Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:29:05 (3020217): wrapper (7.7.26015): starting
23:29:05 (3020217): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 23:29:05] Arguments: --nthreads 8
[2025-11-27 23:29:05] Threads: 8
[2025-11-27 23:29:05] Checking for CVMFS
[2025-11-27 23:29:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 23:29:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 23:29:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 23:29:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 23:29:07] 2.13.2.0 14352 36768 237272 153397 3 342 29441162 40960000 34161 16776704 0 290033288 99.681 233284071 48632 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 23:29:07] CVMFS is ok
[2025-11-27 23:29:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 23:29:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 23:29:07] Further information can be found at the LHC@home message board.
[2025-11-27 23:29:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 23:29:07] Checking for apptainer binary...
[2025-11-27 23:29:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 23:29:07] Running /usr/bin/apptainer --version
[2025-11-27 23:29:07] apptainer version 1.4.4-1.el9
[2025-11-27 23:29:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 23:29:08] c-208-36.aglt2.org
[2025-11-27 23:29:08] apptainer works
[2025-11-27 23:29:08] Set ATHENA_PROC_NUMBER=8
[2025-11-27 23:29:08] Set ATHENA_CORE_NUMBER=8
[2025-11-27 23:29:08] Starting ATLAS job with PandaID=6898271203
[2025-11-27 23:29:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 11:10:10]  *** The last 200 lines of the pilot log: ***
[2025-11-28 11:10:10] 2025-11-28 16:00:55,592 | INFO     | this job has now completed (state=finished)
[2025-11-28 11:10:10] 2025-11-28 16:00:55,592 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-28 11:10:10] 2025-11-28 16:00:55,592 | INFO     | log transfer has been attempted: DONE
[2025-11-28 11:10:10] 2025-11-28 16:00:55,592 | INFO     | job 6898271203 has finished - writing final server update
[2025-11-28 11:10:10] 2025-11-28 16:00:55,592 | INFO     | total number of processed events: 1000 (read)
[2025-11-28 11:10:10] 2025-11-28 16:00:55,667 | INFO     | executing command: lscpu
[2025-11-28 11:10:10] 2025-11-28 16:00:55,725 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-28 11:10:10] 2025-11-28 16:00:56,268 | INFO     | monitor loop #2427: job 0:6898271203 is in state 'finished'
[2025-11-28 11:10:10] 2025-11-28 16:00:56,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:10:10] 2025-11-28 16:00:56,641 | INFO     | time since job start (41412s) is within the limit (172800.0s)
[2025-11-28 11:10:10] 2025-11-28 16:00:56,641 | INFO     | 41421s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-28 11:10:10] 2025-11-28 16:00:58,678 | INFO     | time since job start (41414s) is within the limit (172800.0s)
[2025-11-28 11:10:10] 2025-11-28 16:00:58,798 | INFO     | monitor loop #2428: job 0:6898271203 is in state 'finished'
[2025-11-28 11:10:10] 2025-11-28 16:00:58,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:10:10] 2025-11-28 16:01:00,687 | INFO     | time since job start (41416s) is within the limit (172800.0s)
[2025-11-28 11:10:10] 2025-11-28 16:01:01,319 | INFO     | monitor loop #2429: job 0:6898271203 is in state 'finished'
[2025-11-28 11:10:10] 2025-11-28 16:01:01,319 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:10:10] 2025-11-28 16:01:01,656 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 11:10:10] 2025-11-28 16:01:01,660 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3765.7958359374993
[2025-11-28 11:10:10] 2025-11-28 16:01:01,683 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6898271203/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 11:10:10] 2025-11-28 16:01:01,683 | INFO     | extracted standard info from prmon json
[2025-11-28 11:10:10] 2025-11-28 16:01:01,683 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 11:10:10] 2025-11-28 16:01:01,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 11:10:10] 2025-11-28 16:01:01,690 | INFO     | fitting pss+swap vs Time
[2025-11-28 11:10:10] 2025-11-28 16:01:01,691 | INFO     | sum of square deviations: 95796648815.28256
[2025-11-28 11:10:10] 2025-11-28 16:01:01,696 | INFO     | sum of deviations: 2015174932607.5005
[2025-11-28 11:10:10] 2025-11-28 16:01:01,697 | INFO     | mean x: 1764325017.368343
[2025-11-28 11:10:10] 2025-11-28 16:01:01,697 | INFO     | mean y: 2711374.5562130176
[2025-11-28 11:10:10] 2025-11-28 16:01:01,697 | INFO     | intersect: -37111567589.71771
[2025-11-28 11:10:10] 2025-11-28 16:01:01,697 | INFO     | chi2: 28.972501165628156
[2025-11-28 11:10:10] 2025-11-28 16:01:01,698 | INFO     | sum of square deviations: 93687991990.63506
[2025-11-28 11:10:10] 2025-11-28 16:01:01,703 | INFO     | sum of deviations: 2231455982456.7505
[2025-11-28 11:10:10] 2025-11-28 16:01:01,703 | INFO     | mean x: 1764324864.910581
[2025-11-28 11:10:10] 2025-11-28 16:01:01,703 | INFO     | mean y: 2727017.795827124
[2025-11-28 11:10:10] 2025-11-28 16:01:01,703 | INFO     | intersect: -42019875784.87128
[2025-11-28 11:10:10] 2025-11-28 16:01:01,703 | INFO     | chi2: 25.853234349328492
[2025-11-28 11:10:10] 2025-11-28 16:01:01,704 | INFO     | current chi2=25.853234349328492 (change=10.766301461056598 %)
[2025-11-28 11:10:10] 2025-11-28 16:01:01,704 | INFO     | right removable region: 670
[2025-11-28 11:10:10] 2025-11-28 16:01:01,704 | INFO     | sum of square deviations: 93685613101.81203
[2025-11-28 11:10:10] 2025-11-28 16:01:01,709 | INFO     | sum of deviations: 1736715456730.0286
[2025-11-28 11:10:10] 2025-11-28 16:01:01,710 | INFO     | mean x: 1764325169.9120715
[2025-11-28 11:10:10] 2025-11-28 16:01:01,710 | INFO     | mean y: 2731496.1698956783
[2025-11-28 11:10:10] 2025-11-28 16:01:01,710 | INFO     | intersect: -32703792929.882706
[2025-11-28 11:10:10] 2025-11-28 16:01:01,710 | INFO     | chi2: 23.30820497322348
[2025-11-28 11:10:10] 2025-11-28 16:01:01,710 | INFO     | current chi2=23.30820497322348 (change=19.550594406825244 %)
[2025-11-28 11:10:10] 2025-11-28 16:01:01,710 | INFO     | left removable region: 10
[2025-11-28 11:10:10] 2025-11-28 16:01:01,711 | INFO     | sum of square deviations: 89153729290.9456
[2025-11-28 11:10:10] 2025-11-28 16:01:01,716 | INFO     | sum of deviations: 1747612122335.9788
[2025-11-28 11:10:10] 2025-11-28 16:01:01,716 | INFO     | mean x: 1764325139.509091
[2025-11-28 11:10:10] 2025-11-28 16:01:01,716 | INFO     | mean y: 2770178.66969697
[2025-11-28 11:10:10] 2025-11-28 16:01:01,716 | INFO     | intersect: -34581941263.808876
[2025-11-28 11:10:10] 2025-11-28 16:01:01,716 | INFO     | chi2: 14.716347225122847
[2025-11-28 11:10:10] 2025-11-28 16:01:01,716 | INFO     | current memory leak: 19.60 B/s (using 660 data points, chi2=14.72)
[2025-11-28 11:10:10] 2025-11-28 16:01:01,717 | INFO     | could have reported an average CPU frequency of 3775 MHz (26 samples)
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | ..............................
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | . Timing measurements:
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | . get job = 0 s
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | . initial setup = 9 s
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | . payload setup = 68 s
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | . stage-in = 0 s
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | . payload execution = 41251 s
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | . stage-out = 6 s
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | . log creation = 0 s
[2025-11-28 11:10:10] 2025-11-28 16:01:01,718 | INFO     | ..............................
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | 
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | job summary report
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | --------------------------------------------------
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | PanDA job id: 6898271203
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | task id: 47556161
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | errors: (none)
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | pilot state: finished 
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | transexitcode: 0
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | exeerrorcode: 0
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | exeerrordiag: 
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | exitcode: 0
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | exitmsg: OK
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | cpuconsumptiontime: 139150 s
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | nevents: 1000
[2025-11-28 11:10:10] 2025-11-28 16:01:02,253 | INFO     | neventsw: 0
[2025-11-28 11:10:10] 2025-11-28 16:01:02,254 | INFO     | pid: 3036478
[2025-11-28 11:10:10] 2025-11-28 16:01:02,254 | INFO     | pgrp: 3036478
[2025-11-28 11:10:10] 2025-11-28 16:01:02,254 | INFO     | corecount: 8
[2025-11-28 11:10:10] 2025-11-28 16:01:02,254 | INFO     | event service: False
[2025-11-28 11:10:10] 2025-11-28 16:01:02,254 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 23: 2284371, 33: 2284399, 34: 2284717, 44: 2284873, 41323: 2328500, 41331: 2337494, 41332: 2337550, 41338: 2337796}
[2025-11-28 11:10:10] 2025-11-28 16:01:02,254 | INFO     | --------------------------------------------------
[2025-11-28 11:10:10] 2025-11-28 16:01:02,254 | INFO     | 
[2025-11-28 11:10:10] 2025-11-28 16:01:02,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-28 11:10:10] 2025-11-28 16:01:02,294 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,295 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,295 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,295 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,296 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,296 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,296 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,296 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,296 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,296 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | job 6898271203 has completed (purged errors)
[2025-11-28 11:10:10] 2025-11-28 16:01:02,297 | INFO     | overall cleanup function is called
[2025-11-28 11:10:10] 2025-11-28 16:01:03,361 | INFO     | --- collectZombieJob: --- 10, [3036478]
[2025-11-28 11:10:10] 2025-11-28 16:01:03,361 | INFO     | zombie collector waiting for pid 3036478
[2025-11-28 11:10:10] 2025-11-28 16:01:03,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 11:10:10] 2025-11-28 16:01:03,361 | INFO     | collected zombie processes
[2025-11-28 11:10:10] 2025-11-28 16:01:03,361 | INFO     | will attempt to kill all subprocesses of pid=3036478
[2025-11-28 11:10:10] 2025-11-28 16:01:04,288 | INFO     | process IDs to be killed: [3036478] (in reverse order)
[2025-11-28 11:10:10] 2025-11-28 16:01:04,530 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 11:10:10] 2025-11-28 16:01:04,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 11:10:10] 2025-11-28 16:01:04,636 | INFO     | did not find any defunct processes belonging to 3036478
[2025-11-28 11:10:10] 2025-11-28 16:01:04,752 | INFO     | did not find any defunct processes belonging to 3036478
[2025-11-28 11:10:10] 2025-11-28 16:01:04,765 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 11:10:10] 2025-11-28 16:01:04,765 | INFO     | ready for new job
[2025-11-28 11:10:10] 2025-11-28 16:01:04,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 11:10:10] 2025-11-28 16:01:04,768 | INFO     | ***************************************
[2025-11-28 11:10:10] 2025-11-28 16:01:04,768 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 11:10:10] 2025-11-28 16:01:04,768 | INFO     | ***************************************
[2025-11-28 11:10:10] 2025-11-28 16:01:04,768 | INFO     | 
[2025-11-28 11:10:10] 2025-11-28 16:01:05,016 | INFO     | architecture information:
[2025-11-28 11:10:10] 2025-11-28 16:01:05,113 | INFO     | executing command: cat /etc/os-release
[2025-11-28 11:10:10] 2025-11-28 16:01:05,166 | INFO     | cat /etc/os-release:
[2025-11-28 11:10:10] NAME="CentOS Linux"
[2025-11-28 11:10:10] VERSION="7 (Core)"
[2025-11-28 11:10:10] ID="centos"
[2025-11-28 11:10:10] ID_LIKE="rhel fedora"
[2025-11-28 11:10:10] VERSION_ID="7"
[2025-11-28 11:10:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 11:10:10] ANSI_COLOR="0;31"
[2025-11-28 11:10:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 11:10:10] HOME_URL="https://www.centos.org/"
[2025-11-28 11:10:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 11:10:10] 
[2025-11-28 11:10:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 11:10:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 11:10:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 11:10:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 11:10:10] 
[2025-11-28 11:10:10] 2025-11-28 16:01:05,166 | INFO     | ***************************************
[2025-11-28 11:10:10] 2025-11-28 16:01:05,669 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-28 11:10:10] 2025-11-28 16:01:05,699 | INFO     | sufficient remaining disk space (149236482048 B)
[2025-11-28 11:10:10] 2025-11-28 16:01:05,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 11:10:10] 2025-11-28 16:01:05,700 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 11:10:10] 2025-11-28 16:01:05,700 | INFO     | update_server=False
[2025-11-28 11:10:10] 2025-11-28 16:01:05,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 11:10:10] 2025-11-28 16:01:05,706 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:10:10] 2025-11-28 16:01:05,706 | INFO     | aborting loop
[2025-11-28 11:10:10] 2025-11-28 16:01:05,707 | INFO     | all job control threads have been joined
[2025-11-28 11:10:10] 2025-11-28 16:01:05,816 | INFO     | all data control threads have been joined
[2025-11-28 11:10:10] 2025-11-28 16:01:05,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 11:10:10] 2025-11-28 16:01:06,105 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 11:10:10] 2025-11-28 16:01:06,523 | INFO     | all payload control threads have been joined
[2025-11-28 11:10:10] 2025-11-28 16:01:06,706 | INFO     | [job] retrieve thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:06,713 | INFO     | [job] job monitor thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:06,714 | INFO     | [job] control thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:06,822 | INFO     | [data] control thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:06,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:06,837 | INFO     | [data] copytool_in thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:06,938 | INFO     | [payload] failed_post thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:07,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:10:10] 2025-11-28 16:01:07,048 | INFO     | [job] validate thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:07,350 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:07,507 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:07,509 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:07,537 | INFO     | [payload] control thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:07,885 | INFO     | [data] copytool_out thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:08,010 | INFO     | [job] queue monitor thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:08,026 | INFO     | [payload] validate_post thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:10,114 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 11:10:10] 2025-11-28 16:01:34,299 | INFO     | PID=3025819 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 11:10:10] 2025-11-28 16:01:34,300 | INFO     | .. there are 38 such processes running
[2025-11-28 11:10:10] 2025-11-28 16:01:34,300 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 11:10:10] 2025-11-28 16:01:34,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 11:10:10] 2025-11-28 16:01:34,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 11:10:10] 2025-11-28 16:01:58,777 | INFO     | [monitor] cgroup control has ended
[2025-11-28 11:10:10] 2025-11-28 16:02:00,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140583268820800)>', '<ExcThread(monitor, started 140582768850688)>']
[2025-11-28 11:10:10] 2025-11-28 16:02:01,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 11:10:10] 2025-11-28 16:02:01,485 | INFO     | [monitor] control thread has ended
[2025-11-28 11:10:10] 2025-11-28 16:02:05,531 | INFO     | all workflow threads have been joined
[2025-11-28 11:10:10] 2025-11-28 16:02:05,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 11:10:10] 2025-11-28 16:02:05,531 | INFO     | traces error code: 0
[2025-11-28 11:10:10] 2025-11-28 16:02:05,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 11:10:10] 2025-11-28 16:02:06,944 [wrapper] ==== pilot stdout END ====
[2025-11-28 11:10:10] 2025-11-28 16:02:06,952 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 11:10:10] 2025-11-28 16:02:06,954 [wrapper] pilotpid: 3025819
[2025-11-28 11:10:10] 2025-11-28 16:02:06,956 [wrapper] Pilot exit status: 0
[2025-11-28 11:10:10] 2025-11-28 16:02:06,974 [wrapper] pandaids: 6898271203
[2025-11-28 11:10:10] 2025-11-28 16:02:07,085 [wrapper] cleanup supervisor_pilot 2001426 3025820
[2025-11-28 11:10:10] 2025-11-28 16:02:07,094 [wrapper] Test setup, not cleaning
[2025-11-28 11:10:10] 2025-11-28 16:02:07,101 [wrapper] apfmon messages muted
[2025-11-28 11:10:10] 2025-11-28 16:02:07,119 [wrapper] ==== wrapper stdout END ====
[2025-11-28 11:10:10] 2025-11-28 16:02:07,143 [wrapper] ==== wrapper stderr END ====
[2025-11-28 11:10:10]  *** Error codes and diagnostics ***
[2025-11-28 11:10:10]     "exeErrorCode": 0,
[2025-11-28 11:10:10]     "exeErrorDiag": "",
[2025-11-28 11:10:10]     "pilotErrorCode": 0,
[2025-11-28 11:10:10]     "pilotErrorDiag": "",
[2025-11-28 11:10:10]  *** Listing of results directory ***
[2025-11-28 11:10:10] total 1303932
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas    576529 Nov 26 09:19 pilot3.tar.gz
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas      5112 Nov 26 09:47 queuedata.json
[2025-11-28 11:10:10] -rwx------. 1 boincer umatlas     36292 Nov 26 09:49 runpilot2-wrapper.sh
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas       100 Nov 27 23:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 11:10:10] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 23:29 run_atlas
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas       105 Nov 27 23:29 job.xml
[2025-11-28 11:10:10] -rw-r--r--. 2 boincer umatlas 409169610 Nov 27 23:29 EVNT.47483658._002526.pool.root.1
[2025-11-28 11:10:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 23:29 start_atlas.sh
[2025-11-28 11:10:10] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 23:29 shared
[2025-11-28 11:10:10] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 23:29 input.tar.gz
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas         0 Nov 27 23:29 boinc_lockfile
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 23:29 pandaJob.out
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas        57 Nov 27 23:29 setup.sh.local
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas    991858 Nov 27 23:30 agis_schedconf.cvmfs.json
[2025-11-28 11:10:10] drwx------. 5 boincer umatlas      4096 Nov 27 23:30 pilot3
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas       533 Nov 28 10:48 boinc_task_state.xml
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas 908044540 Nov 28 11:00 HITS.47556161._005082.pool.root.1
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas      1058 Nov 28 11:00 memory_monitor_summary.json
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas   1516240 Nov 28 11:00 agis_ddmendpoints.agis.ALL.json
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas   1881767 Nov 28 11:00 log.47556161._005082.job.log.tgz.1
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas      8590 Nov 28 11:01 heartbeat.json
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas        95 Nov 28 11:01 pilot_heartbeat.json
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas      7174 Nov 28 11:01 init_data.xml
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas      4825 Nov 28 11:02 pilotlog.txt
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas   5164584 Nov 28 11:02 log.47556161._005082.job.log.1
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas       353 Nov 28 11:02 output.list
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas       620 Nov 28 11:02 runtime_log
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas   7065600 Nov 28 11:02 result.tar.gz
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas      9343 Nov 28 11:02 runtime_log.err
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas       659 Nov 28 11:02 FTJNDm30Vi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmI2MKDmquUWFm.diag
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas        29 Nov 28 11:10 wrapper_checkpoint.txt
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 11:10 boinc_mmap_file
[2025-11-28 11:10:10] -rw-r--r--. 1 boincer umatlas     21819 Nov 28 11:10 stderr.txt
[2025-11-28 11:10:10] HITS file was successfully produced:
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas 908044540 Nov 28 11:00 shared/HITS.pool.root.1
[2025-11-28 11:10:10]  *** Contents of shared directory: ***
[2025-11-28 11:10:10] total 1293848
[2025-11-28 11:10:10] -rw-r--r--. 2 boincer umatlas 409169610 Nov 27 23:29 ATLAS.root_0
[2025-11-28 11:10:10] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 23:29 start_atlas.sh
[2025-11-28 11:10:10] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 23:29 input.tar.gz
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas 908044540 Nov 28 11:00 HITS.pool.root.1
[2025-11-28 11:10:10] -rw-------. 1 boincer umatlas   7065600 Nov 28 11:02 result.tar.gz
11:10:12 (3020217): run_atlas exited; CPU time 139770.742945
11:10:12 (3020217): called boinc_finish(0)

</stderr_txt>
]]>

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