Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:43:22 (2280161): wrapper (7.7.26015): starting
04:43:22 (2280161): wrapper: running run_atlas (--nthreads 12)
[2025-11-28 04:43:22] Arguments: --nthreads 12
[2025-11-28 04:43:22] Threads: 12
[2025-11-28 04:43:22] Checking for CVMFS
[2025-11-28 04:43:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 04:43:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 04:43:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 04:43:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 04:43:22] 2.13.2.0 2232356 237 43260 153395 3 81 2166246 4096000 0 130560 0 131414 99.981 9331 398 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-11-28 04:43:22] CVMFS is ok
[2025-11-28 04:43:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 04:43:22] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-28 04:43:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-28 04:43:22] Further information can be found at the LHC@home message board.
[2025-11-28 04:43:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 04:43:22] Checking for apptainer binary...
[2025-11-28 04:43:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 04:43:22] Running /usr/bin/apptainer --version
[2025-11-28 04:43:22] apptainer version 1.4.3
[2025-11-28 04:43:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 04:43:22] tito-MS-7C02
[2025-11-28 04:43:22] apptainer works
[2025-11-28 04:43:22] Set ATHENA_PROC_NUMBER=12
[2025-11-28 04:43:22] Set ATHENA_CORE_NUMBER=12
[2025-11-28 04:43:22] Starting ATLAS job with PandaID=6898720528
[2025-11-28 04:43:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 08:30:01]  *** The last 200 lines of the pilot log: ***
[2025-11-28 08:30:01] 2025-11-28 07:29:27,597 | INFO     | using path: /var/lib/boinc-client/slots/23/PanDA_Pilot-6898720528/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 08:30:01] 2025-11-28 07:29:27,669 | INFO     | number of running child processes to parent process 2290560: 1
[2025-11-28 08:30:01] 2025-11-28 07:29:27,669 | INFO     | maximum number of monitored processes: 17
[2025-11-28 08:30:01] 2025-11-28 07:29:27,858 | INFO     | time since job start (13558s) is within the limit (172800.0s)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,727 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 08:30:01] 2025-11-28 07:29:29,729 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3249.9694166666673
[2025-11-28 08:30:01] 2025-11-28 07:29:29,732 | INFO     | using path: /var/lib/boinc-client/slots/23/PanDA_Pilot-6898720528/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,732 | INFO     | extracted standard info from prmon json
[2025-11-28 08:30:01] 2025-11-28 07:29:29,732 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 08:30:01] 2025-11-28 07:29:29,732 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 08:30:01] 2025-11-28 07:29:29,734 | INFO     | fitting pss+swap vs Time
[2025-11-28 08:30:01] 2025-11-28 07:29:29,734 | INFO     | sum of square deviations: 3392529786.6351237
[2025-11-28 08:30:01] 2025-11-28 07:29:29,735 | INFO     | sum of deviations: 104577643772.52689
[2025-11-28 08:30:01] 2025-11-28 07:29:29,735 | INFO     | mean x: 1764308169.9594595
[2025-11-28 08:30:01] 2025-11-28 07:29:29,735 | INFO     | mean y: 3468593.725225225
[2025-11-28 08:30:01] 2025-11-28 07:29:29,735 | INFO     | intersect: -54382845722.46605
[2025-11-28 08:30:01] 2025-11-28 07:29:29,735 | INFO     | chi2: 3.5608505262086902
[2025-11-28 08:30:01] 2025-11-28 07:29:29,735 | INFO     | sum of square deviations: 3168454368.055295
[2025-11-28 08:30:01] 2025-11-28 07:29:29,736 | INFO     | sum of deviations: 159916619044.6866
[2025-11-28 08:30:01] 2025-11-28 07:29:29,736 | INFO     | mean x: 1764308017.470046
[2025-11-28 08:30:01] 2025-11-28 07:29:29,736 | INFO     | mean y: 3505964.33640553
[2025-11-28 08:30:01] 2025-11-28 07:29:29,736 | INFO     | intersect: -89043751888.5246
[2025-11-28 08:30:01] 2025-11-28 07:29:29,736 | INFO     | chi2: 1.8411765199938477
[2025-11-28 08:30:01] 2025-11-28 07:29:29,736 | INFO     | current chi2=1.8411765199938477 (change=48.29391162469868 %)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,737 | INFO     | sum of square deviations: 2954445687.8302026
[2025-11-28 08:30:01] 2025-11-28 07:29:29,737 | INFO     | sum of deviations: 153004245598.77365
[2025-11-28 08:30:01] 2025-11-28 07:29:29,737 | INFO     | mean x: 1764307864.971698
[2025-11-28 08:30:01] 2025-11-28 07:29:29,737 | INFO     | mean y: 3501037.962264151
[2025-11-28 08:30:01] 2025-11-28 07:29:29,737 | INFO     | intersect: -91366123726.48254
[2025-11-28 08:30:01] 2025-11-28 07:29:29,737 | INFO     | chi2: 1.8403786413718832
[2025-11-28 08:30:01] 2025-11-28 07:29:29,738 | INFO     | current chi2=1.8403786413718832 (change=0.043335259455031507 %)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,738 | INFO     | right removable region: 211
[2025-11-28 08:30:01] 2025-11-28 07:29:29,738 | INFO     | sum of square deviations: 3168405445.990773
[2025-11-28 08:30:01] 2025-11-28 07:29:29,738 | INFO     | sum of deviations: 44669605352.85717
[2025-11-28 08:30:01] 2025-11-28 07:29:29,738 | INFO     | mean x: 1764308322.465438
[2025-11-28 08:30:01] 2025-11-28 07:29:29,738 | INFO     | mean y: 3509031.714285714
[2025-11-28 08:30:01] 2025-11-28 07:29:29,739 | INFO     | intersect: -24870503410.417492
[2025-11-28 08:30:01] 2025-11-28 07:29:29,739 | INFO     | chi2: 1.7832752448202456
[2025-11-28 08:30:01] 2025-11-28 07:29:29,739 | INFO     | current chi2=1.7832752448202456 (change=49.91996345550245 %)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,739 | INFO     | sum of square deviations: 2954387432.768871
[2025-11-28 08:30:01] 2025-11-28 07:29:29,739 | INFO     | sum of deviations: 35410869378.94813
[2025-11-28 08:30:01] 2025-11-28 07:29:29,740 | INFO     | mean x: 1764308474.9669812
[2025-11-28 08:30:01] 2025-11-28 07:29:29,740 | INFO     | mean y: 3515614.2783018867
[2025-11-28 08:30:01] 2025-11-28 07:29:29,740 | INFO     | intersect: -21143235911.358376
[2025-11-28 08:30:01] 2025-11-28 07:29:29,740 | INFO     | chi2: 1.7742746606527722
[2025-11-28 08:30:01] 2025-11-28 07:29:29,740 | INFO     | current chi2=1.7742746606527722 (change=0.5047220945626182 %)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,740 | INFO     | left removable region: 20
[2025-11-28 08:30:01] 2025-11-28 07:29:29,740 | INFO     | sum of square deviations: 2160543675.6858544
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | sum of deviations: 72539440717.70682
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | mean x: 1764308444.4816754
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | mean y: 3560738.9162303666
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | intersect: -59232431227.59689
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | chi2: 0.01959732500663461
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | current memory leak: 33.57 B/s (using 191 data points, chi2=0.02)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | could have reported an average CPU frequency of 3530 MHz (11 samples)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | ..............................
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | . Timing measurements:
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | . get job = 0 s
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | . initial setup = 1 s
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | . payload setup = 3 s
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | . stage-in = 0 s
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | . payload execution = 13533 s
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | . stage-out = 1 s
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | . log creation = 0 s
[2025-11-28 08:30:01] 2025-11-28 07:29:29,741 | INFO     | ..............................
[2025-11-28 08:30:01] 2025-11-28 07:29:29,787 | INFO     | 
[2025-11-28 08:30:01] 2025-11-28 07:29:29,787 | INFO     | job summary report
[2025-11-28 08:30:01] 2025-11-28 07:29:29,787 | INFO     | --------------------------------------------------
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | PanDA job id: 6898720528
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | task id: 47556161
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | errors: (none)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | pilot state: finished 
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | transexitcode: 0
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | exeerrorcode: 0
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | exeerrordiag: 
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | exitcode: 0
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | exitmsg: OK
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | cpuconsumptiontime: 158650 s
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | nevents: 1000
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | neventsw: 0
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | pid: 2290560
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | pgrp: 2290560
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | corecount: 12
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | event service: False
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | sizes: {0: 2284152, 1: 2284351, 3: 2284613, 11: 2284641, 13540: 2316046, 13542: 2325056, 13543: 2325240, 13547: 2325486}
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | --------------------------------------------------
[2025-11-28 08:30:01] 2025-11-28 07:29:29,788 | INFO     | 
[2025-11-28 08:30:01] 2025-11-28 07:29:29,789 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/23
[2025-11-28 08:30:01] 2025-11-28 07:29:29,802 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,802 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,802 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | job 6898720528 has completed (purged errors)
[2025-11-28 08:30:01] 2025-11-28 07:29:29,803 | INFO     | overall cleanup function is called
[2025-11-28 08:30:01] 2025-11-28 07:29:30,818 | INFO     | --- collectZombieJob: --- 10, [2290560]
[2025-11-28 08:30:01] 2025-11-28 07:29:30,818 | INFO     | zombie collector waiting for pid 2290560
[2025-11-28 08:30:01] 2025-11-28 07:29:30,818 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 08:30:01] 2025-11-28 07:29:30,818 | INFO     | collected zombie processes
[2025-11-28 08:30:01] 2025-11-28 07:29:30,818 | INFO     | will attempt to kill all subprocesses of pid=2290560
[2025-11-28 08:30:01] 2025-11-28 07:29:30,884 | INFO     | process IDs to be killed: [2290560] (in reverse order)
[2025-11-28 08:30:01] 2025-11-28 07:29:30,932 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 08:30:01] 2025-11-28 07:29:30,932 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 08:30:01] 2025-11-28 07:29:30,934 | INFO     | did not find any defunct processes belonging to 2290560
[2025-11-28 08:30:01] 2025-11-28 07:29:30,936 | INFO     | did not find any defunct processes belonging to 2290560
[2025-11-28 08:30:01] 2025-11-28 07:29:30,939 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 08:30:01] 2025-11-28 07:29:30,939 | INFO     | ready for new job
[2025-11-28 08:30:01] 2025-11-28 07:29:30,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 08:30:01] 2025-11-28 07:29:30,940 | INFO     | ***************************************
[2025-11-28 08:30:01] 2025-11-28 07:29:30,940 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 08:30:01] 2025-11-28 07:29:30,940 | INFO     | ***************************************
[2025-11-28 08:30:01] 2025-11-28 07:29:30,940 | INFO     | 
[2025-11-28 08:30:01] 2025-11-28 07:29:30,941 | INFO     | architecture information:
[2025-11-28 08:30:01] 2025-11-28 07:29:30,941 | INFO     | executing command: cat /etc/os-release
[2025-11-28 08:30:01] 2025-11-28 07:29:30,951 | INFO     | cat /etc/os-release:
[2025-11-28 08:30:01] NAME="CentOS Linux"
[2025-11-28 08:30:01] VERSION="7 (Core)"
[2025-11-28 08:30:01] ID="centos"
[2025-11-28 08:30:01] ID_LIKE="rhel fedora"
[2025-11-28 08:30:01] VERSION_ID="7"
[2025-11-28 08:30:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 08:30:01] ANSI_COLOR="0;31"
[2025-11-28 08:30:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 08:30:01] HOME_URL="https://www.centos.org/"
[2025-11-28 08:30:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 08:30:01] 
[2025-11-28 08:30:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 08:30:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 08:30:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 08:30:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 08:30:01] 
[2025-11-28 08:30:01] 2025-11-28 07:29:30,952 | INFO     | ***************************************
[2025-11-28 08:30:01] 2025-11-28 07:29:31,454 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/23
[2025-11-28 08:30:01] 2025-11-28 07:29:31,464 | INFO     | sufficient remaining disk space (191337857024 B)
[2025-11-28 08:30:01] 2025-11-28 07:29:31,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 08:30:01] 2025-11-28 07:29:31,464 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 08:30:01] 2025-11-28 07:29:31,464 | INFO     | update_server=False
[2025-11-28 08:30:01] 2025-11-28 07:29:31,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 08:30:01] 2025-11-28 07:29:31,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:30:01] 2025-11-28 07:29:31,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 08:30:01] 2025-11-28 07:29:31,465 | INFO     | aborting loop
[2025-11-28 08:30:01] 2025-11-28 07:29:31,524 | INFO     | all payload control threads have been joined
[2025-11-28 08:30:01] 2025-11-28 07:29:31,619 | INFO     | all data control threads have been joined
[2025-11-28 08:30:01] 2025-11-28 07:29:31,992 | INFO     | all job control threads have been joined
[2025-11-28 08:30:01] 2025-11-28 07:29:32,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 08:30:01] 2025-11-28 07:29:32,470 | INFO     | [job] retrieve thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:32,470 | INFO     | [job] queue monitor thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:32,470 | INFO     | [job] job monitor thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:32,529 | INFO     | [payload] control thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:32,624 | INFO     | [data] control thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:32,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 08:30:01] 2025-11-28 07:29:32,661 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:32,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:32,997 | INFO     | [job] control thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:33,232 | INFO     | [data] copytool_in thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:33,303 | INFO     | [payload] validate_post thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:33,506 | INFO     | [job] validate thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:33,634 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:33,660 | INFO     | [payload] failed_post thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:33,712 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:34,665 | INFO     | [data] copytool_out thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:36,339 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 08:30:01] 2025-11-28 07:29:51,009 | INFO     | [monitor] cgroup control has ended
[2025-11-28 08:30:01] 2025-11-28 07:29:51,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124415920420672)>', '<ExcThread(monitor, started 124415551473408)>']
[2025-11-28 08:30:01] 2025-11-28 07:29:56,323 | INFO     | all workflow threads have been joined
[2025-11-28 08:30:01] 2025-11-28 07:29:56,323 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 08:30:01] 2025-11-28 07:29:56,324 | INFO     | traces error code: 0
[2025-11-28 08:30:01] 2025-11-28 07:29:56,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 08:30:01] 2025-11-28 07:30:01,009 | INFO     | PID=2283980 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 08:30:01] 2025-11-28 07:30:01,009 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 08:30:01] 2025-11-28 07:30:01,009 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 08:30:01] 2025-11-28 07:30:01,009 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 08:30:01] 2025-11-28 07:30:01,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 08:30:01] 2025-11-28 07:30:01,009 | INFO     | [monitor] control thread has ended
[2025-11-28 08:30:01] 2025-11-28 07:30:01,086 [wrapper] ==== pilot stdout END ====
[2025-11-28 08:30:01] 2025-11-28 07:30:01,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 08:30:01] 2025-11-28 07:30:01,091 [wrapper] pilotpid: 2283980
[2025-11-28 08:30:01] 2025-11-28 07:30:01,093 [wrapper] Pilot exit status: 0
[2025-11-28 08:30:01] 2025-11-28 07:30:01,100 [wrapper] pandaids: 6898720528
[2025-11-28 08:30:01] 2025-11-28 07:30:01,129 [wrapper] cleanup supervisor_pilot 2326171 2283981
[2025-11-28 08:30:01] 2025-11-28 07:30:01,130 [wrapper] Test setup, not cleaning
[2025-11-28 08:30:01] 2025-11-28 07:30:01,133 [wrapper] apfmon messages muted
[2025-11-28 08:30:01] 2025-11-28 07:30:01,135 [wrapper] ==== wrapper stdout END ====
[2025-11-28 08:30:01] 2025-11-28 07:30:01,137 [wrapper] ==== wrapper stderr END ====
[2025-11-28 08:30:01]  *** Error codes and diagnostics ***
[2025-11-28 08:30:01]     "exeErrorCode": 0,
[2025-11-28 08:30:01]     "exeErrorDiag": "",
[2025-11-28 08:30:01]     "pilotErrorCode": 0,
[2025-11-28 08:30:01]     "pilotErrorDiag": "",
[2025-11-28 08:30:01]  *** Listing of results directory ***
[2025-11-28 08:30:01] razem 1299896
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc    576529 lis 26 22:46 pilot3.tar.gz
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc      5112 lis 26 22:58 queuedata.json
[2025-11-28 08:30:01] -rwx------ 1 boinc boinc     36292 lis 26 22:59 runpilot2-wrapper.sh
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc       100 lis 28 04:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 08:30:01] -rwxr-xr-x 1 boinc boinc      7986 lis 28 04:43 run_atlas
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc       105 lis 28 04:43 job.xml
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc      9549 lis 28 04:43 init_data.xml
[2025-11-28 08:30:01] -rw-r--r-- 2 boinc boinc 410749216 lis 28 04:43 EVNT.47483658._002694.pool.root.1
[2025-11-28 08:30:01] -rw-r--r-- 2 boinc boinc     15847 lis 28 04:43 start_atlas.sh
[2025-11-28 08:30:01] drwxrwx--x 2 boinc boinc      4096 lis 28 04:43 shared
[2025-11-28 08:30:01] -rw-r--r-- 2 boinc boinc    590113 lis 28 04:43 input.tar.gz
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc         0 lis 28 04:43 boinc_lockfile
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc      2786 lis 28 04:43 pandaJob.out
[2025-11-28 08:30:01] -rw------- 1 boinc boinc    991850 lis 28 04:43 agis_schedconf.cvmfs.json
[2025-11-28 08:30:01] drwx------ 5 boinc boinc      4096 lis 28 04:43 pilot3
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc       532 lis 28 08:24 boinc_task_state.xml
[2025-11-28 08:30:01] -rw------- 1 boinc boinc 908611687 lis 28 08:29 HITS.47556161._006766.pool.root.1
[2025-11-28 08:30:01] -rw------- 1 boinc boinc      1035 lis 28 08:29 memory_monitor_summary.json
[2025-11-28 08:30:01] -rw------- 1 boinc boinc        95 lis 28 08:29 pilot_heartbeat.json
[2025-11-28 08:30:01] -rw------- 1 boinc boinc   1516240 lis 28 08:29 agis_ddmendpoints.agis.ALL.json
[2025-11-28 08:30:01] -rw------- 1 boinc boinc   1958628 lis 28 08:29 log.47556161._006766.job.log.tgz.1
[2025-11-28 08:30:01] -rw------- 1 boinc boinc      8579 lis 28 08:29 heartbeat.json
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc        29 lis 28 08:29 wrapper_checkpoint.txt
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc      8192 lis 28 08:29 boinc_mmap_file
[2025-11-28 08:30:01] -rw------- 1 boinc boinc       747 lis 28 08:30 pilotlog.txt
[2025-11-28 08:30:01] -rw------- 1 boinc boinc   1946281 lis 28 08:30 log.47556161._006766.job.log.1
[2025-11-28 08:30:01] -rw------- 1 boinc boinc       353 lis 28 08:30 output.list
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc       620 lis 28 08:30 runtime_log
[2025-11-28 08:30:01] -rw------- 1 boinc boinc   3921920 lis 28 08:30 result.tar.gz
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc      8915 lis 28 08:30 runtime_log.err
[2025-11-28 08:30:01] -rw------- 1 boinc boinc       652 lis 28 08:30 fhnMDmdici8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHFKKDm0Hso2m.diag
[2025-11-28 08:30:01] -rw-r--r-- 1 boinc boinc     21459 lis 28 08:30 stderr.txt
[2025-11-28 08:30:01] HITS file was successfully produced:
[2025-11-28 08:30:01] -rw------- 1 boinc boinc 908611687 lis 28 08:29 shared/HITS.pool.root.1
[2025-11-28 08:30:01]  *** Contents of shared directory: ***
[2025-11-28 08:30:01] razem 1292880
[2025-11-28 08:30:01] -rw-r--r-- 2 boinc boinc 410749216 lis 28 04:43 ATLAS.root_0
[2025-11-28 08:30:01] -rw-r--r-- 2 boinc boinc     15847 lis 28 04:43 start_atlas.sh
[2025-11-28 08:30:01] -rw-r--r-- 2 boinc boinc    590113 lis 28 04:43 input.tar.gz
[2025-11-28 08:30:01] -rw------- 1 boinc boinc 908611687 lis 28 08:29 HITS.pool.root.1
[2025-11-28 08:30:01] -rw------- 1 boinc boinc   3921920 lis 28 08:30 result.tar.gz
08:30:03 (2280161): run_atlas exited; CPU time 158485.517816
08:30:03 (2280161): called boinc_finish(0)

</stderr_txt>
]]>

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