Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
02:50:10 (3434196): wrapper (7.7.26015): starting
02:50:10 (3434196): wrapper: running run_atlas (--nthreads 12)
[2025-12-02 02:50:10] Arguments: --nthreads 12
[2025-12-02 02:50:10] Threads: 12
[2025-12-02 02:50:10] Checking for CVMFS
[2025-12-02 02:50:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 02:50:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 02:50:13] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 02:50:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 02:50:15] 2.13.1.0 70328 8919 84344 153540 2 81 2236387 4096000 2066 130560 0 10255507 99.944 623718 768 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-12-02 02:50:15] CVMFS is ok
[2025-12-02 02:50:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 02:50:15] Checking for apptainer binary...
[2025-12-02 02:50:15] apptainer is not installed, using version from CVMFS
[2025-12-02 02:50:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 02:50:16] ryzen7
[2025-12-02 02:50:16] apptainer works
[2025-12-02 02:50:16] Set ATHENA_PROC_NUMBER=12
[2025-12-02 02:50:16] Set ATHENA_CORE_NUMBER=12
[2025-12-02 02:50:16] Starting ATLAS job with PandaID=6898271239
[2025-12-02 02:50:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 10:13:28]  *** The last 200 lines of the pilot log: ***
[2025-12-02 10:13:28] 2025-12-02 10:12:32,916 | INFO     | time since job start (26455s) is within the limit (172800.0s)
[2025-12-02 10:13:28] 2025-12-02 10:12:33,154 | INFO     | monitor loop #1954: job 0:6898271239 is in state 'finished'
[2025-12-02 10:13:28] 2025-12-02 10:12:33,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 10:13:28] 2025-12-02 10:12:33,454 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 10:13:28] 2025-12-02 10:12:33,456 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4312.405000000001
[2025-12-02 10:13:28] 2025-12-02 10:12:33,458 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6898271239/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 10:13:28] 2025-12-02 10:12:33,458 | INFO     | extracted standard info from prmon json
[2025-12-02 10:13:28] 2025-12-02 10:12:33,458 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 10:13:28] 2025-12-02 10:12:33,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 10:13:28] 2025-12-02 10:12:33,470 | INFO     | fitting pss+swap vs Time
[2025-12-02 10:13:28] 2025-12-02 10:12:33,470 | INFO     | sum of square deviations: 24653758940.42796
[2025-12-02 10:13:28] 2025-12-02 10:12:33,473 | INFO     | sum of deviations: 433843778387.5591
[2025-12-02 10:13:28] 2025-12-02 10:12:33,473 | INFO     | mean x: 1764657172.060465
[2025-12-02 10:13:28] 2025-12-02 10:12:33,473 | INFO     | mean y: 3414397.7093023257
[2025-12-02 10:13:28] 2025-12-02 10:12:33,473 | INFO     | intersect: -31050086893.32456
[2025-12-02 10:13:28] 2025-12-02 10:12:33,473 | INFO     | chi2: 6.7117099524875306
[2025-12-02 10:13:28] 2025-12-02 10:12:33,478 | INFO     | sum of square deviations: 23803910435.609413
[2025-12-02 10:13:28] 2025-12-02 10:12:33,481 | INFO     | sum of deviations: 602669011962.1741
[2025-12-02 10:13:28] 2025-12-02 10:12:33,481 | INFO     | mean x: 1764657019.5788236
[2025-12-02 10:13:28] 2025-12-02 10:12:33,481 | INFO     | mean y: 3444671.308235294
[2025-12-02 10:13:28] 2025-12-02 10:12:33,481 | INFO     | intersect: -44674260923.26238
[2025-12-02 10:13:28] 2025-12-02 10:12:33,481 | INFO     | chi2: 3.561379477654478
[2025-12-02 10:13:28] 2025-12-02 10:12:33,481 | INFO     | current chi2=3.561379477654478 (change=46.93782206225196 %)
[2025-12-02 10:13:28] 2025-12-02 10:12:33,482 | INFO     | sum of square deviations: 22973726537.740417
[2025-12-02 10:13:28] 2025-12-02 10:12:33,488 | INFO     | sum of deviations: 645076085872.3926
[2025-12-02 10:13:28] 2025-12-02 10:12:33,488 | INFO     | mean x: 1764656867.0880952
[2025-12-02 10:13:28] 2025-12-02 10:12:33,488 | INFO     | mean y: 3452408.1785714286
[2025-12-02 10:13:28] 2025-12-02 10:12:33,489 | INFO     | intersect: -49546103379.34272
[2025-12-02 10:13:28] 2025-12-02 10:12:33,489 | INFO     | chi2: 3.067504698090891
[2025-12-02 10:13:28] 2025-12-02 10:12:33,489 | INFO     | current chi2=3.067504698090891 (change=13.86751349195881 %)
[2025-12-02 10:13:28] 2025-12-02 10:12:33,489 | INFO     | right removable region: 419
[2025-12-02 10:13:28] 2025-12-02 10:12:33,489 | INFO     | sum of square deviations: 23803501125.6094
[2025-12-02 10:13:28] 2025-12-02 10:12:33,496 | INFO     | sum of deviations: 263827954058.73407
[2025-12-02 10:13:28] 2025-12-02 10:12:33,496 | INFO     | mean x: 1764657324.5788236
[2025-12-02 10:13:28] 2025-12-02 10:12:33,496 | INFO     | mean y: 3444860.9482352943
[2025-12-02 10:13:28] 2025-12-02 10:12:33,496 | INFO     | intersect: -19555271695.142895
[2025-12-02 10:13:28] 2025-12-02 10:12:33,497 | INFO     | chi2: 3.8572195221091157
[2025-12-02 10:13:28] 2025-12-02 10:12:33,497 | INFO     | current chi2=3.8572195221091157 (change=42.530002794898316 %)
[2025-12-02 10:13:28] 2025-12-02 10:12:33,497 | INFO     | sum of square deviations: 22973218412.407265
[2025-12-02 10:13:28] 2025-12-02 10:12:33,504 | INFO     | sum of deviations: 227147188151.90045
[2025-12-02 10:13:28] 2025-12-02 10:12:33,504 | INFO     | mean x: 1764657477.0785713
[2025-12-02 10:13:28] 2025-12-02 10:12:33,504 | INFO     | mean y: 3451591.033333333
[2025-12-02 10:13:28] 2025-12-02 10:12:33,504 | INFO     | intersect: -17444560123.039
[2025-12-02 10:13:28] 2025-12-02 10:12:33,504 | INFO     | chi2: 3.7887308083941473
[2025-12-02 10:13:28] 2025-12-02 10:12:33,504 | INFO     | current chi2=3.7887308083941473 (change=1.775598026568084 %)
[2025-12-02 10:13:28] 2025-12-02 10:12:33,505 | INFO     | left removable region: 20
[2025-12-02 10:13:28] 2025-12-02 10:12:33,505 | INFO     | sum of square deviations: 19696952433.433693
[2025-12-02 10:13:28] 2025-12-02 10:12:33,511 | INFO     | sum of deviations: 387782613966.07495
[2025-12-02 10:13:28] 2025-12-02 10:12:33,512 | INFO     | mean x: 1764657446.60401
[2025-12-02 10:13:28] 2025-12-02 10:12:33,512 | INFO     | mean y: 3500725.203007519
[2025-12-02 10:13:28] 2025-12-02 10:12:33,512 | INFO     | intersect: -34738090884.53569
[2025-12-02 10:13:28] 2025-12-02 10:12:33,512 | INFO     | chi2: 0.06914213733448442
[2025-12-02 10:13:28] 2025-12-02 10:12:33,512 | INFO     | current memory leak: 19.69 B/s (using 399 data points, chi2=0.07)
[2025-12-02 10:13:28] 2025-12-02 10:12:33,512 | INFO     | could have reported an average CPU frequency of 4320 MHz (18 samples)
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | ..............................
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | . Timing measurements:
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | . get job = 0 s
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | . initial setup = 2 s
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | . payload setup = 56 s
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | . stage-in = 0 s
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | . payload execution = 26247 s
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | . stage-out = 3 s
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | . log creation = 1 s
[2025-12-02 10:13:28] 2025-12-02 10:12:33,513 | INFO     | ..............................
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | 
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | job summary report
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | --------------------------------------------------
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | PanDA job id: 6898271239
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | task id: 47556161
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | errors: (none)
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | pilot state: finished 
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | transexitcode: 0
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | exeerrorcode: 0
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | exeerrordiag: 
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | exitcode: 0
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | exitmsg: OK
[2025-12-02 10:13:28] 2025-12-02 10:12:34,078 | INFO     | cpuconsumptiontime: 140683 s
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | nevents: 1000
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | neventsw: 0
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | pid: 3444559
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | pgrp: 3444559
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | corecount: 12
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | event service: False
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | sizes: {0: 2284338, 1: 2284338, 12: 2284366, 22: 2284394, 33: 2284422, 44: 2284478, 45: 2284896, 54: 2284924, 26308: 2322131, 26312: 2331171, 26313: 2331227, 26359
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | --------------------------------------------------
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | 
[2025-12-02 10:13:28] 2025-12-02 10:12:34,079 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | job 6898271239 has completed (purged errors)
[2025-12-02 10:13:28] 2025-12-02 10:12:34,219 | INFO     | overall cleanup function is called
[2025-12-02 10:13:28] 2025-12-02 10:12:35,246 | INFO     | --- collectZombieJob: --- 10, [3444559]
[2025-12-02 10:13:28] 2025-12-02 10:12:35,246 | INFO     | zombie collector waiting for pid 3444559
[2025-12-02 10:13:28] 2025-12-02 10:12:35,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 10:13:28] 2025-12-02 10:12:35,246 | INFO     | collected zombie processes
[2025-12-02 10:13:28] 2025-12-02 10:12:35,246 | INFO     | will attempt to kill all subprocesses of pid=3444559
[2025-12-02 10:13:28] 2025-12-02 10:12:35,415 | INFO     | process IDs to be killed: [3444559] (in reverse order)
[2025-12-02 10:13:28] 2025-12-02 10:12:35,476 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 10:13:28] 2025-12-02 10:12:35,476 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 10:13:28] 2025-12-02 10:12:35,478 | INFO     | did not find any defunct processes belonging to 3444559
[2025-12-02 10:13:28] 2025-12-02 10:12:35,480 | INFO     | did not find any defunct processes belonging to 3444559
[2025-12-02 10:13:28] 2025-12-02 10:12:35,486 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 10:13:28] 2025-12-02 10:12:35,486 | INFO     | ready for new job
[2025-12-02 10:13:28] 2025-12-02 10:12:35,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 10:13:28] 2025-12-02 10:12:35,488 | INFO     | ***************************************
[2025-12-02 10:13:28] 2025-12-02 10:12:35,488 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 10:13:28] 2025-12-02 10:12:35,488 | INFO     | ***************************************
[2025-12-02 10:13:28] 2025-12-02 10:12:35,488 | INFO     | 
[2025-12-02 10:13:28] 2025-12-02 10:12:35,506 | INFO     | architecture information:
[2025-12-02 10:13:28] 2025-12-02 10:12:35,510 | INFO     | executing command: cat /etc/os-release
[2025-12-02 10:13:28] 2025-12-02 10:12:35,586 | INFO     | cat /etc/os-release:
[2025-12-02 10:13:28] NAME="CentOS Linux"
[2025-12-02 10:13:28] VERSION="7 (Core)"
[2025-12-02 10:13:28] ID="centos"
[2025-12-02 10:13:28] ID_LIKE="rhel fedora"
[2025-12-02 10:13:28] VERSION_ID="7"
[2025-12-02 10:13:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 10:13:28] ANSI_COLOR="0;31"
[2025-12-02 10:13:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 10:13:28] HOME_URL="https://www.centos.org/"
[2025-12-02 10:13:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 10:13:28] 
[2025-12-02 10:13:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 10:13:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 10:13:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 10:13:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 10:13:28] 
[2025-12-02 10:13:28] 2025-12-02 10:12:35,586 | INFO     | ***************************************
[2025-12-02 10:13:28] 2025-12-02 10:12:36,090 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2025-12-02 10:13:28] 2025-12-02 10:12:36,186 | INFO     | sufficient remaining disk space (75113693184 B)
[2025-12-02 10:13:28] 2025-12-02 10:12:36,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 10:13:28] 2025-12-02 10:12:36,186 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 10:13:28] 2025-12-02 10:12:36,186 | INFO     | update_server=False
[2025-12-02 10:13:28] 2025-12-02 10:12:36,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 10:13:28] 2025-12-02 10:12:36,298 | INFO     | all job control threads have been joined
[2025-12-02 10:13:28] 2025-12-02 10:12:36,610 | INFO     | all data control threads have been joined
[2025-12-02 10:13:28] 2025-12-02 10:12:36,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 10:13:28] 2025-12-02 10:12:36,674 | INFO     | aborting loop
[2025-12-02 10:13:28] 2025-12-02 10:12:36,806 | INFO     | all payload control threads have been joined
[2025-12-02 10:13:28] 2025-12-02 10:12:36,810 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 10:13:28] 2025-12-02 10:12:37,194 | INFO     | [job] retrieve thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:37,302 | INFO     | [job] control thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:37,314 | INFO     | [payload] failed_post thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:37,426 | INFO     | [data] copytool_in thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:37,618 | INFO     | [data] control thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:37,682 | INFO     | [job] job monitor thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:37,738 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:37,810 | INFO     | [payload] control thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:38,094 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:38,318 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:38,506 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:38,586 | INFO     | [job] validate thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:38,650 | INFO     | [payload] validate_post thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:38,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 10:13:28] 2025-12-02 10:12:38,806 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 10:13:28] 2025-12-02 10:12:38,818 | INFO     | [data] copytool_out thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:39,670 | INFO     | [job] queue monitor thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:12:42,822 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 10:13:28] 2025-12-02 10:13:06,171 | INFO     | PID=3437988 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 10:13:28] 2025-12-02 10:13:06,171 | INFO     | .. there are 3 such processes running
[2025-12-02 10:13:28] 2025-12-02 10:13:06,171 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 10:13:28] 2025-12-02 10:13:06,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 10:13:28] 2025-12-02 10:13:06,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 10:13:28] 2025-12-02 10:13:21,970 | INFO     | [monitor] cgroup control has ended
[2025-12-02 10:13:28] 2025-12-02 10:13:22,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960248907584)>', '<ExcThread(monitor, started 139959797266176)>']
[2025-12-02 10:13:28] 2025-12-02 10:13:22,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 10:13:28] 2025-12-02 10:13:22,250 | INFO     | [monitor] control thread has ended
[2025-12-02 10:13:28] 2025-12-02 10:13:27,134 | INFO     | all workflow threads have been joined
[2025-12-02 10:13:28] 2025-12-02 10:13:27,134 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 10:13:28] 2025-12-02 10:13:27,134 | INFO     | traces error code: 0
[2025-12-02 10:13:28] 2025-12-02 10:13:27,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 10:13:28] 2025-12-02 10:13:27,303 [wrapper] ==== pilot stdout END ====
[2025-12-02 10:13:28] 2025-12-02 10:13:27,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 10:13:28] 2025-12-02 10:13:27,342 [wrapper] pilotpid: 3437988
[2025-12-02 10:13:28] 2025-12-02 10:13:27,359 [wrapper] Pilot exit status: 0
[2025-12-02 10:13:28] 2025-12-02 10:13:27,518 [wrapper] pandaids: 6898271239
[2025-12-02 10:13:28] 2025-12-02 10:13:27,697 [wrapper] cleanup supervisor_pilot 3609452 3437989
[2025-12-02 10:13:28] 2025-12-02 10:13:27,699 [wrapper] Test setup, not cleaning
[2025-12-02 10:13:28] 2025-12-02 10:13:27,700 [wrapper] apfmon messages muted
[2025-12-02 10:13:28] 2025-12-02 10:13:27,758 [wrapper] ==== wrapper stdout END ====
[2025-12-02 10:13:28] 2025-12-02 10:13:27,771 [wrapper] ==== wrapper stderr END ====
[2025-12-02 10:13:28]  *** Error codes and diagnostics ***
[2025-12-02 10:13:28]     "exeErrorCode": 0,
[2025-12-02 10:13:28]     "exeErrorDiag": "",
[2025-12-02 10:13:28]     "pilotErrorCode": 0,
[2025-12-02 10:13:28]     "pilotErrorDiag": "",
[2025-12-02 10:13:28]  *** Listing of results directory ***
[2025-12-02 10:13:28] total 1304912
[2025-12-02 10:13:28] -rw-r--r-- 1 boinc boinc    576529 Nov 26 14:19 pilot3.tar.gz
[2025-12-02 10:13:28] -rwx------ 1 boinc boinc     36292 Nov 26 14:52 runpilot2-wrapper.sh
[2025-12-02 10:13:28] -rw-r--r-- 1 boinc boinc      5112 Nov 26 14:52 queuedata.json
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc       100 Dez  2 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 10:13:28] -rwxr-xr-x 1 boinc boinc      7986 Dez  2 02:50 run_atlas
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc       105 Dez  2 02:50 job.xml
[2025-12-02 10:13:28] -rw-r--r-- 2 boinc boinc     15847 Dez  2 02:50 start_atlas.sh
[2025-12-02 10:13:28] drwxrwx--x 2 boinc boinc      4096 Dez  2 02:50 shared
[2025-12-02 10:13:28] -rw-r--r-- 2 boinc boinc    590104 Dez  2 02:50 input.tar.gz
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc      6936 Dez  2 02:50 init_data.xml
[2025-12-02 10:13:28] -rw-r--r-- 2 boinc boinc 410525851 Dez  2 02:50 EVNT.47483658._002529.pool.root.1
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc         0 Dez  2 02:50 boinc_setup_complete
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc         0 Dez  2 02:50 boinc_lockfile
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc      2786 Dez  2 02:50 pandaJob.out
[2025-12-02 10:13:28] -rw------- 1 boinc boinc    992008 Dez  2 02:51 agis_schedconf.cvmfs.json
[2025-12-02 10:13:28] drwx------ 5 boinc boinc      4096 Dez  2 02:51 pilot3
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc       533 Dez  2 10:02 boinc_task_state.xml
[2025-12-02 10:13:28] -rw------- 1 boinc boinc 909894583 Dez  2 10:11 HITS.47556161._005118.pool.root.1
[2025-12-02 10:13:28] -rw------- 1 boinc boinc      1032 Dez  2 10:11 memory_monitor_summary.json
[2025-12-02 10:13:28] -rw------- 1 boinc boinc   1516240 Dez  2 10:11 agis_ddmendpoints.agis.ALL.json
[2025-12-02 10:13:28] -rw------- 1 boinc boinc   2126432 Dez  2 10:11 log.47556161._005118.job.log.tgz.1
[2025-12-02 10:13:28] -rw------- 1 boinc boinc        95 Dez  2 10:12 pilot_heartbeat.json
[2025-12-02 10:13:28] -rw------- 1 boinc boinc      8569 Dez  2 10:12 heartbeat.json
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc      8192 Dez  2 10:13 boinc_mmap_file
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc        29 Dez  2 10:13 wrapper_checkpoint.txt
[2025-12-02 10:13:28] -rw------- 1 boinc boinc      4846 Dez  2 10:13 pilotlog.txt
[2025-12-02 10:13:28] -rw------- 1 boinc boinc   3817896 Dez  2 10:13 log.47556161._005118.job.log.1
[2025-12-02 10:13:28] -rw------- 1 boinc boinc       353 Dez  2 10:13 output.list
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc       620 Dez  2 10:13 runtime_log
[2025-12-02 10:13:28] -rw------- 1 boinc boinc   5959680 Dez  2 10:13 result.tar.gz
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc      9158 Dez  2 10:13 runtime_log.err
[2025-12-02 10:13:28] -rw------- 1 boinc boinc       658 Dez  2 10:13 KmHNDm93Vi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmh2MKDmgnyTbm.diag
[2025-12-02 10:13:28] -rw-rw-r-- 1 boinc boinc     21167 Dez  2 10:13 stderr.txt
[2025-12-02 10:13:28] HITS file was successfully produced:
[2025-12-02 10:13:28] -rw------- 1 boinc boinc 909894583 Dez  2 10:11 shared/HITS.pool.root.1
[2025-12-02 10:13:28]  *** Contents of shared directory: ***
[2025-12-02 10:13:28] total 1295904
[2025-12-02 10:13:28] -rw-r--r-- 2 boinc boinc     15847 Dez  2 02:50 start_atlas.sh
[2025-12-02 10:13:28] -rw-r--r-- 2 boinc boinc    590104 Dez  2 02:50 input.tar.gz
[2025-12-02 10:13:28] -rw-r--r-- 2 boinc boinc 410525851 Dez  2 02:50 ATLAS.root_0
[2025-12-02 10:13:28] -rw------- 1 boinc boinc 909894583 Dez  2 10:11 HITS.pool.root.1
[2025-12-02 10:13:28] -rw------- 1 boinc boinc   5959680 Dez  2 10:13 result.tar.gz
10:13:30 (3434196): run_atlas exited; CPU time 140414.482719
10:13:30 (3434196): called boinc_finish(0)

</stderr_txt>
]]>

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