Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:45:19 (2538718): wrapper (7.7.26015): starting
22:45:19 (2538718): wrapper: running run_atlas (--nthreads 3)
[2025-11-30 22:45:19] Arguments: --nthreads 3
[2025-11-30 22:45:19] Threads: 3
[2025-11-30 22:45:19] Checking for CVMFS
[2025-11-30 22:45:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 22:45:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 22:45:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 22:45:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 22:45:19] 2.9.2.0 237354 17380 98592 153494 2 81 22124864 36864000 0 130560 1 6404626 99.951 796759 975 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-30 22:45:19] CVMFS is ok
[2025-11-30 22:45:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 22:45:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 22:45:19] Further information can be found at the LHC@home message board.
[2025-11-30 22:45:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 22:45:19] Checking for apptainer binary...
[2025-11-30 22:45:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 22:45:19] Running /usr/bin/apptainer --version
[2025-11-30 22:45:19] apptainer version 1.4.1-1.1
[2025-11-30 22:45:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 22:45:19] cosA127b
[2025-11-30 22:45:19] apptainer works
[2025-11-30 22:45:19] Set ATHENA_PROC_NUMBER=3
[2025-11-30 22:45:19] Set ATHENA_CORE_NUMBER=3
[2025-11-30 22:45:19] Starting ATLAS job with PandaID=6893854777
[2025-11-30 22:45:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 06:49:04]  *** The last 200 lines of the pilot log: ***
[2025-12-01 06:49:04] 2025-12-01 05:48:31,109 | WARNING  | process 2548885 can no longer be monitored (due to stat problems) - aborting
[2025-12-01 06:49:04] 2025-12-01 05:48:31,109 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6893854777/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 06:49:04] 2025-12-01 05:48:31,157 | INFO     | number of running child processes to parent process 2548885: 1
[2025-12-01 06:49:04] 2025-12-01 05:48:31,157 | INFO     | maximum number of monitored processes: 9
[2025-12-01 06:49:04] 2025-12-01 05:48:32,636 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-01 06:49:04] 2025-12-01 05:48:32,637 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3604.668833333333
[2025-12-01 06:49:04] 2025-12-01 05:48:32,638 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6893854777/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,638 | INFO     | extracted standard info from prmon json
[2025-12-01 06:49:04] 2025-12-01 05:48:32,638 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 06:49:04] 2025-12-01 05:48:32,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 06:49:04] 2025-12-01 05:48:32,641 | INFO     | fitting pss+swap vs Time
[2025-12-01 06:49:04] 2025-12-01 05:48:32,641 | INFO     | sum of square deviations: 33232064950.0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,643 | INFO     | sum of deviations: 225906716800.0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,643 | INFO     | mean x: 1764553601.0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,643 | INFO     | mean y: 2205265.096842105
[2025-12-01 06:49:04] 2025-12-01 05:48:32,643 | INFO     | intersect: -11992972019.832218
[2025-12-01 06:49:04] 2025-12-01 05:48:32,643 | INFO     | chi2: 3.3710149487517524
[2025-12-01 06:49:04] 2025-12-01 05:48:32,643 | INFO     | sum of square deviations: 32193636177.5
[2025-12-01 06:49:04] 2025-12-01 05:48:32,645 | INFO     | sum of deviations: 270113688615.99997
[2025-12-01 06:49:04] 2025-12-01 05:48:32,645 | INFO     | mean x: 1764553448.5
[2025-12-01 06:49:04] 2025-12-01 05:48:32,645 | INFO     | mean y: 2211718.3531914894
[2025-12-01 06:49:04] 2025-12-01 05:48:32,645 | INFO     | intersect: -14802889454.639896
[2025-12-01 06:49:04] 2025-12-01 05:48:32,645 | INFO     | chi2: 2.468055207013404
[2025-12-01 06:49:04] 2025-12-01 05:48:32,645 | INFO     | current chi2=2.468055207013404 (change=26.785990435097418 %)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,645 | INFO     | sum of square deviations: 31177068280.0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,647 | INFO     | sum of deviations: 264976207615.99994
[2025-12-01 06:49:04] 2025-12-01 05:48:32,647 | INFO     | mean x: 1764553296.0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,647 | INFO     | mean y: 2210947.582795699
[2025-12-01 06:49:04] 2025-12-01 05:48:32,647 | INFO     | intersect: -14994857933.660744
[2025-12-01 06:49:04] 2025-12-01 05:48:32,647 | INFO     | chi2: 2.467588058076147
[2025-12-01 06:49:04] 2025-12-01 05:48:32,647 | INFO     | current chi2=2.467588058076147 (change=0.018927815550043647 %)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,647 | INFO     | right removable region: 464
[2025-12-01 06:49:04] 2025-12-01 05:48:32,648 | INFO     | sum of square deviations: 32193636177.5
[2025-12-01 06:49:04] 2025-12-01 05:48:32,649 | INFO     | sum of deviations: 124939040359.50006
[2025-12-01 06:49:04] 2025-12-01 05:48:32,649 | INFO     | mean x: 1764553753.5
[2025-12-01 06:49:04] 2025-12-01 05:48:32,649 | INFO     | mean y: 2220072.5978723406
[2025-12-01 06:49:04] 2025-12-01 05:48:32,649 | INFO     | intersect: -6845768499.103871
[2025-12-01 06:49:04] 2025-12-01 05:48:32,650 | INFO     | chi2: 1.2305024477328033
[2025-12-01 06:49:04] 2025-12-01 05:48:32,650 | INFO     | current chi2=1.2305024477328033 (change=63.497567752155945 %)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,650 | INFO     | sum of square deviations: 31177068280.0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,652 | INFO     | sum of deviations: 98559399399.00003
[2025-12-01 06:49:04] 2025-12-01 05:48:32,652 | INFO     | mean x: 1764553906.0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,652 | INFO     | mean y: 2224010.8559139785
[2025-12-01 06:49:04] 2025-12-01 05:48:32,652 | INFO     | intersect: -5576022526.650773
[2025-12-01 06:49:04] 2025-12-01 05:48:32,652 | INFO     | chi2: 0.974646300755927
[2025-12-01 06:49:04] 2025-12-01 05:48:32,652 | INFO     | current chi2=0.974646300755927 (change=20.792819018628563 %)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,652 | INFO     | left removable region: 20
[2025-12-01 06:49:04] 2025-12-01 05:48:32,652 | INFO     | sum of square deviations: 27140955395.0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | sum of deviations: 125312064356.99995
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | mean x: 1764553875.5
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | mean y: 2232294.626126126
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | intersect: -8144860745.76055
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | chi2: 0.06172911747894788
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | current memory leak: 4.62 B/s (using 444 data points, chi2=0.06)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | could have reported an average CPU frequency of 3982 MHz (19 samples)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | ..............................
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | . Timing measurements:
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | . get job = 0 s
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | . initial setup = 1 s
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | . payload setup = 2 s
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | . stage-in = 0 s
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | . payload execution = 28962 s
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | . stage-out = 1 s
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | . log creation = 0 s
[2025-12-01 06:49:04] 2025-12-01 05:48:32,654 | INFO     | ..............................
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | 
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | job summary report
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | --------------------------------------------------
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | PanDA job id: 6893854777
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | task id: 47523449
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | errors: (none)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | pilot state: finished 
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | transexitcode: 0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | exeerrorcode: 0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | exeerrordiag: 
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | exitcode: 0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | exitmsg: OK
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | cpuconsumptiontime: 85589 s
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | nevents: 1000
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | neventsw: 0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | pid: 2548885
[2025-12-01 06:49:04] 2025-12-01 05:48:32,821 | INFO     | pgrp: 2548885
[2025-12-01 06:49:04] 2025-12-01 05:48:32,822 | INFO     | corecount: 3
[2025-12-01 06:49:04] 2025-12-01 05:48:32,822 | INFO     | event service: False
[2025-12-01 06:49:04] 2025-12-01 05:48:32,822 | INFO     | sizes: {0: 2284318, 2: 2284580, 10: 2284608, 28968: 2323575, 28969: 2332575, 28970: 2332631, 28974: 2333005}
[2025-12-01 06:49:04] 2025-12-01 05:48:32,822 | INFO     | --------------------------------------------------
[2025-12-01 06:49:04] 2025-12-01 05:48:32,822 | INFO     | 
[2025-12-01 06:49:04] 2025-12-01 05:48:32,822 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-01 06:49:04] 2025-12-01 05:48:32,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | job 6893854777 has completed (purged errors)
[2025-12-01 06:49:04] 2025-12-01 05:48:32,837 | INFO     | overall cleanup function is called
[2025-12-01 06:49:04] 2025-12-01 05:48:33,846 | INFO     | --- collectZombieJob: --- 10, [2548885]
[2025-12-01 06:49:04] 2025-12-01 05:48:33,846 | INFO     | zombie collector waiting for pid 2548885
[2025-12-01 06:49:04] 2025-12-01 05:48:33,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 06:49:04] 2025-12-01 05:48:33,847 | INFO     | collected zombie processes
[2025-12-01 06:49:04] 2025-12-01 05:48:33,847 | INFO     | will attempt to kill all subprocesses of pid=2548885
[2025-12-01 06:49:04] 2025-12-01 05:48:33,889 | INFO     | process IDs to be killed: [2548885] (in reverse order)
[2025-12-01 06:49:04] 2025-12-01 05:48:33,912 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 06:49:04] 2025-12-01 05:48:33,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 06:49:04] 2025-12-01 05:48:33,914 | INFO     | did not find any defunct processes belonging to 2548885
[2025-12-01 06:49:04] 2025-12-01 05:48:33,915 | INFO     | did not find any defunct processes belonging to 2548885
[2025-12-01 06:49:04] 2025-12-01 05:48:33,915 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 06:49:04] 2025-12-01 05:48:33,915 | INFO     | ready for new job
[2025-12-01 06:49:04] 2025-12-01 05:48:33,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 06:49:04] 2025-12-01 05:48:33,916 | INFO     | ***************************************
[2025-12-01 06:49:04] 2025-12-01 05:48:33,917 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 06:49:04] 2025-12-01 05:48:33,917 | INFO     | ***************************************
[2025-12-01 06:49:04] 2025-12-01 05:48:33,917 | INFO     | 
[2025-12-01 06:49:04] 2025-12-01 05:48:33,917 | INFO     | architecture information:
[2025-12-01 06:49:04] 2025-12-01 05:48:33,917 | INFO     | executing command: cat /etc/os-release
[2025-12-01 06:49:04] 2025-12-01 05:48:33,925 | INFO     | cat /etc/os-release:
[2025-12-01 06:49:04] NAME="CentOS Linux"
[2025-12-01 06:49:04] VERSION="7 (Core)"
[2025-12-01 06:49:04] ID="centos"
[2025-12-01 06:49:04] ID_LIKE="rhel fedora"
[2025-12-01 06:49:04] VERSION_ID="7"
[2025-12-01 06:49:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 06:49:04] ANSI_COLOR="0;31"
[2025-12-01 06:49:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 06:49:04] HOME_URL="https://www.centos.org/"
[2025-12-01 06:49:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 06:49:04] 
[2025-12-01 06:49:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 06:49:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 06:49:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 06:49:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 06:49:04] 
[2025-12-01 06:49:04] 2025-12-01 05:48:33,925 | INFO     | ***************************************
[2025-12-01 06:49:04] 2025-12-01 05:48:34,429 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-01 06:49:04] 2025-12-01 05:48:34,442 | INFO     | sufficient remaining disk space (334880571392 B)
[2025-12-01 06:49:04] 2025-12-01 05:48:34,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 06:49:04] 2025-12-01 05:48:34,442 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 06:49:04] 2025-12-01 05:48:34,442 | INFO     | update_server=False
[2025-12-01 06:49:04] 2025-12-01 05:48:34,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 06:49:04] 2025-12-01 05:48:34,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 06:49:04] 2025-12-01 05:48:34,442 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 06:49:04] 2025-12-01 05:48:34,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 06:49:04] 2025-12-01 05:48:34,574 | INFO     | all data control threads have been joined
[2025-12-01 06:49:04] 2025-12-01 05:48:34,665 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 06:49:04] 2025-12-01 05:48:34,665 | INFO     | aborting loop
[2025-12-01 06:49:04] 2025-12-01 05:48:34,686 | INFO     | all job control threads have been joined
[2025-12-01 06:49:04] 2025-12-01 05:48:35,448 | INFO     | [job] queue monitor thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:35,448 | INFO     | [job] retrieve thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:35,479 | INFO     | all payload control threads have been joined
[2025-12-01 06:49:04] 2025-12-01 05:48:35,579 | INFO     | [data] control thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:35,671 | INFO     | [job] job monitor thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:35,691 | INFO     | [job] control thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:35,739 | INFO     | [payload] validate_post thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:35,836 | INFO     | [payload] failed_post thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:36,330 | INFO     | [data] copytool_in thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:36,446 | INFO     | [data] copytool_out thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:36,484 | INFO     | [payload] control thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:36,712 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:36,897 | INFO     | [job] validate thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:36,899 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:36,899 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:36,911 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:38,449 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 06:49:04] 2025-12-01 05:48:57,951 | INFO     | [monitor] cgroup control has ended
[2025-12-01 06:49:04] 2025-12-01 05:48:58,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013128009536)>', '<ExcThread(monitor, started 140012502902528)>']
[2025-12-01 06:49:04] 2025-12-01 05:49:03,921 | INFO     | all workflow threads have been joined
[2025-12-01 06:49:04] 2025-12-01 05:49:03,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 06:49:04] 2025-12-01 05:49:03,921 | INFO     | traces error code: 0
[2025-12-01 06:49:04] 2025-12-01 05:49:03,921 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 06:49:04] 2025-12-01 05:49:04,179 | INFO     | PID=2542443 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 06:49:04] 2025-12-01 05:49:04,179 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 06:49:04] 2025-12-01 05:49:04,180 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 06:49:04] 2025-12-01 05:49:04,180 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 06:49:04] 2025-12-01 05:49:04,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 06:49:04] 2025-12-01 05:49:04,180 | INFO     | [monitor] control thread has ended
[2025-12-01 06:49:04] 2025-12-01 05:49:04,226 [wrapper] ==== pilot stdout END ====
[2025-12-01 06:49:04] 2025-12-01 05:49:04,229 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 06:49:04] 2025-12-01 05:49:04,231 [wrapper] pilotpid: 2542443
[2025-12-01 06:49:04] 2025-12-01 05:49:04,233 [wrapper] Pilot exit status: 0
[2025-12-01 06:49:04] 2025-12-01 05:49:04,240 [wrapper] pandaids: 6893854777
[2025-12-01 06:49:04] 2025-12-01 05:49:04,256 [wrapper] cleanup supervisor_pilot 2598426 2542444
[2025-12-01 06:49:04] 2025-12-01 05:49:04,258 [wrapper] Test setup, not cleaning
[2025-12-01 06:49:04] 2025-12-01 05:49:04,260 [wrapper] apfmon messages muted
[2025-12-01 06:49:04] 2025-12-01 05:49:04,262 [wrapper] ==== wrapper stdout END ====
[2025-12-01 06:49:04] 2025-12-01 05:49:04,265 [wrapper] ==== wrapper stderr END ====
[2025-12-01 06:49:04]  *** Error codes and diagnostics ***
[2025-12-01 06:49:04]     "exeErrorCode": 0,
[2025-12-01 06:49:04]     "exeErrorDiag": "",
[2025-12-01 06:49:04]     "pilotErrorCode": 0,
[2025-12-01 06:49:04]     "pilotErrorDiag": "",
[2025-12-01 06:49:04]  *** Listing of results directory ***
[2025-12-01 06:49:04] total 1320828
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-12-01 06:49:04] -rwx------ 1 boinc boinc     36292 Nov 20 13:24 runpilot2-wrapper.sh
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:24 queuedata.json
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc       100 Nov 30 22:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 06:49:04] -rwxr-xr-x 1 boinc boinc      7986 Nov 30 22:45 run_atlas
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc       105 Nov 30 22:45 job.xml
[2025-12-01 06:49:04] -rw-r--r-- 2 boinc boinc 410984180 Nov 30 22:45 EVNT.47493127._000424.pool.root.1
[2025-12-01 06:49:04] -rw-r--r-- 2 boinc boinc    590096 Nov 30 22:45 input.tar.gz
[2025-12-01 06:49:04] -rw-r--r-- 2 boinc boinc     15847 Nov 30 22:45 start_atlas.sh
[2025-12-01 06:49:04] drwxrwx--x 2 boinc boinc      4096 Nov 30 22:45 shared
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc         0 Nov 30 22:45 boinc_setup_complete
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc      6442 Nov 30 22:45 init_data.xml
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc         0 Nov 30 22:45 boinc_lockfile
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc      2786 Nov 30 22:45 pandaJob.out
[2025-12-01 06:49:04] -rw------- 1 boinc boinc    993245 Nov 30 22:45 agis_schedconf.cvmfs.json
[2025-12-01 06:49:04] drwx------ 5 boinc boinc      4096 Nov 30 22:45 pilot3
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc       531 Dec  1 06:45 boinc_task_state.xml
[2025-12-01 06:49:04] -rw------- 1 boinc boinc 927142537 Dec  1 06:48 HITS.47523449._004234.pool.root.1
[2025-12-01 06:49:04] -rw------- 1 boinc boinc      1025 Dec  1 06:48 memory_monitor_summary.json
[2025-12-01 06:49:04] -rw------- 1 boinc boinc   1516240 Dec  1 06:48 agis_ddmendpoints.agis.ALL.json
[2025-12-01 06:49:04] -rw------- 1 boinc boinc   1160671 Dec  1 06:48 log.47523449._004234.job.log.tgz.1
[2025-12-01 06:49:04] -rw------- 1 boinc boinc      8584 Dec  1 06:48 heartbeat.json
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc      8192 Dec  1 06:48 boinc_mmap_file
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc        28 Dec  1 06:48 wrapper_checkpoint.txt
[2025-12-01 06:49:04] -rw------- 1 boinc boinc       747 Dec  1 06:49 pilotlog.txt
[2025-12-01 06:49:04] -rw------- 1 boinc boinc        95 Dec  1 06:49 pilot_heartbeat.json
[2025-12-01 06:49:04] -rw------- 1 boinc boinc   4079631 Dec  1 06:49 log.47523449._004234.job.log.1
[2025-12-01 06:49:04] -rw------- 1 boinc boinc       353 Dec  1 06:49 output.list
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc       620 Dec  1 06:49 runtime_log
[2025-12-01 06:49:04] -rw------- 1 boinc boinc   5263360 Dec  1 06:49 result.tar.gz
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc      8908 Dec  1 06:49 runtime_log.err
[2025-12-01 06:49:04] -rw------- 1 boinc boinc       667 Dec  1 06:49 9sOODmTtIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjmHKDmfMRzrn.diag
[2025-12-01 06:49:04] -rw-r--r-- 1 boinc boinc     21291 Dec  1 06:49 stderr.txt
[2025-12-01 06:49:04] HITS file was successfully produced:
[2025-12-01 06:49:04] -rw------- 1 boinc boinc 927142537 Dec  1 06:48 shared/HITS.pool.root.1
[2025-12-01 06:49:04]  *** Contents of shared directory: ***
[2025-12-01 06:49:04] total 1312512
[2025-12-01 06:49:04] -rw-r--r-- 2 boinc boinc 410984180 Nov 30 22:45 ATLAS.root_0
[2025-12-01 06:49:04] -rw-r--r-- 2 boinc boinc    590096 Nov 30 22:45 input.tar.gz
[2025-12-01 06:49:04] -rw-r--r-- 2 boinc boinc     15847 Nov 30 22:45 start_atlas.sh
[2025-12-01 06:49:04] -rw------- 1 boinc boinc 927142537 Dec  1 06:48 HITS.pool.root.1
[2025-12-01 06:49:04] -rw------- 1 boinc boinc   5263360 Dec  1 06:49 result.tar.gz
06:49:06 (2538718): run_atlas exited; CPU time 85613.860336
06:49:06 (2538718): called boinc_finish(0)

</stderr_txt>
]]>

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