025-12-02 22:29:56,532 | INFO     | sum of deviations: 447826445324.79987
[2025-12-02 23:31:37] 2025-12-02 22:29:56,533 | INFO     | mean x: 1764686361.001081
[2025-12-02 23:31:37] 2025-12-02 22:29:56,533 | INFO     | mean y: 2279643.2010810813
[2025-12-02 23:31:37] 2025-12-02 22:29:56,533 | INFO     | intersect: -3217855434.813833
[2025-12-02 23:31:37] 2025-12-02 22:29:56,534 | INFO     | chi2: 2.225815411302686
[2025-12-02 23:31:37] 2025-12-02 22:29:56,534 | INFO     | current chi2=2.225815411302686 (change=45.54450638178957 %)
[2025-12-02 23:31:37] 2025-12-02 22:29:56,535 | INFO     | sum of square deviations: 241457919489.9987
[2025-12-02 23:31:37] 2025-12-02 22:29:56,556 | INFO     | sum of deviations: 437259070268.2682
[2025-12-02 23:31:37] 2025-12-02 22:29:56,556 | INFO     | mean x: 1764686513.501087
[2025-12-02 23:31:37] 2025-12-02 22:29:56,556 | INFO     | mean y: 2280049.7326086955
[2025-12-02 23:31:37] 2025-12-02 22:29:56,556 | INFO     | intersect: -3193412126.520066
[2025-12-02 23:31:37] 2025-12-02 22:29:56,557 | INFO     | chi2: 2.2243883946921534
[2025-12-02 23:31:37] 2025-12-02 22:29:56,557 | INFO     | current chi2=2.2243883946921534 (change=0.06411208239848573 %)
[2025-12-02 23:31:37] 2025-12-02 22:29:56,557 | INFO     | left removable region: 20
[2025-12-02 23:31:37] 2025-12-02 22:29:56,558 | INFO     | sum of square deviations: 225297839810.99905
[2025-12-02 23:31:37] 2025-12-02 22:29:56,578 | INFO     | sum of deviations: 650632089295.9263
[2025-12-02 23:31:37] 2025-12-02 22:29:56,578 | INFO     | mean x: 1764686483.0011125
[2025-12-02 23:31:37] 2025-12-02 22:29:56,578 | INFO     | mean y: 2288546.0745272525
[2025-12-02 23:31:37] 2025-12-02 22:29:56,578 | INFO     | intersect: -5093906137.152261
[2025-12-02 23:31:37] 2025-12-02 22:29:56,579 | INFO     | chi2: 0.0729800716899002
[2025-12-02 23:31:37] 2025-12-02 22:29:56,579 | INFO     | current memory leak: 2.89 B/s (using 899 data points, chi2=0.07)
[2025-12-02 23:31:37] 2025-12-02 22:29:56,581 | INFO     | could have reported an average CPU frequency of 2688 MHz (35 samples)
[2025-12-02 23:31:37] 2025-12-02 22:29:56,581 | INFO     | ..............................
[2025-12-02 23:31:37] 2025-12-02 22:29:56,581 | INFO     | . Timing measurements:
[2025-12-02 23:31:37] 2025-12-02 22:29:56,581 | INFO     | . get job = 0 s
[2025-12-02 23:31:37] 2025-12-02 22:29:56,581 | INFO     | . initial setup = 1 s
[2025-12-02 23:31:37] 2025-12-02 22:29:56,581 | INFO     | . payload setup = 9 s
[2025-12-02 23:31:37] 2025-12-02 22:29:56,582 | INFO     | . stage-in = 0 s
[2025-12-02 23:31:37] 2025-12-02 22:29:56,582 | INFO     | . payload execution = 56713 s
[2025-12-02 23:31:37] 2025-12-02 22:29:56,582 | INFO     | . stage-out = 2 s
[2025-12-02 23:31:37] 2025-12-02 22:29:56,582 | INFO     | . log creation = 0 s
[2025-12-02 23:31:37] 2025-12-02 22:29:56,582 | INFO     | ..............................
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | 
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | job summary report
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | --------------------------------------------------
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | PanDA job id: 6898721174
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | task id: 47556161
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | errors: (none)
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | pilot state: finished 
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | transexitcode: 0
[2025-12-02 23:31:37] 2025-12-02 22:29:57,022 | INFO     | exeerrorcode: 0
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | exeerrordiag: 
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | exitcode: 0
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | exitmsg: OK
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | cpuconsumptiontime: 227648 s
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | nevents: 1000
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | neventsw: 0
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | pid: 1156707
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | pgrp: 1156707
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | corecount: 4
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | event service: False
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | sizes: {0: 2284100, 1: 2284355, 8: 2284617, 12: 2284645, 56727: 2337825, 56730: 2346843, 56731: 2347055, 56740: 2347301}
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | --------------------------------------------------
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | 
[2025-12-02 23:31:37] 2025-12-02 22:29:57,023 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2025-12-02 23:31:37] 2025-12-02 22:29:57,064 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,064 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,064 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,065 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,065 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,065 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,065 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,065 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,066 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 23:31:37] 2025-12-02 22:29:57,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,066 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 23:31:37] 2025-12-02 22:29:57,067 | INFO     | job 6898721174 has completed (purged errors)
[2025-12-02 23:31:37] 2025-12-02 22:29:57,067 | INFO     | overall cleanup function is called
[2025-12-02 23:31:37] 2025-12-02 22:29:58,083 | INFO     | --- collectZombieJob: --- 10, [1156707]
[2025-12-02 23:31:37] 2025-12-02 22:29:58,084 | INFO     | zombie collector waiting for pid 1156707
[2025-12-02 23:31:37] 2025-12-02 22:29:58,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 23:31:37] 2025-12-02 22:29:58,084 | INFO     | collected zombie processes
[2025-12-02 23:31:37] 2025-12-02 22:29:58,084 | INFO     | will attempt to kill all subprocesses of pid=1156707
[2025-12-02 23:31:37] 2025-12-02 22:29:58,932 | INFO     | process IDs to be killed: [1156707] (in reverse order)
[2025-12-02 23:31:37] 2025-12-02 22:29:59,207 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 23:31:37] 2025-12-02 22:29:59,207 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 23:31:37] 2025-12-02 22:29:59,255 | INFO     | did not find any defunct processes belonging to 1156707
[2025-12-02 23:31:37] 2025-12-02 22:29:59,304 | INFO     | did not find any defunct processes belonging to 1156707
[2025-12-02 23:31:37] 2025-12-02 22:29:59,306 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 23:31:37] 2025-12-02 22:29:59,306 | INFO     | ready for new job
[2025-12-02 23:31:37] 2025-12-02 22:29:59,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 23:31:37] 2025-12-02 22:29:59,315 | INFO     | ***************************************
[2025-12-02 23:31:37] 2025-12-02 22:29:59,315 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 23:31:37] 2025-12-02 22:29:59,315 | INFO     | ***************************************
[2025-12-02 23:31:37] 2025-12-02 22:29:59,315 | INFO     | 
[2025-12-02 23:31:37] 2025-12-02 22:29:59,326 | INFO     | architecture information:
[2025-12-02 23:31:37] 2025-12-02 22:29:59,327 | INFO     | executing command: cat /etc/os-release
[2025-12-02 23:31:37] 2025-12-02 22:29:59,353 | INFO     | cat /etc/os-release:
[2025-12-02 23:31:37] NAME="CentOS Linux"
[2025-12-02 23:31:37] VERSION="7 (Core)"
[2025-12-02 23:31:37] ID="centos"
[2025-12-02 23:31:37] ID_LIKE="rhel fedora"
[2025-12-02 23:31:37] VERSION_ID="7"
[2025-12-02 23:31:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 23:31:37] ANSI_COLOR="0;31"
[2025-12-02 23:31:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 23:31:37] HOME_URL="https://www.centos.org/"
[2025-12-02 23:31:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 23:31:37] 
[2025-12-02 23:31:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 23:31:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 23:31:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 23:31:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 23:31:37] 
[2025-12-02 23:31:37] 2025-12-02 22:29:59,354 | INFO     | ***************************************
[2025-12-02 23:31:37] 2025-12-02 22:29:59,856 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2025-12-02 23:31:37] 2025-12-02 22:29:59,883 | INFO     | sufficient remaining disk space (3159141384192 B)
[2025-12-02 23:31:37] 2025-12-02 22:29:59,883 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 23:31:37] 2025-12-02 22:29:59,883 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 23:31:37] 2025-12-02 22:29:59,884 | INFO     | update_server=False
[2025-12-02 23:31:37] 2025-12-02 22:29:59,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 23:31:37] 2025-12-02 22:29:59,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 23:31:37] 2025-12-02 22:29:59,885 | INFO     | aborting loop
[2025-12-02 23:31:37] 2025-12-02 22:29:59,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 23:31:37] 2025-12-02 22:30:00,220 | INFO     | all job control threads have been joined
[2025-12-02 23:31:37] 2025-12-02 22:30:00,784 | INFO     | all data control threads have been joined
[2025-12-02 23:31:37] 2025-12-02 22:30:00,884 | INFO     | [job] retrieve thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:00,888 | INFO     | [job] job monitor thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:00,981 | INFO     | [data] copytool_in thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:01,078 | INFO     | all payload control threads have been joined
[2025-12-02 23:31:37] 2025-12-02 22:30:01,225 | INFO     | [job] control thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:01,275 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:01,287 | INFO     | [job] validate thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:01,430 | INFO     | [payload] failed_post thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:01,662 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:01,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 23:31:37] 2025-12-02 22:30:01,718 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:01,789 | INFO     | [data] control thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:01,795 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:01,887 | INFO     | [data] copytool_out thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:02,084 | INFO     | [payload] control thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:02,471 | INFO     | [payload] validate_post thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:02,707 | INFO     | [job] queue monitor thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:03,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 23:31:37] 2025-12-02 22:30:07,075 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 23:31:37] 2025-12-02 22:30:29,231 | INFO     | PID=1149336 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-02 23:31:37] 2025-12-02 22:30:29,232 | INFO     | .. there are 8 such processes running
[2025-12-02 23:31:37] 2025-12-02 22:30:29,232 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 23:31:37] 2025-12-02 22:30:29,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 23:31:37] 2025-12-02 22:30:29,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 23:31:37] 2025-12-02 22:30:32,206 | INFO     | [monitor] cgroup control has ended
[2025-12-02 23:31:37] 2025-12-02 22:30:33,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22821876004672)>', '<ExcThread(monitor, started 22821428233984)>']
[2025-12-02 23:31:37] 2025-12-02 22:30:33,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 23:31:37] 2025-12-02 22:30:33,252 | INFO     | [monitor] control thread has ended
[2025-12-02 23:31:37] 2025-12-02 22:30:38,187 | INFO     | all workflow threads have been joined
[2025-12-02 23:31:37] 2025-12-02 22:30:38,187 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 23:31:37] 2025-12-02 22:30:38,187 | INFO     | traces error code: 0
[2025-12-02 23:31:37] 2025-12-02 22:30:38,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 23:31:37] 2025-12-02 22:30:38,387 [wrapper] ==== pilot stdout END ====
[2025-12-02 23:31:37] 2025-12-02 22:30:38,391 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 23:31:37] 2025-12-02 22:30:38,395 [wrapper] pilotpid: 1149336
[2025-12-02 23:31:37] 2025-12-02 22:30:38,399 [wrapper] Pilot exit status: 0
[2025-12-02 23:31:37] 2025-12-02 22:30:38,413 [wrapper] pandaids: 6898721174
[2025-12-02 23:31:37] 2025-12-02 22:30:38,598 [wrapper] cleanup supervisor_pilot 2623745 1149337
[2025-12-02 23:31:37] 2025-12-02 22:30:38,603 [wrapper] Test setup, not cleaning
[2025-12-02 23:31:37] 2025-12-02 22:30:38,606 [wrapper] apfmon messages muted
[2025-12-02 23:31:37] 2025-12-02 22:30:38,610 [wrapper] ==== wrapper stdout END ====
[2025-12-02 23:31:37] 2025-12-02 22:30:38,613 [wrapper] ==== wrapper stderr END ====
[2025-12-02 23:31:37]  *** Error codes and diagnostics ***
[2025-12-02 23:31:37]     "exeErrorCode": 0,
[2025-12-02 23:31:37]     "exeErrorDiag": "",
[2025-12-02 23:31:37]     "pilotErrorCode": 0,
[2025-12-02 23:31:37]     "pilotErrorDiag": "",
[2025-12-02 23:31:37]  *** Listing of results directory ***
[2025-12-02 23:31:37] total 1313200
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc    576529 Nov 26 23:16 pilot3.tar.gz
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc      5112 Nov 26 23:26 queuedata.json
[2025-12-02 23:31:37] -rwx------ 1 boinc boinc     36292 Nov 26 23:29 runpilot2-wrapper.sh
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc       100 Dec  2 07:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 23:31:37] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 07:43 run_atlas
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc       105 Dec  2 07:43 job.xml
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc      6688 Dec  2 07:43 init_data.xml
[2025-12-02 23:31:37] -rw-r--r-- 2 boinc boinc 409074970 Dec  2 07:43 EVNT.47483658._002701.pool.root.1
[2025-12-02 23:31:37] drwxrwx--x 2 boinc boinc      4096 Dec  2 07:43 shared
[2025-12-02 23:31:37] -rw-r--r-- 2 boinc boinc    590105 Dec  2 07:43 input.tar.gz
[2025-12-02 23:31:37] -rw-r--r-- 2 boinc boinc     15847 Dec  2 07:43 start_atlas.sh
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc         0 Dec  2 07:43 boinc_lockfile
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc      2786 Dec  2 07:43 pandaJob.out
[2025-12-02 23:31:37] -rw------- 1 boinc boinc    990257 Dec  2 07:43 agis_schedconf.cvmfs.json
[2025-12-02 23:31:37] drwx------ 5 boinc boinc      4096 Dec  2 07:43 pilot3
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc       532 Dec  2 23:21 boinc_task_state.xml
[2025-12-02 23:31:37] -rw------- 1 boinc boinc 912760672 Dec  2 23:29 HITS.47556161._006835.pool.root.1
[2025-12-02 23:31:37] -rw------- 1 boinc boinc      1039 Dec  2 23:29 memory_monitor_summary.json
[2025-12-02 23:31:37] -rw------- 1 boinc boinc   1516240 Dec  2 23:29 agis_ddmendpoints.agis.ALL.json
[2025-12-02 23:31:37] -rw------- 1 boinc boinc   1685838 Dec  2 23:29 log.47556161._006835.job.log.tgz.1
[2025-12-02 23:31:37] -rw------- 1 boinc boinc        95 Dec  2 23:29 pilot_heartbeat.json
[2025-12-02 23:31:37] -rw------- 1 boinc boinc      8590 Dec  2 23:29 heartbeat.json
[2025-12-02 23:31:37] -rw------- 1 boinc boinc      4836 Dec  2 23:30 pilotlog.txt
[2025-12-02 23:31:37] -rw------- 1 boinc boinc   7800112 Dec  2 23:30 log.47556161._006835.job.log.1
[2025-12-02 23:31:37] -rw------- 1 boinc boinc       353 Dec  2 23:30 output.list
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc       620 Dec  2 23:30 runtime_log
[2025-12-02 23:31:37] -rw------- 1 boinc boinc   9502720 Dec  2 23:30 result.tar.gz
[2025-12-02 23:31:37] -rw------- 1 boinc boinc       670 Dec  2 23:30 v7PODmhBdi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuLNKDmiQXdVn.diag
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc      9223 Dec  2 23:30 runtime_log.err
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc        28 Dec  2 23:31 wrapper_checkpoint.txt
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc      8192 Dec  2 23:31 boinc_mmap_file
[2025-12-02 23:31:37] -rw-r--r-- 1 boinc boinc     21122 Dec  2 23:31 stderr.txt
[2025-12-02 23:31:37] HITS file was successfully produced:
[2025-12-02 23:31:37] -rw------- 1 boinc boinc 912760672 Dec  2 23:29 shared/HITS.pool.root.1
[2025-12-02 23:31:37]  *** Contents of shared directory: ***
[2025-12-02 23:31:37] total 1300740
[2025-12-02 23:31:37] -rw-r--r-- 2 boinc boinc 409074970 Dec  2 07:43 ATLAS.root_0
[2025-12-02 23:31:37] -rw-r--r-- 2 boinc boinc    590105 Dec  2 07:43 input.tar.gz
[2025-12-02 23:31:37] -rw-r--r-- 2 boinc boinc     15847 Dec  2 07:43 start_atlas.sh
[2025-12-02 23:31:37] -rw------- 1 boinc boinc 912760672 Dec  2 23:29 HITS.pool.root.1
[2025-12-02 23:31:37] -rw------- 1 boinc boinc   9502720 Dec  2 23:30 result.tar.gz
23:31:38 (1145342): run_atlas exited; CPU time 230726.640568
23:31:38 (1145342): called boinc_finish(0)

</stderr_txt>
]]>

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