Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:45:44 (11493): wrapper (7.7.26015): starting
02:45:44 (11493): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 02:45:44] Arguments: --nthreads 8
[2025-11-30 02:45:44] Threads: 8
[2025-11-30 02:45:44] Checking for CVMFS
[2025-11-30 02:45:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 02:45:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 02:45:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 02:45:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 02:45:47] 2.11.2.0 24289 290319 140124 153463 1 85 22039009 25165824 2504 130560 11 142436710 99.884 74263535 2884 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-30 02:45:47] CVMFS is ok
[2025-11-30 02:45:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 02:45:47] Checking for apptainer binary...
[2025-11-30 02:45:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 02:45:47] Running /usr/bin/apptainer --version
[2025-11-30 02:45:47] apptainer version 1.3.2-1.el7
[2025-11-30 02:45:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 02:46:01] cg-vwn388.simple-grid.lan
[2025-11-30 02:46:01] apptainer works
[2025-11-30 02:46:01] Set ATHENA_PROC_NUMBER=8
[2025-11-30 02:46:01] Set ATHENA_CORE_NUMBER=8
[2025-11-30 02:46:01] Starting ATLAS job with PandaID=6894259250
[2025-11-30 02:46:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 02:47:45]  *** The last 200 lines of the pilot log: ***
[2025-12-01 02:47:45] 2025-12-01 01:46:58,131 | INFO     | monitor loop #5801: job 0:6894259250 is in state 'finished'
[2025-12-01 02:47:45] 2025-12-01 01:46:58,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 02:47:45] 2025-12-01 01:46:58,171 | INFO     | time since job start (86231s) is within the limit (172800.0s)
[2025-12-01 02:47:45] 2025-12-01 01:47:00,178 | INFO     | time since job start (86233s) is within the limit (172800.0s)
[2025-12-01 02:47:45] 2025-12-01 01:47:00,643 | INFO     | monitor loop #5802: job 0:6894259250 is in state 'finished'
[2025-12-01 02:47:45] 2025-12-01 01:47:00,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 02:47:45] 2025-12-01 01:47:02,186 | INFO     | time since job start (86235s) is within the limit (172800.0s)
[2025-12-01 02:47:45] 2025-12-01 01:47:03,151 | INFO     | monitor loop #5803: job 0:6894259250 is in state 'finished'
[2025-12-01 02:47:45] 2025-12-01 01:47:03,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 02:47:45] 2025-12-01 01:47:04,193 | INFO     | time since job start (86237s) is within the limit (172800.0s)
[2025-12-01 02:47:45] 2025-12-01 01:47:05,657 | INFO     | monitor loop #5804: job 0:6894259250 is in state 'finished'
[2025-12-01 02:47:45] 2025-12-01 01:47:05,657 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 02:47:45] 2025-12-01 01:47:06,202 | INFO     | time since job start (86239s) is within the limit (172800.0s)
[2025-12-01 02:47:45] 2025-12-01 01:47:08,167 | INFO     | monitor loop #5805: job 0:6894259250 is in state 'finished'
[2025-12-01 02:47:45] 2025-12-01 01:47:08,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 02:47:45] 2025-12-01 01:47:08,209 | INFO     | time since job start (86241s) is within the limit (172800.0s)
[2025-12-01 02:47:45] 2025-12-01 01:47:08,313 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-01 02:47:45] 2025-12-01 01:47:08,314 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-01 02:47:45] 2025-12-01 01:47:08,315 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6894259250/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 02:47:45] 2025-12-01 01:47:08,316 | INFO     | extracted standard info from prmon json
[2025-12-01 02:47:45] 2025-12-01 01:47:08,316 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 02:47:45] 2025-12-01 01:47:08,316 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 02:47:45] 2025-12-01 01:47:08,345 | INFO     | fitting pss+swap vs Time
[2025-12-01 02:47:45] 2025-12-01 01:47:08,348 | INFO     | sum of square deviations: 856349328295.9636
[2025-12-01 02:47:45] 2025-12-01 01:47:08,416 | INFO     | sum of deviations: 3149086534671.7583
[2025-12-01 02:47:45] 2025-12-01 01:47:08,416 | INFO     | mean x: 1764510645.1069138
[2025-12-01 02:47:45] 2025-12-01 01:47:08,416 | INFO     | mean y: 2840162.8282252317
[2025-12-01 02:47:45] 2025-12-01 01:47:08,416 | INFO     | intersect: -6485863137.550542
[2025-12-01 02:47:45] 2025-12-01 01:47:08,418 | INFO     | chi2: 23.86482065709437
[2025-12-01 02:47:45] 2025-12-01 01:47:08,420 | INFO     | sum of square deviations: 847226830902.3145
[2025-12-01 02:47:45] 2025-12-01 01:47:08,474 | INFO     | sum of deviations: 3612068386867.2314
[2025-12-01 02:47:45] 2025-12-01 01:47:08,474 | INFO     | mean x: 1764510492.6108727
[2025-12-01 02:47:45] 2025-12-01 01:47:08,475 | INFO     | mean y: 2847901.366237482
[2025-12-01 02:47:45] 2025-12-01 01:47:08,475 | INFO     | intersect: -7519969290.184828
[2025-12-01 02:47:45] 2025-12-01 01:47:08,476 | INFO     | chi2: 20.637561972978638
[2025-12-01 02:47:45] 2025-12-01 01:47:08,477 | INFO     | current chi2=20.637561972978638 (change=13.523079559185183 %)
[2025-12-01 02:47:45] 2025-12-01 01:47:08,477 | INFO     | right removable region: 1397
[2025-12-01 02:47:45] 2025-12-01 01:47:08,479 | INFO     | sum of square deviations: 847225883572.3145
[2025-12-01 02:47:45] 2025-12-01 01:47:08,568 | INFO     | sum of deviations: 2551254751561.9043
[2025-12-01 02:47:45] 2025-12-01 01:47:08,569 | INFO     | mean x: 1764510797.6108727
[2025-12-01 02:47:45] 2025-12-01 01:47:08,569 | INFO     | mean y: 2850155.558655222
[2025-12-01 02:47:45] 2025-12-01 01:47:08,569 | INFO     | intersect: -5310628391.160915
[2025-12-01 02:47:45] 2025-12-01 01:47:08,571 | INFO     | chi2: 19.01861148665047
[2025-12-01 02:47:45] 2025-12-01 01:47:08,571 | INFO     | current chi2=19.01861148665047 (change=20.30691636060232 %)
[2025-12-01 02:47:45] 2025-12-01 01:47:08,571 | INFO     | left removable region: 10
[2025-12-01 02:47:45] 2025-12-01 01:47:08,573 | INFO     | sum of square deviations: 827384000680.1318
[2025-12-01 02:47:45] 2025-12-01 01:47:08,630 | INFO     | sum of deviations: 2592132740285.309
[2025-12-01 02:47:45] 2025-12-01 01:47:08,631 | INFO     | mean x: 1764510767.1196828
[2025-12-01 02:47:45] 2025-12-01 01:47:08,631 | INFO     | mean y: 2868515.805335256
[2025-12-01 02:47:45] 2025-12-01 01:47:08,631 | INFO     | intersect: -5525212914.675617
[2025-12-01 02:47:45] 2025-12-01 01:47:08,633 | INFO     | chi2: 11.40751704959249
[2025-12-01 02:47:45] 2025-12-01 01:47:08,633 | INFO     | current memory leak: 3.13 B/s (using 1387 data points, chi2=11.41)
[2025-12-01 02:47:45] 2025-12-01 01:47:08,634 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-12-01 02:47:45] 2025-12-01 01:47:08,634 | INFO     | ..............................
[2025-12-01 02:47:45] 2025-12-01 01:47:08,634 | INFO     | . Timing measurements:
[2025-12-01 02:47:45] 2025-12-01 01:47:08,634 | INFO     | . get job = 0 s
[2025-12-01 02:47:45] 2025-12-01 01:47:08,634 | INFO     | . initial setup = 9 s
[2025-12-01 02:47:45] 2025-12-01 01:47:08,635 | INFO     | . payload setup = 155 s
[2025-12-01 02:47:45] 2025-12-01 01:47:08,635 | INFO     | . stage-in = 0 s
[2025-12-01 02:47:45] 2025-12-01 01:47:08,635 | INFO     | . payload execution = 85696 s
[2025-12-01 02:47:45] 2025-12-01 01:47:08,635 | INFO     | . stage-out = 102 s
[2025-12-01 02:47:45] 2025-12-01 01:47:08,635 | INFO     | . log creation = 2 s
[2025-12-01 02:47:45] 2025-12-01 01:47:08,635 | INFO     | ..............................
[2025-12-01 02:47:45] 2025-12-01 01:47:08,809 | INFO     | 
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | job summary report
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | --------------------------------------------------
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | PanDA job id: 6894259250
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | task id: 47533967
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | errors: (none)
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | pilot state: finished 
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | transexitcode: 0
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | exeerrorcode: 0
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | exeerrordiag: 
[2025-12-01 02:47:45] 2025-12-01 01:47:08,810 | INFO     | exitcode: 0
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | exitmsg: OK
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | cpuconsumptiontime: 322389 s
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | nevents: 1000
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | neventsw: 0
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | pid: 21932
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | pgrp: 21932
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | corecount: 8
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | event service: False
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | sizes: {0: 2284088, 1: 2284343, 2: 2284343, 12: 2284371, 23: 2284399, 34: 2284427, 44: 2284583, 55: 2284611, 66: 2284639, 77: 2284667, 87: 2284723, 88: 2285293, 98
[2025-12-01 02:47:45] 2025-12-01 01:47:08,811 | INFO     | --------------------------------------------------
[2025-12-01 02:47:45] 2025-12-01 01:47:08,812 | INFO     | 
[2025-12-01 02:47:45] 2025-12-01 01:47:08,812 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-12-01 02:47:45] 2025-12-01 01:47:09,569 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,570 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 02:47:45] 2025-12-01 01:47:09,571 | INFO     | job 6894259250 has completed (purged errors)
[2025-12-01 02:47:45] 2025-12-01 01:47:09,572 | INFO     | overall cleanup function is called
[2025-12-01 02:47:45] 2025-12-01 01:47:10,587 | INFO     | --- collectZombieJob: --- 10, [21932]
[2025-12-01 02:47:45] 2025-12-01 01:47:10,587 | INFO     | zombie collector waiting for pid 21932
[2025-12-01 02:47:45] 2025-12-01 01:47:10,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 02:47:45] 2025-12-01 01:47:10,587 | INFO     | collected zombie processes
[2025-12-01 02:47:45] 2025-12-01 01:47:10,587 | INFO     | will attempt to kill all subprocesses of pid=21932
[2025-12-01 02:47:45] 2025-12-01 01:47:10,696 | INFO     | process IDs to be killed: [21932] (in reverse order)
[2025-12-01 02:47:45] 2025-12-01 01:47:11,380 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 02:47:45] 2025-12-01 01:47:11,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 02:47:45] 2025-12-01 01:47:11,384 | INFO     | did not find any defunct processes belonging to 21932
[2025-12-01 02:47:45] 2025-12-01 01:47:11,387 | INFO     | did not find any defunct processes belonging to 21932
[2025-12-01 02:47:45] 2025-12-01 01:47:11,406 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 02:47:45] 2025-12-01 01:47:11,406 | INFO     | ready for new job
[2025-12-01 02:47:45] 2025-12-01 01:47:11,407 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 02:47:45] 2025-12-01 01:47:11,412 | INFO     | ***************************************
[2025-12-01 02:47:45] 2025-12-01 01:47:11,412 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 02:47:45] 2025-12-01 01:47:11,412 | INFO     | ***************************************
[2025-12-01 02:47:45] 2025-12-01 01:47:11,412 | INFO     | 
[2025-12-01 02:47:45] 2025-12-01 01:47:11,413 | INFO     | pilot is running in a VM
[2025-12-01 02:47:45] 2025-12-01 01:47:11,413 | INFO     | architecture information:
[2025-12-01 02:47:45] 2025-12-01 01:47:11,422 | INFO     | executing command: cat /etc/os-release
[2025-12-01 02:47:45] 2025-12-01 01:47:11,592 | INFO     | cat /etc/os-release:
[2025-12-01 02:47:45] NAME="CentOS Linux"
[2025-12-01 02:47:45] VERSION="7 (Core)"
[2025-12-01 02:47:45] ID="centos"
[2025-12-01 02:47:45] ID_LIKE="rhel fedora"
[2025-12-01 02:47:45] VERSION_ID="7"
[2025-12-01 02:47:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 02:47:45] ANSI_COLOR="0;31"
[2025-12-01 02:47:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 02:47:45] HOME_URL="https://www.centos.org/"
[2025-12-01 02:47:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 02:47:45] 
[2025-12-01 02:47:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 02:47:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 02:47:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 02:47:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 02:47:45] 
[2025-12-01 02:47:45] 2025-12-01 01:47:11,593 | INFO     | ***************************************
[2025-12-01 02:47:45] 2025-12-01 01:47:12,096 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-12-01 02:47:45] 2025-12-01 01:47:12,252 | INFO     | sufficient remaining disk space (487706329088 B)
[2025-12-01 02:47:45] 2025-12-01 01:47:12,252 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 02:47:45] 2025-12-01 01:47:12,252 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 02:47:45] 2025-12-01 01:47:12,252 | INFO     | update_server=False
[2025-12-01 02:47:45] 2025-12-01 01:47:12,252 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 02:47:45] 2025-12-01 01:47:12,253 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 02:47:45] 2025-12-01 01:47:12,256 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 02:47:45] 2025-12-01 01:47:12,256 | INFO     | aborting loop
[2025-12-01 02:47:45] 2025-12-01 01:47:12,972 | INFO     | all payload control threads have been joined
[2025-12-01 02:47:45] 2025-12-01 01:47:13,009 | INFO     | all data control threads have been joined
[2025-12-01 02:47:45] 2025-12-01 01:47:13,258 | INFO     | [job] retrieve thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:13,262 | INFO     | [job] job monitor thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:13,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:13,424 | INFO     | all job control threads have been joined
[2025-12-01 02:47:45] 2025-12-01 01:47:13,429 | INFO     | [job] validate thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:13,758 | INFO     | [data] copytool_in thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:13,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 02:47:45] 2025-12-01 01:47:13,930 | INFO     | [payload] validate_post thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:13,978 | INFO     | [payload] control thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:14,015 | INFO     | [data] control thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:14,164 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:14,180 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:14,220 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:14,260 | INFO     | [data] copytool_out thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:14,323 | INFO     | [payload] failed_post thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:14,430 | INFO     | [job] control thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:14,830 | INFO     | [job] queue monitor thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:15,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 02:47:45] 2025-12-01 01:47:17,004 | INFO     | [monitor] cgroup control has ended
[2025-12-01 02:47:45] 2025-12-01 01:47:19,756 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 02:47:45] 2025-12-01 01:47:20,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140538979366720)>', '<ExcThread(monitor, started 140538166634240)>']
[2025-12-01 02:47:45] 2025-12-01 01:47:25,659 | INFO     | all workflow threads have been joined
[2025-12-01 02:47:45] 2025-12-01 01:47:25,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 02:47:45] 2025-12-01 01:47:25,659 | INFO     | traces error code: 0
[2025-12-01 02:47:45] 2025-12-01 01:47:25,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 02:47:45] 2025-12-01 01:47:41,362 | INFO     | PID=15284 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 02:47:45] 2025-12-01 01:47:41,362 | INFO     | .. there are 9 such processes running
[2025-12-01 02:47:45] 2025-12-01 01:47:41,362 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 02:47:45] 2025-12-01 01:47:41,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 02:47:45] 2025-12-01 01:47:41,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 02:47:45] 2025-12-01 01:47:41,363 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 02:47:45] 2025-12-01 01:47:41,363 | INFO     | [monitor] control thread has ended
[2025-12-01 02:47:45] 2025-12-01 01:47:41,746 [wrapper] ==== pilot stdout END ====
[2025-12-01 02:47:45] 2025-12-01 01:47:41,807 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 02:47:45] 2025-12-01 01:47:41,892 [wrapper] pilotpid: 15284
[2025-12-01 02:47:45] 2025-12-01 01:47:41,953 [wrapper] Pilot exit status: 0
[2025-12-01 02:47:45] 2025-12-01 01:47:42,405 [wrapper] pandaids: 6894259250
[2025-12-01 02:47:45] 2025-12-01 01:47:42,907 [wrapper] cleanup supervisor_pilot  1603 15285
[2025-12-01 02:47:45] 2025-12-01 01:47:43,031 [wrapper] Test setup, not cleaning
[2025-12-01 02:47:45] 2025-12-01 01:47:43,139 [wrapper] apfmon messages muted
[2025-12-01 02:47:45] 2025-12-01 01:47:43,195 [wrapper] ==== wrapper stdout END ====
[2025-12-01 02:47:45] 2025-12-01 01:47:43,287 [wrapper] ==== wrapper stderr END ====
[2025-12-01 02:47:45]  *** Error codes and diagnostics ***
[2025-12-01 02:47:45]     "exeErrorCode": 0,
[2025-12-01 02:47:45]     "exeErrorDiag": "",
[2025-12-01 02:47:45]     "pilotErrorCode": 0,
[2025-12-01 02:47:45]     "pilotErrorDiag": "",
[2025-12-01 02:47:45]  *** Listing of results directory ***
[2025-12-01 02:47:45] total 1337852
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc    576529 Nov 21 05:12 pilot3.tar.gz
[2025-12-01 02:47:45] -rwx------. 1 boinc boinc     36292 Nov 21 05:18 runpilot2-wrapper.sh
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc      5112 Nov 21 05:18 queuedata.json
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc       100 Nov 30 02:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 02:47:45] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 02:45 run_atlas
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc       105 Nov 30 02:45 job.xml
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc      6392 Nov 30 02:45 init_data.xml
[2025-12-01 02:47:45] -rw-r--r--. 2 boinc boinc 410759611 Nov 30 02:45 EVNT.47493127._002183.pool.root.1
[2025-12-01 02:47:45] -rw-r--r--. 2 boinc boinc     15847 Nov 30 02:45 start_atlas.sh
[2025-12-01 02:47:45] drwxrwx--x. 2 boinc boinc        68 Nov 30 02:45 shared
[2025-12-01 02:47:45] -rw-r--r--. 2 boinc boinc    590097 Nov 30 02:45 input.tar.gz
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc         0 Nov 30 02:45 boinc_lockfile
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc      2785 Nov 30 02:46 pandaJob.out
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc    991828 Nov 30 02:49 agis_schedconf.cvmfs.json
[2025-12-01 02:47:45] drwx------. 5 boinc boinc      4096 Nov 30 02:49 pilot3
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc       533 Dec  1 02:18 boinc_task_state.xml
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc 927297169 Dec  1 02:42 HITS.47533967._001549.pool.root.1
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc      1031 Dec  1 02:43 memory_monitor_summary.json
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc   1516240 Dec  1 02:43 agis_ddmendpoints.agis.ALL.json
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc   2483813 Dec  1 02:45 log.47533967._001549.job.log.tgz.1
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc        95 Dec  1 02:46 pilot_heartbeat.json
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc      8628 Dec  1 02:47 heartbeat.json
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc        29 Dec  1 02:47 wrapper_checkpoint.txt
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc      8192 Dec  1 02:47 boinc_mmap_file
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc       820 Dec  1 02:47 pilotlog.txt
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc  11515129 Dec  1 02:47 log.47533967._001549.job.log.1
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc       353 Dec  1 02:47 output.list
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc       620 Dec  1 02:47 runtime_log
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc  14018560 Dec  1 02:47 result.tar.gz
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc       662 Dec  1 02:47 Z0TKDmVmXg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV0IKDmuxvkSm.diag
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc      8833 Dec  1 02:47 runtime_log.err
[2025-12-01 02:47:45] -rw-r--r--. 1 boinc boinc     21447 Dec  1 02:47 stderr.txt
[2025-12-01 02:47:45] HITS file was successfully produced:
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc 927297169 Dec  1 02:42 shared/HITS.pool.root.1
[2025-12-01 02:47:45]  *** Contents of shared directory: ***
[2025-12-01 02:47:45] total 1320988
[2025-12-01 02:47:45] -rw-r--r--. 2 boinc boinc 410759611 Nov 30 02:45 ATLAS.root_0
[2025-12-01 02:47:45] -rw-r--r--. 2 boinc boinc     15847 Nov 30 02:45 start_atlas.sh
[2025-12-01 02:47:45] -rw-r--r--. 2 boinc boinc    590097 Nov 30 02:45 input.tar.gz
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc 927297169 Dec  1 02:42 HITS.pool.root.1
[2025-12-01 02:47:45] -rw-------. 1 boinc boinc  14018560 Dec  1 02:47 result.tar.gz
02:47:46 (11493): run_atlas exited; CPU time 323019.085764
02:47:46 (11493): called boinc_finish(0)

</stderr_txt>
]]>

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